>input_sequence_74173
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--------------------------------------------------------------ATGGCAACAATGGCGCCG
ACCTCCATCGTCTTCTCCGTGGTCGTCTTCCTGCTCCTTTCCAATGCCATCACCACTCAAGCCGGCGGCTCTGGCAGTGG
CAAACCTAAGGCAACAAGCCTCATAGTGGAAGCGTGCAAGAACGCCTCAGGCGAGAGCCAAGACACCGGTGTCACAAAGG
AATTCTGTTTGTCGACCCTCCAGTTGGACAGTCGGAGCGCCAAGGCTAAAGACCTCTGTGACTTGGTGGTCATCTCGATT
GACATCCTGAAGGGCCGTGTCAGTGATGCTGGCGTCAAGGTAAAGAAAATGCTGCAAAACGCC-AAGAAAGGCACGCTGA
CAATGTATGCTCTCAGCATTTGTGAGTTGCAATATGAGAAGGTGGTGAGCACGCTCAACGTCTGCCAAGCTATGATTAGG
GATCACCAAGGTGACAAGGGCGACCTGAAGTCATTGGGTCTACTCCATTGTGTGGATATGACCGGTGAGACAATCAAAGA
GTGCGAAAATGAGCTTGGAGATGTGCGAGGGGCGGAGGCGCTGCTTCGTGAAAACGAGGGGTTGCGCATTCTGGCCAACC
TAAACAGAGCCTTGGTTGCACCGTATGATGTCTAA---------------------------------------------
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>chr5D_1_TraesCS5D01G561900
GTATCTGCAAATTAGATGTCTATTCTAGG-AGAAGATCTAAAATGAGCATATGTGTATTTATGGAATATAGAGAGCATTA
ATACCATGAGCTACAAAACGAGCACCACTATATCCTAGTGCATTCTATGGGCACTCAACATTTGGATATCCATGATCAAG
CTATGTTGCAATCATGAATCTATGAATGAGATCCATGTTATATGTTAGACTTCGACGTTGTGTTGCATTAATGAATCTAT
GTATGAGACCAATCTTGGATATGCATGATCAAGTTGTGTTGCATTAATGAGTCTC--GATGTTATATGTGTTACTATGAG
AAGATCTAAAATGAGTATCTATGTATTTGTGGAACATAGAGAGCGTTAATACGACGAGATCCGAAATGAGCACCTATATA
TCCGTGTGCATTCTACAGACATTCATCATTTAGATATCACTGATCGGGCTA-----------------------------
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--------------------------------------------------------CATTAATGAATCTGTGGATGAGAT
CCATCTTGGATATCCATGTTCAAGTTTTGTTGCAGTAATGAGTCTAT----GGATGCTAGATGTGTTACTATGAAAAGAT
CTAAAATGAGCATTTGTGTATTTGTGGAACATAGAGAGCATTAATACAATGAGTTCCAAAATGAGCACCAGTATATCCAT
GTGCATTCCACTGACACTCATCATTTGGATATCCATGATCAAGCAATGTTACATTAAAGAATATGTGGAAGCTACATGTG
TATTAAAAAAG--AAAATCTGAAATGAGCATCAATTGTATTTGTGAATATAAAGGGCATTATTACCAGGAGGTGGAAAAT
GTGCACAGGTTGGACACTAATTAATATGCATATCTGTGATCGACCGGCATACTGCATTTATGAATTCTCAGTGCACGCAC
TATAAATAAAACTCAACTTCATGAACACCTC--------CATCCATCCATCTCTACAATACACATCCTTCTCTATCCATT
TCACTCCATCTCCCTCTGCTTCAATATAGTTAAAGGTTTCTATCTTAGCTAGCCTTCTAGCAATGGCAACAATGGCGCCG
ACCTCCATCGTCTTCTCCGTGGTCGTCTTCCTGCTCCTTTCCAATGCCATCACCACTCAAGCCGGCGGCTCTGGCAGTGG
CAAACCTAAGGCAACAAGCCTCATAGTGGAAGCGTGCAAGAACGCCTCAGGCGAGAGCCAAGACACCGGTGTCACAAAGG
AATTCTGTTTGTCGACCCTCCAGTTGGACAGTCGGAGCGCCAAGGCTAAAGACCTCTGTGACTTGGTGGTCATCTCGATT
GACATCCTGAAGGGCCGTGTCAGTGATGCTGGCGTCAAGGTAAAGAAAATGCTGCAAAACGCC-AAGAAAGGCACGCTGA
CAATGTATGCTCTCAGCATTTGTGAGTTGCAATATGAGAAGGTGGTGAGCACGCTCAACGTCTGCCAAGCTATGATTAGG
GATCACCAAGGTGACAAGGGCGACCTGAAGTCATTGGGTCTACTCCATTGTGTGGATATGACCGGTGAGACAATCAAAGA
GTGCGAAAATGAGCTTGGAGATGTGCGAGGGGCGGAGGCGCTGCTTCGTGAAAACGAGGGGTTGCGCATTCTGGCCAACC
TAAACAGAGCCTTGGTTGCACCGTATGATGTCTAATGTTTGTGTTTTATCTGCTTGAAAGGGATGTAGATCGATGTGACA
TCGGTTTTACTGTTATTTGAAATAATAATCACAATGTTTCTTCTGGCACAAATTTTACTGCTCACTCGTCTTTTCTGCTT
CGAAGGCTAACAATTAATGCGACTGCTGGTTCACTTGGTGTGTCACCTGTTAATTAGAACCTGAGCGAGTATTTTGTGAG
GGAGATTTGTGCAATATAGGTACTTTCTGTATTGATGATCGAGTGATTACTCTCTTTTTCTTTTTTGAGGACAAAAGATT
AACAAACTACTCTTAAGTCTTAAGCAAGCTCAATAAGTTAATTTAGAGAGTGCGTGGGCAAGATTGACGTGCATGCATGT
TAATAAGGTTTTGCCCAAGCAAACTCTTCACTTCACTGCTAGTATAATTTTGTCTACTGCTAGAGTTCCATGGACATGCA
TGCAGATGGGAGCCCGCAGCTGATTAGCTCCTGTCCTCCTCGTACTTAAGAAAAAGGAGGGATCGGCTGATGAACTCCTT
TCCTGCATTGTGACTTGACTCCAATCGTGGATCTAGTAGGAACCAGCACCGCCGCAGCAGCAACAGCAACAGCATTTTTT
GTCCTAGACTTTGGGTTACACCAGTATTTCTAAAATAAAAATGTGCCCTGGCGACTCCTCTGTTCTAATATATACGCTGG
TAATTTATTTATTTATTTACTTTTTACTCTAGTAGTCAATAACAGCAGGGGAATTAAATATCAACTGGAGGGAGTATATT
CATTGTGCATGTCGTCTTTAAACAGGCAGGTTTGAGAGAGTTTCTATCCTTCCTGTGCTTGGTTCCACACTCTGCACATA
ATCATCTTATACTAGTAACTGAATTACGTACTGTAACAAATCAAGTAGACAAACAAACAGCTGTTAACACCGAATTTAAA
TCTCACAACGTGTATCCATATATATGCCTATTAACCTTCAACAAATACTCCTAGTTACCAAGGATCATCGATCAA
>chr5D_1
GTATCTCGAAGTTAGATGTGTATTACTACAAGAAGATCTAAAATGAGCATATGTGTATTTATGGAACATAG-----ATTG
ATACAATGACATCCAAAATGAGCACCAATATACCCTTGTGTATTCTACGGACAATCATCATTTGGATATAAATGATCAAG
CTATGTCACATTAATGAATCT--GGATGAGATCCATGTTAGATGTTAGAT------GTTGTGTTGCATTAATGAATCTAT
GGATGATATCCATCTTGGATATCCATGATCAAGTTGTGTTGCATTAATGAGTCTATGGATGTTATATATGTTACTATGTG
AAGATCTAAAATAAGTATATGTGTATTTGTGGAACACAGTGAGTATTAATACGATGAGATCCAAAATGAGCACTCATATA
TCCTTGTGCATTCTACGGTCACTCATCATCTGGATATCCATTATCAAGCTATATTTCAT-AAGAGCAGTGCTATACACAC
GATAGTGTGCAGACGATGTGTGCACGACAATGCAACCAGCTCCGTCCATTGCATGGCAACAGTAGGCAGCAGGCCGCTAG
ATGCTTATCGTGTAGTGGTCGTGCACATATTTGTCGTCTGCAAAGTAGTTCCGTTTCATTAGTGAATCTATGGATGAGAT
CCATATTGGATATCCATCTTCAAGTTATGTTGCATTAATGAGTCTAT----GGATGTTAGATGTGTTACTATGAGAAGAT
CTAAAATGAGCATTTGTGTATTTGTGGAACATAGAGAGCATTAATCTGATGAGATACAAAATGAGCACCAGTATATCCTT
GTGCATTCTACGGACACTCATCATTTGGATATTCATGATCAAGCTATGTTACATTAAAGAATCTATGGAAGCAACATGTG
TATTAATAAAAGTAAAATCTGAAATGTGCATCAATTGTATTTATGAATATAAAGGGCATTATTAGCCGGAGGTGCAAAAT
GTGCACAGACTGGACACTAATTAATATGCATATCCATGATCAAGCGGCATACTTCATTTATGAATTCTCATTGCACGCAC
TATAAATAAAACTCAACCTCACGAACACCTC--------CAT----CCATCTCTACAATACACACCCTTCTCTATCCATT
TCACTCTATCTCCCTCTGCTTAAGGACAGTTCAAGGCTTGTAT-----CTAGCCTTCTAGCAATGGCAATAATGCCGCCG
ACCTCCATCTTCTTCTCCGTGATCGTCTTCATGCTCCTTTCCAATGCCATTACTACTCAAGCCGGTGGCTCTGGTGGTGG
CAAACCTAAGGCAACAAGCCTCGTAGTGGAAGCGTGCAAGAACGCTTCGGGCGAGACCCAAGACCCCGATGTCACAAAGG
AATTCTGTTTGTCGACCCTCCAGTCGGACAAGCGGAGCGCCGAGGCTAAAGACCTCCCTGGCTTGGTGCTCGTCTCCATC
GACATCCTTAAGGGCCGTGTCACTGATGCTAGTGTCAAGGTCAAGAAAATGCTACGAAACGCC-AAAAAAGGCACAATGG
CGATGCACGCTCTCAGTATTTGTGAGCTGCAATATGAGAACGTGGTGAGCACGCTCAACATCTGCCAAGCCATGATTAAG
GATCACCAAGGTGACAAGGGCATCCTGCAGTCCTTGCGTCTGCCCCACTGTGTGGATATCGCCTGCGACACTTCCAACGA
GTGCCAAACTGATCTTGAAGATGTGCCAGGGACGGAGGCGCTGCAAATTGATAACGAGAGGCTGCGCATTCTGTTCAACC
TCAACGCCGCCTTGGTTGTACCATATGATGTC------------------------------------------------
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>chr7B_1
GTATCTGGAAGTTAGATGTGTATTACTACAAGAAGATCTAAAATGAGCATATGTGTATTTATGGAACATAG-----ATTG
ATACAATGACATCCAAAATGAGCACCAATATACCCTTGTGTATTCTACGGACAATCATCATTTGGATATCAATGATCAAG
CTATGTCACATTAATGAATCTATGGATGAGATCCATGTTAGATGTTAGAT------GTTGTGTTGCATTAATGAATCTAT
GGATGATATCCATCTTGGATATCCATGATCAAGTTGTGTTGCATCAATGAGTCTATAGATGTTATATGTGTTACTATGTG
AAGATCTAAAATAAGTATATGTGTATTTGTGGAACACAGTGAGCATTAATACGATGAGATCCAAAATGAGCATTGATATA
TCCTTGTGCATTCTACGGACACTCATCATCTGGATATCCATTATCAAGCTATATTTCATTAAGAGCAGTGCTATACACAC
GATAGTGTGCAGACGATGTGTGCACGACAATGCAATCAGCTCCGTCCATTGCATGGCAACAGTAGGCAGCAGGCCGCTAG
ATGCTTATCGTGCAGTGGTCGTGCACATATTTGTCATCTGCAAAGTGGTTCCGTTTCACTAATGAATCTATGGATGAGAT
CCATATTAGATATCCATCTTCAAGTTATGTTGCATTAATGAGTCTAT----AGATGTTAGATGTGTTACTATGAGAAGAT
CTAAAATGAGCATTTGTGTATTTGTGGAACATAGAGAGCATTAACCTGATGAGATACAAAATGAGCACCAGTATATCCTT
GTGCATTCTACGGACACTCATCATTTGGATATCCATGATCAAGCTATGTTACATTAAAGAATCTATGGAAGCAACATGTG
TATTAATAAAAGTAAAATCTGAAATGTGCATCAATTGTATTTATGAATATAAAGGGCATTATTAGCCGGAGGTGCAAAAT
GTGCACAGACTGGACACTAATTAATATGCGTATCCATGATCAAGCGGCATACTTCATTTATGAATTCTCACTGCACGCAC
TATAAATAAAACTCAACCTCACGAACACCTCCATCCATCCAT----CCATCTCTACAATACACACCCTTCTCTATCCATT
TCACTCTATCTCCCTCTGCTTAAGGACAGTTCAAGG---GTAT-----CTAGCCTTCTAACAATGGCAATAATGTCGCCG
ACCTCCATCTTCTTCTCTGTGATCGTCTTCATGCTCCTTTCCAATGCCATTACTACTCAAGCCGGTGGCTCTGGCAGTGG
AAAACCTAAGGCAACAAGCCTCATAGTGGAAGCGTGCAAGAACGCTTCGGGTGAGACCCAAGACCCCGATGTCACAAAGG
AATTCTGTTTGTCGACCCTCCAATCGGACAAGCGGAGTGCCGAGGCTAAAGACCTCCCTGGCTTGGTGCTCGTCTCCATC
GACATCCTTAAGGGCCGTGTCACTGATGCTAGTGTCAAGGTCAAGAAAATGCTACAAAACGCAAAAAAAAGGCACACTGG
TGATGTACGCTCTCAGTATTTGTGAGCTGCAATATGAGAACGTGGTGAGCACGCTCAACATCTGCCAAGCCATGATTAAG
GATCACCAAGGTGACAAGGGCATCCTGCACTCCTTGCGTCTGCCCCACTGTGTGGATATCGCCGGCGACACTTCCGACGA
GTGCCAAACTGATCTTGAAGATGTGCCAGGGACGGAGGCGCTGCAAACTGATAACGAGAGGCTGCGCATTCTGTTCAACC
TCAACACCGCCTTGGTTGTACCATATGATGTC------------------------------------------------
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>chr5B_1
GTATCTGGAAGTTAGATGTGTATTACTACAAGAAGATCTAAAATGAGCATATGTGTATTTATGGAACATAG-----ATTG
ATACAATGACATCCAAAATGAGCACCAATATACCCTTATGTATTCTACGGACAATCATCATTTGGATATCTATGATCAAG
CTATGTCACATTAATGAATCTATGGATGAGATCCATGTTAGATGTTAGAT------GTTGTATTGCATTAATGAATCTAT
GGATGATATACATCTTGGATATCCATGATCAAGTTGTGTTGCATTAATGGGTCTATGGATGTTATATGTGTTACTATGTG
AAGATCTAAAATAAGTATATGTGTATTTGTGGAACACATTGAGCATTAATACGATGAGATCTAAAATGAGCACTGATATA
TTCTTGTGCATTCTACAGACGCTCATTATCCGGATATCCATTATCAAGCTATATTTCATTAAGACCAGTGCTATTCACAC
GATAGTGTGCAGACGATGTGTGCACGGCAATACAATCAGCTCCGTCCATTGCATGGCAACAGTAGGCAGCAGGCCGCTAG
ATGCTTATCGTGTAGTGGTCGTGCACATATTTGTCATCTGCAAAGTAGTTCCGTTTCATTGATGAATCTATGGATGAGAT
CCATATTAGATATCCATCTTCAAGTTATGTTGCATTAATGAGTCTATATATGGATGTTAGATGTGTTACTATGAGAAGAT
CTAAAATGAGCATTTGTGTATTTGTGGAACATAGAGAGCATTAATCTGATGAGATACAAAATGAGCACCAGTATATCCTT
GTGCATTCTACGGACACTCATCATTTGGATATTCATGATCAAGCTATGTTACATTAAAGAATCTATGGAATTAACATGTG
TACTAATAAAAGTAAAATCTGAAATGTT------TTGTATTTATGAATATAAAGGGCATTATTAGCCGGAGGTGCAAAAT
GTGCACAGACTGGACACTGATTAATATGTGTATCCATGATCAAGCTGCATACTTCATTTATGAATTCTCACTGCACGCAC
TATACATAAAACACAACCTCACGAACACCTCCATCCATCCAT----CCATCTCTACAATACACACCCTTCTCTATCCATT
TCACTCTATCTCCCTCTGCCTAAGGACAGTTCAAGGCTTGTAT-----CTAGCCTTCTAACAATGGCAATAATGCCGCCG
ACCTCCATCGTCTTCTCCGTGATCGTCTTCATGCTCCTTTCCAGTGCCATTACTACTCAAGCCGACGGCTCTGGCGATGG
CAAACCTAAGGCAACAAGCCTTGTAGTGGAAGTGTGCAAGAACGCCTCGGGCGAGACCCAAGACCCTGATGTCACAAAGG
AATTCTGTTTGTCGACCCTCCAGTCGGACAAGCGAAGCGCCGAGGCTAAAGACCTCCCTGGCTTGGTGCTCGTCTCCATC
GACATCCTTAAGGGCCGTGTCACTGATGCTAGTGTCAAGGTCAAGAAAATGCTACAAAACGCC-AAAAAAGGCACAGTGG
CGATGTACGCTCTCAGTATTTGTGAGCTGCAATATGAGAACGTGGTGAGCACGCTCAACATCTGCCAAGCCATGATTAAG
GATCACCAAGGTGACAAGGGCATCCTGCACTCCTTGCGTCTGCCCCACTGTGTGGATATCGCTGGCGACACTTCCAACGA
GTGCCAAACTGATCTTGAAGATGTGCCAGGGACGGAGGCGCTGCAAACTGATAACGAGAGGCTGCGCATTCTGTTCAACC
TCAACACCGCCTTGGTTGTACCATATGATGTC------------------------------------------------
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>SNPs
-------S--S--------S----SSSSS-------------------------------------S----SSSSS---S
----S----SS-S-----S--------S----S---S---S------S--S--S---S------------S---------
------SS--S-S-----------S---------------S--------SSSSSSS------------------------
-S----S-S-S-----------S-------------------------------S-----------------------S-
------------S-----S-S---------------S--S----S---------S-------S----------SS-----
---S-----------------S-------S-S------SS-S---SS---------------------------------
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---------------------------------------------------------------------S----------
----S------------S--------S-------S---------------------S-----------------S-----
---------------------------------------------SSS-----S-S----------------------S-
--------S--S--------------------------------S-----------------S-S-------S-------
------S---S---------------S---------------S---------------------S-S-------S-----
--------SS------------------------SS-----S-S---------S----------------S---------
-----------------S---S--------------------SSSS------------------S---------------
------S--------------S-SS-S----S----S--S---SSSSS---------------------S----S-----
---------------------S--------S-------------------S--S--------------------------
------------------------------------------------S-------S-------S---S-----------
------------------------S-----SS---------S--------------SS--S-------S--S----S--S
--------S-------------S-------S-S--------S-----------S------------S--------S---S
-S-----S--------S---------S-------------S------------------S----------S-------S-
---------------------SS----S----S---S----S-S---S-----------SS----S--S--SSS---S--
----S---S---S----S--------S----S------------SSSS---S------S--S-----------SS-----
-S----SS----------S---S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1014
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----------------------------------TGTGATCGACCGGCATACTG--------------------------
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>reverse_2138
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---------------------------------------------------------GCAAGATTGACGTGCATGCA---
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