>input_sequence_74160
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----------------------------ATGGCCGATCCGCGGCTCTACCCGTCGGGATC------CGGCCCTCACCGCG
ACGAATCC------ACCACCGACGGCTCCGGCCGCCGGCTCTACAACCCGTACCAGGACCTCAACATCCCCACCGCCTAC
AAGAACCTCTACGACCTCCCCACCTCCCCCGAGTTCCTCTTCCAGGAGGAGGCCCTCGTCCAGCGCCGCTCCTGGGGCGA
GAACCTCACCTACTACACCGGCGTCGGCTACCTCTCCGGCGCAGTCGCGGGCGCAGCCGTCGGCCTGCGCGAGGCCGCAC
ACGCCGCCGAGCGCGGCGACACCGCCAAGATCCGCGCCAACCGCCTCCTCAACTCGTGCGGCTCCGCCGGACGCCGCGTC
GGCAACAGGCTGGGCGTCATCGGCCTCCTCTACGCCGGCATGGAGAGCGGCATGGTCACCGCCCGGGACGGCCAGGACGA
CTGGATCAACAGCGTTGTCGCGGGGCTCGGCACAGGCGCCCTCTTCCGGGCCGCCCAGGGCCCCAGGTCCGCTGCCGTCG
CCGGCGCCGTCGGAGGGGTCCTCGCCGCCGCCGCCATGGCCGCCAAGCAGGCAGCCAAGAGATACGCGCCCGCCCGCCTT
CTGATTGATTGA--------------------------------------------------------------------
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-----------------------------------------------------------------
>chr4B_1_TraesCS4B01G399400
GGCTATCCTACGACTCAAATCCACCAAAAGAGACGTAGAACACCACCTTCTTCAAAAGTCTTCGAGGGGTACCAAACCGT
TTTGTGCCTAGTGACGAAGCGATTGAAATACTCAAGGTACACGATTAGTCCGCAAAAGCATTGTCATCAATCACCAAAAC
ACCTTAGGAATAAATATGCCCTTACACACGGTTTAATGGTATAACATTGACACACATGGCTCTCGCATCCTCACTACTAA
GTGCGTCGCCGAGAAGTACGCCATCGTGCAGTCCTTTCGACCCCATTGTGGCACCCTCTACCAAACAATGCCAAAGGCAA
TCCCCTAGCATGCGTCGACGTCAGCAATAGTCAGTGCATGGAGCCACGACAGTGCACAGCTCGTCGGGATAAGAAGTGAG
GAGGAGAGAGATAATGACACCCAAAAAA------------------GAGCACTTACATGGCAAGCGGGATACTAGAAAAC
CGGTGACATGTCAGTGGG-TTTTCCCTTCTTTCTGGTTTTGGACAATTCGTGTTCGGTATCAGAACATGAGGGACAAAAT
GTATGTAACCGAAAAAAGGATAAGGGACCAAATGTTAACCTTTTGCAAATTCGAGGGGCCAGAAATATAC-TTTTCTCTT
TAACAATTATGTAGTTTCCG------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------GGAGGTGTGCATGTGAGGTGGTA
CGGCCAGCTCACGAATAAAAGGGTCGTGACGGGTCGGT------------------------------GGTCTTGGGGCT
TGACTTGAGGGATCGGCCTAGCCTAGCACACACTCTGGCGGGTCGAAGGCCGGCCCGGCCCGGCCCGGCCCGGCCCTTTT
ATTCGCCCGTGCTG---------------CCTTTTTCACCATGGGCCTTGAGTCCA------------------------
-------GAGTCCAGACGCTTTGGCTTTGGCCTTTGGGTGTGCCCCCTCTCCACGAACGACGACTGCTGCCGAATATACT
CCGTC--------------TCCGTCCCCAAACCGAAACCCTCCACCCCTGT-CTTTCTTTCGTGCATCCCACGCCCACCT
CGCCGCCGCCGCCGCCGCCGCCGCCGCCATGGCCGATCCGCGGCTCTACCCGTCGGGATC------CGGCCCTCACCGCG
ACGAATCC------ACCACCGACGGCTCCGGCCGCCGGCTCTACAACCCGTACCAGGACCTCAACATCCCCACCGCCTAC
AAGAACCTCTACGACCTCCCCACCTCCCCCGAGTTCCTCTTCCAGGAGGAGGCCCTCGTCCAGCGCCGCTCCTGGGGCGA
GAACCTCACCTACTACACCGGCGTCGGCTACCTCTCCGGCGCAGTCGCGGGCGCAGCCGTCGGCCTGCGCGAGGCCGCAC
ACGCCGCCGAGCGCGGCGACACCGCCAAGATCCGCGCCAACCGCCTCCTCAACTCGTGCGGCTCCGCCGGACGCCGCGTC
GGCAACAGGCTGGGCGTCATCGGCCTCCTCTACGCCGGCATGGAGAGCGGCATGGTCACCGCCCGGGACGGCCAGGACGA
CTGGATCAACAGCGTTGTCGCGGGGCTCGGCACAGGCGCCCTCTTCCGGGCCGCCCAGGGCCCCAGGTCCGCTGCCGTCG
CCGGCGCCGTCGGAGGGGTCCTCGCCGCCGCCGCCATGGCCGCCAAGCAGGCAGCCAAGAGATACGCGCCCGCCCGCCTT
CTGATTGATTGATTGATTGATTGATTGATCGATGC---------------------------------------------
---------------------CCTCCTCCCGCCGCCCGGTATTAATCTC------------------------------C
TGTCATCAATTGAATCGAATCAATTGGCCAAGGATGCAGTACTAGTTTCTTG---------------GGTTAATTATTTG
AGA---------------AGGGTCATCTTCTCGACATTATTATGATATGTTA----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------AAGTGTTATGC--TATATGAAAA
CAACAACGATGCCATCGGATGGCATCGGATCAGCAAATTTTTGACATGCCTTGTTGCAATG----TAACATCATCTTCTT
----TCTTCATCACTACTACTACTTGGTTAGCGACCTAGATAGATTGTCGTGGGTGTCAGACTCA---------------
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-------------------------------------------------------------------------------A
TAATGCTGGAGAGTCGAGGAAATCGTGGAATGTAATGTTCATTGCATGCTACTCCCTCTGTTTCTAAAAAAATACAAGTC
TTTTTAGATATTTCAATATGGAATGTAATGTTCATTATATTCACT--------------------------------CAT
TTTGCACCGTATGTAGTCCATATTGAAATCTCTAAAAAGACTTGTATTTAGAAATTATCGTGGTGCTTGCTTTGCTTCAT
GTCTGATGAAAA---TATTTTGCCGTAGAATGGCAGGTTAATTGGGTATTTCTCTTATCTTTCTGCTCATGTTATTCTTC
TTGAATGCCACACTGCTATTTCAAGAATTAACTAGACTTGATGAAAAAGTTGAGCTTTTTGCATTCTACTACTCACACTG
C-----GTTCTACTTGTGT-CCTTTTCTCATCTTTCTGCACATGTTATTATTGTTACGGAACGCTATACTGCTATTTCAA
GTAACTAGACTAGAGTTGATGAGAAACTTGAGCCTTTTTGCATTCTGATAATTTAACAACAATGCATTAATTGCTACTCA
CAATGGAATGCT--------------------------------------------------------------------
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--------------------------------------------------------------CTTATCCCTATTTCCTTT
ATACAGTTATA-------TGCCTATTCCATTCGACCTAGCTGGTGGGTGTCAGACTCAATAATATGTTTGTGTGCGTTTA
CATTATGCTGGAGTGGAGAGTCCAGGACATTGTGGAATGTAGTAATGTTCATTGTAGAGTAATTT
>chr5A_187
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--------------------------CACGGTTTAATGGCATAACATCGACACACATGGCTCTGGCATCCTCACTACCAA
GTGTGTCACCGAGAAGTATGCCGTCAGGCAGTCCTTTCGACCCCGTTGTGGCACCCTTTACCGAACAATGAC--AGGCAA
TCCCCTAGCATGCATCGACGTCAGCAACAGTCAATGCATGGAGCCACGGTAGTGCACGGCTCGTCGGGATAAGAAGTAAG
GAGGAGAGAGATAATGACACCCAAAAAAAGTTCATGGCCCAAAAAAGAGCACTGGCATGGCAAGTGGGATACTAGAAAAC
CGGTGACATGTCAGTGGG-TTTCCCTC-CTTTCTGGTTTTGTACGATTCGTGTTCGGTATCAGAACATGAGGGACCAAAT
GTATGTAGCCGAAAAAAGGATAAGGGAGCAAATGTTAACTTGTTGTAAATCCGAGGGGCCAGAAATATACTTTTTCTCTT
TAACAATTATGTAGTTTCCGCGTCTTAAGATTAATCTCCATAACAGCGAGTTATTTTGTTCTTGTTTTGCCGGAATCTGG
GGATTCTCTG----------------------------------------------------------------------
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---------------------------------------------AGAATCCGACCCATACCCAGATCGGTCTTGGGGCT
TGACTTGAGGGATGG-----------------------------------------------------------------
-------------G---------------CCTTGTTCACCATGGGCCTTGAGGCCATGGTTTCCGGCGTCTCCACGAAGA
CGAAG-------------------------------------------------GAACCAACCGGCGACTTGTTTGCGGT
CCGTCCG----TCCGTCCGTCCGTCCCCAAACCCAAACCCTCCTCTCCTCCACTTTCTTTCGTGCATCCCACGCCCGCCT
-----------------CCGCCGCCGCCATGGCCGATCCGCGGCTCTACCCGTCGGGATCGGGATCCGCCCCTCACCGCG
ACGAATCCTCCACCACCACCGACGGCTCCGGCCGCCGGCTCTACGACCCGTACCAGGACCTCAACATCCCCACCGCCTAC
AAGAACCTCTACGACCTCCCCACCTCCCCCGAGTTCCTCTTCCAGGAGGAGGCCCTCCTCCAGCGCCGCTCCTGGGGAGA
GAACCTCACCTACTACACCGGGGTCGGCTACCTCTCCGGCGCCGTCGCGGGCGCCGCAGTCGGCCTGCGCGAGGCCGCAC
GCGCCGCCGAGCGCGGCGACACCGCCAAGATCCGCGCCAACCGCCTCCTCAACTCGTGCGGCTCCGCCGGACGCCGCGTC
GGCAACAGGCTCGGCGTCATCGGCCTCCTCTACGCCGGCATGGAGAGCGGCATGGTCTCAGCCAGGGACGGCCACGACGA
CTGGATCAACAGCCTAGTCGCGGGGCTCGGCACCGGCGCCCTCTTCAGGGCCGCCCAGGGCCCCAGGTCTGCCGCCGTCG
CTGGCGCCCTCGGAGGGGTCCT---------CGCCATGGCCGCCAAGCAGGCAGCCAAGAGATACGCGCCCGCCTTC---
-----------------TGATTGATTCATTGATTC---------------------------------------------
---------------------CCTCCTCCTGCCGGCCGGTATTATTAATCTTAATCAATCGCTCGCTCGCTGCTCCTGTC
TGTCATCAATC-AATCGAATCAATTGGCCAAGGATCTAGTACTAGTTTCTTCGTTTATTGCTGTCAGAGTTAATTATTTG
AGA---------------AGGGTCATCTTCTCGACATTATTATGATATGTTA----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------AAGTGTTATGCTATATATGAAAA
CAACAACGATGCCATCGGTAT-CATCGGATCAGCAATTTTTTGACATGCCTTGTTGCAATGTATGTAACATCATCTTCTT
TCTCTCTTCATCACTACTACTACTTGGTTAGCGACCTAGATAGATTGTCGTGGGTGTCAGACTCCCTCAATAA-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CTTACA
TTATGCTGGAGAGTCGAGGAAATCATGGAATGTATTGTTCATTGCATGCTACTCCCTCTGTTTCTAAA----TACAAGTC
TTTTTAGACATT--------------------------------T--------------------------------CAT
TTTGCACCGTATGTAGTCCATATTGAAATCTCTAAAAAGACTTGTATTTAGAAATTATCGTGGTGCT---------TCAT
GTCTGATGAAATATTTATTTTGCCGCAGAATGGCAGGTTAATTGGGTATTTCTCTTATCTTTCTGCTCATGTCATTCTTC
TTGAATGCCACACTGCTATTTCAAGAATTAACTAGACTTGATGAAAAAGTTGAGCTTTTTGCATTCTACTACTCACAGTG
CCGTGCGTTCTACTTGGGTGCCTTTTCTCATCTTTCTGCACATGTTATT---GTTACGGAACGCTATACTGCTATTTCAA
GTAACTAGACTAGAGTTGATGAGAAACTTGAGCCTTTTAGCATTCTGATAGTTTAACAACAATGCGTTGCTA---ACTCA
CAATGGAATGCT--------------------------------------------------------------------
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--------------------------------------------------------------CTTATCCCTATATCCTTT
ATACAGT--TA-------TGCCTATTCCATTCGACCTAGCTGGTGGGTGTCAGACTCAATAATATGTTTGTGTGCGTTTA
CATTATGCTTGC-TGGAGAGTCCAGGACATTGTGGAATGTA---ATGTTCATTGTAGAGTAA---
>chr4D_187
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--------------------------CATGGTTTAATGGCATAACATCGACACACATGGCTCCGGCATCCTCACTACCAA
GTGTGTCGCCGAGAAGTATGTCGTCGGGCAGTCCTTTCGACCCCATTGTGGCACCCTCTACCGAACAATGACAGAGGCAA
TCCCCTAGCATGCATCGACGTCAGCAATAGTCAGTGCATGGAGCCATGGCAGTGCACGGCTCGTCGGGATAAGAAGTGAG
GAGGAGAGAGATAATGACACCCAAAAAAAATTCACGGCCCAAAAAGGAGCACTGACATGGCAAGTGGGATACTAGAAAAC
CGGTGACATGTCAGTGGGTTTTCCCTC-CTTTCTGGTTTTGGACGATTCGTGTTCGATATCAGAACATGAGGGACCAAAT
GTATGTAGCCGAAAAAAGGATAAGGGAGCAAATGTTAACTTCTTGTAAATTCGAGGGGCCAGAAATATACTTTT-CTCTT
CAACAATTATGTAGTTTCCGCGTCTTAAGATTAATTTCCA-AAGAGCAAGTTGTTTTGTTCTTCTTCCGGCGAAAAAGGT
ATGGATTGGTTAAATGGATCGCATGCACTAGAGAGCAAGTGGGTCTAGGAATTCATGATTTTGACATGAAGAATGTTGCC
TTACTTAGGAAGTATAGTTGTTTAAGCTCCTTGTTACAATTGATGGAGTATATATTCCCGTGCCTTGCCGGGGGCCAAAA
ATCGGGCTGGCCCAGCAAGCAGGGCCCATATGGCCATGTATATTCTAATTTTGACTAGTTTAGATAAGGCCCATAAGTTC
AAGGACTTGAAAACTCCAGCACAAGCCTTCAACATGGCCCATGATTCCTGGCGTGGGCTTTGCCCAGAAGAGTCGAGACG
GTTGGCTTCCCTCTCCACGAAGGAAGAGAAGTTTGGGTATTGTAATTGATAGAGCGAAAGAAGCCACATGAAGTATGATG
CCTTCTTAAACCCTAGCAGCTATGGTAATTAGCAAAGATGATTAGAGGCTTTTTGCAGGAGGTGTGCATGTGGTGTGGTA
CGGCCAGCCTGCGAATAAGACCCAATTCTTTTGCCAGAATCTGCCAGAATCCGACCCATACCCAGATCGGTCTTGGGGCT
TGACTCGAGGGATGGGCCTTG---------CACGCTGGCGGGTCGAAGGCC------------------------CTTTT
ATTCCCCCG------------------TGCCTTGTTCACCATGGGCCTTGAGGCCATGGTTTCCGGCGTGGGCTGGCACA
GAGTCCAGAGTCCAGACGCTTTGGCTTTGGCTTTGGGTTTGGCCCCCTCTCCACGAACCAACCGGCGACTTGTTTGCGGT
CCGTCAGCAGCTCCGTCCGTCCGTCCCCAAACCGAAACCCTCCTCTCCTCCACTTTCTTTCGTGCATCCCACGCCCACCT
C--CGCCGCCGCCGCCGCCGCTGCCGCCATGGCCGATCCGCGGCTCTACCCGTCGGGATC------CGCCCCTCACCGCG
ACGAATCC------ACCACCGACGGCTCCGGCCGGCGGCTCTACGACCCGTACCAGGACCTCAACATCCCCACCGCCTAC
AAGAACCTCTACGACCTCCCCACCTCCCCCGAGTTCCTCTTCCAGGAGGAGGCCCTCCTCCAGCGCCGCTCCTGGGGAGA
GAACCTCACCTACTACACCGGGGTCGGCTACCTCTCCGGCGCAGTCGCGGGAGCCGCCGTCGGCCTACGCGAGGCCGCAC
ACGCCGCCGAGCGCGGCGACACCGCCAAGATCCGCGCCAACCGCGTCCTCAACTCGTGCGGCTCCGCCGGACGCCGCGTC
GGCAACAGGCTCGGCGTCATCGGCCTCCTCTACGCCGGCATGGAGAGCGGCATGGTCACAGCCAGGGACGGCCAGGACGA
CTGGATCAACAGCGTCGTCGCCGGCCTCGGCACCGGCGCGCTCTTCCGGGCCGCCCAGGGCCCCAGGTCCGCCGCGGTCG
CCGGCGCCGTCGGTGGGGTCCTCGCCGCCGCCGCCATGGCCGCCAAGCAGGCAGCCAAGAGATACGCGCCCGCCTTC---
-----------------TGATTGATTGATTGATTCATGCCCTCCTCCTGCCGGCCGGTATTATTAATCTTAATCAATCGC
TCGCTCGCTCGCTGCTCCTGTCTGTC------------------------------------------------------
--------ATC-AATCGAATCAATTGGCCAAGGATGTAGTACTAGTTTCTTCGTTTATTGCTGTCAGAGTTAATTATTTG
AGA---------------AGGGTCATCTTCTCGACATTATTATGATATGTTA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAAGTGTTATGC--TATATGAAAA
CAAC---GATGCCATCGGTAT-CATCTGATCAGCAAATTTTTGACATGCCTTGTTGCAATG----TAACATCATCTTCTT
----TCTTCATCACTACTTA------GTTAGCGACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----CTTACA
TTATGCTGGAGAGTCCAGGAAATCGTGGAATGTAATGTTCATTGCATGGTACTCCCTCTGTTTCTAAA----TACAAGTC
TTTTTAGAGATT--------------------------------TCAATATGGGATGTAATGTTCATTATATTCACTCAT
TTTGCACCGTATGTAGTCCATATTGAAATCTCTAAAAAGACTTGCATTTAGCAATTATCGTGGTGCTTGCTTTGCTTCAT
GTCTGATGAAA----TATTTTGCCGCAGAATGGCAGGTTAATTGGGTATTTCTCTTATCTTTCTGCTGATGTTATTGTTC
TTGAATGCCACACTGCTATTTC---AATTAACTAGACTTGATGAAAAAGTTGAGCTTTTTGCATTCTACTACTCACAGTG
C-----GTTCTACTTGTGT-CCTTTTCTCATCTTTCTGCAGATGTTATT---GTTACGGAACGCTATACGGCTATTTTAA
GTAA-----CTAGAGTTGATGAGAAACTTGAGCCTTTTTGCATTCTGATAGTTTAACAACAATGCATTGCTA---ACTCA
CAATGGAATGCTCTACTGTTATTTCGAATAACTTGAATACATTGCATCCTGCTATTGAAGAATGCATTTGGATCACCGTT
ATTTTTGCACTTGTCCATATATGCTTTATCCGTTGATGATATTCTTGCCTATTTCTATCCTGGCAGCTTGCTAGTGCTGG
CATATGCATCCTAGTGTACTACTTCTTCACATGTAGGACGTTTTTGCAGATTGGTGTACATTGGCACTCTTCAGGTTCTA
TTTTA--GTGTGTGTGTTCACTCAATTTAGGTCTGTATGCTGTCCATAATAAAATATCAAAAACATGTTATATTTATGAA
CGGAGGGAGTAGATGAATTGGGTATTTCTCTGATTTTTCTGCCAATTATATTGTTACGGAACGCTATACTGCTATTTTGA
ATAACTTCAGTTGATGAAAAAGCTGAGCTTTTTGCATGCTAGTATTG-CACTGTGCATTCTACTTGGGTGCCTTTCTGAT
CCTTCCGCATATGTTATTACTACAGAGTGCTGTACTGCTAATTCTGATGACTAGAGTTGATGAGAAAC---TTGAGCCTT
TTTGCATTCTGATAATTTAACAACAATGCATCGCTACTCACAATGGAATGCTCTAGTGTTGTTTCGAATAACTTGAATTC
ATCGGAAAGTTAAACTTATTGCATTCTGCTATTGAACCATGCATCTCATAGTTATGCTTGCACTTATCCCTATATCCTTT
ATACAGTTATGATATTCTTGCCTATTCCATTCGACCTAGCTTGTGGGTGTCAGACTCAATAATATGTTTGTGTGCGTTTA
CATTATGCT-----GGAGAGTCCAGGACATTGTGGAATGTA---ATGTTCATTGTAGAGTAATTT
>chrUn_343
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----------------------AGCAATAGTCAGTGCATGGAGCCATGGCAGTGCACGGCTCATCGGGATAAGAAGTGAG
GAGGAGAGCGATAATGACACCCAAAACAAATTCACGGCCCAAAAAAGAGCACTGACATGGCAAGTGGGATACTAGAAAAC
CGGTGACATGTCAGTGGGTTTTCCCTC-CTTTCTGGTTTTGGACGATTCGTGTTCAGTATCAGATCATGAGGGACCAAAT
GTATGTAGCCGAAAAAAGG-------------------------------------------------------------
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---------------------------------------------------------ATACCCAGATCGGTCTTGGGGCT
TGACTTGAGGGATGG-----------------------------------------------------------------
-------------GCCTTGCACGCTGGTGCCTTGTTCACCATGGGCCTTGAGGCCATGGTTTCCGGCGTGGGCTGGCACA
GAGTCCAGAGTCGAGACGCTTTGGCTTCGGC-------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TCCGGCTC------CGGCTC--------
----------------------CGGCTCCGGCCGGCGGCTCTACGACCCGTACCAGGACCTCAACATTCCCACCGCCTAC
AAGAACCTCTA--------CCACCTCCCCCGAGTTCCTCTTCCAGGAGGAGGCCCTCCTCCAGTGCCGCTCCTGGGGAGA
GAACCTCACCTACTACACCGGGGTCGGCTACCTCTCCGGCGCAGTCGCGGGAGCCGCCGTCGGCCTACGCGAGGCCGCAC
ACGCCGCCGAGCGCGGCGACACCGCCAAGATCCGCGCCAACCGCCTCCTCAACTCGTGCGGCTCCGCCGGACGCCGCGTC
GGCAACAGGCTGGGCGTCATCGGCCTCCTCTACGCCGGCAT------------GGTCACCGCCAGGGACGGCCAGGACGA
CTGGATCAACAGCCTAGTCGCCGGCCTCGGCACCGGCGCCCTCTTCAGGGCCGCCCAGGGCCCCAGGTCTGCCGCCGTCG
------------GAGGGGTCCT---------CGCCATGGCCGCCAAGCAGGCAGCCAAGAGATACGCGCCCGCCTTC---
-----------------TGATTGATTCATTGATTC---------------------------------------------
---------------------CTCTC------------------------------------------------------
--------ATC-AATCGAATCAGAATCAGA------------TAGCCTCTTCGTTTATTGCTCTCCCGGTTAATTATATT
ATAGTATTATTTAAGAAGAGGGTCATCTTCTCGACATTATTATGGTATTATTAACTACTCCCTCCGTTCCAAAATATAAG
TCTTTTAAGAGATTCCAATAAGGGCTACATACGGAGCAAAATGAGTGAATCTACATTCTAAAATATGTTTATATACATCC
GTATGTAGTTTCTTAGTGAAATCTCTAGAAAGACTTATATTTAGGAACGGAGGGAGTAAGTGTTATGC--TATATGAAAA
CAACAACGATGCCATCGGTAT-CATCGGATCAGCAAATTTTTGACATGCCTTGTTGCAATG----TAACATCATCTTCTT
----TCTTCATCACTACTACTACTTGGTTAGCGACCTAGAT----TGTCGTGGGTGTCAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTACA
TTATGCTGGAGAGTCCAGGAAATCGTGGAATGTAATGTTCATTGCATGCTACTCCCTCTGTTTCTAAA----TACAAGTC
TTTTTAGAGATT--------------------------------T--------------------------------CAT
TTTGCACCGTATGTAGCCCATATTGAAATCTCTAAAAAGACTTGTATTTAGAAATTATCGTGGTGCTTGCTATGCTTCAT
GTCTGATGAAA----TATTTTGCCGCAGAATGGCAGGTTAATTGGGTATTTCTCTTATCTTTCTGCTGATGTTATTGTTC
TTGAATGCCACACTGCTATTTC---AATTAACTAGACTTGATGAAAAAGTTGAGCTTTTTGCATTCTACTACTCACAGTG
CA-----TTCTACTTGTGT-CCTTTTCTCATCTTTCTGCACATGTTATT---GTTACGGAACGCTATACTTCTATTTTAA
GTAA-----CTAGAGTTGATGAGAAACTTGAGCCTTTTTGCATTCTGATAGTTTAACAACAATGCATTGCTA---ACTCG
CAATGGAATGCTC---------------TAACTTGAATACATTGCATCCTGCTATTGAAGAATGCATTTGGATCACCGTT
ATTTTTGCACTT--------------TATCCGTTGATGATATTCTTGCCTATTTCTATCCTGGCAGCTTGCTAGTGGTGG
CATATGCATCCTAGTGTACTACTTCTTCACATGTAGGACATTTTTGCAGATTGGTGTACATTGGCACTCTTCAGGTTTTA
TTTTAGTGTGTGTGTGTTCACTCAATTTAGGTCTGTATGCTGTCCATAATAAAATATCAAAAACATGTTATATTTATGAA
CGGAGGGAGTAGATGAATTGGGTATTTCTCTGATTTTTCTGCCAATTATATTGTTACGGAACGCTATACTGCTATTTTGA
ATAACTTCAGTTGATGAAAAAGCTGAGCTTTTTGCATGCTAGTATTGGCACTGTGCATTCTACTTGGGTGCCTTTCTGAT
CCTTCTGCATATGTTATTACTACAGAGTGCTGTACTGCTAATTCTGATGACTAGAGTTGATGAGAAACTACTTGAGCCTT
TTTGCATTCTGATAATTTAACAACAATGCATTGCTACTCACAATGGAATGCTCTAGTGTTGTTTCGAATAACTTGAATTC
ATCAGAAAGTTCAACTTATTGCATTCTGCTATTGAACCATGCATCTCATAGTTATGCTTGCACTTATCCCTATATCCTTT
ATACAGTTATGATATTCTTGCCTATTCCATTCGACCTAGCTGGTGGGTGTCAGACTCAATAATATGTTTGTGTGCGTTTA
CATTATGCT-----GGAGAGTCCAGGACATTGTGGAATGTA---ATGTTCATTGTAGAGTAATTT
>chr1B_987
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--------------CCGCCGCCGCCGCCATGGCCGACCCGCGGATGTTCCCATCGGGATCAAACGGCCCGGAAGACCACG
CCA------------------------CCGGCCGCCGGAAGTACAACCCCTACCAGGACCTCAACATGCCCTACAACTAC
AAGAACCTCTACGACCTCCCCACCTCGCCGGAGTTCCTCTTCGAGGAGGAGTCCGCGGTGCAGCGCCGATCCTGGGGCGA
GAACCTCACGTACTACACGGGCATCGGGTACCTCTCTGGCGCCGTGGGCGGCGCCGCCCTCGGCCTCCGCGACGCCGCCG
CGGGCGCGGAGCCCGGGGAGACCGCCAAGATCCGCGCCAACCGCTTGCTCAACGCCTGCGGCAGCTCCGGCCGCCGTTAC
GGCAACAGGCTCGGGGTCATCGGGCTGATGTACGCCGGGATGGAGAGCGGCATGGTCGCGGCACG---CGACCAAGACGA
CTGGATCAACAGCGTCGCCGCCGGGCTCGGCACCGGAGCGCTCTTCCGCGCCGCTAACGGGCCGCGGTCTGCCGCCGTCG
CGGGCGCCGTCGGCGGGGTCCTCGCCGCCGCTGCCTTGGCCGGGAAGCAGCTTGCGAAGCGATACG--------------
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-----------------------------------------------------------------
>chr1A_987
--------------------------------------------------------------------------------
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--------------CCGCCGCCGCCGCCATGGCCGACCCGCGGATGTTCCCATCGGGATCAAACGGCCCGGAAGACCACG
CCC------------------------CCGGCCGCCGGAAGTACAACCCCTACCAGGACCTCAACATGCCCTACAACTAC
AAGAACCTCTACGACCTCCCCACCTCGCCGGAGTTCCTCTTCGAGGAGGAGTCCGCGGTGCAGCGCCGATCCTGGGGCGA
GAACCTCACGTACTACACCGGCATCGGGTACCTCTCTGGCGCCGTGGGCGGCGCCGCCCTCGGCCTCCGCGACGCCGCCG
CGGGCGCGGAGCCCGGGGAGACCGCCAAGATCCGCGCCAACCGCTTGCTCAACGCCTGCGGCAGCTCCGGCCGCCGTTAC
GGCAACAGGCTCGGGGTCATCGGGCTGATGTACGCCGGGATGGAGAGCGGCATGGTCGCGGCGCG---CGACCAAGACGA
CTGGATCAACAGCGTCGCCGCAGGGCTCGGCACCGGCGCGCTCTTCCGCGCCGCTAACGGGCCGCGGTCTGCCGCCGTCG
CGGGCGCTGTCGGCGGGGTCCTTGCTGCCGCCGCCTTGGCCGGGAAGCAGCTTGCAAAGCGATACG--------------
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-----------------------------------------------------------------
>chr1D_987
--------------------------------------------------------------------------------
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--------------CCGCCGCCGCCGCCATGGCCGACCCGCGGATGTTCCCATCGGGATCAAACGGCCCGGAAGACCACG
CCC------------------------CCGGCCGCCGGAAGTACAACCCCTACCAGGACCTCAACATGCCCTACAACTAC
AAGAACCTCTACGACCTCCCCACCTCGCCGGAGTTCCTCTTCGAGGAGGAGTCCGCGGTGCAGCGCCGATCCTGGGGCGA
GAACCTCACTTACTACACGGGCATCGGGTACCTCTCTGGCGCCGTGGGCGGCGCCGCCCTCGGCCTCCGCGACGCCGCCG
CGGGCGCGGAGCCCGGGGAGACCGCCAAGATCCGCGCCAACCGCTTGCTCAACGCCTGCGGCAGCTCCGGCCGCCGTTAC
GGCAACAGGCTCGGGGTCATCGGGCTGATGTACGCCGGGATGGAGAGCGGCATGGTCGCGGCACG---CGACCAAGACGA
CTGGATCAACAGCGTCGCCGCAGGGCTCGGCACCGGCGCGCTCTTCCGCGCCGCTAACGGGCCGCGGTCTGCCGCCGTCG
CGGGCGCTGTCGGCGGGGTCCTTGCTGCCGCCGCCTTGGCCGGGAAGCAGCTTGCGAAGCGATACG--------------
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-----------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-------S---------------S-------------S--
---S--------------S---S---S-----------------------------------S-------S--S------
-------------S----------------------------------S--------S----------------------
-----------------------------------------------------S----------S---------------
----------------------S--SSS----------------S------------------------------S----
-------S-------------------S-----------S-S---S----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------SS------
--------SSS-------S-SSSSSS-SSSSS-S-S-S------------------------------------------
-------------S-----S-SSSSSSSSS---S-----------------SSSSSSSSSSSSSSSSSSSSSSSS-----
----S----SSSS--------------------S------------------S---------------------------
-------------------------------S--S--S-SS-----------------S-SSSSSSSSSSS-SS-SSSS-
-------------------------------------------S-S---SS-----------------------------
-SS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----------------S--------------------------------------S-------
--------------------------------------------------------------------------SS-SSS
SSSSSSSSSSSSSSSSS------------S---S----------------------------------------------
-----------------------------S----S---------S-SSS-------------------------------
----------SS------------------------S--------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SSSS----------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------SSSS--------
--------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
--------------------------------------------------------------------------------
-----------S-------------S------------------------------------------------------
-----------------------------------------------------------------------------S--
-------------------------------------------------SSS----------------------------
--------------------------------------------------S-----------------SS-SSSS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
---------S-SS----------------------------SSS---------------------
>forward_1300
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGACTTGAGGGATCGGCCTA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_4490
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GGAGTGGAGAGTCCAGGACA------------------------------------
