>input_sequence_74129
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---------ATGGAGGTAAGGCATCCCATGCCAGTGCCAAGTTCATCGAGGATCATGGGTGTGGTGTTCATCCTTGTGCT
CGGTCTGTA-TTGGTCTTGCAGAAGGCGAGGAGGCCTCAGGTGCCGGCGTTCGGGGAGTGGAACTACTACTACCACTACG
ACGAGCCGGCGGCGGCGGCGGCGTGGTACGCCATGCCGGAGCCGCAGGCCTGCAGCGACGTGTGGTTCAAGTACTCGCCG
CCCCCGCACAAGCCCG------CGCCCAAGAAGCAGCAAGCGAGGCGGCGGCGGCCGGCGGACTGCGACAGCGTGTCCCG
GGAGCGTCAGCACGCGAGGCCGTCCTTGGACGCCGCTGCAACGGCCAAGGGCGGCACCTCCAGGCGGGTGGTGCGGCCGG
TCGACGCGGACCTGTACCAGGTGCCGCCGCCGGAGTTCACCCCCAACCGGCGGCCAAGCAAGGT---------ACGTACG
GCCCCATAAAAGAATGTGTAATTACTGCTGGAGCGGGTTTCTTTAATT-TTTGTCGTAATGGTTGGAACTTATTGACTGA
TCTTTTCGTTGTTTGAATGCGGCTTGTGCAGCAGAGGAGGAGCCTGTGGATGATGGGCTGCCTGGGCTGCGTCGCCTGA-
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--------------------------------------------------------------------------
>chr5D_1_TraesCS5D01G297300
GAGCACTAAAAGGCATTTCTTCGGTCTGTCGTTGTTAAAGAAGTCCGAACTCCGAAGCAACATAGTTGCCCAAACCTTGC
AATTTTCGCTAGAGCAAAAGCCCTAGTACTACAATACCTTTT---GTACTCCATGTGCATTTTGAGAGCAAAATTTCCAT
CGTT---CAGAGTTAAGAGCATCCAACGTTTACGATAGGTGTGTTCACTCATTTGAATACTAGTACTACCTCGAGTAACA
CAATCCGAGATTCCGAGCCACACTCGTCGACACGAGAGCAGAAGCAATATTAATAC----GTAGTACAAAGCTTGCGGTA
GAAGCCATCTTGTCAAAGCGTGTTACCGCG---ACACCTCGGAGTCATCCGGGCAGCAGGGCGTGCCAGCTTCGCGACGC
TCACTCCGATTTTCTAA---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TAATCAGCC---GGCGATGATGCCGAAACACAACAGC
A-CGGG-GCGCGACAAGAGGGCCGCGGGGGTCAGCGGCGAACCCGGCGACGACATGCAGCGAG-----GCGTAGAAAAGG
AACGGCGCCCGATGCGTGCGCAGTAAAAGCCCGCCCGCCAAACGAGGGACCACGGCCGGCCCGGCCGGACAGACACCGCT
CTGCCCGTCGATGCCTA----------GCCCGCTGCAGGCTACAGTG--CTAGCAGCAGTGCTCCTACCCCGCTGAAAAG
GTCCGGCCTTCCATACTGCA-CCCCCCTCTCTCTACC----------GCTCGCTCGCCCTTTGTCAAACCTCGCCGGTCC
CGAACCCGAAGCCCCATTCCTCACTTCAACGCCGCACACCGGAGCGCGCGCCCGGCTCG---CTCTGACCGGCGTTGCTG
GCGCTCCGTTGCTCCCCCGCTTCTCGCTATAAATAACTACACGCACA---TCCAGCCAGCCTGCCAGCCAACCATTGGAG
GAGCTTCCATC-------------------------------CCCACACTGACCGGCCCACCCCAGCTTGCTTGCTGGCT
TC--------------------TCTTCTTCTTCTCTAGCTCCTTCTCTAACTCCTTCTGTCTGCCCTGCCCTGCCCCGTG
CCGAGCCAGATGGAGGTAAGGCATCCCATGCCAGTGCCAAGTTCATCGAGGATCATGGGTGTGGTGTTCATCCTTGTGCT
CGGTCTGTA-TTGGTCTTGCAGAAGGCGAGGAGGCCTCAGGTGCCGGCGTTCGGGGAGTGGAACTACTACTACCACTACG
ACGAGCCGGCGGCGGCGGCGGCGTGGTACGCCATGCCGGAGCCGCAGGCCTGCAGCGACGTGTGGTTCAAGTACTCGCCG
CCCCCGCACAAGCCCG------CGCCCAAGAAGCAGCAAGCGAGGCGGCGGCGGCCGGCGGACTGCGACAGCGTGTCCCG
GGAGCGTCAGCACGCGAGGCCGTCCTTGGACGCCGCTGCAACGGCCAAGGGCGGCACCTCCAGGCGGGTGGTGCGGCCGG
TCGACGCGGACCTGTACCAGGTGCCGCCGCCGGAGTTCACCCCCAACCGGCGGCCAAGCAAGGT---------ACGTACG
GCCCCATAAAAGAATGTGTAATTACTGCTGGAGCGGGTTTCTTTAATT-TTTGTCGTAATGGTTGGAACTTATTGACTGA
TCTTTTCGTTGTTTGAATGCGGCTTGTGCAGCAGAGGAGGAGCCTGTGGATGATGGGCTGCCTGGGCTGCGTCGCCTGAG
CCG---AACCCCTCCCATGCCTGCCAACGGGAAG--------------------------------CGGGAAGCTGCGTG
TTTATACCGGAGTAGTATTTAC---------ATTTTCACTTTCTCTTGTTGTTGGGTAGTTCTCTCTCTCTGCGACGTTC
GTGGTGATCTCTTGGCTTGTGGCAAGATAGTTATTACTGCTACTCTTTTAGAGTTGGACTTTCTACTCTCTTTTTTGTAT
GATGTGGCGTGGGTAACACTGGCTATGACCATTTCGAGCTTCTACTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAACGTG
GGTGAGGTTTCCTTCTGTGTGCAACATCTCTGTG--------------------------TTCATCAGCCCGAGAAGCAC
AATGTTTACAAATTCTGATCAAGTTTAAGTTGCAAACAAACGAGCTCTCAC-------ATCACACTGCATTGCAC-----
---GAGAGGACACGGCGACATTGGGTCCGGGCTTGGCCGTATGCATCCCGGGGTCGTGTGCC------AGTCCACTGTAT
CAGTGACCGCAATAGGCAATGGGGGCTCCTGAGGCAAATTTGACAAATTTAACCTATGGACGAAATCAAATCCCGGAATG
AACTGTCCATGAAACTATTTCACGCGGCTGACCTTTTTATGTGACGTCCGACACGAAGGCGTCACACTATACTGTGCAAC
GCCTCATAGATAGGCGCTACACGCCTGGCCAGCGTTGCACCCGTGTGATCCGAAAATTACTAAGTCAGTGTGCAGCGCCT
GAGAGCTAGG------------C------------AGTGTGGCGCCTAGCTTTTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAACGCCTGAGAGTTAGGCGCCACACTATACAGTGCAGTGCCTAGCTCTTAGGCTCTGC
ACAATGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGGCCAGGCGTGTAACGCCTATCTGTGAGGTGTTGCACA
GTGTAGTGTGACGCCTTCGTGTCGGGCGTCACACAAAAAAGTCAGCCGCGTGAAATAGTTTCACGGACAGTTCA
>chr5A_1
GAGGACTAAAAGGCATTTCTTCGGTCTGTCCTTGCTAAACAAGTCTGAAACAATG-------TAGCTGCCCAAACCGTGC
AATTTTCGCTAGAGCAAAGCC-------CTACAATACTTTTTGGAGTATTCCATCTCCATTTTGAGAGTAAAATTTTCCA
TCGTTTATAGAGTTAAGAGCATCCAACGTTTACGATAGGTGTACTCACTCATTTGAATG------CTACCTCGAGTGACA
CAATCCGAGATTCCGAGCCACACTTGTCGACACCGGAGCAGAAGCAATAATAATACAGTAGTAGTACAAAGCTTGCGGTA
GAAGCCATCTTGTCAAAGCGTGTTACCGCC---ACACCTCGGAGTCATTCGGCCAGCAGGGCGTGCCAGCTTCGCGACGC
TCACTCCGATTTTCTAA---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TAATCGGCC---GGCGATGATGCCGAAACACCACAGC
A-CGGGCGCGCGACAAGAGGGCCGCGGGGGTCAGCGGCGAACCCGGCGACGACATGCAGATGCAGCGAGCGTCGAAAAGG
AACGGCGCCCGATGCGCGCGCAGTAAAAGCCCGCGCGCCAAACGAGGGACCACGGCCGGCCGGACA-GACAGGCACTGCT
CTGCCCGTCGATGCCTACTACTAGCTCGCCTGCCGCAGGCTACAGTGGGCTAGCTGCAGTGCTCCTACCCCGCTGAAAAG
GTCCGGCCTTCCATACTGCCCCCTCTCTCCCTCTCTCTCCCTTGCTCGCTCGCTCGCTCTTTCTCAAACCTCGCCGGTCC
CGAACCCGAAGCCCCATTCCTCACTTCAACGCCGCGCACCGGAGCGCGCGCCCGGCTTGCCACTCTGACCGGCGTGGCTG
GCGCTCCGTTGCTCCCCCGGCTCTCGCTATAAATATAGTG--CACGCGTGTCCAGCTAACCAGCCAGCCAGCCATTGGAG
GAGGTTCCATTTCCTCTCTGTTTTGCTCTAAACTTCGATCCACCCCGACCGACCGACCGACCCCAGCGTCGTTGCCTCTC
TTCCTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTAGCTCGTTCTGTCTC-----CCCTGCCCCGTG
CTGAGCCAGATGGAGGTAAGGCATCCCATACCAGTGCCAAGCTCGTCGAGGATCATGGGTGTGGTGTTCATCCTTGTGGT
CGGTCTGTTTCTGGTGTTGCAGAAGGCGAGGAGGCCTCAGGTGCCGGCGTTCGGGGAGTGGAACTACTACTACCACTACG
ACGAGCCGGA------GGCGGCGTGGTACGCCATGCCGGAGCCGCAGGCCTGCAGCGACGTGTGGTTCAAGTACTCGCCG
CCCCCGCGCAAGCCCGCGCCCACGCCCAAGAAGCAGCAGGCGAGGAGGAGGCGGCCGGCGGGCTGCGACGGCGTGTCCGG
GGCGCGTCAGAGCGCGAGGCCGTCCTTGGACGCTGCTGCAACGGCCAAGGGCGGCGCCTCCAGGCGGGTGGTGCGGCCGG
TCGACGCGGACCTGTACCAGGTGCCGCCGCCGGAGTTCACCCCCAACCGGCGGCCAGTTAAGGTAGAGCACGCACGTACG
GCCTCAGAAAAGAACGTGTAATTACTGCTGGAACGGGTTTCTTTAATTGTTTGTCGTAATGGTTGGAACTTACTGACTGA
TCT-----CTGTTTGAATGCAGGTTGCGCAGCAGAGGAGGAGCCTGTGGATGATGGGCTGCCTGGGCTGCGTCGCCTGAA
GCCCTCAACCTATCCCGTGCTGACCAGACACGGTCACT------------------------------GGATGCTGCGTG
TTCATACCGTAGCAGTAGTATTTACAT-----TTTTCACTTTCACTT---------------------------------
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>chr5B_148
--------------------------------------------------------------------------------
----------------------------------------------------------------------AAATTTCCAT
CGTT---TAGAGTTAAGAGCATCCAACGTTTACGATAGGTGTACACACTCATTTGAATG------CTACCTCGAGTAACA
CAATCCGAGATTCCGAGCCACAACTGTCGACACCAGAGCAGA-GCAATAATAATATACT----GTACAAAGCTTGTGGTA
GAAGCCATCTTGTCAAAGCGTGTTACCACTACTACACCTCGGAGTCATTCGGGTAGCA-GGCGTGCCAGCTTCGCGACGC
TCACTCCGATTTTCTAAGACTAGCCACAATGATAACATGCAATACTTCATTTGTTATGCTATAGACTCATTTTACTTTGA
TATGTGTGATGTTACAGTAACTAGTTAAGTTACTAGAACTATCTCTCTTTTCATCAACTCATTGTCACATAGACAAATTT
GCTGAGTTGGACTTGAATTTACTGCTGACCATTGTGGCTAGTCTAATCAGCCGGTGGCGATGATGCCGAAACACAACACG
GCCGGGCGCGCGACAAGAGGGCCGCGGTGGTTAGCGGCGAACCCGGCGACGACATCCAGATGCAGCGAGCGTCGAAAAGG
AACGGCCCCCGATGCGTGCGCAGTAAAAGCCCGCGCGCCAAACGAGGGACCACGGCCGGCCGGACA-GACA----CCGCT
CTGCCCGTCGATGCCTA----------GCCCGCTGCAGGCTACAGTT--CTAGCAGCAGTGCTCCTACCCCGCTGAAAAG
GTCCGGCCTTCCATACTGCCTCCTCTCTCTCTCTCTC----------GCTCGCTCGCTCTTTGTCAAACTTCGCCGGTCC
CGAACCCGAAGCCCCGTTCCTCACTTCAACGCCGCACACCGGAGCGCGCGCCCGGC-----------------GTGGCTG
GCGCTGCGTTGCTCCCCCGGTTCTCGCTATAAATATAGTTTACACGCGTGT----CTAGCCAGCCAGCCAGCCATTGGAG
GAGGCTCCG-TTCCGCTCTGTTTAGCTCTAAACTTCGCCCCACACTGACCGACCGGCCGACCCCAGCTTGCTCGCCTC--
-------------------------------TCTTCTTCTTCTCTACTAGCTCGTTCTGTCTG-----CCCTG-CCCGTG
CTGACCCAGATGGAGGTAAGGCATCCCATGCTAGTGCCAAGTTCATGGAGGATCATGGGTGTGGTGTTCATCCTTGTGGT
CGATCTGTTTTTGGTCTTGCAGAAGGCGAGGAGGCCTCAGGTGCCGGCGTTCGGGGAGTGGAACTACTACTACCACTACG
ACGAGCCGGA------GGCGGCGTGGTACGCCACGCCGGAGCCGCAGGCCTGCAGCGACGTGTGGTTCAAGTACTCGCCG
CCCCCGCGCAAGCCCACGCCCACGCCCAAGAAGCAGCAGGCGAGGAGGAGGCGGCCGGCGGGCTGCGACAACGTGTCCGG
GGAGCGTCAGCACGCGAGGCCGTCCTTGGACGCTGCTGCCGCGGCCAAAGGCGGCGCCTCCAGGCGGGTGGTGCGGCCGG
TCGACGCGGACCTGTACCAGGTGCCACCGCCGGAGTTCACCCCCAACCGGCGGCCAACAAAGGT---------ACGTACT
GCCCCAGAAAAGAATGTATAATTACTGGTGGAAT-GGGTTCTTTAATT-TTTGTCGTAATTATTGGA----ACTGACTGC
TGT-----TTGTTTGAATGCGGCTTCTGCAGCAGAGCAGGAGCCTGTGGATGATGGGCTGCCTGGGCTGCGTCGCCTGAA
GCCCTCAACCTCTCCCGTGCTGACCAGACGGGATGCTGCGTTAGCCCGGTTCAAAAAAAAAAAAGTCGGGATGCTGCGTG
TTTATACCGGAGTAGTAATATTTATATCGGAATTTTCACTCTCTCTTGTTGGGTTAGT----TCTGTCTCTGCGATGTTC
GTGCTGCCCTCTTGGCTTGTGGCAAGATAGTTATTACTGCTACTCTTTTCGAGCTGGAGTATCTACTCTCTTTTTTGTGT
AATGTAATGTGGGTGCGGT-------------------------------------------------------------
------------TTCTGAATGCAACATCTCTTCGTTAGCACGTTGGTGCCACTATTTCCATTCATCAGCCCGTGAAGTAC
AATGCCTACAG-TTCTGATCAAGTTTAAGTTGCAAACAAACGAGCTCTCACATGTCACATCACATTGCATTGCACTTGCA
CAAGAGAGGAGACGGCGACTTTGGGTCTGGTCTTGGCCCTATGCATCCCGGGGTCGTGTGCCCACGCCAGTCCACTGTAT
CAGTGACCGCAATAGGCAATGGGGGCTCATGAG-----------------------------------------------
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>chr4D_2113
TGC-----------------------------------------------------------------------------
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--------------------------------GGCAAAATTGACAAATTTGACCTATGGACGAAATCAAATCACAGAATG
AACTGCTCGTGAAACTATTTCACGCGGCTGACCTTTTTGTGTGACGCCCGACACGAAGGCGCCACACTACACTGTGCAAC
GCCTCATAGATAGGCGCTACACGCCTGGCCAGCGTCGCACCCGTATGATCCGAAAATTACTAAGTCAGTGTGCAGCGCCT
GAGAGCTAGGCGCCACACTATAC------------AGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAGCGCCTGAGAGCTAGGCACCACACTATACAGTGCAGCGCCTAACTCTTAGGCTCTGC
ACAATGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGGCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACA
ATGTAGTGGGGCGTCTTTGTGTCGGGTGTCACACAAAAAGGTCAGCCATGTGAAATAGTTTCACGGACAGTTCA
>chr1D_2115
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-------------------------------AGGCAAAATTGACAAATTTGACCTATGGACGAAATCAAATCACAGAATG
AACTGTCCGTGAAACTATTTCACGCGGCTGACCTTTTTGTGTAACGCCCGACACGAAGGCGCCACACTACACTGTGCAAC
GCCTCACAGATAGGCGCTACACGTCTGGCCAGCGTCGCACCCGTGTGATCCGAAAATTACTAAGTCAGTGTGCAGCGCCT
GAGAGCTAGGCGCCACACTATAC------------AGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAGCGCCTGAGAGCTGGGCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGC
ACAATGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGGTGGCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACA
GTGTAGTGTGACGCCTTCGTGTCGGGCGTCACACAAAAAGGTCAGCCGCGTGAAATAGTTTCACGGACAGTTCA
>chr5D_2116
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--------------------------------GGCAAAATTAACAAATTTGACCTATGGACCAAATAAAATCATAGAATG
AACTATCCGTCAAACTATTTCACGCGGCTGACCTTTTTGTGTGACGCCTGACACGAAGGCGCCACACTACACTGTGCAAC
GCCTCACAAATAGGCACTACAT-CCTGGCCAGTGTCGCATCCGTGTGATCCGAAAATTACTAAATCAGTGTGCAGCGCCT
GAGAGCTAGGCGCCACACTATACG------------GTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGC
ACAATGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGGCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACA
ATGTAGTGTGGCGCCTTCGTGTCGGGCGTCACACAAAAAGGTCAGCCGCGTGAAATAGTTTCACGGACAGTTCA
>chr7D_2116
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--------------------------------GGCAAAATTGACACATTTGACCTATGGATCAAATCAAATCACAGAATG
AACTGTCTGTGGAACTATTTCATGCGGCTGACCTTTTTGTGTGACGCCCGACACGAAGGCGCCACATTACACTGTGCAAC
GCCTCACAGATAGGCACTACATGCCTGGCCAGCGTCGCACCCGTGTGATCCGAAAATTATTAAGTCAGTGTGCAGCGCCT
GAGAGCTAGGCGCCATAC-------------------TGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGC
ACAATGACTTCGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGGCCAGGCGTGTAGCGCCGATCTGTGAGGCGTTGCACA
ATGTAGTGTGACGCTTTCGTGTCGGGCGTCACATAAAAAGGTCAGCCGCGTGAAATAGTTTCAGGGACGGTTCA
>chr6D_2116
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--------------------------------GGCAAAATTGACAAATTTGACCTATGGACGAAATCAAATCACAGAATG
AACTGTCTGTGAAACTATTTCACGCGGCTGACCTTTTTGTGTGACGCCCGACACGAAGGCGCCACACTATACTGTGCAAC
GCCTCACAGATAGGCGCTACACGCCTGGCCAGCGTCGCACCCGTGTGATCCAAAAATTACTAAGTCAGTGTGCAGCGCCT
GAGAGCTAGGCGCCACACTGTAC------------AGTGTAGCGCCTAACTTCTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAGCGTCTGAGAGTTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGC
ACAATGACTTAGCAATTTTTAGGCAGTCTGAGGTGCAACGCTGGCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACA
ATGTAGTGTGGCGCCTTCGTGTCGGGCGTCACACAAAAAAGTCAGCCGCGTGAAATAGTTTCACGGGCAGTTCA
>chrUn_2116
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--------------------------------GGCAAAATCGACAAATTTGACCTATGGATGAAATCAAATCACAGAATG
AACTGTCCGTGAAACTATTTCACGCGGCTGACCTTTTTGTGTGACGCCCGACACGAAGGCGTCACACTACACTGTGCAAC
GCCTCACAGATAGGCGCTACACGCCTGGCTAGCG-CGCACCCGTGTGATCCGAAAATTACTAAGTTAGTGTGCAGCGCCT
GAGAGCTAGGCGCCACACTATAC------------AGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCATAGCTCTTAGGCTCTGC
ACAATGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGTCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACA
GTGTAGTGTGGCGCCTTCGTGTCGGGCGTCACACAAAAAGGTCAGCCGCGTGAAATAGTTTCACGGACAGTTCA
>chr3D_2116
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--------------------------------GGCAAAATCGACAAATTTGACCTATGGATGAAATCAAATCACATAATG
AACTGTCCGTGAAACTATTTCACGCGGCTGACCTTTTTGTGTGACGCCCGACACGAAGGCGTCACACTACACTGTGCAAC
GCCTCACAGATAGGCGCTACACGTCTGGCTAGCGTCGCACCCGTGTGATCCGAAAATTACTAAGTTAGTGTGCAGCGCCT
GAGAGCTAGGCGCCACACTATAC------------AGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGC
ACAGTGACTTAACAATTTTTAGGCAGTCTGGGGTGCAACGCTGTCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACA
GTGTAGTGTGACGCCTTCGTGTCGGGCGTCACACAAAAAGGTCAGCCGCGTGAAATAGTTTCACGGACAGTTCA
>chr3D_2116
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--------------------------------GGCAAATTTGACAAATTTGACCTATGGACGAAATCAAATCACAGAATG
AACTGTCCGTGAAACTATTTCACGCGGCCGACCTTTTTGTGTGACGCCCGACACGAAGGCGCCACAATAGACTGTGCAAC
GCCTCACAGATAGGCGCTACACGCCTGGCCAGCGTCGCACCCGTGTGATCCGAAAATTACTAAGTCAGTGTGCAGCGCCT
GAGAGCTAGGCGCCACACTATAC------------AGTGTAGCGCCTAGCTTCTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCACTAGTGCAGCGCCTGAGAGCTAGGCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGC
ACAATGACTTATCAATTTTTAGGCAGACTGGGGTGCAACGCTGGCCAGGCGTGTAGCACCTATTTGTGAGGCGTTGCACA
ATGTAGTGTGGCGCCTTCGTGTCGGGCGTCACACAAAAAGGTTAGCCGCGTGAAATAGTTTCACGGGCAGTTCA
>chr3D_2116
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--------------------------------GGCAAAATTGACAAATTTAACCTATGGACGAAATCAAATCACAGAATG
AACTGCCCGTGAAACTATTTCACGCGGTTGACCTTTTTGTGTGACGCCCGACATGAAGGCGCCACACTATACTGTGCAAC
GCCTCACAGATAGGCACTACACGTCTGGCCAGCGTCGCACCCGTGTGATCCGAAAATTACTAAGTCAGTGTGCAGCGCCT
GAGAGCTAGGCGCCACACTATACGCCACACTATACAGTGTAGCGCCTAGCTTGTAGGCGTTGCACTAGTGGTTGCTTCAT
TTTGTAGTGCAACCATTAGTGCAGCGCCTGAGAGCTAGCCGCCACACTATACAGTGCAGCGCCTAGCTCTTAGGCTCTGC
ACAATGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGGCCAGGCGTGTAGCGCCTATCTGTGAGGCGTTGCACA
GTGTAGTGTGACGCCTTCGTGTCGGGCGTCACACAAAAAAGTCAACCGCATGAAATAGTTTCACGGACAGTTCA
>SNPs
---S--------------------------S---S----S-----S---SSSSSSSSSSSSS---S----------S---
------------------SS-SSSSSSS---------S----------S-----S-S-----------S-----------
-------S----------------------------------SS--------------SSSSSSS---------------
------------------------S--------S---------------S------------------------------
-----------------------------S------------------S-------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------SSSS---------S-------
----------------------------------S--------------------------S-S-SS-----S-------
--------------------------------------------------------------------------------
-------------------S---S-S--------SS---------------------S----------------------
---------------------------------------------------------S-----------------S----
-------------------S---------------SSSSSSSSSSSS---------S----S--------S---------
---S------S----------------------------------SS--S--------S----------------SSSSS
-S--------------------------------SSSS--S--------S---S---------SSSSS------------
-S----------------------------------------------------------------------------S-
--------S-----------------------------------------------------------------------
---------SSSSSSS----------------------------------------------------------------
-------S------------------------------S------S--S------------S----------------S-
---------------------------------S---------------------S------------------------
---------------------------------------------------------SS---------------------
------S-------------------------S---------------------------------------S-------
---SSSSS-----------------------------------------------------------------------S
S-S-------S-----S---SSS---SSS--S-S-------------------------------------S--------
-----------------S-SSS-----------------------------SSSSSSSSSSS---S---------S----
---S--SS-----------------------------------------S---S----S-S-----------------S-
S----SSS------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-----SS------------SS---------------------------------------S----S--
----SS----SS----------------------------------------------------S---------------
----------S--------S-------S--S-------S-----------------------------------------
----------------------------S-------------------------------------------S-S-----
--------S-----------------------------S-------S---------------------------------
-----------------------------------S--------------------------------------------
----------------------------------------S-----------S---------------------------
-----------------------S-----------------------------------S--------------------
-------------------------------------------------------S---------------S--------
--------------------------------------------------------------------------
>forward_59
---------------------------------------GAAGTCCGAACTCCGAAGCA---------------------
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>reverse_2236
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---------------------------------------------------------------------------ACGTG
GGTGAGGTTTCCTTC-----------------------------------------------------------------
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