>input_sequence_74113
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-----------------------------------------ATGGCCTGGCCGACCCTCGCCGCGCCCCTTGTGTTTGCG
TCGATCTTCATCCTAGCCATGGCCGACCCTTCATTTGTGTGCCCCATTCTTCCTTGTGAGCGT-GAGATAAGCCTGCGTT
TGTACTTGCACCAAGTTATTGATGGGCCAGACCACAACCAGGTAGTAACCGTAAGTTCTGGCCACCCGGCTTGGTTCGGC
ACGACCGCCGTCATCGATTGGACGGTCACCGACGCGCCTCAACGCGGTGCGACTATTGTCGCCCGCGCGAAAGGCATGCA
ATTGCAGGCGGACATAGAGGGTCCTGGCTGGTTCAATTATTTCACCATGGTGTTCGAAGATCCAAGGTACGATCATAATC
ATACTACTAGTGATTCAGCACTTGAGGACTGTAAATTTTACAGAACTACTGTCCACATGATAAAGATAGTCTATGTTTAG
GGCAAGGTGATACATAACATTTCTCGTTACTCCTAA-AATGTATATACAGGTTCAGTGGGTCGACGCTTGCAGTGATGGG
TCAGTATCTATCAGAATTCAGAAGGCGAGATGGCTATTATGGGCGGGACAGGAGAGTTCGCCATGGGGCGTGGCGTCATC
AAGTTCAGAACAGTTAG---------------------------------------------------------------
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>chr6A_1_TraesCS6A01G304400
GTGGCATACCAGCGTGGCGGTGACCCACAGTGTTTGAGAGCGGGGAAAGTGCTGGGTGCTCCGCTCGTGAGGATTTTTTT
TACAAAAACCCCTTATATTTTATTTAATCACATAGAAAAGACCTCAAATACGTTGGCGGTGACCCACCTGTAAGTGTTTC
AGAGCCGGGAAAGTGCTGGGTACTCCACGTGTGATGATTTTTTTT-ATCATGAAGGGTTCCGAACCTGGCACCTCCTGGT
CAACTACAGCTCGATCTGTCCACTCGGCCAAAATATGCCACGCGTTCACCTCTTAGATAGAAAAGCTATGTAGACGCAGG
CCCGACCCTGAGCGGGGTGGAAGGGGCGGCCACCCCGGGCTCTAGGCTCTGTATTGGGATTTGGGAAGGCCCAAAATAGC
AGTAGCAAACGGCACACAACGCAGGCCCTATCCACACGACCTCAGAATACTTGAACTACGGTTTGTTTCGTTATCGCTAA
TGATAGTGCAATCCGGCTAGGCTTTCTGAATGAATAATCTAGTACTAATTTATTTTGCTCACATTTGTAGTATGTGTAAA
TTGTACCACTTGGAAAGATTGATAATATCCAACCTCAAAAGGCCATTCATGCAAAACAAAAGGGAAATTACGGCGAACTT
CCATAATGGTTTGCAAGGGTATTAGGAAATGCTGTAAAAGAGGGCACCAACGAACCAAGGGAAAGAAAGGGACATGTCCT
ATGCATTGTGGAAATCGCCACATGCATAAAAATGATTGATGTGGGGCCAATCATTCTCTCTCCGTCGCTCTCCCTAGTCT
CACCAAGCTCTAGAGAAAGCACCTAGATCAGGTAGAGAGCTTGATTCCCACATCGGTCCTATACTTGTGCCCTAAGGATC
TGGGATGCATATGCCATGCCAGCCCTTGAGCACTATAAATACAGTACATCATCTCCACATATCTCTCACACGGCACGCAA
AGAAAGAGTAGGTCAGCCTTTTGAGAGCCTGAACCCCAGGCATGGCCTGGCCGACCCTCGCCGCGCCCCTTGTGTTTGCG
TCGATCTTCATCCTAGCCATGGCCGACCCTTCATTTGTGTGCCCCATTCTTCCTTGTGAGCGT-GAGATAAGCCTGCGTT
TGTACTTGCACCAAGTTATTGATGGGCCAGACCACAACCAGGTAGTAACCGTAAGTTCTGGCCACCCGGCTTGGTTCGGC
ACGACCGCCGTCATCGATTGGACGGTCACCGACGCGCCTCAACGCGGTGCGACTATTGTCGCCCGCGCGAAAGGCATGCA
ATTGCAGGCGGACATAGAGGGTCCTGGCTGGTTCAATTATTTCACCATGGTGTTCGAAGATCCAAGGTACGATCATAATC
ATACTACTAGTGATTCAGCACTTGAGGACTGTAAATTTTACAGAACTACTGTCCACATGATAAAGATAGTCTATGTTTAG
GGCAAGGTGATACATAACATTTCTCGTTACTCCTAA-AATGTATATACAGGTTCAGTGGGTCGACGCTTGCAGTGATGGG
TCAGTATCTATCAGAATTCAGAAGGCGAGATGGCTATTATGGGCGGGACAGGAGAGTTCGCCATGGGGCGTGGCGTCATC
AAGTTCAGAACAGTTAGGAACACTGCCCATGAGAGCTACAAACAACTTGGTATCCACACATTCTATGTCCCAACTCGTGT
AAGTGAAAATTTTCTAATGCTTAATCCATACTCCCTCCCTTTCAGAATGTGGTGCATTCTT---CTTTGAGAATTGCCAT
AATGTATTAGTGCATATCTCAAGTTCAGAAGATATTCTTAGATAGTACTCCCTCTGTTTCTAAATATTTGTCTTTCTAAA
GATTTCAACAAGTGACTACATATGGAGCAAAGTGAGTGAATTTACACTCTAAAATATGTCTATATACATCCGTATGTGGT
AGTCTATTTGAAATATCTAGAAAGACAAATATTTAGTAACTGAGGGAGTAGTAGGGTGAGAAAATTTATCTGAATGATGA
TGATGGCAATTTTACA----------------------------------------------------------------
------------------------------------------TACAAATTTACAAGCATAATTCAGCACATATTATTTCT
GTGGCAGATGTGCAACACGTTAACATTTGATGCGTACC------------------------------------------
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--------------------------------------------------------TCTGATCTTCCGTTAAAATGGATA
GCTTATGTTTAAGTATTAGTACCTTAATTAGTGCATGGTTTATCGATGCGCATGAAGCTAATATTTCATGA-TTTTCCCT
TATTTTGCATGCAGGGCAATACACCCATTACACCCATTACCGTCATCTAGTAAAGCAGCCTAAATTTGTCCGGACTACAG
GAAACACATATGGCGTGACGTGAAATTGTGGAGCTTGTCGTTGTTTTACTTTCAGATAATACCTGGATTTTGAGTGTTGG
ATAGTCAATTAGTTAATCCCAAATATGTGTGCCACTGCTTGTTATTGTTTGTATA-------------------------
-----------------------ACATGTTTTGTTATATATTTTACTTTTATGATATATGATAAGTATGAATCAGTCAAA
CATATATAAATCCAGTTTCTCTTTGAATAACTTGGTTGCTTGATTGAAATGCTTTGTTCAAAGGCGTC-----------C
TGTATTTCTCGAAGTTTTGGTTCAATTTACGGAACAGATAACAACATACACAGAGATGAAAGATGTTTAATTTACTCCTT
GGAG
>chr6D_1
GTGGCATGCCAGCGTGGCGGTGACCCACAGTGTTTGAAAGCGGGAAAAGTGATGGGTACTCAGCATGTGAGGATTTTTTT
ACAG-AAACCCCTCATATTTTATTTAATCACATAGAAAAGACCTCAAATACGTTGGTGGTGATCCACCTGTAAGTGTTTG
AGAGCGGGGAAAGTGCTGGGTACTCCGCGTGTGAAGATTTTTTTTTATCATGGAGGGTTCCGAACCTGGCACCTCCTGGT
CAACTACGGCTCGATCTGTCCACTCGGCCGAAATATGCCACGCGTTCACCTCTTAGATAGAAAAGCTATGTAGACACAGG
CCCTACCCTGAGGGGGGTGGAAGGGGCGGCCACCCCGGGCTCTAGGCTCTGTAC-------TGGGAAGGCCCAAAATAGC
AGTAGCAAACAGCGCACAACGCAGGCCCTATCCGCACGACCTCAGAACGCTTGAACTACGGTTTGTTTCGTTATCGCTAA
TGATAATGCAATCCGGCTAGGCTTTCTGAATGAATAATCTAGTACTAATTTATTTTGCTCACATTTGTAGTGTGTGTAAA
TTGTACCACTTGGAAAGATTGATAATATCCAACCTCAAAAGGCCATTCAT----------------------GCGAACTT
CCATAATGGTTTGTAACGGCATTAGGAAATGCTGTAAAAAATGGCACCAACGAACCAAGGGAAAGAAAGGGACATGTCCT
ATGCATTGTGGAAATCGCCACATGCATAAAAATGATTGATGT--GGCCAATCATTCTCTCTCTGTCGCTCTCCCTCGTCT
CGCCAAGCTCTAGAGAA-GCACCTAGATCAGCTACAGAGCTTGATTCCCACATCGGTCCTATACTTGTGCCCTAAGGATC
TGGGATGCATATGCCATGCCAGCCCTTGAGCACTATAAATACAGCACATCATCTCCACATATCTCTCACACGGCACGCAA
GGAAAGAGTAGATCAGCCTC-TGAGAGCCTAAACCCCAGCCATGGCCTGGCCTAGCCTGGCCGTGCCCCTTGTGTTTGGG
TCGTTCTTCATCCTAGCCATGGCTGACCCTTCATTTGTGTGCCCCATTCTTCCTTGTGAGCGT-GAGATAAGCCTGCGCT
TGTACTTGCACCAAGTTATTGATGGGCCAGACCACAACCAGGTAGTAACCGTTAGTTCTCGCCACCCGGCTTGGTTCGGC
ACGACCGCCGTCATCGATTGGACAGTCACCGACGCGCCTCAACGCGGTGCGACTATTGTCGCTCGCGCGAAAGGCATGCA
AGTGCAGGCGGACGTAGAGGGTCCTGGCTGGTTCCACTATTTCACCATGGTGTTCGAAGATCCAAGGTACGG------TC
ATACTACTAGTGATTCAGCACTTGAGGACTGTAAATTTTACAGAACTACTGTCCACATGATAAAGATAGTCTATGTTTAC
-----GGTGATACTTAACATTTCTCGTTGCTCCTAA-ATGTAT-----AGGTTCGGTGGATCGACGCTTGCAGTGATGGG
TCAGTATCTA-------TCAGAAGGCGAGATGGCTATTATGGGCGGGACAGGAGAGTTCGCCATGGCGCGTGGCGTCATC
AAGTTCAGAACAGTCAAGAACACTGCCCATGAGAGCTACAAACAACTTGATATCCACACATTCTATGTCCCAACTCGTGT
AAGTGAAATG-TTCTTATGCTTAATCCATACTCCCTTCTTTTCAGAATGTAGTGCATTCTACACCTTTCAGAATTGCCAT
AATCTGTTCGTGCGTATGTCAAATCCAGAAGATATTCTTAGATAGC---AT-----------------------------
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------------------------------------------------------GGTGAGAAAATTTATCCGAATGATGA
TGATGGCAATTTTACA----------------------------------------------------------------
------------------------------------------TACAATTTTACCAGCATAATTCAGCACATATTATTTAT
GTGGCAGATGTGCAACACGTTAACATTTGATGCGTACAGGCCTTACATTGCA----------------------------
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-----------------------------------------------------ACTGCTGATCTTCCGTTAAAATGGACA
ACTAATGTTTAAATCAA--------------TGAATGGTTTATTGATGTGCATGAAGCTAATATTTCATGA-TTT-CCCT
TATTTTGCATGCAGGGCAATACAACCATTACACCCATTACCGTCATCTAGAAAAGCGGTCTAAATTTGTCTGGACTACAG
GAAACACATATGGCGTGACCTAAAATTGTTGAGCTTGTTGTTGTTTTATTTTCAAATAATACCTGGATTTTGAGTGTTCC
ATAGTCAATTAGTTAATCCCAAATCTGTGTGCTACTGCTTG---TTGTTTGTATA-------------------------
-----------------------ACGTGTGTTGTTATATATTTTACTTTTACGATATATGATGAGTATGAATCAAACATG
T--------ATAAAGTTTCTCTTTGAATAACTTGGTTGCTTGATTGAAATGCTTTGTTCAAAGGCACATGACAAGATAAC
TGTATTTCTCGAAGTTTTGGTTCAATTTACGGAACAGATAACAAGATACACAGAGATGAAAGATGTTTAATTTACTCCTA
GGAG
>chr6B_525
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---------------------------------------------TAGTTTATTTTGCTCACATTTGTAGTATGTGTAAA
ATGTACCACTTGGAAAGACTGATACTATCCAACCTC-------------------------GGGAAATGACGACGAACTT
CCATATTGCTTTGTAAGGGCATTAGGAAATGCTGTAAAAAATGGCACCAACGAACCAAGGGAAAGAAAGGGACATGTCCT
ACGCATTGTGGAAATCGCCACATGCATAAAAATGATTGATGT--GGCCAATCATTCTCTCTCTGTCGCTCTCCCTCGTCT
CACCAAGCTCTAGAGAA-GCAGCTAGATCAGGTAGAGAGCTTGAT-----------TCCTATACTTGCGCCCTAAGGATC
TGGGATGCATATGCCA-----GCCCTTGAGCACTATAAATACACTACATCATCTCCACATATCTCTCACACCGCACGCAA
GGAAAGAGTAGATCAGCCTT-TGAGAGCCTAAACCCCAGCCATGGCCTGGCCTAGCCTCGCCGTGCCGCTCTTGTTTGCG
TCGTTTTTCATCCTAGCCATGGCCGACCCTTCATTTGTGTGCCCCATTCTTCCTTGTGAGCGTTGAGATAAGCCTGCGTT
TGTACTTGCACCAAGTTATTGATGGGCCAGACCACAACCAGGTAGTGACCGTTAGTTCTCGCCAACCGGCTTGGTTTGGC
ACGACCGCTGTCATTGATTGGACGGTCACCGACGCGCCTCAACGCAGTGCGACTATTGTCGCTCGCGCGAAAGGCATGCA
AGTGCAGGCGGACGTAGAGGGTCCTGGCTGGTTCCATTATTTCACCATGGTGTTCGAAGATCCAAGGTAC------AATC
ATACTACTAGTGATTCAGCACTTGAGGACTGTAAATTTTACAGAACTACTATCCACATGATAAAGATAGTCTATGTTTAC
-----GGTGATTCATAACATTTCTCATCACTCCTAAAATGTAT-----AGGTTCGGTGGGTCGACACTTGCAGTGATGGG
TCAGTATCTA-------TCAGAAGGCGAGATGGCTATTATGGGCGGGACGGGAGAGTTCGCCATGGCGCGTGGCGTCATC
AAGTTCAGAACAGTCAAGAACACTGCCCATGAAAGCTACAAGCAACTTGATATCCACACATTCTATGTCCCAACTCGTGT
AAGTGAAATG-TTCTAATGCTTAATCCATACTCCCTCCCTTT-AGAATGTAGTGCATTCTT---CTTTGAGAATTGCCAT
AATGTATTAGTGCGTATCTCAAGTTCAGAAGATATTCTTAGATAGTAGTAT-----------------------------
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------------------------------------------------------GGTGAGAAAATTTATCTGAATGATGA
TGGTGGCAATTTTACATACTCCCTCCGTTCACTTTTATAAGTCATTTCAGACAAGTAAAATTGAGTTGTATTGCACAATG
TCTGAAACATCTACAAAGCCTTATAAAAGTGAACAGAGGGAGTACAATTTTACCAGCATAATTCAGCACATATTATTTCT
GTGGCAGATGTGCAACACCTTAACATTTGATGCGTACAGGCCTTACATTGTACTCCCTCCGTTCCTAAATATTTGTCTTT
TTAGAGATTTCAACAAGTGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAAAATATGTCTTTTTACATTCGTAT
GTGGTAGTTCTTTGAAATCTCTAAAAAGACAAGTATTTAGGAACGGAGGGAGTACTTCTGATCTTCCGTTAAAATGGATA
ACTTATGTTTAAGTAT---TACCTTAATCAGTGCATGGTTTATCGATGTGCATGAAGCTAATATTTCATGATTTT-CCCT
TATTTTGCATGCAGGGCAATACACCCATTAC---------CGTCATCTAGTAAAGCGGTCTAAATTTGTCTGGACTACAG
GAAGCACATATGGCGTGACGTGAAATTGTGGAGCTTGTCGTTGTTTTACTTTCAAATAATACCTGGATTTTGAGTGTTGG
ATAGTCAATTAGTTAATCCCAAATATGTGTGCCACTGCTTGTTATTGTTTGTATAACATGTGTTTTTTTTGTTCTTTTTT
TGAGATGGAGATGCGCGCTTGCAACATGTGTTGTTATATATTTTACTTTTACGACAA------------------TCAAA
CATATGTAAATCAAGTTTCTCTTTGAATAACTTGGTTGCTTGATTGAAATGCTTTGTTCAAAGGCACC-----------C
TGTATTTCTCAACGTTTTGGATCAATTTATGGAACAGATAACAACATACATAGAGATGAAAGATGTTTAATTTACTCCTT
GGAG
>SNPs
-------S-----------------------------S------S------S-----S---S--SS--------------
SSSSS--------S------------------------------------------S-----S----------------S
-----S--------------------S-------S-----------------S---------------------------
-------S---------------------S---------------------------------------------S----
---S--------S----------------------------------------SSSSSSSS-------------------
----------S--S-------------------S-------------SS-------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------SSSSSSSSSSS-------S-----------
-------------S-----S-------------------S-S--------------------------------------
------------------------------------------SS------------------S------------S----
-----------------S--------------------------------------------------------------
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S----------S--------S---------S--------S------------S-S--------S----------------
---S----------------------------------------------------------------------------
----------------------------------------------------S------S--------------------
--------------------------------------------------------------S-----------------
-S-----------S--------------------S------------------------------------SSSSS----
-------------------------------------------------------------------------------S
SSSSS---------------------------------SSSSSSSSSS------S-------------------------
----------SSSSSSS-------------------------------------------------S-------------
--------------S-S--------------------------------S------------------------------
--------SSS---------------------------------------S-----------------------------
-------------S---------------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
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-----------------------------------------------S-----S--------------------------
-------------------------------------S------------------------------------------
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S---------------SSS---------S-------------------S--------------------------S----
--------------------------------------------------------S-S-----------S---------
------------------------------------------------------S-------------------------
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-----------------------------S---------------------S----------S-----------S-----
-----S------S----------------------------------------------------SS-------------
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>forward_374
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----------------------------------CCGGGCTCTAGGCTCTGTAT--------------------------
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>reverse_1294
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-------------ATAGAGGGTCCTGGCTGGTT-----------------------------------------------
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>forward_376
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-----------------------------------CGGGCTCTAGGCTCTGTATTG------------------------
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>reverse_1536
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---------------ATTCAGAAGGCGAGATGGCT---------------------------------------------
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>forward_796
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---------------------------------------------------------CTCTCCGTCGCTCTCCCTA----
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>reverse_1617
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----------------GGAACACTGCCCATGAGAGC--------------------------------------------
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