>input_sequence_74112
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----------------------------------------GTAATTAACCGGCAGCCTTGCGCGCCCCGCCACCAGAACC
CACTAACCGCCGGCCGCGCGGCATGGACAGCACCGTCGACGCAATGGCGGCCGCCTACGACGCGCTGGTCGACGCCGCGG
CGGCCGCCGTCAGCGAGCCCGGGCGCACGGTGGCGCTCACGGACCTTCACCGCTGCCTCGACGCCTTCAACGAGTCCTGC
GACCGAGCCGAGGGCCTCGTCCAGGCGGCCGCCGCCGGCCTCGGCCCCACCGCCTCCCGCCACGACGCGCTGTGCCGCGC
CGTGCGCGCGGTCGACAAGGATCTCCGGGCCGCCGG------CGCCGGCCAGGAGGAGAACGAGATGGACGAGGAGAAGA
ATCGCCCTCCGACCACGCCGCTGGCGGCCGAGGACAGATAGCCCAATCGATCTACCTCGTCTCCCGTTGATATGATGTTC
A----TCGTTCTTGTTTTTTCCATGTGATGTTCATCGTTCTTCTTGGTTTCTTGTTTTTTTTGTGTGTGGCGAAATTCTT
GTTTTCTTGGTTGATGTGACTAGTAAGTGTATCATTAAGAAGTTATGGTTCGCTCTTTTCTAACCTCTCATTCTAAGGGG
TAAGAGCATCTACAACCAGACTGA--------------------------------------------------------
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>chr6A_1_TraesCS6A01G130700
TGTAATAAATCACGGAGATTGCATGCAAAATCTATTGCCCTCGTTGTAAGCAATGGGCTAGTACAAATTATAATTCTGCA
AAGAAAAAGAGTAGTAGGTACTCGTAAGAGCATCTCCAGTAGATAATGCTAATTGGTGTAAATTGGTGATGTAAAAGTGT
AACTCCAATCGATGATGCAAATGGAGATGTAAAACTAATCGGCATGAGCACGGGCGGCCGAGCGTCGAGAGCCGGGAGGA
GCGCCAGCAGACCGACCAGCGGCAGGAGGTGCGCCAGCGGCCGAGCGGCGAGACCCAGGAGGTCGAATGCAGCGTCGGGA
GCTTGAATGTCGACGGCGCAGTTGTGAATCGAGCGGCGAGTTGGTCGCGGTGAGACGGCGGGGTAACGGGCATGCGGTGC
GAGAAGGTCGATCCGGCGGCAGAAAAGCGACAACGGGTGTGCGGCTCGAATCCGGCGCCGGCGGGGCGGCGGGGGGAGCT
CAAATCATATGACGGCGGAGAAACGGCTAATTCGGCCGATTTGGAGGCGGGCGACAACGGAGCAGCGACGGGACCAGAGG
CGGGGGCGGTAGTCGCGACGGCGACCGGCCAGGTGGAGCAAAATCAGGGAGGCTTGGCAGCAGCAGCGTGGAGGCGGAGG
CGGGATTAGGGGCAGTGGTCTCGCCGATGAAGGCCCCGTCGGGGTGGGCGGCTACGGCGAAGAAGGCGGCGGGGTCGGCC
ATGGCCCGAGCGACGGCGAGCAGGCAACTGACGGGTGAGCGGAAGGAAAATGAAAACAAATGGGTAGTTGACACGCGGCC
GTCAGTTTTACATCTTAAAGATGTATTTACATCTCCGTCAGATAAAGATATAATTATGTTTTTATCTAGATCGTCGGTTG
AAAATGGGTTTTTGAGAATAGAAGATGCAAAAGTTAATTACGTTTGCATAGATCTATTGGAGATGAGAATGCAAAAGCGA
AGAGGACTCAACCCAAACCACTCGATCTCGATCGACGCCAGTAATTAACCGGCAGCCTTGCGCGCCCCGCCACCAGAACC
CACTAACCGCCGGCCGCGCGGCATGGACAGCACCGTCGACGCAATGGCGGCCGCCTACGACGCGCTGGTCGACGCCGCGG
CGGCCGCCGTCAGCGAGCCCGGGCGCACGGTGGCGCTCACGGACCTTCACCGCTGCCTCGACGCCTTCAACGAGTCCTGC
GACCGAGCCGAGGGCCTCGTCCAGGCGGCCGCCGCCGGCCTCGGCCCCACCGCCTCCCGCCACGACGCGCTGTGCCGCGC
CGTGCGCGCGGTCGACAAGGATCTCCGGGCCGCCGG------CGCCGGCCAGGAGGAGAACGAGATGGACGAGGAGAAGA
ATCGCCCTCCGACCACGCCGCTGGCGGCCGAGGACAGATAGCCCAATCGATCTACCTCGTCTCCCGTTGATATGATGTTC
A----TCGTTCTTGTTTTTTCCATGTGATGTTCATCGTTCTTCTTGGTTTCTTGTTTTTTTTGTGTGTGGCGAAATTCTT
GTTTTCTTGGTTGATGTGACTAGTAAGTGTATCATTAAGAAGTTATGGTTCGCTCTTTTCTAACCTCTCATTCTAAGGGG
TAAGAGCATCTACAACCAGACTGAACAAATATGACCCGCCCCTATATGTCCACTGACACATCTGTGCAGTTTTCGGAAGT
GTTTGTTTTTGTCCATCAACGCGGCCATGCCCCAAATTGTCATTCACATCAAGAGATATGAACCGGATGGATGCCGGAGG
CTCCTCAGCGATTTGAGCTTCTCGGCCGTCCGATCGTTTTCTTGATTGCGTTTTGGCCGTTGGATCTCGGGCTCGGTCGT
CGTGGGCCGTCGGATATTTACCGGATCGTTGTGAGCCGTTAGATAAAATTCAGTGTGCCCCGGTCGTGCCACCGCGCGTA
ATTCCAGCGCCCCCACGAGGGCATTTTCGTCATTTCACCTAGTGGGAGAAATGCCCAATAGCGCTGAGGTGAGTCCGTGG
ACAGCGAGCACCGGATCGTTCCCCTCCCCCTCCCGCTCGCTCGCTCTCCTCTCCTCCCCGCCCCCTCCCTCAAAACCCTA
GCCGCCGCTACCCATCGCGCCCTACAGCGCCGCCGCTCTCGCGACGCCGTCGCTGCTCTCCTCTCCCTCTCTCCGACCCG
AGCCGCCGCCCTCCTCTGCGTCTCCGACCTCCTCCCCATGGGATTGCAACAGAGCCCCCCAGCAATGACGACGAGCAGCA
GCGGAGGGAGGACGAGGAGCACGACGGCGGCAGTGGGGAGCAGCAGCAGCAGGCCAAGGTGGCGCTGCCCTTCTCCGCCA
TGTGCGTGCGGATCTCCCGCAACACCTACCCCAACCTCCGCGCCCTCCGCAACGCCTCCCATGTCGGTCTCACCGACGCC
CCACATGTCAAGATCTCCGAGGGCGACTTCGGACACATCCTTGACGACGTGCCCCACCTCGCTGACTACTACATTCCGGT
GAGCAGCC-CCCTCCCCCTAACCTGCTCCTCCTCACTCGACCGCGAGTCATGGTTCGCTGTGACCTGCGGGTGCCATCGT
TTCAGCTCGTGGTGATTGGTTTTGTGCGGTGCAGCTTTAGCTAAGCGACTGTCAGTACGAGCGAA
>chr6B_946
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-----------------------------------------------------------------AGAGTGCAAAAGCAA
AGAGGACTCAACACAAGCCACTCGATCTCGATCGACGCCAGTAA----CCGCCAGCCCCGCGCGCCCCGCCACCAGAAAC
CACTAACCGCCGGCCGCGCTCCATGGACAGCACCGTCGAAGCAATGGCGGCCGCCTACGACGCGCTGGTCGACGCCGCGG
CCGCCGCCGTCCGCGAGCCCGGCCGGTCGGCGGCGCTCACGGACCTCCACCGCTGCCTCGACGCCTTCAGCGACTCCTGC
GACCGAGCCGAGGGCCTCGTCCAGGCGGCCGCCGCCGGCCTCGGCCCCGCCGCCGCCCGCCACGACGCGCTGTGCCGCGC
CGTGCGCGCGGTCGACAAGGATCTCCGGGCCGCCGG------CGGCGGCCAGGAGGAGAACGAGATGGACCAGGAAAAGA
ATCGCCCTCCGACCACGCCGCTGGCGGCCGAGGACAACTAGCCCAATCGATCCACCTCGTCTCCCGTTGATGTGATGTTC
A----TCGTTCTTGTTTTTTCCATGTGATGTCCATCGTTCTTCTTGGTTTCTTGGTT-----------------------
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>chr6D_946
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-----------------------------------------------------------------AGAGTGCAGATGCAA
AGAGGACTCAACACAAGCCACTCGATCTCGATCGACGCCAGTAA----CCGCCAGCCTCGCGCGCCCCGCCACCAGAAAC
CACTAACCGCCGGCCGCGCGCTATGGAGAGCACCGTCGACGCAATGGCGGCCGCCTACGACGCGCTGGTCGACGCCGCGG
CCGCCGCCGTCCGCGAGCCCGGTCGCACGGTGGCGCTCACGGACCTCCACCGCTGCCTCGACGCCTTCAGCGAGTCCTGC
GACCGAGCCGAGGGCCTCGTCCAGGCTGCCGCCGCCGGCCTCGGCCCCGCCGCCTCCCGCCACGACGCGCTGTGTCGCGC
CGTGCGCGCGGTCGACAAGGATCTCCGGGCCGCCGCCGCCGCCGGCGGCCAGGAGGAGAACGAGATGGAGCAGGAAAAGA
ATCGCCCTCCGACCACGCCGCTGGCGGCCGAGGACAAATAGCCCAATCGATCTATCCCGTCTCCTGTTGATGCGATGTTC
ATCGGTCGTTCTTGTTTTTTCCATGTGATGTTCATCGTTCTTCTTGGTTTCTTG--------------------------
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>chr4A_1714
TCAAT---------------------------------------------------------------------------
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-------------------------------------------------CAAGAGATATGAACCGGATGGATGCCGGAGG
CTCCTCAGCGATTTGAGCTTCTCGGCCGTCCGATCGTTTTCTTGATTGCGTTCTGGCCGTTGGATCTCGGGCTCGGTCGT
CGTGGGCCGTCGGATATTTACCGGATCGTTGTGAGCCGTTAGATAAAATTCAGTGTGCCCCGGTCGTGCCACCGCGCATA
ATTCCAGCGCCCCCACGAGGGCATTTTCGTCATTTCACCTGGTGGGAGAAATGCCCAATAGCGCTGAGGTGAGTCCGTGG
ACAGCGAGCACCGGATCGTTCCCCTCCCCCTCCCGCTCGCTCGCTCTCCTCTCCTCCCCGCCCCCTTCCTCGAAACCCTA
GCCGCCGCTACCCATCGCGCCCTACAGCGCCGCCGCTCTCGCGACGCCGTCGCTGCTCTCCTCTCCCTCTCTCCGACCCG
AGCCGCCGCCCTCCTCTGCGTCTCCGACCTCCTCCCCATGGGATTGCAACAGATCCCCCCAGCAATGACGACGAGCAGCA
GCGGAGGAAGGACGAGGAGCACGACGGCGGCGGCGGGGAGCAGCAGCAGCAGGCCAAGGCGGCGCTGCCCTTCTCCGTCA
TGTGCGTGCGGATCTCTCGCAACACCTACCCCAACCTCCACGCCCTCCGCAACGCCTCCCACGTTGGTCTCACCGACGCC
CCACATGTCAAGATCTCCGAGGGCGACTTCGGACACATCCTTGACGACGTGCCCCACCTCGCTGACTACTACGTTCCGGT
GAGCAGCCCCCCTCCCCCTAACCTGCTCCTCCTCACTCGACCGCGAGTCATGGTTCACTGTGACCTGCGGGTGCCATCAT
TTCAGCTCGTGGTGATTGGTTTTGTGCGGTGCAGCTTTAGCTAAGTGACTGTCAGTACGAGCGAA
>chr5A_1718
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-----------------------------------------------ATCAAGAGATATGAACCGGATGGATGCCGGAGG
CTCCTCAGCGATTTGAGCTTCTCGGCCATCCGATCGTTTTCTTGATTGCATTCTGGCCGTTGGATCTCGGGCTCGGTCGT
CGTGGGCCGTCGGATATTTACCGGATCGTTGTGAGCCGTTAGATAAAATTCAGTGCGCCCCGGTCATGCCACCACGCGTA
ATTCCAGCACCCCCACGAGGGCATTTGTGTCATTTCACCTGGTGGGAGAAATGCCCAATAGCGCTGAGGTGAGTCCGTGG
ACAGCGAGCACCGGATCGTTCCCCTCCCCCTCCCGCTCGCTCGCTCTCCTCTCCTCCCCGCCCCCTCCCTCGAAACCCTA
GCCGCCGCTACCCATCGCGCCCTACAGCGCCGCCGCTCTCACGACGCCGTCGCTG-------------CTCTCCGACCCG
AGCCACCGCCCTCCTCTGCGTCTCCGACCTCCTCCCCATGGGATTGCAACAGAGCCCCCCAGCAATGACGATGATCAGCA
GCGGAGGGAGGACGAGTAGCACGACGGCGGCGGCGGGGAGCAGCAGCAGCAGGCCAAGGCGGTGCTGCCCTTCTCCGCCA
TGTGCGTGCGGATCTCCCGCAACACCTAGCCCAACCTCCGCGCCCTCCGCAATGCCTCCCACGTCGGTCTCACCGACGCC
CCACATGTCAAGATCTCCGAGGGCGACTTCGGACACATCCTTGACGACGTGCCCCACCTCGCTGACTACTACGTTCCGGT
GAGCAGCCCCCCTCCCCCTAACTTGCTCCTCCTCACTCGACCGCGAGTCATGGTTCGCTGTGACCTGCGGGTGCCATCGT
TTCAGCTCGTGGTGATTGGTTTTGTGCGGTGCAGCTTTAGCTAAGCGACTGTCAGTACGAGCGAA
>chr3A_1735
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----------------------------------------------------------------GGATGGATGCCGGAGG
CTCCTCAGCGATTTGAGCGTCTCGGCCGTCCGATCGTTTTCTTGATTGCGTTCTGGCCGTTGGATCTCGGGCTCGGTCGT
CGTGGGCCGTCGGATATTTACCGGATCGTTGTGAGCCGTTAGATAAAATTCAGTGCGCCCCGGTTGTGCCACCGCGCGTA
ATTCCAGCGCCCTCACGAGGGCATTTTCGTCATTTCACCTGGTGGGAGAAATGCCCAATAGCGCTGAGGTGAGTCCGTGG
ACAGCGAGCACCGGATCGTTCCCCTCCCCCTCCCGCTCGCTCGCTCTCCTCTCCTCCCCGCCCCCTCCCTCGAAACCCTA
GCCGCCGCTACCCATCGCGCCCTACAGCGCCGCCGCTCTCGCGACGCCGTCGCTGATCTCCTCTCCCTCTCTCCGACCCG
AGCCGCCGCCCTCCTCTGCGTCTCCGACCTCCTCCCCATGGGATTGCAACAGAGCCCCCCAGCAATGAGGACGAGCAGCA
GCGGAGGGAGGACGAGGAGCACGACGGCGGCGGCGGGGAGCAGCAGCAGCAGGCCAAGGCGGCGCTGCCCTTCTCCGCCA
TGTGCGTGCGGATCTCCCGCAACACCTACCCCAACCTCCGCGCCCTCCGCAACGCCTCCCACGTCGGTCTCACCGACGCC
CCACATGTCAAGATCTACGAGGGCGACTTCGGACACATCCTTGACGACGTGCCCCACCTCGCTGACTACTACGTTCCGGT
GAGCAGCCCCCCTCCCCCTAACCTGCTCCTCCTCACTCGACCGCGAGTCATGGTTCGCTGTGACCTGCGGGTGCCATCGT
TTCAGCTCGTGGTGATTGGTTTTGTGCGGTGCAGCTTTAGCTAAGCGACTGTCAGTACGAGCGAA
>SNPs
-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---------S-
------------S---S---------------------------SSSS---S------S-------------------S-
--------------------S-----------------------------------------------------------
-S---------S----------S-----------------------S----------------------S----------
------------------------------------------------S-------------------------------
--------------------------------------------S-------------------------S----S----
------------------------------------S----------------------------------S--------
------------------------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------
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-------------------------------S-S-------------------------S--------------------
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>forward_614
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----------------------------------GGAGCAAAATCAGGGAGGCT--------------------------
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>reverse_1686
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-----TTTTTGTCCATCAACGCGGC-------------------------------------------------------
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