>input_sequence_74108
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------------------------------------CTATAAAATCCATGTGAATTAGACGATCATCAATCTCACACACA
AGTTGAATAGTCGATCATCTCAAGAGATGGGGACTATTACTGTT---GGATTCCATCTTTTTTTTCTCATTCCCACAATT
GCATTGCACGCCCATGCCTCATCTCAGGAGGCGCATCTCACAAAGTTCCTCTCGTCTAAAAGATCCAGAAGCAACATCAG
CAACAAAATTGGTGATCCTACTAGTTTCCATGGCGGATCATTTCTCGGAATCGCCAGCAGCCCCCGAACAGATGGGTACT
CAGGCTCCGACCACATCGCTATGAAGGCGGCCGACAAGATCTCGGCGCTACCAGGACAGCCGGAGGGCGTCGACTTCGAC
CAGTACGGCGGGTACGTGACTGTCGACGACCATAATGGCCGCGCACTCTTCTATTACTTCGTGGAATCTCCCGGCAACCC
GATGGCGAAGCCACTCCTCCTATGGCTCAACGGAGGTGAGGAAGATACACTCTACTACTAGTAGCTAGCTAGTACCATTG
CGTATTGTTGAACACTATATTTGGTAAATTGCTCAAAATGTTCTAAAAAAATACATTCGAAATGCATAATGAATTGATAC
GATCTTTCAAAAA-------------------------------------------------------------------
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----------------------------------------------------------
>chr4A_1_TraesCS4A01G300200
TAGCTTGATGGTTGCTTGATAACACGCTTGCAATGGTAGCCATCGGTGTCATGTTGATAGCCAGTGCAAGACTTGAAAAA
TGTCAGTGACAGCTTAACAAGCACCGGGAAGTGATTGCCTTGCATTCAGACTTGAACTTAACGAAAAAAAGAAAAGGTTC
ATACAATTTTCTTCTACTTCACCTTTTCCCGAGTGAAGTCCAGTGGTCGAAGTAGAAATACCATTTGGTTTGGCTATACC
GTAATCTGTAAAATGAGTTGAAATAAGATCGAGCGGTATGAGATCTTGAGCCTTTGTGATCGCATAGTGTTTGTCTCCAA
GGAATGCAATGTCCATTATATATTCCTATGTC-TTTTTTCTGGCTCAGGCAACCACACACCATTTCCTTGCTGAAATACG
GTCGACAGGTAGTTCATATTGTTTGTCAGGGCGACAATGAAGTTGTC-AGGGGAAACTTTATGAGAAGCTTTGCAAGTCT
TGTGGAATACGACCGTGTCTAGCACCATGAGAAACATAGA-TTGCTGGAGAGAGTTTTGCGTAAGAGGAAGTTGTGTAGT
ATG--TTTTCATGCGTCACTAGAGGCATAGATGTCACTGAGATCAAGGGGAAGCTAGTTGTCAAAGGAGTCAATAAAGAT
GCCATCTTCAGGGAAAGAAGGGAGGCGGTGCCAGCGACCATTGGAGGGAGTGAATACATAGCCATCCTCTAGTACGATCC
GCGACAATTAGGGAGTCGCCCGTTCCCTTATCTTTTGCACACTACAAAAAGTTTCGATCATTTTCACAATAAAAATAAAT
ATTGACCATATTTATTTATTTTCAGA------------TGTTTACATTGTTTTG----GTAAATGAGTGCTATTAAAGCA
TTGATTTTGCCATAAATAATAGCTACAGAAACAGCGGATTTCACCTGCATGTGTCAAAAGCATATTATGGCAGTACATTA
ATTTGGATTTGATCTTGCTCAGATGGCATCTTTTCTCTCCCTAGCTACCTA-----------------------------
--------------------------ACTCCATGACCTATAAAATCCATGTGAATTAGACGATCATCAATCTCACACACA
AGTTGAATAGTCGATCATCTCAAGAGATGGGGACTATTACTGTT---GGATTCCATCTTTTTTTTCTCATTCCCACAATT
GCATTGCACGCCCATGCCTCATCTCAGGAGGCGCATCTCACAAAGTTCCTCTCGTCTAAAAGATCCAGAAGCAACATCAG
CAACAAAATTGGTGATCCTACTAGTTTCCATGGCGGATCATTTCTCGGAATCGCCAGCAGCCCCCGAACAGATGGGTACT
CAGGCTCCGACCACATCGCTATGAAGGCGGCCGACAAGATCTCGGCGCTACCAGGACAGCCGGAGGGCGTCGACTTCGAC
CAGTACGGCGGGTACGTGACTGTCGACGACCATAATGGCCGCGCACTCTTCTATTACTTCGTGGAATCTCCCGGCAACCC
GATGGCGAAGCCACTCCTCCTATGGCTCAACGGAGGTGAGGAAGATACACTCTACTACTAGTAGCTAGCTAGTACCATTG
CGTATTGTTGAACACTATATTTGGTAAATTGCTCAAAATGTTCTAAAAAAATACATTCGAAATGCATAATGAATTGATAC
GATCTTTCAAAAAATAAATAATGGATTGATATGGAGCATGCATGCAGGGCCTGGGTGCTCGTCGTTGGGCTTCGGAGCGA
TGCGAGAATTGGGTCCTTTCCGGGTGAACAGAGACAACCAAACTCTCACTAGGAACAACCATGCCTGGAACAATGCCTGT
AAACAGCTTTGAGCTTTACAAGCATATCTTGGTTAAGATTGCTGCTCCTGGGACTTGAGTAAATTGCAGATTGGTTAGCG
GCGGTTTATACAAACAAGAAAAA-GATTCATTTGGGATGAACATCGAGGCGACTCACCAAAGATAGCAGAAACCATCTGA
GATATACGGTGTTTTAAGCCGGTGAGATCCGTGGTCACCTCTTGAAGAGCCGCCTCTGCTTTTTCAGCTCACTGCGTCAA
AGCAGTCTTCTCTTCAGCCCATGTTTTTCTTTCTGCATCGAAGCTGGTTTTCAG-TTTCTCCGTCTCAGATATGCTGAAT
GGGAATTTTGAAAATGCCTTCTGGGTCTCAGATTCTTGACTTGCTAGCCGGGTCTTTGCATCAGTAAATTGTGATTCAAG
TTT-AGCAGTAGCAGCCTGTATGAAATACAGAGCTGTCAACATGTTCACATCAGGGTTACAGGAATATAAGTCCCAAGTC
TTTTGCAAGCAACAACACTTGGCACTTGGGGGCTAATGGCTGCCGAAAAA--TTCAGTCATAACAAACAATTCACGTGAA
TAAGTCCCAAGCACTTTGCAAGCAAGACTACTTGGCACTTGGGGGCTAATGCACATCGATTGAGTTTTCTTACTATTTTA
TGATGACCCGGTTGTGCTGTAAACAATCACAGCCGGCTCATGGGGGCTACACAGATAAGCTTTCACTTTTAAACAATGGT
AAACAGAACCGGCTCATTCATGCCGATTAAACCGACCCTTGGGGACTACGGATGCAATGCTAAATTGTTTAAACATCTGG
TTTAATTCTAACTATGACAACCGGCTTTGGAAGGATTCTACTATAGATGCTTATGGAT
>chr4D_1
TAGCTTGATGGTTGCTTGATAACACCCTTGCAATGGTAGCCATGGGTCTCATGTTGATAGCCAGTGCAAGACTTGAAAAA
TGTCAGTGACAACTTAACAAGCACCGGGAAGTGATTGCCTTGCCATCAGACTTGAACTTAACGAAAAAAAGGAAAGGTTC
ATACAATTTTCTTCTACTTCACCTTTTCCTGAGTAAAGTCTAGTGGTCGAAGTAGAAATACCATTTGGTTTGGCTATACC
GTAATCTGTAAAATGAGTTGAAATAAGATCGAGCGGTATGAGATCTCGAGCCTTTGTGATCGCATAGTGTTTGTCTCCAA
GGAATGCAATGTCAATTATATATTCCTATGTCTTTTTTTCCGGCTCAGGCAACCACACACCATTTCCTTGCTGAAATACG
ATCGATAGGTAGTTCGTATTGTTTGTCAGGGCGACAATGAAGTTGTC-GGGGGAAACTTTATGAGAAGCTTTGCAAGTCT
TATGGAAAACAACCGTGTCTAGCACCATGAGAAACATAGACTTGCTGGAGAGAGTTTTGCATAAGAGGAAGTTGTGTAGT
ATGTATTTTCATGCGTCACTAGAGGCATAGATGTCATTGAGATCAAGGGGAAGCTAGTTGTCAAAGGAGTCAATACAGAT
GCCACCTTCAGGGAAAGAAGGGAGGCGGTGCCAGCGACCATTGGAGGGAGTGAATACATAGCCATCCTCTAGTACGATCC
GCGACAATTAGGGAGCCGCCCGTTCTCTTATCTTTTGCACACTACAAAAAGTTCCGATCATTTTCACAATAAAATAAAAT
ATTGACCATATTTATTTATTTTCAGA------------TGTTTACATTGTTTTG----GTAAATGAGTGCAATTAAAGCA
TTGATTTTGCCATAAATAATAGCTATAGAATCAGCGGATTTCACCTGCATGTGCCAAAAGCATATTATGGCAGTACATTA
ATTCGGATTTGATCTTGCTCAGATGGCATCTTTGCTCTCCCTAGCTACCTA-----------------------------
--------------------------ACTCCATGACCTATAAAATCCATGTGAATTAGACCATCATCGATCTCACACATA
AGTTGAATAGTTGATCATCTCAAGAGATGGGGACTATTACTGTT---GGATTCCATCTTTTATTTCTCATTCCCACAATT
GCATTGCACGCCCATGCCTCATCTCAGGAGGCGCATCTCACAAAGTTCCTCTCGTCTAAAAGATCCAGAAGCAACATCAG
CAACAAAATTGGTGATCCTACTAGTTTCCATGGCGGATCATTCCTCGGAATCGCCAGCAGCCCCCGAATAGATGGGTACC
CGAGCTCCTACCACATCGCTCTGAAGGCGGCCGACAAGATCTCGGCGCTGCCAGGGCAGCCGGAGGGCGTCGACTTCGAC
CAGTACGGCGGGTACGTGACTGTCGACGGCCATAATGGCCGCGCACTCTTCTACTACTTCGTGGAATCTCCCGGCAACCC
GGTGACGAAGCCACTCCTCCTGTGGCTCAACGGAGGTGAGGAAGATACACTCTACTACTAGTAGCTAGCTAGTACCATTG
TGTATTGTTGAACAC--TATTTGGTAAATTCCTCAAAATGTTCTAAAAAA-TACATTAGAAATGCACAATGAATTTATAT
GATCTTTCAAAAAAAA---AATGGATTGATATGGAGCATGCATGCAGGGCCTGGGTGCTTGTCGTTGGGCTTCGGAGCGA
TGCGAGAATTGGGCCCTTTCCGGGTGAACAGAGACAACCAAACCCTCACTAGGAACAACCATGCCTGGAACAATG-----
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>chr4B_243
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--AACCTGTAAAATGACTTGAATTAAGATTGGGCGGTATGAGATCTCGAGCCTTTGTGATCGCATAGTGTTTGTCTCCTC
CTATG--------------------------C-TTTTTTCCGGCTCAGGCAACCACACACCATTTCCTTGCTAAAATGTG
TTCGACAGGTAGTTCGTGTTGTTTATCACGGCGACAATGAAGTTGTCGGGGGGAAACTTCATGAGAAGCTTTGCAAGTCT
TATGGAAAACGACCGTGTCTAGCACCATGAGAAACATAGACTTGCTGAAGAGAGTGTTGCGTAAGAGGAAGTTGTGGAGT
ATGTATTTTCGTGCATCACTAGAGGCATAGATGTCACTGA----------------------------------------
--------------------------------------------AGGGAGTATATACATAGCCATCCA------------
---------------------------TTATCTTCTGCCCACTACAAAAAGTTTCGATCGTTTCCACAATAAAATAAAAT
ATTGACCATACTTATTTATTTTCAGATGTCTGCTTGCGTGTTTACATTATTTTGGTACGTAAATGAGTACAATTAAAGCA
TTGATTCTGCCATAAATAATAGCTACAGAAACAGCGGATTTCGCCTGCATGTGTCAAAAGCATATTATGGCAGTACATTA
ATTCGGATTTGATCTTGCTCAGATGGCATCGTTGTTCTCCCTAGCTACCTA-----------------------------
--------------------------TCTCCATGACCTATAAAATCCATGTGAATTAGACCATCATCGATCTCACACATA
-GTTGAATAGTCGATTGTCTCAAGAGATGGGGACTATTACTGCT---GGATTCCATCTTTTATTTCTCATTCCCACAATT
GCATTGCATGCCCATGCCTCATCTCAGGAAGCGCATCTCACAAAATTCCTCTCGTCTAAAAGATCCAAAAGCAACATCAG
CAACAAAATTGGTGATCCTACCGGTTTCCATGGCGGACCATTTCTCAGAATCACCAGCAGCCCCCGAACAGATGGGTACC
CGGGCTCCAACCACATCGCTCTGAAGGCGGCCGACAAGATCTCGGCGCTGCCAGGGCAGCCGGAGGGCGTCGACTTCGAC
CAGTATGGCGGGTACGTGACTGTCGACGGCCATAATGGCCGTGCACTCTTCTACTACTTCGTGGAATCTCCCGGCAACCC
GGCGGCGAAGCCACTCCTCCTGTGGCTCAACGGAGGTGAGGAAGATACACTCTACTACTAGTAGCTAGCTAGTACCATTG
CGTATTGTTGAACACTATATGCCGGTTTGGATTAAT--------------------------------------------
----------------------------ATATGGAGCATGCATGCAGGGCCTGGGTGCTCGTCGCTGGGCTTTGGAGCGA
TGCGTGAATTGGGCCCTTTCCGGGTGAACAGAGACAACCAAACCCTCACTAGGAACAACCATGCCTGGAACAA-------
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----------------------------------------------------------
>chr4D_822
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--------------------------------------TGTTTACATCGTTTTG----GTAAATGAGTGCAATTAAAGCA
TTGATTCTACCATAAATAATAGCTAGAGAAAGCACGAATTTCAC---CATGTGATAATGGCATATTATGGCAGTACATTA
ATTTGGATTTGATCTTGCTCAGATGGCATCCTTGCATACACTCGAAAAGAAAAGAGAAAACTAACACAAATTGCTTTGTT
TGGTGTCGTTGTACCCTCTTGCTCCCACTGCATGGCCTATAAAAACCATGCGAATTAGACAACCATCTACCCCACGCACA
CTC-GAATAGTCGATCATCTTGGGAGATGGGCACTATTACTGCTGCTGGATTCCACGTTTTATTTCTCATTCCCATAATT
GCATTGCACGCCCATGCATCATCTCAGGAGGCCCATCTCACAGAATTCCTCTTATCTAGAAAATCCAGAAGTAGCAGCGG
CAGCACAATTAGTGATT---CTATTTTCCATGGCGGATCTGTTCCCGTAATCACCAACAGCCTCCGAACAGATGAGTACC
CCAACTCCGACCG---CGCTCTAAAGGCGGCCGACAAGATCCCGGTGCTGCCGGGGCAGCCGGAGGGTGTCGACTTCGAC
CAGTACGCCGGGTATGTCACCGTCGACGGCCACAACGGCCGTGCGCTCTTCTACTACTTCGTGGAAGCGCCTGGCGACAA
GGCGGCGAAGCCACTCCTCCTCTGGCTCAACGGAGGTGAGTAG----------------------TATCTAGTACCGCTG
GGAATTGTTGAACAATATGTTTGGTAAATTTGTCAAAAATTTCATTTGCAAAACTTTTTAGAAGAATATATACATGTAGA
AATCAC-------------AACGGATTGATATGGAGCATGCATGCAGGCCCTGGATGCTCGTCGCTGGGCTTGGGAGCGA
TGCGAGAATTGGGTCCTTTCCGTGTGAACAGAGACAACCAAACCCTCACTAGGAACAAGCATGCCTGGAACAA-------
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>chr7A_1759
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-----------------------------------------------------------------------------TGT
AAATAGCTTTGAGCTTCACAAACATATCTTGGTTAAGATTGTTGCTCCTGGGACCTGAGTAAATTGCATATTGATTAGCG
GCGGCTTATACAATCAAGAAAAA-GATTAACTTGGGATAGACAGCGAGGTGACTCACCAAAGATAGCAGAAACCATCTGA
GATATACGGTGTTTTAAGCCGGTGAGTTCAGTGGTCACCTCCTGAAGAGCCGCCTCTGCTTTCTCAGCTCGCTGCGTCAA
AGCAGTCTTTTCTTCAGCCCACGTTTTTCTTTCTGCATCAAAGCTGGTTTTCAG-TTTTTTTGTCTCAGATATGCTGAAT
TGGAATTTTGACTCAGCCTTCTAGGTCTCAGATTCTTGACTCACCAGCCGTGTCTTTGCATCAGTCAATTGTGATTCAAG
TTC-AGCAGTAGCAGCCTATATGAAATTCAGAGCTGTCAACATGTTCACATCAGGGTTACAAGAATATAAGTCCCAAGTC
TTTTGCAAGCAACAATAGTTGGCACTTGGGGGCTAATGTCTGCCGAAAAA--ATCAGTCAT-AAAAATGATTTATTTGAA
TAAGTCACAAGCACTTTGCAAGCAAGATTACTTGGCACTTGGGGGCTAATGCATATCGCTTGAGTTTTCCTACTATATTA
TGATGACCCTGTTGTGCTGTAAACAATCACAGCCGGCTCATGGGGGCTACACAGATAAGCTTTCACTTTTAAACAATGGT
AAATAGGACCGGCTCATTCATACTGATTAAATCGGCCCTTGGGGACTACGGATGCAATGCTAAATTGTTTAAACATCCGG
TTTAATTCTAACTATGACAACCGGCCTTGGAAGGATTCTACTACAGATGCTTATGGAT
>chr7A_1759
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-----------------------------------------------------------------------------TGT
AAACAACTTTGAGATTCAAAAGCATATCTTGGTTAAGATTGCTGCTCCTAGGACCTGAGTAAATTGCAGATTGGTTACTG
GTGGTTTATATAATCAAGAAAAA-GATTCACTTGGGATGGACAGTGAGGCGACTCGCCAAAGATAGCAGAAACCATCTGA
GATACACGGTGTTTTAAGCCTGTGAGCTCAGTGGTCACCTCTTGAAGAGCCACCTCTGCTTTCTCAGCTTGCTGCGTCAA
AGCAGTCTTTCCTTCAACCCAAGTTTTTCTCTCTGCATCAAAGCTGGTTTTCAG-TTTTTCCGTCTCAGATATGCTGAAT
TGGAATTTTGACTCAGCCTTCCGGGTCTCAGATTCCTGATTCGCCAGCCAGGTCTTTGCATCAGTCAATTGTGATTCAAG
TTC-AGCAGTAGCAGCCTGTATGAAACACAGAGTTGTCAACATGTTCATATTAGGGTTCCAGGAATATAAGTCCCAAGTC
TTTTGCAAGCAACAACACTTGGAACTTGGGGACTAATGCTTGCCAAAAAC--TTAT-TCATACAAAATGGCTCATGTGAA
TAAGTCCCAAGCACTTTGCAAGCAAGAATACTTGGCACTTGGGGGCTAATGCATATCGCTGGTGTCTTCCTACTATTTTA
TGATGACCCGGTTGTGCTGTAAACAATCACAGCCGACTCATGGGGGCTACACGGATAAGCTTTCATTTCTAAACAATGGT
AAATAGGACCGGGTCATTCATGCTGATTAAACCGGCCCTTGGG-ACTACAGATGCAATGCTAAATTGTTTAAACATCTGG
TTTAATTCTAGCGATGACAACCGGCCTTGGAAGGATTCTACTACAGATGCTTATGGAT
>chr7A_1759
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-----------------------------------------------------------------------------TGT
AAACAGCTTTGAGCTTCAAAAGCGTATCTTGGTTAAGATTGCTGCTCCTGGGACCTGAGTAAATTGCAGATCGGTTAGCG
GTGGTTTATACAATCAAGAAAAA-GATTCACTTGGGATGGACAGCGAGGCGACTCACCAAATATAGCA-AAACCATCTGA
GATACATGGTGTTTTAAGCCAGTGAGCTCAGTGGTCACCTCTTAAAGAGCCGCCTCTGCTTTCTCAGCTCGCTGCGTCAA
AGCAGTCTTTTCTTAAGCCCAAGTTTTTCTCTCTGCATCAAAGCTGGTTTTCAG-TTTTTCCGTCTCAGATATGCTGAAT
TGAAATTTTGACTCAGCCTTTTGGGTCTCAGATTCCTAATTCACCAGCCGGGTCTTTGTATCAGTCAATTGTGATTCAAG
TTC-AGCAGTAGCAGCCTGTATGAAACACAGAGTTGTCAACATGTTCATATCAGGGTTACAGGAATATAAGTCCCAAGTC
TTTTGCAAGAAACAACACTTTGAACTTGGGGACTAATGCCTGCCGAAAAAAATTAT-TCATACAAAACGGCTCATGTGAA
TAAGTCCCAAGCACTTTGCATGCAAGAATATTTGGCACTTGGGGGCTAATGCATATCACTGGTGTCTTTCTACTATTTTA
TGATGACCTGGTTGTGGTGTAAACAATCACAGCCGACGCATGGGGG-TACGCAGAAAAGCTTTCATTTCTAAACAATGGT
AAATAGGACCGGCTCATTCATGCTGATTAAACCAGCCCTTGGGGACTATGGATGCAATGCTAAATTTTTTAAACATCCGG
TTTAATTCTAACTATGACAACCGGCCTTGGAAGGATTCTACTACAGATGCTTATGGAT
>chr3A_1759
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-----------------------------------------------------------------------------TGT
AAACAGCTTTGAGCTTTACAAGCACATCTTGGGTAAGATTGCTGCTCCTGGGACCTGAGTAAATTGCCGATTGGTTAGCG
GCGGTTTATACAATCAAGAAAAA-GATTCACTTGGGATGGACAGTGAGGTGACTCACCAAAGATAGCAGAAACCATCTGA
GATACATGGTGTTTTAAGCCGGTGAGCTCAGTGGTCACCTCCTGAAGAGCCGCCTCTGCTTTCTCAGCTCGCTGCGTCAA
AGTAGTCTTTTCTTCAGCCCACATTTTTCTTTCTGCATCAAAGCTAGTTTTCAG-TTTTCCTGTCTCAGATATGCTGAAT
TGGAATTTTGACTCAACCTTTCGGGTCTCAAATTCTTGACTCACTAGCCGGGTCTTTGCATCAGTCAATTGTGATTCAAG
TTC-AGCAGTAGCAGCCTGTATGAAATACAGAGCTGTCAACATGTTCACATCAGGGTTACAAGAATATAAGTCCCAAGTC
TTTTGCAAGCAATGACACTTGGCACTTGGGGGCTAATGCATGCTGGAAAA--TTCAATCATACAAAACGATTCATGTGAA
TAAGTCCCAAGCACTTTGCAAGCAAGACTACTTGGCACTTGGGGGCTAATGCACATCGCTTGAGTCTTCCTACTATTTTA
TGATGACCCGGTTGTGCTATAAACAATCACAACTAGCTTATGGGGGCTACACAGATAAGCTTTCATTTTTAAACAATGGT
AAATAGTACCGACTCATTCATGCTGATTAAACCGGCCCTTGGGGACTATGGATGCAATGCTAAATTGTTTCAATATCCGG
TTTAATTCTAACTATGACAACCGGCCTTGGAAGGATTCTACTACAAATGCTTATGGAT
>chr3A_1759
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-----------------------------------------------------------------------------TGT
ACACAGCTTTGAGTTTCACAAGCATATCTTGGTTCAGATTGTTGCTCCTGGGACCTGAGTAAATCACAGATTAATTAGCG
GTGGTTCACATTATCAAGTAAAG-GATTCACTTTTGATGATTAGCAAGGCGACTCACCAAAGATAGCAGAAACCATCTGA
GATACACGGTGTTTTAAACCGGTGAGCTCAGTGGTCACCTCTTGAAGATCCGCCTCTGCTTTTTCAGCTCGCTGTGTTAA
AGCAGTCTTTTCTTCAACCCAAGTTTTTCTCTCCGCCTCAAAGCTGGTTTTCAG-TTTGTCCGTCTCAGATATGCTGAAC
TGGAATTTTGACTCAGCCTTCTAGGTCTCATATTCATGATTCGCCAGCCGGGTCTTTGCATCAGTCAATTGTGATTCAAG
TTA-AGCAGTAGCAGCCTGTATGAAACACATGGTTGTCAACATGTTTATATCAGGGTTATAGGAATATAAGTCCCAAGTC
TTTTGCAAGCAACAACACTGGGCACTTGGGGGCTAATGCCTACCAAAAAA-TTTAT-TCATACAAAACGACTCATGTGAA
TAAGTCCCAAGCACTTTGCAAGCAAGGCTACTTGGCACTTGGGGGCTAATGCATATCTCT--TGTCTTCCTACTATTTTA
TGATGACCCGGTTGTGCTGTAAACAATCACAGTTGGTTCATGGGGGCTACACAGATAATCTTTCATTTTTAAACAATGGT
AAATAGGACCGACTCATTCATGCTGATTAAACTGGCCCTTGGGGACTATGGATGGAATGCTAAATTGTTTAAACATCCGG
TTTAATTCTAACTATGACAACCGGCCTTGGAAGGATTCTACTACAGATGCTTATGGAT
>chr6A_1759
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-----------------------------------------------------------------------------TGT
AAACAGCTTTGAGCTTTACAAGCATATCTTGGTTAAGATTGCTGCTCCTGGGACCTGAGTAAATTGTAGATTGGTTAGCG
GCAGTTTATACAATCAAGAAAAAAGATTCATTTGGGATGGACAGCGGGGCGACTCACAAAAGATAGCAGAAACCATCTGA
GATATACGGTGTTTTAAGCCGATGAGCTTAGTGGTCACCTCTTGAAGAGCCACCTCTGCTTTTTCAGCTTGCTGCGTCAA
AGCAGTCTTCTCTTCAGCCCAC-TTTTTCTTTCTGCATCAAAGTTGGTTTTCATTTTTTTCCATCTCAGATATGCTGAAT
TGGAATTTTGACTCAGCCTTCTGGGTCTCAGATTCTTGACTCGCCAGCCGGGTCTTTGCATCAGTCAATTGTGATTCAAG
TTC-AGCAGTAGCAGCGTATGTGAAATACAGAGCTGTCAACATGTTCACATCAGGGTTACAGGAATATAAGTCCCAAGTC
TTTTGCAAGCAACAACAATTGGCACTTGGGGGCTAATGCCTGCCGAAAAA--GTCAGTCATAAAAAACGATTCATGTCAA
TAAGTCCCAAGCACTTTGCAAGCAAGACTACTTGGCACTTGGGGGCTAATGCACATTGCTTGAGTCTTCCTACTATTTTA
TTGTGACCCGGTTGTGCTGTAAACGATCACAGCCAGCTCATGGGGGCTACACAGATAAGCTTTCACTTTTAAACAATGGT
AAATAGGACCGACTCATTCATGCTGATTAAACCAGCCCTTGGGGACTACGGATGCAATGCTAAATTATTTGAACATCCGG
TTTAATTCTAACCGGC--------CCTTGGAAGGATTCTACTACAGATGCTTATGGAT
>chr4A_1760
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------------------------------------------------------------------------------GT
AAACAACTTTGAGCTTCAAAAGCATATATTGGTTAAGATTGCTGCTCCTGGGACCTGAGTAAATTGCAGATTGGTTAGCG
TCGGTTTATACAATCAAGAAAAA-GATTCACTTGGGATGGACAGCAAGGCGACTCGCCAAAGATAGCAGAAACCATCTTA
GATACACGGTGTTTTAAGCCGGTGAGCTCAGCGGTCACCTCTTGAAGAGCCGCCTCTGCTTTCTCAGCTCGCTGCGTCAA
AGTAGTCTTTTCTTCAGCCTAAGTTTTTCTCTCTGCATCAAAGCTGGTCTTCAG-TTTTTCCGTTTCAGATATGCTGAAT
TGGAATTTTGACTCAGCCTTCCGGGTCTCAGATTCCTGATTCACCAGCCGAGTCTCTACATCAGTCAATTGTGATTCAAG
CTC-AGCAGTAGCAGCCTGTATGAAACACAGAGTTGTCAACATGTTCATATCAAGGTTACAGGAATATAAGTCCCAAGTC
TTTTGCAAGCAACAACACTTGGAACTTGGGGACTAATGCCTGCCAAAACA-TTTAT-TCATACAAAATGGCTCATGTGAA
TAAGTCCCAAGCACTTTGCAAGCAAGAATACTTAGCACTTGGGGGCAAATGCATATCGCTGGTATCTTCCTACTATTTTA
TGATAACCCGGTTGTGCTGTAAACAATCATAGCCGGCTCATGGGGGCTACACATATAAGCTTTCATTTTTAAACAATGGT
AAATAGGACCGGCTAATTCATGCTGATTAAACCGGCCCTTGGGGACTACGGATGCAATGCTCAATTGTTTAAACATCCGG
TTTAATTCTAACTATGACAACCGGACTTGGAAGGATTCTACTATAGATGCTTATGGAT
>chr2A_1761
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-------------------------------------------------------------------------------T
AAACGGCTATGAGCTTCAAAAGCATATCTTGGTTAAGATTGCTGCTCCTTGGACCTGAGTAAATTGCAGATTGGTTATCG
GCGGTTTATACAATCAAGAAAAA-GATTCACTTGGGATGGACAGTGAGGCGACTCACCAAAGATAGCAGAAACCATCTGA
GATACACGGTGTTTTAAGCCGGTGAGCTTAGTGGTCACCTCTTGAAGAGCCGCCTCTGCTTTTTCAGCTCGTTGCGTCAA
AGCAATTTTTTCTTTAGCCCATGTTTTTCTCTATGCATCAAAGCTGGCTTTCAG-TTTTTCCGTCTCAGATATGCTGAAC
TGGAATTTTGACTCACCCTTCTGGGTCTCAGATTCCTGATTCACCAGCCGGGTGTTTGCATCAGTTAATTGTCATTCAAG
TTT-AGCAGTAGCAGCCTATGTGAAACACAGAATTGTCAGCATGTTCGTATTAGGGTTACACG---GTAAGTCCCAAGTC
TTTTGCAAGCAAAAACACTTGGCACTTGGAGGCTAATGCCTGCTGAAAAA-ATTAT-TCATACAAAACGATTCATGTGAA
TAAGTCCCAAGCACTTTGCAAGCAAGACTACTTGGCACTTGGGGGCTAATGCATATCGCTTGTGTCTTCCTACTATTTTA
AGATGACTCGGTTGTGCTGTAAACAATCACAACTGGCTCATGGGGGCTACACAGATAAGCTTTCATTTTTACACAATGGT
GAATAGGACCGGCTCATTCATGCTGATTAAACCGGCCCTTGGGGACTACAGATGGAATGGTAAATTGTTTAAACATCCGG
TTTAATTCTAACTATGACAACCGGCATAGGAAGGATTCTACTACGGATGCTTATAGAT
>chr2A_1761
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-------------------------------------------------------------------------------T
AAACTGCCATGAGCTTCAAAATCATATCTTGGTTAAGATTGCTGCTCCTTGGACCTGAGTAAATTGCAGATTGGTTATCG
GCGGTTTATACAATCAAGAAAAA-GATTCACTTGGGATGGACAGTGAGGCGACTCACCAAAGATAGCAAAAGCCATCTGA
GATACACGGTGTTTTAAGCCGGTGAGCTTAGTGGTCACCTCTTGAAGAGGTGCCTCTGCTTTTTCAACTAGTTCCGTCAA
AGCAATTTTTTCTTTAGCCCATGTTTTTCTCTATGCATCAAAGCTGGATTTCAG-TTTTTCCGTCTCAGATATGCTGAAC
TCGAATTTTGACTCTCCCTTCTGGGTCTCAGATTCCTGATTCGCCAGCCCGGTGTTTGCATCAGTTAATTGTCATTCAAG
TTTTAGCAGTAGCAGCCTATGTGAAACGCAGAATTGTCAGCATGTTCGTATTAGGGTTACACG---ATAAGTCCCAAGTC
TTTTGCAAGCAAAAACACTTGGCACTTGGAGGCTAATGCATGCCGAAAAA-ATTAT-TCATACAAAACGATTCATGTGAA
TAAGTCCCAAGCACTTTGCAAGCAAGACTACTTGGCACTTGGGGGCTAAT-CATATCGCTTGTGTCTTCCTACTATTTTA
AGATGACTCGGTTGTGCTGTAAACAATCACAACCGGCTCATGGGGGCTACACAGATAAGCTTTCATTTTTACACAATGGT
AAATAGGACCGGCTCATTCATGCTGATTAAACCGGCCCTTGGGGACTACGGATGGAATGGTAAATTGTTTAAACATCCGG
TTTAATTCTAACTATGACAACCGGCATAGGAAGGATTCTACTACGGATGCTTATAGAT
>SNPs
-------------------------S-----------------S---S--------------------------------
-----------S-------------------------------SS--------------------------S--------
-----------------------------S----S-----S---------------------------------------
----------------------------------------------S---------------------------------
-------------S--------------------------S---------------------------------------
S--------------S--------------------------------S-------------------------------
-S-----S------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----S---------------------------------------------------------------------------
---------------S---------S------------------------------------------------SS----
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
------------------------------------------------------------S------S------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-S------------------S----------------------------S-----S------------------------
----------------------------S------------------------S--------------------------
-S-------------------S----------------------------------------------------------
------------------------------S--------------------------S---------------------S
--------------S-SSS-------------------------------------------------------------
-------------------------------------------S-------------------------------SS---
------------------------------------------------------S-------------------------
-------------S-----------------------------S------------------------------------
--------------------------S--S----------------------------------------S---------
---------------------------------------S------------------S---------------------
S----------SSS---------------------------S-----------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------S------------------------S----S-----S-----
----------------------------------------------------------S----------S----------
--------------------------------------------------------------------------------
---S--S----------------S----------S---------------------------------------------
-------------------------S--------------------------------
>forward_44
------------------------CGCTTGCAATGGTAGCCATC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_1964
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------TCGAGGCGACTCACCAAAGA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
