>input_sequence_74082
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---------------------------------------ATGGCCACCACCACGAGCTACGACAACGCCGACGTCCGGCA
CAGGGCCCTAGGCGTGCACGCCGCGTCCCGCAAGATCGGCAAGCCGGCGCCGT---CGTCTTCGCAGGCGCAGCAGCAGA
ACCGGAAGCCCGTCAT--------CATCTACATGGTGTCCCCCAAGGTGATCCACGTGGAGGCCCACGAGTTCATGTCGC
TCGTGCAGCGGCTCACCGGCCCTGAGGTCGCCGGGGAGGACGGGCGGGAGAGGGCGTCGACCTCGTCTTCTTCCCCGAGG
ACCGCGACGGACAGGGCCGGGAGGGCGGCCCAGCCTGTGCGCGTCAAGGCCCGCGCCCTCAACCGGCCCGGCCCCGCGGT
GTCCGTCTCGGTGACGGCCACGAGA------CAGCAGCAGCAGAACGTGCCGCCGTCGTGGGCGGGGCCGTCGCCGTCGC
CAACGACGGGGTTCCTGTTCCACGACCTCAGCCCGCTCCGCGGCGGGGCGCTCAAGGGCGAGGCGCCCATGGTCTCCCCG
TGGCTGCACCAGACCAGCGACCATTTCTTGAGCCCCGGCGGCGCGTCGGCTCTCTGCTCGCCGTCCGGCTTCCTCGACAT
CTTCGGGCCGCTCTCATCTCAGCAGCAATGA-------------------------------------------------
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>chr7B_1_TraesCS7B01G277500
TAGTCAAGAGCCACAAACGGATATTCAAGCATCACCCCATCCATGCATGCACATGCACATCATGTTCACAACATTTGAAA
GGATCTTGTCATCACCTTGCTGCAAGGCATCCATATCTTCTCGCTTCTGAATATTTGTCCAACATAGTAGATACAAACAT
GCAAAGAGCATAATCTCAAAGGCACTTTTGATAAGGATTTCGTCAAAA-GGCTACTTTGTTGTGCACATTCTAGATT---
------------GAGAGAACAACAACGTACAAGATTTCACCCTTAAGGG-AAAA---AACATATGTAGCAATGTGTTGAC
GCTTAAGCGCCTCCTTAAGCGTTGCCTTTTCCAACAGATG----------------------------------------
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-----------GTGTGAGTAGATTTTTTCCCATTCATTTACTTCTGTCTTGAAGCTGAGATGGGAGAAAAATGTCCTCTA
GTCCTT-CATCCATTCATGTGAATCAAAGGGGAGACCACACTCTGGAGTAAAATTTGAAGAACAACATGACACATGTGAT
AAGCAATTCAAACTATTCAAAATAGTAAAATTTGGAGAAGAATGAAATATTGACCCGAACAATAGGCAACGGGTGGTGGC
TACCAAACATCATATTTCTCAGTAAATAAAGCCGGGGTATT--GCACTTCAAATGGGATTGTTCTAGCAGTAAAAAAGAG
AGAG-AGAGATGATGCATGTGTCGACGATAGAGTCATAGAGCACAACTAGGGCTGCGGAGAGAGGCGACCACACAGGATG
GAACACGAGGCACGTGCCACGCCGCACCACTCTTGTCTCATTCGATTTTATAGCCTTTAAACGCCAGGAGGCGAGGACGC
TGTCCATGGCTATATAAGCCATTCTGCGCCCACGGATGATAGAAGATCGGTACGTTTAACCTCTTGCTGTCCCCCTCAGA
TCATCCGCGTCTGCCTGCCTGCCTGCCTCAAAGTCGCACCTATCCATTACCCCCGGCCGGTA----GCTATCCGTCCGTC
GTCGTCGCCGGCCCGTGCGCGCCCTTCTGTTCTACCCCCATGGCCACCACCACGAGCTACGACAACGCCGACGTCCGGCA
CAGGGCCCTAGGCGTGCACGCCGCGTCCCGCAAGATCGGCAAGCCGGCGCCGT---CGTCTTCGCAGGCGCAGCAGCAGA
ACCGGAAGCCCGTCAT--------CATCTACATGGTGTCCCCCAAGGTGATCCACGTGGAGGCCCACGAGTTCATGTCGC
TCGTGCAGCGGCTCACCGGCCCTGAGGTCGCCGGGGAGGACGGGCGGGAGAGGGCGTCGACCTCGTCTTCTTCCCCGAGG
ACCGCGACGGACAGGGCCGGGAGGGCGGCCCAGCCTGTGCGCGTCAAGGCCCGCGCCCTCAACCGGCCCGGCCCCGCGGT
GTCCGTCTCGGTGACGGCCACGAGA------CAGCAGCAGCAGAACGTGCCGCCGTCGTGGGCGGGGCCGTCGCCGTCGC
CAACGACGGGGTTCCTGTTCCACGACCTCAGCCCGCTCCGCGGCGGGGCGCTCAAGGGCGAGGCGCCCATGGTCTCCCCG
TGGCTGCACCAGACCAGCGACCATTTCTTGAGCCCCGGCGGCGCGTCGGCTCTCTGCTCGCCGTCCGGCTTCCTCGACAT
CTTCGGGCCGCTCTCATCTCAGCAGCAATGATCGGGTCAACCCTCAGCCGACGGCGACATGGTCAGAAGTCTTTACCAAC
TCAATA---TGCATTAGGGTTTCTGCATGATGAACACGCATGCTCGCTCGCTCGCCTCA--CACACGAGATGATCAAATT
GGCCCGGTGTTGTCTAGGCTGGTTCGGCAAGCTGTAAATTAATAGTAGTCTAGGTTCCTGCAGTATTG-ATTTTATGTGT
TTGATTTTGATTTTTTTTACCTTCTTTGCATGCAGTTCTTGCTGTACATTAATTGTAATAACCGGTGCACCCATGAGACA
TGAAATTGATTTGTTTGTTGATTCGTTTTAGCTGGTGCTGCAAGCTGTGATTGACAGGAGCAGCTGGTTAACTAATGCAT
TAGGCGCTTGAATTGACAGAAACATATATGCAGAAATGCAAGATATATATCCTGGCGCTTGACTG---ACTAGCTAGCTG
GACTGCACATATGTGGTTCCACCTTCCCCGTCGTGTACATGCGAACCACTTCTG----CTAGAAGAAATTAAGCGTGT-C
GTATTTAATCCACCAGCGATACGGTGATCTACAGCTTGATCACCGTG---------------------TATGTGTATTTT
TCTTATAGTTGGCATGCAGTGATTTA--CGCGGCATTAGTCTTTCTGTTCAGGCCTGAA-CCTGAG------GGGGAT--
--TATACATTAAGACGAGCTACGTATTGCATAAATGCACTTTTTTTTCCTTTAAGAGCGTGAAAATCAAACTTGGTGATA
CTGTTCACGATCTTAGCT----CTTCTGC---------------------------------------------------
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---------------------------------------------------------------------TAACCACTCAA
GGGATCACAAAAACCTGTAGGTCAAGCCCATGCAGGGTTGCACAGAGATCAAAGGCAGTGCATATATATACGAATTACTT
TTGCTGACAACACCGGTAATTGATCGGTGTGTCTTTTCCAAAGAAGAAGTAACGTAGTACTAACATTGTAGTTGACAAAA
AAAAACATTGTAGTTGACACCGTGCTTCTCGGTTTTAATAGAGTGACACAGTAATAATAGACACTAAAGGGCATTTGGTC
TAG
>chr7A_2
AGTCG-AGCGCCACAAACCGATATCCAAGTATCACCCCATCCATGCATGCACATGCACATCATGGTCACACCATTTGGAA
GGATCATTTCATCACCTTGCGGCAAGGCGTCCATATCTTCTCGCTTCCGAATATCTGTCCAACATAGTAGATACGAACAT
GCAAAGGACACAATCTCAAAGGCAGGTTTGATCAGGATTTTGTCAAAAT-GCTACTTTGTTGTGCACATTCTAGATTTCC
TAGCAAACTGCT-AGAGAACAACAACATACTAGATTTCACACTTACAGG-AAAAACACATATATGTAGCACCAAATATAG
AATTGCCAGACCAAGTTAGTACACATATGAATATAAAAAACAAACCCAGAAGAAACAAGGAACATATAGGATTCCCATGC
CAGCACCTTTTCCTAATAACGTCCCTAGTAAAAATATCACCCTCGAATAGTTGCCAAAGGAAGATTTGGATTTTAAGAGG
AAGGAAGGGGGTCTTAGCTTCCGAGATCCAATTATAGTTTGTCCCGGCAAGGTCATTCTCCAGCAATTGGTACATGGTCT
TACTATAAAAGTTAAATTTGTATCATCATGATTATTATATCAAGGAAGAACATTGATTGGTACACAAGTCCTTCCATTGC
TAACTGAATCGAGACATGAGACAAGCTTCTCCTGAAAGAAAGACAAGGGACATAGTAGATGATTGATAAACAGCGCGCTC
TTGCACATCGAACGTTCCAAATAACTGAGAATGTTGCTCACAACAAGTACAAGGTACATTATCACGCATGATATATTTCG
AGAGTCTAGCAATTTTTCCGTTGTTCAATGCCACCCTCCATCCAACCGTACAAATCTCCGACTTCATGATGGCTATCCAA
TCGGGGGAATTGGATAATATAAATTTAACAAATGCAACAATATTATTATGGTAGTAATACACAACATTCACTATACCTTG
CAACAAGCCATTCTGCTTCTCAAGCTCCCACCACCACTTAATTAAGAGACTGGTATTTTGTTTCCTTTAGTGCTGGACAC
CCAAATCCCCTTTTTTTTAGGAACTCCTCTGATTCATAGGATAGGGAAATGGAGAATTTTATATATTTTTTGTAAAAATA
AGATAGGAATACATGTGTAGAATAGAGGATTGGAAAAAGAACCCTACAAGGTTGGACGCCTAATTTGTAGAAAAAAAAAT
ATACGTCATGAATTGTGAAGACGTCCATATTGTGGAGAAATTAAAACTTCCTTCTTGGCACAACTATTTGCTTGATCCAA
AAATAAATCCCTCTGTCCCATAATGTAAGACATTTTTTAACACTAGTGTAGTGTCAAAAAAGGTCTTATATTAGGGACGG
AGGGAGTATTTGCTTGATCTAGAGCTAATGAGGTCCCAACATGGTATGTCTCTTTTCCTTGTGCGCATGAATTTTGGAAC
GAGGTGTGACCGTGTGAGTCGACTTTTT--CATTCATTTACTTCTGTCTTGAAGCTGAGATGGGAGAAAAGTATCCTCTA
GTCCTTCCATCCATTCATGTGAATCAAAGGGGTGACAACACCGTAGAGTAAAAATTGAAGAATG----------------
---------------------------------------------AAAATTGACTTGAACAAAAGGCAACGTGTAA---C
TACCAAACATCATATTTCTCTGTAAATAAAGCTGGGGTATT--GCACTTCAAATGGGATTGTTCGAGCAGTAAAAAA---
--AG-AGAGATGATGCATGTGTCGACGACG-----ATAGAGCACAACTAGGGCTGCGGAGAGAGGCGACCACACAGGATG
GAACACGAGGCACGTGCCACGCCGCACCACTCTTGTCTCATTCGATTTTCGCCTTTA-AAACGCCCGGAGGCGAGGACGC
TGTCCATGGCTATATAAGCCACTCCGCGCCCACGGATGATAGAAGATCGGTACGTTTAACCTCTTGCTGTCCCCCTCAGA
TCGTCCGCGTCCGCCTGCCTGCCC----CAAAGTCGCACCTATCCATTGCCCCCGGCCGGTA----GCTATCTGTCCGTC
GTCGTCGCCGGCCCGTGCGCGCCCTTCTGTT--------ATGGCCACCACGACGAGCTACGACAACGCCGACGTCCGGCA
CAGGGCCCTCGGCGTGCACGGCGCGTCGCGCAAGATCGGCAAGCCGGCGCCGGCGCCGTCGTCGCAGGCGCAGCAGCAGA
ACCGGAAGCCGGTCAT--------CATCTACATGGTGTCCCCCAAGGTGATCCACGTGGAGGCCCACGAGTTCATGTCGC
TCGTGCAGCGGCTCACCGGCCCGGAGGTCGCCGGGGAGGACGGGCGGGAGAGGGCGTCCACGTCGTCGTCCTCCCCGAGG
ACCGCGGCGGACAGGGCCGGGAGGGCGGCGCAGCCGGTGCGCGTCAAGGCCCGCGCCCTCAACCGGCCCGGCCCCGCGGT
GTCCGTCTCGGTGACGGCCACGAGGCAGCAGCAGCAGCAGCAGAACGTGCCGCCGTCGTGGGCGGGGCCGTCGCCGTCGC
CGACGACGGGGTTCCTGTTCCACGACCTCAGCCCGCTCCGCGGCGGGGCGCTCAAGGGCGAGGCGCCCATGGTCTCCCCG
TGGCTGCACCAGACCAGCGACCATTTCTTGAGCCCCGGCGGCGCGTCGGCGCTCGGCTCGCCGTCCGGCTTCCTCGACAT
CTTCGGGCCGCTCTCGTCCCAGCAGCAATGATCGGGTCAACCCTCAGCCGACGGCGACATGGTCAGAAGTC-TTACCAAC
TCAATACTGTGCATTAGGGTTTCTGCATGATGAACACGCATGCTCGCTCGCTCGATCGCCTCACACGAGATGATCAAATT
GGCCCGGTGTTGTCTAGGCTGGTTCGGCAAGCTGTAAATTAAA--TAGTCTAGGTTCTTGCAGGATTTCATTTTATGTGT
TTGATTTTGATTTTGCTTACCCGCTTGTT-TGCAGTTCTTGCTGTACATTAATTGTAATAACC---------ATGAGATA
TGAAATTGATTTATTTGTTGATTCGTTTTAGTTGGTGCTGCAAGTTGTATATAATTGA--------------TAATGCAT
TAGGCGCTTGAATTGAGAGAAACATATATGCAGAAATGCA----ATATATCCTGGTGCTTGACTT---ACTAGCTAGCTG
GACTCCACTCCATTCTCA------------TCGTGTACATGCGAACCACTTCTAGCTACTCCAAGAAATTAAGAATGT-C
GTATTTAATCCACCGGATATACGGTGATCTACAGCTTGATCACCGCATACTCCAAGAAATTAAGTATATATTTCTACTCT
TCTTATAGTTGGCCTGCAATGGTTTA----CGGCATTAGTCTTTCTGTTGAGGCCTTGGACCTGAGCCATGAGGGGGT--
--TATACACTAAGAAGGACTACATATTGCATAAATGCAGTTTTCTAA-------------GAAAATTAGAATTGATGATA
TTGCTCACGATCTTAGGTATGCCTTCTGC---------------------------------------------------
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---------------------------------------------------------------------TAATTACTCAA
GGGATCACAAA---------------------------------------------------------------------
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>chr7D_59
----------------------------------------------------------ATCATGTTCACAACATTTGAAA
GGATCATGTCATCACCTTGCTGCAAGGCATCCATATCTTCTCGCTTCCCAATATTTGTCCAACATAGTAGATACAAACAT
GCAAAGAGCATAATCTCAAATGCACTTTTGATCAGGATTTCGTCAAAAAGGCTACTTTGTTGTGCACATTCTAGATTTCC
TACCAAACTGCTGAGAGAACAAAAACATACAAGATTTCACCCTTAAGGAAAAAA---CACATATGTAGCAACTTGGTGAC
GCTTAAGCACCTCCTTAAGCGTTGCCTTTTCCAACAGATG----------------------------------------
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-----------GTGTGAGTAGATTT-------------------TGTCTTGAAGCTGAGATGGGAGAAAAATATCCTCTA
GTCCTT-CATCCATCCATGTGAATCAAAGGGA-GACCACACCGTGGAGTAAAATTTGAAGAACAACATGACACATGTGGT
AAGCAATCCAAACTATTCAAAAGAGTAAAATTTGAAGAAGAATGAAAAATTGACCTGAACAATAGGCAACGTGTGGTGGC
TACCAAACATCATATTTGTCAGTAAATAAAACCGGGGTATCTCGCACTTCAAATGGGATTGTTCGAGCAGTAAAAAA---
--AAAAGAGATGATGCATGTGTCGACGA--------TAGAGCACAACTAGGGCTGCGGAGAGAGGCGACCACACAGGATG
GAACACGAGGCACGTGCCACGCCGCACCACTCTTGTCTCATTCGATTTTGGCCTTTA-AAACGCCCGGAGGCGAGGACGC
TGTCCATGGCTATATAAGCCATTCTGCCCCCACGGATGATAGAAGATCTGTACGTTTAACCTCTTGCTGTCCCCCTCAAA
TCATCCGCGTCTGCCTGCCTGCCTGCCGCAAAGTCGCACCTATCCATTACCCCCCGCCGGTACGTAGCTGTCCGTCCGTC
GTCGTCGCCGGCCCGTGCGCGCTCGTCTGTTCCACCCCCATGGCCACCACCACGAGCTACGACAACGCCGACGTCCGGCA
CAGGGCCCTCGGCGTGCACGGCGCGTCGCGAAAGATCAGCAAGCCGA------CGCCGTCGTCGCAGGCGCAGCAGCAGA
ACCGGAAGCCGGTCATCATCTAGACATCTACATGGTGTCCCCCAAGGTGATCCACGTGGAGGCCCACGAGTTCATGTCGC
TCGTGCAGCGGCTCACCGGCCCGGAGGTCGCCGGGGAGGACGGGCGGGAGAGGGCGTCGACGTCGTCGTCCTCCCCCAGG
ATCGCGGGGGACAGGGCTGGGAGGGCGGCGCAGCCGGTGCGCGTCAAGGCCCGCGCCCTGAACCGGCCCGGCCCCGCGGT
GTCCGTCTCGGTGACGGCCACGAG---GCAGCAGCAGCAGCAGAACGTGCCGCCATCGTGGGCGGGGCCGTCGCCGTCGC
CGACGACGGGGTTCCTGTTCCACGACCTCAGCCCGCTCCGCGGCGGGGCGCTCAAGGGCGAGGCGCCCATGGTCTCCCCG
TGGCTGCACCAGACCAGCGACCATTTCTTGAGCCCCGGCGGCGCGTCGGCGCTCGGCTCGCCGTCCGGCTTCCTCGACAT
CTTCGGGCCGCTCTCGTCTCAGCAGCAATGATCGGGTCAACCCTCAACCGATGGCGACATGGTCAGAAGTC-TTACCAAC
TCAATACTGCGCATTAGGGTTTCTGCATGATGAACACGCATGCTCGCTCGCTCGCCTCA--CACACGAGATGATCAAATT
GGCCCGGTGTTGTCTAGGCTGGTTTGGCAAGCTGTAAATTAT---TAGTCTAGGTTCCTGCAGTATTG-ATTTTATGTGT
TTGATTTTGATTTTTTTTAC---CTTGTT-TGCAGTTCTTGCTGTACATTAATTGTAATAACCGGTGCACCCATGAGATA
TGAAATTGATTTGTTTGTTGATTCGCTTTAGCTGGTGCTGCAAGCTGTGATTGACAAGAGCAGCTGGTTAACTAATGCAT
TAGGCGTTTGAATTGACAGAAAGATATATGCAGAAATGCA----AGATATCCTGGTGCTTGACTGATCACTAGCTAGCTG
GACTGCACATATGTGGTTCCATCTTCCCCGTCGTGTACATGCGAGCCACTTCTG----CTCGAAGAAATTAAAGCGTGCC
GTATTTAATCCACCGGAGATACGGTGATCTATAGCTTGATCGCTGTG---------------------TATGTCTATTTT
TCTTATAGTTGGCATGCAGTGATTTACGCGCGGCATTAGTCTTTCTGTTGAGGCCTGAACCCTGAG------GGGGATTA
TATATACATTAAGATGAGCTACGTATTGCATAAATGCACTTTTTTTCCTTTAAAGAGCGTGAAAATCAAACTTGGTGATG
CTCTTCACGATCTTAGCTCTTTTTTTAGAAGAAAAGGGCTCGAACGCCCCGGTTCCATTGCATGCAACGAAACCACCGAA
CATGTTTTGTTTTGGAGCTACAAGGCGCGCGGGAAAAAAACAGCAGAAACGCTGCCTCAGCAAAATGAAAACAGCACACA
GTCTACGCTCCCTTAAGGAGCAAAAGAGACAAAGAGCGGAAAGACCACGATCTTAGCTCTTCTGCTAATTAATCACTCAA
GGGATCACAAAAACCTGTAGGTCAAGCCCATGCAGGGTTGCACAAAGATCAAAGGCATTGCACACATATACGAACTGCTT
TTGCTGACAACACCGGTAATTAATCGATGTGTCTTTTCCAAAGAAGAAGTAAT---GTACTAACATTGTAC---------
---------GTAGTTGACACCGTGCTTCTCTCTTCTAATAAGGTTACACAGTAAAAATAGACACCATAGGGCATTTGGTC
TAG
>SNPs
SSSSSS--S---------S-----S----S--------------------------------------------------
-----S-----------------------------------------S--------------------------------
--------------------------------S-----------------------------------------------
--------------------------S------------------------------S-------------SS-------
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----------------------------SS------------------------------------------S-------
--------------------------------S--------SS-----------------------------------S-
-------S--------------S-----------S------------S-------S---------------S--------
----------------------------------------------------------------S------------SSS
SS--------------------------SSSSSSS---------------------------------------------
-------------------------------------------------SSSSSS-SS-------S--------------
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---------------------------S----------------------------------------------------
--------------------------------S-----------------------------------------------
---------S----------S------S------------------------S-------S-------------------
----------S---------------------------------------------------------------------
----------------------S--------------------------------------S-----S--S---------
------S----------------------S-----S--------------------------------------------
------------------------S-------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------S---S-------------------------
---------------S-------------------------------------------------------S--------
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------------------------------------------SSS-----------------------------------
---------------------SS---SSSS------------------------------------------------S-
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----------------------------------------SSSS-----------S------------------------
---------------------S--------------------------------------S------------SS-----
--------------S-S--------------------------------------------------------S------
-------------------------------------------------S------------------------------
--------------S-------------------------------S-S--S----------------------------
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------------------------------------------------------------------------S-------
--------------------------------------------S------------S----S-S---------S-S---
---------------------S----S-------------------------SSSS--------------SSSSSSSSSS
SSSSSSSSS---------------------SS--S-----SS--S---------S---------S-S-------------
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>forward_1672
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----------------------------------------------------ACCCGAACAATAGGCAACGG--------
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>reverse_3222
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---------------------CCTTCCCCGTCGTGTACATG---------------------------------------
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