>input_sequence_74081
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-------------------------------------------ATGGCGAGCTGCTTCTGCGGCACGAGCGCGGGGCGGC
GGGGCCAGTTCGTGAAGCTGGTGTTCCCCGGCGGGCACGTGGAGCTGCTGGACCGGCCGGTGCTGGCGGCGGAGGTGATG
TCACAGCACCCGCGGTTCTGCGTGGCGCGTCCCGACGTGTTCCGCGAGCCCGTCGGCGCGGTGGCCGCGCCCAACACCAT
GCTCCACCTCGGGCACAAGTACTACGTCGTGCCCAAGAGCACCGTCCGGAGGCTGCTCAAGTACTCGTCGTCCTC-----
-CTCCCACAGCGCCGGCGGCGGGCGCGGCAGCGTGTCGCTGAGGCGGCACCTGGCCAGGCCCGACGGCCATGACAGGGGC
CACAAGGACGGCGGCAAGAAGTGGTTCGGCTGGGCGGTGGGCGGCGAAGCCAGGGCGCCCCAGAGGCCTCCTCAGGAGGT
GGGCGTCAGTCATGGCAGTGAAGAAGAAGCGGTCAGGGGGGTACGTGTTAAAGATACAAAGGAGAAGGGGAGGGGTGCGA
AAGGCGAATCGCCGGGACGGCGGCGGCGGCGGCCGGTTGCCTCGCCGGCTGACTCGGCGTCCTATTCCTGGCAGCCTAGC
CTTCACAGCATAACTGAAGAATAG--------------------------------------------------------
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>chr7B_1_TraesCS7B01G265600
AAACACAACACAAATCTCAGATCAAAAATCAACGGCCAAGAAATCAACTGACTCAAATTCAAAATTCAAACGGACTTAGT
AAAGTGAGAAAGTAGAGCCTAATGGGCTTTCCTCGAACATATTGGAACTCTTGTTCCCTCTTAATTTATTGGCTAGCGCC
TGTCCCTTTTTATGCAGAATGACACGTACTAACTCTGCAGTGTAGGTAACACATGTTGTCATCTCAGTTGCTTAGGAGTA
CCAAGTATGTGGATTTACTCTTTCGCGATCGGCCGCTCCAGCGCTCGATTCGAACCAGCGCACAAGGCAAAACCGACAGG
ATTTCCAGGTAGGGCCCACCACGTGTGACAACCAGCCAACAAGGAATGGTGTGGTGCGCATCCACACGAAGGCACCATCG
TGAAGGCCCACCCAGAATCAACACTAATCCCCCCCCCTCCCGATTTTCGGGGGGTCCACCTTAATTAATCCCCTAATCTT
CAAAGAAAACAACTGTCTACTTTCCAAATCGGGAGCTGTCCGAAACCGAGCGCTCCAACGAGCGCGCGCGAGTTAGACTC
TCCCGTATGGTATGTATCCCTTCTCACTAGTGACATGCACTAACTCCACAGTTTTGGTACATATTGTCATCTCCGTATGG
CCGCCTATCGGAGGCCAAAGATGCCAGGCCACTACATGCATGCGGTCTTCCGCCAAATTTTCTAGACCTTTTTTTTTTTG
AGGGGAAAATTTTCTAGACCTTGTAACCTCAAAACCTCCTCGTAACCATCGTGACCTATGTGCAGCTAGCTTTTGACGCT
ATCCAAGATGCAGTGCCAACCTGCCAGGAACAACATAAAGGCACAAATGGCAACAACGATGGCATCTTGACGCTTTGCAC
GATCCACCAACACGCAATCCTAGGGCAGCTAGCTAAGTCAAAT---AGAAACCTAGCCACCTACTACCACATCTATAAAA
CCGCCGGCTGCTTGGAGTGAGCCGATCGATCGAGCTCAGGGCCATGGCGAGCTGCTTCTGCGGCACGAGCGCGGGGCGGC
GGGGCCAGTTCGTGAAGCTGGTGTTCCCCGGCGGGCACGTGGAGCTGCTGGACCGGCCGGTGCTGGCGGCGGAGGTGATG
TCACAGCACCCGCGGTTCTGCGTGGCGCGTCCCGACGTGTTCCGCGAGCCCGTCGGCGCGGTGGCCGCGCCCAACACCAT
GCTCCACCTCGGGCACAAGTACTACGTCGTGCCCAAGAGCACCGTCCGGAGGCTGCTCAAGTACTCGTCGTCCTC-----
-CTCCCACAGCGCCGGCGGCGGGCGCGGCAGCGTGTCGCTGAGGCGGCACCTGGCCAGGCCCGACGGCCATGACAGGGGC
CACAAGGACGGCGGCAAGAAGTGGTTCGGCTGGGCGGTGGGCGGCGAAGCCAGGGCGCCCCAGAGGCCTCCTCAGGAGGT
GGGCGTCAGTCATGGCAGTGAAGAAGAAGCGGTCAGGGGGGTACGTGTTAAAGATACAAAGGAGAAGGGGAGGGGTGCGA
AAGGCGAATCGCCGGGACGGCGGCGGCGGCGGCCGGTTGCCTCGCCGGCTGACTCGGCGTCCTATTCCTGGCAGCCTAGC
CTTCACAGCATAACTGAAGAATAGCCGTGTACTACTATGTGTGAGCCCACTTTATAAAGGAAAAAAAGTATGCAAGGAGA
ATGTGCAT------------------------------------------------------------------------
---------------------------GTCCTGTACATTAGAGAACGGTTGCTGAACTCTTTCTACGTACTACTTTGCTT
AAGAGGAATTTGCATTTAACCTGAGTAATTCATTCATTGCGACTTCAGTGCATTTTGCTTGTCAAATGGCAGGTGTATCG
ACCGGCGCCGCTGGTTCGCTAGAACAATGGCGATTTGTACGAGTAACATTTCTCCCCTCGCCGCCCCTCGGACAGTGACA
AAGGGCCGCAACGCATTTTTCACGTCTTTTTTTTAGAGTGGTTTTTCTACGCCCCACCACATTGCACACCCGCTAAACCC
TCAAGAAAACATAGCAAAACATTTTAAAAAATTCTGAAACTTTGTGTGAATGATTGTGAACAAAGGTTACATATGCTCGC
AAAGTTTGATGGTCAAATAACATTTGATTTGAGGAGCTCTGTACAGAAAAACAAACACTCAAAATTACTCAAAATGTTAT
ATGTGCTTCCAAAATTTTATAGGTGCTTGTCGTTTCTAATCAGTCCCACAAAATTTCAGAATTTGTCAAAAAATTTGCTA
TGTTTTCTTCAGAGGGTGTAGCTGGGGTGTAGTGTGGTGGGGTGCAACCACTACTTTTCCAAATTATTACTCTGGAAACG
AGGGAATCCTCTAGCTTATGCATCGATTGATGCATGTGCCGCCTTTTATTGTGGAGTTTTCAGTTCAGGACATAGTCATG
CACTCATAACAAACAAATATTGAAAGAAAGAGAAACAAATACAAAAGGCATGACAAAAAATGTCATGTCGAAGCGATCAA
CGCCAACAATGCAGTAACCACTGCTGCCGCCGCCCTTGGCAACAGATGGAGATCACTTGAATGTGAGTCCGGACCCTCTA
AGCTTATCCTCAATGATGGTATCAAAGCGTTGCGCCATCTCTGACGTCATATTGTTCACCCAATCTTCGGCCACCCCTTT
TCT
>chr7D_1
AAACACAACACAAATCTCAGAGCAAAAATCAACGGCCAAGAAATCAACTGACCCAAATTCGAAATTCAAAC-GACTCAGT
AAAGTGAGAAAGTAGAGCCTAATGGGCTTTCCACGAACATATTGGAACTCTTGTTCCCTCTTAATTTATTGGCTAGCGCC
TGTCCCTTTTTATCCAGAATGACACGCACTAACTCTGCAGTGTAGGTAACACATGTTGTCATCTCAGTTGTTTAGGAGTG
CCAAG---------------------------------------------------------------------------
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----------TATGTATCCCTTCTCAGTAGTGACATGAACTAACTCCACAGCTTTGGTACATATTGTCATCTCCGTATGG
CCGCCAATGGGAGGCCAAAGATGCCAGGCCACTACATGCATGCGGTCTTCCGCCAG------------------------
--------ATTTTCTAGACCTTGTAACCTCAAAACCTCCTCGTAACCATCGTGACCTATGCACAGCTAGCTTTTGACGCT
GTCCAAGATGCAGTGCCAACCTGCCAGGAACAACACAAAGGCGCAAATGGCAACAACGATGGCATCTTGGCGCTTTGCGC
GATCCACCAACACGCAATCCTAGGGCAGCTAGCTAAGTCCAATAGTAGAAACCTCAGCACCTACTC---CATCTATAAAT
CCGCCGGCCTCTTGGGGTGAGCCGATCGATCGAGCTCAGGGCCATGGCGAGCTGCTTCTGCGGCACGAGCGCGGGGCGGC
GGGGCCAGTTCGTGAAGCTGGTGTTCCCCGGCGGGCACGTGGAGCTGCTGGACCGGCCGGTGCTGGCGGCGGAGGTGATG
TCGCAGCACCCGCGGTTCTGCGTGGCGCGTCCCGACGTGTTCCGCGAGCCCGTCGGCGCGGTGGCCGCGCCCAACACCAT
GCTCCACCTCGGGCACAAGTACTACGTCGTGCCCAAGAGCACCGTCCGGAGGCTGCTCAAGTAC------TCCTC-----
-CTCCCACAGCGCCAGCGGCGGGCGCGGCAGCGTGTCGCTGAGGCGGCACCTGGCCAGGCCCGACGGCCATGACAGGGGC
CACAAGGACGGCGGCAAGAAGTGGTTCGGCTGGGCCGTGGGCGGCGAAGCCAGGGCGCCCCAGAGGCCTCCCCAGGAGGT
GGGCGTCAGTCATGGCAGTGAAGAAGAAGCGGCCACGATGGTACGTGTGAAAGACACCAAGGAGAAGGTGAGGGGTGCCA
AAGGGGAGTCGCCGGGACGGCGGCGGCGGCGGCCGGTTGCTTCGCCGGCTGACTCGGCGTCCTATTCCTGGCAGCCTAGC
CTTCACAGCATAACTGAAGAATAATCATGTACCG-TATGTGTGGGCCCACTTT--------------GTA----------
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>chr7A_571
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----------TATGTATCTCTTCTCACTAGTGACATGCACTAACTCCAGAGTTTCGGTACATGTTGTCATCTCCGTATGG
CCGCCAATGGGGAGCCAAAGAAGCCAGGCCACCACAT----GCGGTCTTCCGCCAC------------------------
--------ATTATCTAGACCTTGTAACCTCAAAACCTCCTCGTAACCATCGTGGCCTATGCACAGCTAGCTTTGGACGCT
GTCCAAGATGCAGTGCCAAAATGCCAGGAACAACACAAAGGCACAAATGGCAACAACGATGGCATCTTGGCGCCTTGCAC
GTCCCACCAACACGCAATCCTAGGGCAGCTAGCTAAGTCAAATAGTGGAAACCTCAGCGCCTGCCG---CAGCTATAAAT
CCGCCGGCCTCTTGGAGCGAGCCGATCGATCGAGCTCAGGGCCATGGCGAGCTGCTTCTGCGGCACGAGCGCGGGGCGGC
GGGGCCAGTTCGTGAAGCTGGTGTTCCCCGGCGGGCACGTGGAGCTGCTGGACCGGCCGGTGCTGGCGGCGGAGGTGATG
TCGCAGCACCCGCGGTTCTGCGTGGCGCGGCCCGACGTGTTCCGCGAGCCAGTCGGCGCGGTGGCCGCGCCCAACACCAT
GCTCCACCTTGGGCACAAGTACTACGTCGTGCCCAAGAGCACCGTCCGGAGGCTGCTCAAGTAC------TCCTCGTCCT
CCTCCCACAGCGCCGGCGGCGGGCGCGGCAGCGTGTCGCTGAGGAGGCACCTGGCTAGGCCCGACGGCTATGACAGGGCC
CACAAGGACGGCGGCAAGAAGTGGTTCGGCTGGGCCGTGGGCGGCGAAGCCAGGGCGCCCCAGATGCCTCCTCAGGAGGT
GGGCGTCAGTCATGGCAGTGAAGAAGAAGCGGGCAGGGTGGTACGTGTGAAAGACACCAAGGAGAAGGGGAGGGGTGCCA
AAGGGGAGTCGCCGGGACGGCGGCGGCGGCGGCCGGTTGCTTCGCCGGCTGATTCGGCGTCCTATTCCTGGCAGCCTAGC
CTTCACAGCATAACTGAAGAATAATCGTGTACCG-TATGTGTGGGCCCACTTT--------------GTATGCAAGGAGA
ATGTGCATAAGACAAGTGTATCCGTGTATGTCATTTGCCGGTGATTCTAATCATTTGATGCCGGAGTGAGTCTCCGAGTT
ATCTAGCCTGCAGCTGCAGGATTGGATGTCTTGTACATTAGAGAACGGTTGCTGAACTCTTTCTAC--------------
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>SNPs
---------------------S------------------------------S-------S----------S----S---
--------------------------------S-----------------------------------------------
-------------S------------S-------------------------------------------S--------S
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----------------------------------------------------------------------
-----S--S----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS----------------------------------------------------SS------------------
S----------------------------------S---------------------------------S----------
------------------------------------------------------SSS--------SSSS----------S
--------SS----------------------------------------------------------------------
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--S-----------------------------------------------------------------------------
----------------------------------------------------------------SSSSSS----------
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-----------------------------------S--------------------------------------------
--------------------------------S-----S---------S-----S--S--------------------S-
----S--S--------------------------------S---------------------------------------
-----------------------SS-------SSS--------S---------SSSSSSSSSSSSSS-------------
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------------------------------S-----------------------------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS
>forward_320
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------------------------------------------------------------CACAAGGCAAAACCGACAGG
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>reverse_2066
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-----------------------------------------------------------------ACACCCGCTAAACCC
TCAAG---------------------------------------------------------------------------
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