>input_sequence_74073
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--------------------------------------------------------------ATGGG---------CTGC
ATGGGCCGGTGCTGGGACAAATGCAAGTGGCCACTAGCGTGCTTCGCCGCCCTCGCCGCCGTCATCATCATCGTCGTCAT
GGTCGCCGCCTACAGCTTCGCCATCCAGCCATCCATCACCGTCGAGGACGCCTCGCTGGCCAGGTTCGCGCTGGCGACCA
CCCCGACGACGTCGCTCGGGTACAACCTCTCGCTGCGGCTCGTCGTCCGCAACCGGAACTGGGCGACGACCATGAAGAAC
ACGGAGCCGCTGGAGGCGGCGTACAAGTTCGACGGGCAGCAGTTCGACCGCGTGCAGGTCGCCGACAAGGGCGACAAGCA
CGGCCCCAGGAAGACGCGGGTGTACCGCCTCGTCACGGGCCAGGAGAGCGGCTACGTGTCGCTGGGCAACGCCGGCGTCG
CCGCGTACAAGGACCAGAACAAGACCGGGGAGTTCGAGCTGGAGGTGGCGGTCACCGGCGAGGTGCGGTACACGCTGCAG
CTGAAGAAGAACAAGCTGGCGGGGACCTGCAAGCTCAAGCTGAAGCTCGACTCGCCGGCGACGGCCGCCGTGGTGTTCGA
GAAGGTGAAATGCAAGCTCGAGAAGGAGAAGAAGGACAAGGAGTAG----------------------------------
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-----------------------------------
>chr6D_1_TraesCS6D01G106100
TGTTGTAAACATGGCATGAATACTTCATAAATTATAGATACGTTGGCGACGTATCAGCAGGCCACCGCCGGCAGGGCGGT
CGCG-TCGGACGCAGACCCCGACTGAGCAGGAGGCGCTGCTCGAGTCCTACCGCTCCGCCTGCGAGATTCGCCTCGCCAG
CTGGCGGTACCGGCAACGGGTGGCGGAGGTGGCGGCCGCCGGCAAGGAGTGCGACGACGAGGCGGGCGAGGCATTGTTCG
GCGAGACCAACGAG---GAG---------GA---CATCGCCGAGGCCGTGCCCCGGCGCCACGACCACGAAGAAGTCGGC
ACGTCCGCGGGTGCCGCCGGCAACGAGGAAGAGTAGTGCGCGGTAGGTCGCCGTCGCTCGTGTCCCAAGAAGGCCACCAT
-----T-CTCCCGTCGACGCCAAGCTTGGTGGGCTGAGCATCTTCGGCC-G-TTAGTTGCTTGGCGGCGATGTGGAGGCG
GACAA----ACTTCCCGGGCCTCCAGAGACGGATGTTACGGAG-------------------------------------
---GCATAGCTGG-AAAGG--CGAAGTTTCAGTTCTTTTGGTTCATGTCCGGACATGGGGAACAGCCGCCGACGACCATT
TAGACCTAG-CCAGACGAGCTCCGCTTAGTTGATGTAAATGTAATGAAATCCGTC--------------------AAGCT
CAAATGAAA-TCC-ATGATGTTTATATGAAATCCGGCCGTGTTTATATAAAATCCGGTCATGTTTAATTGAATTTCGTCC
GATTAGTTTGA---GTTGTCAAAATGTACGCGGCTAGTGTCGGATGTCATCTTCGTCGCATCCGTATCCGTGCACTGATC
TTCTGTGCACATACGGATGCAGGTGAAAATTTATGGGGTGCCATGCCCTAAGAACAAAGACCACGAC----TCGGTGTAC
GTTCCTCCCAGTCCATAAGTACCCCACTCAGACT-CACAGTTCAAATTACAAAGTCAATGCCAGCAAGCTCCAGCACCCT
CCGCCCTCCAGCACCCTCTCGGCCCTCCAACTCCAAGATCTGAATCAAGAAAACCGCCGGCGATGGG---------CTGC
ATGGGCCGGTGCTGGGACAAATGCAAGTGGCCACTAGCGTGCTTCGCCGCCCTCGCCGCCGTCATCATCATCGTCGTCAT
GGTCGCCGCCTACAGCTTCGCCATCCAGCCATCCATCACCGTCGAGGACGCCTCGCTGGCCAGGTTCGCGCTGGCGACCA
CCCCGACGACGTCGCTCGGGTACAACCTCTCGCTGCGGCTCGTCGTCCGCAACCGGAACTGGGCGACGACCATGAAGAAC
ACGGAGCCGCTGGAGGCGGCGTACAAGTTCGACGGGCAGCAGTTCGACCGCGTGCAGGTCGCCGACAAGGGCGACAAGCA
CGGCCCCAGGAAGACGCGGGTGTACCGCCTCGTCACGGGCCAGGAGAGCGGCTACGTGTCGCTGGGCAACGCCGGCGTCG
CCGCGTACAAGGACCAGAACAAGACCGGGGAGTTCGAGCTGGAGGTGGCGGTCACCGGCGAGGTGCGGTACACGCTGCAG
CTGAAGAAGAACAAGCTGGCGGGGACCTGCAAGCTCAAGCTGAAGCTCGACTCGCCGGCGACGGCCGCCGTGGTGTTCGA
GAAGGTGAAATGCAAGCTCGAGAAGGAGAAGAAGGACAAGGAGTAGTTAATTTGCTAGCTAC---TGTGTACTGTATGGT
TTTCATCCAAAGTTCCAAGCAATCTCTGGCGGCCGGTTGCCAACTTGCCATATCGAGTAGTTGTAGTACTTCTC-ATT-A
TTTGATTCCTTCCTTATCCTTATG--TA----AAAAGATTTTCGATGGTGAATCTTGGTTGCTAGTGTTTGAAATTTACA
TGTGCTATGTTTCCCCTTTTTTTGTGGCTACAAGATGTGAATAGCTAGATGGT---------------------------
--------------------------------------------------------------------------------
---------------------AGTCCCTCCATTAC--AAATTACGATGTCTTGGATATTTTAATGAGAACTACTATATAC
GCACTGAAATACTGAAATGAGTGAACAAACACATTAAAACATGTCTATATAAATTCGATTCAGGA-AAAAATTGTGTTTA
CAAACACTATAAGATGTTCTGCACATTTCAATATGAACTATACAG--ACTGAAATGAGT-AAACAAACACACTAAATCAT
GCCTATATACATTCGATTCTG--GAAAAAATTAGGACATCTTATTTTTGTGAACGGAGAAAGTAGCATTTAACCATATTT
TTTTGAAGATGGTATTATAAATGTTAATGTATTTTCTGGTATAATGGGTCAAATTCCACGAAGTTTGACATCGAATAAAT
GTAACATGCAAT-----------------------------------ACCCCTTATATTTTAGAGGAGTGAATATAGTAT
GCACG-------GTACTATCCCGCGTCGAATGGGAGAAAGCGTCGTCCCAGCTTGTC-----------------------
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------------------------------------AAGAGCTAGTACAGCCCTCTTGCCAGAAAAAAAAAATTAG----
----CTAGCACA-GCCATGCA-CTGTTCGTGTCAGACATGTTAGAACGAACGATTTTTTATTGTTCTAATT-TGGAACCG
AATGACTTCTTTCTTTATCACCAGCTCTCCCAGGCACACATGGGCACTCCGGTCCGTTTGGCTCGTGGCCAACC------
----CAACCGATTTAAAGGCGCGCAGGTTTCGCCGAAACTACAGCCCGCGTCTGTCCATACTGGCCCGCAGCCCGCGTCT
TCGCCCACAGTCGTTGTTTTTCATTTTTCCTGTGG
>chr6A_1
TGTTGTAAACATAGTATGGATACTTCATAAACTATAGATA-GTTGGAGACGTATCAGCAGGTCACCGCCGGCAGGGCGGT
CACG-CCGAACGCGGACCTCACG-GAGCAGGTGGCGCTGCTCGAGTCCTACCGCTCCGCTTGCGAGATCCGCCTCGCCAG
CTGGCGGTACTGGTAGCGGGTGGCATAGGTGGCGGCCGCCGGCAAGGAGTGCGACGACGAGGCGGGGGAGGCATTGTTCG
GCGAGATCAACGAG---GAG---------GA---CATCGCCGAGGCCGTGCCCCGGCGCCACGACCATGAAGAAGTCGGC
ATGTCCGCGGGTGCTGCCGGCAACGAGGAACAGTAGTGCACGGTAGGTCGCCGTCGCTCGTGTCCCAAGAAGGCCACCAT
-----T-CTCCCGTCGATGCCAAGCATGGTGGGCTGAGCATCTT--------------GCTTGGCGGCGATGTGCAGGCG
GACAGCTTCACTTCCCGGGCCTCCGAAGGCGGATGTTATGGAG-------------------------------------
---GCAGAGCTGGAAA-GG--CAAAGTTTCAGTTCTCTTGGTTCACGGCCGGACATGGGGATCAGGCGCCGACGACCATT
AAGACCTAG-CTGGACGAGCTCCGCTTAGTTGATGTAAATGTAATGAAATCCATT--------------------AATTT
TAAATGAAA-TCC-ATTATGTTTATATGAAATCCGGT---------------------CATGCTTAATCGAATTTCGTCC
GATTAGTGTGA---GTTGTCAAAATGTACGCGG---GCGTCGATTGTCATCTTC-TCGCATCCGTGTCCGTGCATTCATC
TCCTCTCCACAGACGGATGCAGGTGAAAATTTACGGGGTGCCATGCCCTAAGAACAAAGACTACAACTCGGTGTACTTTA
GTTCCTCCGAGTCCATAAGTACCCCACTCAGACT-CACAGTTCAAATTACGTAGTCAATGCCAGCAAGCTCCAACACCCT
CCGCCCTCCAGCACTCTCTCGGCCCTCCAACTCCAAGATCTGAATCAAGAAAACCGCCGGCGATGGG---------CTGC
TTGGGCCGGTGCTGGGACAAATGCAAGTGGCCACTAGCGTGCTTCACCGCCCTCGCCGCCGTCATCATCATCGTCGTCAT
GGTCGCCGCCTACAGCTTCGCCATCCAGCCATCCATCACCGTCGAGGACGCCTCGCTGGCCAGGTTCGCGCTGGCGACCA
CCCCGACGACGTCGCTCGGGTACAACCTCTCGCTGCGGCTCGTCGTCCGCAACCGCAACTGGGCGACGACCATGAAGAAC
ACGGAGCCGCTTGAGGCGGCGTACAAGTTCGACGGCCAGCAGTTCGACCGCGTGCAGGTCGCCGACAAGGGCGACAAGCA
CGGCCCCAGGAAGACCCGGGTGTACCGCCTCGTCACGGGCCAAGAGAGCGGCTACGTGGCGCTGGGCAACGCCGGCGTCG
CCGCGTACAAGGAGCAGAACAAGACGGGGGAGTTCGAGCTGGAGGTGGCGGTCACCGGCGAGGTGCGGTACACGCTGCAG
CTGAAGAAGAACAAGCTGGCGGGGACCTGCAAACTCAAGCTTAAGCTCGACTCGCCGGCGACGGCCTCCGTTGTGTTCGA
GAGGGTGAAATGCAAGCTCGAGAAGGAGAAGAAGGACAATGAGTAGTTAATTTGCTAGCTACTACTGTGTACTGTATGGT
TTTCATCCAAAGTTCCAAGCAATCTATGGCGGTCGAGTAGTT--------------GTAGTTGTAGTACCTCTCGTTT-A
TTTGATTCCTTCA------TTATG--TA----AAAAGATTTTCGTTCGTGAATCTTGGTTTCTAGCATTTGAAATTTGCA
TGTGCTATGTTTCTCTA--TATTTTTCCTACAAGATGTGAATAGCTACTACTTCCTCCGTTCCAAAATAGATGACCTAAC
TTTATACTAACTTTTATTAAAGTTAGTATAAAGTTAGGTCATCTATTTTGGAACGGAGGAAG------------------
-------------TAGATGGTAGTCCCTCCGTTTACAAATAGAAGATGTCTTGAATATTTTAATATAAACTAGTACTATA
TACATG-----CTGAAATGAGTGAACAAACACACTAAAACATATCTATATACATTCGTCTTAAAAT-AAGTTACAGTTCA
TAAATACTATAAAATGTTTTGCACATTTGAATATAAACTATATACTAACTGAAATGAGC-GAACAAACACACTAAAACAT
GTCTATGTCCAAATTTGACA------------------------------------------------------------
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---------AAT-----------------------------------ACCCCTTGTATTTTAGAGGAGTGAATATAGTAT
GCACGGTGGACCGTACTATCCCGCGTCGAGTGGGAGAAAGCGTCGTCCCAGCTTGTCAAG--------------------
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----------------------------------------------ACAGCCCTGTCTCCAAAAAAAAAGCAAGAAAAGA
AGAGCTAGCACGGGCCACGCA-CTGTTCGTGTCAGACATGTTAC----AACGATTTTTTATTGTTTTTTATCTGGAACCG
AACGACTTCTTTCTTTATCACCAGCTCTCCCAGGCACACATGGGCGCTCTGGTCAGTCTGGCTCGTACCCAACC------
--------------------------------------------------------------------------------
-----------------------------------
>chr2B_56
-------------------------------------------------------AGCAGATCGCCACCGGCAGAACGGT
CGCG-CCAGACCCAGACATGTCG-GAGGAGGAGGCGCTGCTCAAGTCCTACAGCTCCGCCTGCGGGATCCGCCTCACCCG
CTGGCGGTACCGACAGTGGGTGGCGGAGGTTGCGGCCGCCGGCAAGGAGTGCGACGACGATGTGGGCGAGGCGGTGTTCG
ACGAGACCGACGAT---GAG---------GAGGAAAACGCCGAGGCCACGCCA---CGCCGCCACCACGAGGAAGCCGAC
ACGTCCGCGGGCACCGCTCACATCGAGGAAGAGTAGTGCATGATAGGTTGCCGCCGCTCTGGTCCCAAGAATGCCACCGC
TCCTCCCCTCCTGTTGACACCAAACTTGGTGGGTTGAGCATCTTTGGCC-GATTAGTCACCTGGAGGCAATGTGGAGGAG
GACAACTTCACTTCCTGGGCCTCCGGAGGCGGAGGTTATGGAG-------------------------------------
---GCAGAGCTAGAAAAGG--CGAAGCTTCAGTTCTCTTAGTTCATGGCCGGACATGGGGAACGGGCGCCGACAACCATT
TAAACCCAG-CTAGATGAGTTCCACTTAGTTGATGTTAATGTAATGAAATCCGTCTTGTATAGATGAAATCCGTCTTGTA
TAGATGAAA-TCC-ATCATGTTTATATGTAATCTAGCCGTGTTTATTG--------------------------------
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-----------------------------------
>chr3B_56
-------------------------------------------------------AGCAGGTCGCCGCGAGCAGGGTTGT
CGCACCCGGACGCGGACCTGGCG-GAGCAAGAGGGGCTGCTCGAGTCCTACCGCTCCGCTCGTGAGATGCGCCTCGCCCG
CCGGCGGTACCGGCAGCGGGTGGCGGAGGTGGCGGCCGTCGGCAAGGAGAGAGACGACGACTCGGGCGAGGCGGTGTTCG
ACGAGACCGACGAG---GAG---------GA---CAGCGCCGAGGCCGAGCCA---TGCCGTCACCATGAAGAAGTCGGC
GCGTCCGCGGGCGCCGCCCACAGTGAGGAAGAGTACTGCGAGGTGGGTCGCCGCCGCTCTGGTCTGAGGAAGGCCACCGC
TCATCCCCTCCAGTCGACGCCAAGCTTGGTGGGCTGAGCATCTTCAGCCGG-TTAGTCGCTTGGCGGCGATGTGGAGGCG
GACAGCTTCACTTCCCGGGCCTGCGGAGAAGGAGGTTACGGAGACGGAGCTTGAGAGTGTCAAGG---------------
----CGGAGCTGGAGATGG--TGAAGTTTCAGTTCTCTTGGTTCATGGTTGTACAC-AGGAACAGGCGCCAGCGACCATT
TAGACCTAA--CAGACGAGCTCCGCTTAGTTGATGTAAATGTAATGAAATCCGTC--------------------GTGTT
TAGATGAAA-TCC-GTCATGTTTATATGAAATCTAACCGTGTTT------------------------------------
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-----------------------------------
>chr2A_56
-------------------------------------------------------AGCAGGTCACCGCTAGCAGGGCGGT
CGCG-CCGGACGCGGACCTGGCA-GAGCAGGAGATGCTGCTCGAGTCCTACCGCTCCGCCCGCGAGATCTGCCTCGCCTG
CTGGCGGTACCGGAAGTGGGTGGCGGAGGTGGCAGCTGCCGGCCAGGAGTGCGACAACGACGCAGGCGAGGCGTTGTTCG
GTGACACCGACGAT---GAGGACATCGCTGAGA------------CCGCGCCCCGACGCCAAGACCACGAAGAAGCCATC
ACATCCGCGGGCGCCGCCGACAACGAGGAAGAGTAGTGCATGGTAGGTCGCCACCGCTCGAGTCCCAGGAAGACCACCAC
TCCTCCCCTCCCGTCGACGCCAAGCTTGGTGGGCTCACCATCTTCGGCT-TATTAGTCTCTTGGCAACGACGTCGAGGC-
GACAACTTCAGTTCCCGGGGCTCTAGAGACGGAGGTCACGG---------------------TGG---------------
----CGAAGCTGGAAAAGG--TGAAGCTTCCGTTCTCTTGGTTCATGGTCGGAGACGGGGACCGGACGCCGGCAATCATT
TAGA----------------------------------------------------------------------------
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-----------------------------------
>chr2D_56
-------------------------------------------------------AGCAGGTCGCCGCCGGCAGGGCAGT
CGCG-CCGGACACGGACCTGGCG-GAGCTGGAGGCACTGCTCGAGTCCTACCATTCCACCCGCGAGATCCGCCTCGCCCG
CTGGCGGTACCGGCAACGGGTGGCGGAGGTGGCGGCCGCCGGCAAGGAGCGGGAGGACGACGCGGGCGAGGCGTTGTTCG
ACGACACCGACGAT---GAG---------GAGG------------CCGTGCCCCGGCGCCACGACCACGAAGAAGCCGAC
ACGTCCGCGTGCGTTGTTGACAGCGAGGAAGAGTAGTGCACGGTATGTCGCCACCGCTCGGGTCCCAAGAAGGCCACCAC
CTCTCCCCTCCTGTCGATGCCAAGCTTGGTGGGCTCAGCATCGACGACC-AATTAGTCGCTTGGCGGCGATGTCGAGGCG
GACAACTTCACTTCCAGGGGCTCCGGAGGCAGTGGTCACGGAG-------------------------------------
---ACGGAACTGGAAAAGG--TGAAGCTTCCGTTCTCTTGGTTCATGGCCGGAG-C-GGGATCGGACGCTGGCGATCATT
TAGAT-TAG-CCCGCCTAGGACCGCT---TTCATGTATTTTTAATAAAACCCGTC--------------------ATGTT
TATATGAAAATCCAGTCTT----------------------TTTATATGAAATCCG------------------------
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-----------------------------------
>chr1B_56
-------------------------------------------------------AGCAGGTCGCTGCCGGCAGGGCTGT
CGCG-CCAGACGCGGACCTGGCA-GAGCAGGAGGCACTGCTCGAGTCCTACCACTCCGCTCGCGAGATCCCCCTCGCCCG
CTGGCGGTACCGGCAGTGGGTGGCGGAGGTAGCGGCCACCAGCAAAGAGCGCAAGGACGACACGGGCGAGGCGTTGTTCG
ACGACACCGACGAC---GAG---------AAGGCT--------------------GCGCCCCGACCATGAAGAAGCCGAC
ACGTCCGCAGGAGCCGCCGACATCGAGGAAGAGTAGTGCATAGTAGGTCGCCGCCGCCCATGTCCCAGGAAGATCACCGC
TCCTCCCCTCCCGTCGACGCCAAGCTTGGTGGGCTCAACATCTTCAGCC-GATTAGTCGCTTGGCGGCGACGTAGAGGCT
GACATCTTCAGTTCCCGGGGCTCCGGAGGCGGAGGTCACAG---------------------AGG---------------
----CGGAGCTGGAAAAGG--CGAAGCTTCCGTTCTCTTGGTTCATGGCCGGAGACGGG-ACCGGACGCCGGCGATCATT
TAAAT-TGG-CCCGCCTAGGACCGCT---TTCATGTATTTCTAATGAAATCCGTC--------------------GTGTT
TATATGAAA-TCC-GGCATGTTTATATAAAATGAGGCTGTGTCTATATGAAATCCGCACTTGTTTGCATGAATTTTATTT
GATTGGTTTGAGTTGTTGTGAAAATGTATGCGG-----------------------------------------------
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-----------------------------------
>chr6D_59
----------------------------------------------------------AGGTCGCCGCCAGCAGGATGGT
CGCG-CCGGACGCGGACCTGGCG-GAGCAGGAGGCATTGCTCGAGTCCTGCCGCTCCGCCCGCGAGATCCGCCCCGCCCG
CTAGCGGTACCGACAGCGGGTGGCAGAGGTGGCGGTCGCCGGCAATGAGTGCGACGACGACACGAGCAAGGCATTGTTCG
GCGAGACAGGCGAGGAGGAG---------GAGGACAACGCCAAGGCCATGCCC---CGTCGCCACCACGAAGAAGGCGGC
ACGTCTGCGGGCGCCACCAGCAGCGAGGAAGAGTAGTGCGTGGTAGGTCGCTGCCGCTCTGGTCGCAGGAAGGCCACCGC
TCCTCCCCTCCCGTCGATGCCAAGCTTGGTGGGATGAGCATCTTTAGCC-GATTAGTTGCTTGGTGGCAATGTGGAGGCG
GACAACTTCACTTTACGGGCCTTCGGAGGCAGGCGTTATGA---------------------AGG---------------
----CAGAGCTGGAGA-GCGTCGAAGCTTTAGTTCTCTTGGTTCATGGCCGGACATGGGGAATGGGCGTCGTCGACCATT
TAGACCTAG-CCAGATGAGCTCCGCTTAGTTGATGTAAATGTAATAACATTTGTCATGTATAGATGAAATCCTTCAAGTT
TAAATGAAA-TCC-ATCATGTTTATATGAAATTCGGTTGTGTTTATATGAAATTAGATCGTGTTTGATCGAATTTCGTCT
GATCAGTTTGAGTTGTTGTCAAAATGTATGCGGCTAGTGTTGGATGGCGGCCTC-CCGCATCCGTGTCC-----------
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-----------------------------------
>chr2D_65
CCGCCGACT-----------------------------------------------------------------GGGGGT
CGCG-CCGGACACGGACCTGGCA-GAGCAAGAGGCGCAGCTCGAGTCCTACCGCCCCGCCCGCGAGATCATCCTCGCCCG
CTGGTGGTACTGGCAGCTGGTGGCGGAGGTGGCACCTGCCGGCAATGAGCGCGACGATGACATGTGTGAGGCGTTGTTTG
GCAACATCGATGAC---GAG---------------------GAGGCCGCGCCCTGGCGCCACGACCACGAAGAAGTCGGC
ACGTCCGTAGGCGCCACCAGCGGCGAGGAAGAGTAGTACACGGTATGTCGCCGCCGCTCGGGTCCCAGGAAGGCCACCGC
TCCTCCCCTCCCATCGGCGCCAAGCTTGGGGGGCTCAGCATCTTCGGCC-GATTAGTCGCTTGGCGGCGACATCGACGCG
GACAACTTTAGTTACCGGGGCTCCGAAGGCGGACGTCATGG---------------------AGG---------------
----CGGAGCTGGAAAAGG--CGAAGCTTCTGTTCTCTTGGTTCATGGCCGGAGACAGGGACCGGACGCAGGCGATCATT
TGGAT-TAGCCCCGCCTAGGACCGCTT--TTGATGTATTTGTAATGAAATCCGCC--------------------ATGTT
TATATGAAA-TCCGGGTATGTTTATATGAAATCAGGACGTGTTTATATGAAATTCGGACTTGTTTGAACGAATTTCATCT
GGTTGGTTTGAGTTGTTGTAAAAATGTATGCGGCTAG-------------------------------------------
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-----------------------------------
>chr7B_68
-------------------------------------------------------------------CCGGCAGGGCGGT
CGTG-CTGGACGCGGACCTAGCG-GAGCAGGAGGCACTGCTCGAGTCCTACCGCTCAGCCCGCAAGATCCGCCTCGCCCG
CTGGCAGTACCGGCAATGGGTGGTGGAGGTGGCAACCGCAGGCAAGGAGTGCAATGGCGACGTGGGCGAGGCGGCGTTCA
GCAAGACCAACGAG---GAG---------GAGGACAACACAGAGGCCGCGCCC---CACCGCCACCATGAAGAAGCCGAT
ACGTCTGCGGGCACTGCTGGCAGCGAGGAACAGTAGTGCACGGTAGGTCGCCGCCGCTCTGGTCCCAGGAAGGCCACCGC
TCCTTCCCTCCCTTCGACGCCAAGCTTGGTGGACTAAGCATTTTAGGCC-GATTAGTCGCTTGACGGCGATGTGGAGGCG
GACAGCTTCTCTTCCTGGGCCTCCGGAGAAGGAGGTTACGG---------------------AGG---------------
----CGGAGCTGGAGATGG--TGAAGTTTCAGTTCTCTTGATTCTTGGCCAGACACGGGGAACAGACGCCGGCAACCATT
TAGACCTAG-CCGGACAAGCTACGCTTAGTTGATGTAAATGTAATGAAATCTGTC--------------------ATGTT
TAGATGAAA-TCC-GCCTTGTTTAAATGAGATCTGT-CATGTTTAGATGAAATCC-------------------------
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-----------------------------------
>chr7D_77
CGGTCGC-------------------------------------------------------------------------
--CG-CCGGACGCGGACCTTGCA-GAGTTGGAGGCGCTGCTCGAGTCCTACCGCTCCGCCCGCAAGATCCGCCTCGCCCG
CTGGCGGTACCGACAGCGGGTGGCGGAGGTGACGACCGCTGGCAAGAAGTGCGATGACGAGGCGGGTGAGGCGTTGTTCG
GCAAGACCGATGAG---GAG---------AA---CATCGTCGAGCCCGCGCCTCGACGCCATGACCACGAAGAAGCCGGC
ACGTCCACAGGCTTTGCTGGCAGGGAGGAAGAGTAGTGCATGATAGGTCGCCGCCGCTCGTGTCCCAGGAAGGCCACCGC
TCCTCCCCTGCCGTCGACGCCAAGCTTGGTGGGTTGAGCATCTTTCGCC-AATTAGTTGCTTGGCGGCGATGTGGAGGCG
GACAGCTTCACTTCCTGGGCCTCGGGAGGCGGAGGCTAAGG---------------------AGGAAGAGGTGGAGAGCG
CCGACGGAGCTGGAAAAGG--CAAAGCTTCAGTTCTCTTGGTTCATGACCGGACACGGGGAACGGGTGGCGGCGACCATT
TAGACCTAG-CCGGACGAGCTCCGCTTAGTTGATGTAAATGTAATGAA-TCCGTCATGTATAGATGAAATCCATCAAGTT
TAAATGGAA-TCC-GTCATGTTTATATGAAATTTGACCATGTTTA-----------------------------------
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-----------------------------------
>chr4D_104
--------------------------------------------------------------------------------
------------------------GAGCAGGAGGCGTTGTTCGAGTCCTACCGCTCCGCCCGCGAGATCCCCCTCGCCCG
CTGGCGGTACCGGCAGCGGGTGGCGGAGGTGGTGG-CGCCGGCAAGGAGAGCGACGATGACGCGGGCGAGGCGGTGTTCG
GCGAGACCAACGAGGAAGAG---------GAGGACAACACCGAGGTCGCGCCC---CGCCGCCACCACGAAGAAGCCGAC
ACGTCCACGGCCGTCGCCGGCAGCGAGGAAGAGTAGTGCAC-GTGGGTCGCCGCCGCTCTGGTCCCAGGAAGGCCACCGT
TTTACT-CTCTCGTCGACGCCAAGCTTGGTCGGCTGAGCATCTTCGGCC-GATTAGTCGTTTGGCGGCGACGTGGAGGCG
GACAACGTCACTTCCCGGGCCTCCGGAGAAGGAGGTTACGG---------------------AGG---------------
----TGGAGCTGGAGAAGG--TGAAGCTTCAGTTCTTTTGGTTCATGGCCGGACACGAGGAACGGGCGCCGACGACCATT
TAGACCTAA-TCGGACGAGCTCTGCTTAGTTGATGTAAATGTAATGAAATCCATC--------------------ATGTT
TAGACGAAAATCC-GTCTTGTTTATATGAAATCTGGCCGTGTTTATATGAAATCCGGTCGTGTTTGATCGAATTTCGTCC
AGTTAGTTTGAGTTGTTGTGAAAATATATGCGGCTAGCGTTGGATGTC--------------------------------
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>chr6D_832
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------------------------------------------------TAAGAACAAAGACCACAAC----TGTATTTTA
GTTCCTCCCAGTCCATAAGTACCCCACACAGACT-CAGAGTTCAAATTACGAAGTCAATGCCAGCAAGCTCCAACTTCCT
CCTCCCTCCAACACCCTCCGG---------CTCCAAGATCTGAATCAAGAAACCCGCCGGCGATGGGGCTCTGCGACTGC
CTGGGCGAGTGCTGGGAAGATTGCAAGTGGGTATTAGCGTGCATCGCCGCCGTCGCCGCTGTCATCGTCATCGTCGTCAT
GGTCGCCGCCTACAGCTTCGCCGTCCAGCCATCCATCACCGTCGAGGACGCCTCGCTGACCAGGTTCGCGCTGGCGACCT
CTCCGGTGACCTCGCTCGGGTACAACCTCTCCCTGAAGCTCGTCGTCCGCAACCGCAACTGGGCGACGACCATGAAGAAC
ACGGAGCCGCTGGAGGCGGCGTACAAGTTCGACGGCCAGCAGTTCGAGCGCGTGCAGGTCGCCGACAAGGGCGACAAGCA
CGGCCCCAGGAAGACCCGGGTGTACCGCCTCGACTCTGGCTCGGACAGCGCCTACGCGGCGCTGGGCAACGCCGGCGTCG
CCGCGTACAAGGACCAGAACAAGACGGGGGAGTTCGAGCTGGAGGTGGCGGTCACCGGCGAGGTGCGGTACACGCTGCAG
CTGAAGAAGAACAAGCTGGCGGGGACCTGCAAGCTCAAGCTGAAGCTCGACTCGCCGTCGACGGCCTCCGTTGTGTTCGA
GAGGGTGAAATGCAAGCTCGAGAAGGAGAAGAAGGACAAGGAGTAGTTAATTTTCTAG---CTACTGTGTACTGTATGGT
TTTCATCCAAAGTTCCAAGCAATCTCTGGCGGCCGGTTGCCAACTTGCCATATCGAGTAGTTGTAGTACTTCTCAATT-A
TTTGATTCCTTCC------TTATCCTTA----AAAAGATTTTTGATGGTGAATCTTGGTTGCTATTATTTGAAATTTGCA
TGTGCTATGTTTCCTCA--TTTTGTTGCTATAAGATGTGAATAGCTAGAGGGTTTTTCAAGAACACACACTGTGTGTCTT
CTGTATTAAGATGAAATTGCTAGATACCACTAAGAATAAGCGGTTAGCTATCTAATAAACAATCAACAACTCAAAAAAAG
AAGATAAAATTGCTAGATGGTAGTCCCTTCGTTCATAAATATAACATGGTTTCGATATTTCAATATATACTATAG-----
----------ACTGAAATGAGTGAGCAAACACATTAAGACGTGTTTATATACATATGATTCACAAGAAAGATAGAGTTCA
CAAATATTATAAGATGTTTTGCATATTGCAGCATGGACTATATATGGATGAAATAAATGAAAACAAACACACTAAAACGT
ATTTATATACATCTAATTCAGAAGAGAAAATTAGAACATCTTATATTAGTGTT-GGAGGGAGTAGCATTTATCCATATAT
TTT-AAAGACGGTATTATAAAAGTTAATGCATTTTCTAATATAATGGGTCAATTTCTACAAAGTTTGACATCGAATAAAT
CTAATATGCACTACACTTATAT-----------------------------------TTTAGGAGGAGTGAACATAGTAT
ACACGGTGGTTCGTACCATCCCGCGTCGAATGGGAGAAAGCGTCGTCCCAGTTTGGTTATGATGCGGTTGTGCCTTCCAC
TGTCTGGATGGAGCACATGCCTGACTTTGTAAATGCATTGGTTGCTACGCAAAGTCATTTTGAGCGGTTTTGTCATGTAC
CGGTAACCAATCCATCACTCATGCATGCATTCAGATTTGTGTCGCTGTGAGTATTCTATTCTCACTTTTTTGCTATACTG
AAGATATACTTCATCAAATACAGCTAGTAGCCCCCACCTTTGTCAGTGATATGACAGGCATCACAGCATGTGACAGTGCA
CTCTCTCCCTTCTCTTACACATAAATCCACCCTTTTATTTCACCTTAGCTAAATTAAACCGTCCATATCATTTAAACTAT
AAGTTCATTTTTGAAATAATTCATATATTTGAATTCCTGACGTTAAGACCTTCAGAACTAGACCAATATTAGATACATTT
CAAACACGTTCAAATTTCAATGTTTCACATTTCAGATGCGAAACAAACCCATTTCACTAGAAAATTATGAAAAACTCATA
TTTCAATAGAAATATGTGAACCAACCTATTTCACATAAAACTTTTCTTACCCAAATATGAAACTGAAATGTCAATTTGTG
AAACTGGTTATTTCAAAATGTGTAACGGTTTATTTCAAAAGAGTGAAATATATTATTCTGAAAGATGTGCAATTGAAATA
GATGTGATGTTTGTGAAGCAAGCTAGTGGAAAGTGAAATAATTTATTTCAAAAGAGTGAAATAGGTTATTTGAAAAATGT
GCAATCGAAATATATGTCATTTTTGTGAAACAAGGTAGTAAAAAGTGAAATGTAGGTTTTGAATTATGAAAGAGTAACTA
CAGAAAGTGAAATTCGGTTGTGTCGTTTGTGAAACTGATTATTTGAACATGTGTAGTAGTTTACTTCAAAAGAGTGAAAT
GCGTTATTTGAAAAATATGCAATTTTAATAGGTGTTTTCTTTTGTAAAGCAAGCTAGTGAAAAGTGAAATGTAGGTTCTG
GACTGTGTAATAGTCACTATGAAAAGTGAAATTGTAATGTAACATTGTGAAACTGATTATTTTGACATGTGAAATATACA
TTCTAATTTAAATGTGCTCAAAAAATATCCAAGATTGATCTCATTTTAAAGGGCACAAGGAGTTCAAATATAAAAAAGTT
TCAAAAAAGAATATATGGTTTAAAAGATATGGATGTTTTAAATTAGCTAAGGCGGAAGAAATGGTTGGATTTATTGTGTG
GGAGAAGAAAAAGTGATTCTGCCACACTGTCATGCATGCATGTGAAATACACCGGTGGGGCCTATCTGGTAAAGAAAGAG
AGTGATAATACAAAGATGAATAATTCAGAAAAGAAGTGCAATACAATGATACTCGACCCATATAGTGTGAGATGGCAGCT
CCCAATTCGAGACCAACTTGCTAATACCTGGCGAAACCGCGTAATTTTACTTTTCGTTGGTTGCTAGCGATTCTGCTGCA
CCAACTTTATAATGGACTGTTTCCGTGTAAAAAAGAAAAGGCTAGCACAGCCCTCTCGCCAACAAAAAAAAACTAT----
--------CACA-ACCACGCACCTGTTCGTGTCAGACAAGTTAC----AACGATTTTTTATTGTTTTAATT-TGGAACCG
AACGACTTCTTTCTTTATCACCAGCTCTCCCAGGCACACATGGGCACTCCGGTCCGTTTGGCCCGTGGCCAACCATGTGC
ACATCAACCGATTTGAAGGCGCGCAGGTTTCGCTGAAACTACAG------------------------------------
-----------------------------------
>chr6A_832
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------------------------------------------------TAAGAACAAAGAGCGCAAC----TGTATTTTA
GTTCCTCCCAGTCCATAAGTACCCCACTCAGACT-CAGAGTTCAAATTACGTAGTCAATGCCAGCAAGCTCCAACTTCCT
CCCCCATCCAACACCCTCCGG---------CTCCAAGATCTGAATCAAGAAACCCGCCGGCGATGGGGCTCTGCGACTGC
TTGGGCGAGTGCTGGGACGACTGCAAGTGGGCATTAGCGTGCCTCGCCGCCGTCGCCGCTGTCATCATCATCGCCGTCAT
GGTCGCCGCCTACAGCTTCGCCGTCCAGCCATCCATCACCGTCGAGGACGCCTCGCTGACCAGGTTTGCGCTGGCGACCA
CCCCGGTGACCTCGCTCGGGTACAACCTCTCCCTGAAGCTCGTCGTTCGCAACCGGAACTGGGCGACGACCATGAAGAAC
ACGGAGCCGCTGGAGGCGGCGTACAAGTTCGACGGGCAGCAGTTCGAGCGCGTGCAGGTCGCCGACAAGGGCGACAAGCA
CGGCCCCAGGAAGACCCGGGTGTACCGCCTCGACTCGGGCTCAGACAGCGCCTACGCCGCGCTGGGCAACGCCGGCGTCG
CCGCGTACAAGGAGCAGAACAAGACCGGGGAGTTCGAGCTGGAGGTGGCGGTCACGGGCGAGGTGCGGTACACGCTGCAG
CTGAAGAAGAACAAGCTGTCGGGGACCTGCAAGCTCAAGCTGAAGATCGACTCGCCGGCGACGGCCGCCGTGGTGTTCGA
GAAGGTGAAATGCAAGCTCGAGAAGGAGAAGAAGGA------GTAGTTAATTTGCTAGCTAC---TGTGCACTGTATGGT
TTTCATCCAAAGTTCGAAGCAATCTATGGCGGCCGGTTGCCAACTTGCCATATCGAGTAGTTGTAGTACTTCTCAATT-A
TTTGATTCCTTCT------TTATCCTTATGTAAAATGATTTTCGATGGTGAATCTTGG----------------------
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-----------------------------------
>chr6B_835
--------------------------------------------------------------------------------
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---------------------------------------------------GAACAAAGACCACAACTAGGTGTATTTTA
GTTCCTCCCAGTCCATAAGTACCCCACTCAAGACCCAGAGTTCAAATTACGAAGTCAATGCCAGCAAGCTCCAACACCCT
CCCCCATCCAACGCCCTCCGG---------CTCCAAGATCTGAATCAAGAAACCCACCGGCGATGGGGCTGTGCGACTGC
TTGGGCGAGTGCTGGGACGACTGCAAGTGGGCATTAGCGTGCATCGCCGCCGTCGTCGCTGTCATCATCATCGTCGTCAT
GGTCGCCGCCTACAGCTTCGCCGTCCAGCCCTCCATCACCGTCGAGGACGCCTCGCTGACCAGGTTCGCGCTGGCGACCT
CCCCGGTGACCTCGCTCGGGTACAACCTCTCTCTGAAGCTCGTCGTCCGCAACCGCAACTGGGCGACGACCATGAAGAAC
ACGGAGCCGCTGGAGGCGGCGTACAAGTTCGACGGGCAGCAGTTCGAGCGCGTGCAGGTCGCCGACAAGGGCGACAAGCA
CGGCCCCAGGAAGACCCGGGTGTACCGCCTCGACTCGGGCTCGGACAGCGCCTACGCGGCGCTGGGCAACGCCGGCGTCG
CCGCGTACAGGGAGCAGAACAAGACCGGGGAGTTCGAGCTGGAGGTGGCGGTCACCGGCGAGGTGCGGTACACGCTGCAG
CTGAAGAAGAACAAGCTGGCGGGTACCTGCAAGCTCAAGCTGAAGCTCGACTCGCTGGCGACGGCCGCCGTGGTGTTCGA
GAAGGTGAAATGCAAGCTCGAGAAGGAGAAGAAGGACAAGGAGTAGTTAATTTGCTAGCTCC---TTTGTACTGTATGGT
TTTCATCCAAAGTTCCAAGCAATCTATGGTGGCCGGTTGCCAACTCGCCATATCGAGTAGTTGTAGTACTTCTCAATTTA
TTTTATTCCTTCCTTACCCTTATG--TA----AACATATTTTCGATGGTGAATCTTGGTTGCTAGTGTTTGAAATTTACA
TGTGCTATGTTTCCCCA--TTTTTTTGCTACAAGATGTGAATAGCTAGATGGT---------------------------
--------------------------------------------------------------------------------
---------------------AGTCCCTCCGTTAC--AAATTACGATGTCTTGGATATTTTAATAAGAACTACCATATAC
ATACTGAAATATTGAAATGAGTGAACAGACAAACTAAAACATGTCTACATAAATTCAATTCAGGA-AAAAGTTGTGTTCA
CAAACACTATAAAATGTTCTGCACATTTCAATATGAACTATACAG--ACTGAAATGAAT-GAACAAACATACTAAAGCAT
GCCTATATACATTTGATTTTG--AAAAAAGTTAGGACATCTTATTTTTGCGAACAGAGAAAGTAGCATTTAACCATATTT
TTTGAAAGATGGTATTATAAATGTTAATGTATTTTCTGGTATAATGGGTCAAATTCTACAAAGTTTGACATCGAATAAAT
CTAACATTCCTCCCGCAAAAAAAAGAAGAATAAATCTAACATGCAACACCCCTTATATTTTAGAGGAGTGAATATAGTAT
GCACGGTGGTTCGTACGATCCCGCGTCGAATGGGAGAAAGCGTCGTCCCAGCTTGTCATTG-------------------
--------------------------------------------------------------------------------
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----------------------------------GCAAGAGCTAGCATAGCCCTCCCACAAAAAAAGAAAAAAGAAAAAA
AGAACTACCACA-GCCACGCA-CTGTTCGTGTCAGACATGTTAC----AACGATTTTTTATTGTTTTCATT-TAGAACCG
AAAGACTTCTTTCTTTATCACCAGCTCTCCCGGGCACACATGGGCACTCTGG--CGTTTGGCT-----------------
--------------------------------------------------------------------------------
-----------------------------------
>SNPs
------------S-S---S------------S--------S-----S--------------S------------------
-----S------------S--SSS--------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S----------------------------------------S-----------------S--------------
------------------------------------------------------------------------------S-
S---------------S-------------------------------S-------------------------------
------------------------------------------------------S----------S--------S-S---
-S--S-S----S---------------------S------------------------------S-------SSS-S-SS
--------------------------------------------------S----------------------S------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
----------------SSS------S------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------------------------------S---------------
SS----------------------------------------------------------------------------S-
----------------------------------------------------------------------------S---
-------------S------------------------------------------------------------------
---SS---------------------------------------------------S--S--------------------
S-------------------------------------------------------------------------------
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---------------------------------------------S----------S----S----------S--S----
-----------------S-------------------------SSSSS-----------------S--------------
--S-----------------------------------------------------------------------------
--------------S------------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_567
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GACGGATGTTACG
GAGGCAT-------------------------------------------------------------------------
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-----------------------------------
>reverse_4126
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---------------------------------------------TACAGCCCTCTTGCCAGAAA---------------
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-----------------------------------
