>input_sequence_74065
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--------------------------------------------ATGGCCATGGCCACGCAAGCCTCGGCGGCGACGCGC
CACCTGATCACCGCGGCCTGGTCGCCATCCGCCAAGCCCCGCCCCGCCACCCTCGGCATGC---CCTCCGCCCGTGGCCC
GGCCCCGCTCTGCGCCGCGGCCCCGGACACCCCCGCCCCCGCCGCGCCGCCGGCGGAGCCCGCCCCCGCGGGCTTCGTGC
CGCCGCAGCTGGACCCGTCCACCCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGCCTCCTCCGCAAGGCCCAGGTCGAG
GAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTGTTCGAGATGCCCACCGGCGGCGCCGCCATCATGCGCGA
GGGCCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCAAGTACAAGATCG
CCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCGGAGAAGGTC
AACGCCGGCAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAAGTTCACCGG
CAAGAACTCCTTCGACATCTAA----------------------------------------------------------
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>chr5D_1_TraesCS5D01G468400
GAGACCTATTGTGACACTGTTATATTCAGAAATTTGACATGTTATATTCAGAAACTTGCGAATTGAGCCTATCTCAGATG
GTTAGTTTCTTTGTGGTGGAACCATCCCACCAGGGTTCAAGTCCTAGACTTGACATTGGTGTTCGCATTCTTCTGGATTT
ATTCCAGACTTTCCAACGATACTCGTTCAACGAGAGGATACATTTCCGTGGACTATGGAGGCGCCTATCTGATTTCGTCA
CTCTCAAGATGATGTGCCTACTCAGTCTCTACGAGGTGCTCATAGGGGTAGGATGTGCATACGTGCGTTCATATGAGTGA
GTGTATGTACGTATGTATGAACATTTGCGTCTGTACTATGTTAAAAAGGACCCCGATAACGCCCAAACGTTATTTTTTTG
ACAATGACAAATCAAACATTTTTATGGCAATTTTAATAACGTGAGGATGCCAAGTTTAATTGGCAAGCATGGCAAATTCA
TGCTTAGTGTATTTTTTTGCCAGGAAATTGTTGTGCATGTCTAACTAAACTTGCCAACCTCGCATCACTAAAATTGTCAT
TAAAAACGTTTGATTTGCCCTGATCAAATACCGCGGGTGTATTTTTCTTGCTTCGCCCGTCGCCCCGTGAACGTAAATGG
AACATAC---CCGTGGACTCGTGGAGAGTGATCCGAACATCGATCGTCGCGTGGCCGCTGCATGCCATGTCATTGGCATC
CGGGACCCGGCCGTGCATCTGCTTTGCATGTGTGTGTGGTGGCGGTGCGGAGAGCCCGGCCGTATCAAAATCGGCATTCC
CCATTGGCCGGCCTCATATCGCCATATCACCTTATCCACTCCCCCCACCCCCTCCA-CCCAAGCCCCCGTACCTCTTAGC
TCAGCCATCTCTCCTACTCATCACCCACCAGACACCACTCCATCTCCCGCGCGCGCGTGTGGCCTCCGCTCCTCTCCCCA
TCTCCTCTCTCGCCAAGGACCACCGAGCTTGGAGCGCCACCGCCATGGCCATGGCCACGCAAGCCTCGGCGGCGACGCGC
CACCTGATCACCGCGGCCTGGTCGCCATCCGCCAAGCCCCGCCCCGCCACCCTCGGCATGC---CCTCCGCCCGTGGCCC
GGCCCCGCTCTGCGCCGCGGCCCCGGACACCCCCGCCCCCGCCGCGCCGCCGGCGGAGCCCGCCCCCGCGGGCTTCGTGC
CGCCGCAGCTGGACCCGTCCACCCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGCCTCCTCCGCAAGGCCCAGGTCGAG
GAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTGTTCGAGATGCCCACCGGCGGCGCCGCCATCATGCGCGA
GGGCCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCAAGTACAAGATCG
CCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCGGAGAAGGTC
AACGCCGGCAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAAGTTCACCGG
CAAGAACTCCTTCGACATCTAATCTCGTACGTCGTATATGCGTACGTGCTAGTTCATCGACCGGTAGTTATTGGCGGGTG
GCGATGATGATGGACGTCCTGTAATTTTAATTGTCGAGTTTGAATGATGGATTCGATCGGTGATAATGATGCATCAGGTT
ATATGTACATGGTAATTTGATGATGATACTGCTGTATGTTAACGTTGTTCATATGCATGATCGGCTTCTTTTTATGTTGA
TGATGAGTAGTATTTTGTTTGTTACACGCGTACACGC---TTTTTTGTCGTTTTGGCCAGAGATGAAGCATACGATGTTT
AAACCATTCAACCTAGCACA--TAAGCACGGTAACCC-------GTGTGGGCAACGCCTTCTCTACGTATTGTTTTTGTG
AAAGTAATTACTGAAGATAAGATTTATGCTAAA-----------------------------------------------
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--------TCAGTTTACGTATCTGTATAATTGGTTATAATTTCATATACTCCCTCCGATCAAAATTAATTCTGGCTGAGG
GAACCATCTTTGTTGAAGTTGACTAGTAAGTTGCCCGTGCCTTGCTACGAAAGATAAAACATGTCTAGAAATATATTGCA
AAATTGATTTTATTTTTTGAACCCTGAACCACACACCCACTGGTTTCTT----ATAAACATGTATAGAAACATCGTTGAC
TAAATTTAGGATCCAAGCAGAAATACATTTAGGATTCTAGCACGAGGAATCGAGGAAATGGTTGAATGTGGTTTGTTCTA
CTGGCAGGTTTTCTGAAAACCAAAAAGAAAAGCTCATAGAAATGCAGAGGCAAACACACCATCACGACCAACTGAA-TTT
TTATAGGAGTAGAGATCAGAATTGACTAAGCATCTGATGTAGCCACATGATAACATCATCAAAATTGCCAGAAAAAAAAT
AAACTCACGAGTGAATGAAAGGAAAACTTGGGTCCATAAATAAGAAAGAACAAAGGTAGACCATAAATACACGGCTTCAT
ACAACAATTCCTCTCTCGAGACCTTGTCGGGCAAACAACACAAATATCAGTAAC
>chr5A_590
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-----------------------------ACCGCCGGTGCATTTTTCTTGCTTCGCCCGTCGCCCCATGAACGTAAACGG
AACATACGACCCGTGGACTCGTGGAGAGTGATCCGAACATCGATCGTCGCGTGGCCGCTGCATGCCATGTCATTGGCATC
CGGGACCCGGCCGTGCGTCTGCTTTGCATATGTGTGTGGCGGCGGTGCGGAGACCCCGGCCGTATCAAAATCGGCACTCC
CCATTGGCCGGCCTCATATCGCCATATCACCTTATCCACTCCCCTCACCCTCTCCACCCCAAGCCCCCGTACCTCTTAGC
TTAGC----TCTCCTGCTCATCACCCACCAGACACCACTCCATCTCCCGCGCGCGCGTGTGGCCTCCGCTCCTCTCCCCA
TCTCCTCTCTCGCCAAGAACCACCGAGCTTGGAGCGCCACCGCCATGGCCATGGCCACGCAAGCCTCGGCGGCGACGCGC
CACCTCATCACCGCGGCCTGGTCGCCCTCCGCCAAGCCCCGCCCCGCCACCCTCGCCATGCCATCCTCCGCCCGCGGCCC
GGCCCCGCTCTGCGCCGCGGCCCCGGACACCCCCGCCCCCGCCGCGCCGCCGGCGGAGCCCGCGCCCGCGGGCTTCGTGC
CGCCGCAGCTGGACCCGTCCACCCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGCCTGCTCCGCAAGGCCCAGGTCGAG
GAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTGTTCGAGATGCCCACCGGCGGCGCCGCCATCATGCGCGA
GGGCCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCAAGTACAAGATCG
CCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCGGAGAAGGTC
AACGCCGGCAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAAGTTCACCGG
CAAGAACTCCTTCGACATCTAATCTCGTACGTCGTATATGCGTACGTGCTAGTTCATCGACCGGTAGTTATTGGCGGGTG
GCGATGATGATGGACGTCCTGTAATTTTAATTGTCGAGTTTGAATGCTGGATTCGATCGGTGATAATGATGCATCAGGTT
ATATGTACATGGTAATTTGATGACGATACTGCTGTATGTTAACGTTGTTCATATGCATGATCGGCTTCTTTTCATGTTGA
TGATGAGTGGTATTTTGTTTGTTACACGTCTACACTATTTTTTTTTGTCCTTTTGGCCAGAGATGAAACATACGAG--TT
AAACGATTCAACCAAGCACATATAAACACGGTAACCCGCAGCATGTGTGGGAAACGCCTTCTCTACGTATTGTTTTTGTG
AAAGTAATTATTGAAGATAAGATTTATGCTAAACAGTTTTGCTAAAGCATATCTAGATGTGTCATAAGTATTGCACATCT
AAGTCATATGTTAGGCTGGTCACAATGGGGAGGAATTTAGGAGTAACATCACACACTCCAATACAACTTTGCTTATGTGG
CACATATTTAATGAAGAGAAAGGTGCTTGTGGTAACTAGCTAAGTTACCGGAACATCACACACTTCAAGAAACAATGAGT
CTAGAACCTAATAAATACATCGTTGCATGACACTACATAGATGTTCCTACCCACTATGGAGGTAGTAACATAGTCTAGGG
AAGTGTGTAAGTTACTAGCTTATGTTCTTGCCCATTGTGACCAGCCTTATTGATTTTACATTGAGATTCGCGTGTCATGT
GTGCTAAATTAATTTACGTATATGTATAATTGGTTATAATTTCATATACTCCCTCTGATCAAAATTAATTCTGGCTGAGG
GAACCATCTTTATTGAAGTTGACTAGTAAGTTGCCCGTGCCTTGCTACAAAAGATAAAACATGTCTAGAAATATATTGCA
AAATTGATTTTATTTTTTGAACCCTGAACCACACACCCACTGGTTTCTTAATTATAAACATGTATAGAAACATCGTTGAC
TAAATTTAGGATCCAAGCAGAAATATATTTAGAATTCTAGCATGAGGAATCGAGGAAATGGTTGAATGTGGTTTGTTCTA
TTGGCTGGTTATCTGAAAACCCAAAATAAAAGCTCATGGAAATGTAGAGGCAAACACATCATCACAACCAACTGATTTTT
TTATAGGAGTAGATATCAGAATTGACTAAGCATCTGATGTCGCCACATGATAACATCACCAAAATTGCCAGAAAAAAG-T
AAACTCACGAGTGGATGAAAGGAAAACTTGGGTCCATAAATAAGAAAAAACAAAGGTAGATCATAAATACATGGGTTCAT
ACAACAATTCCTCAGTCGAGACCTCATCAGGCAAACAACACAAATATCAGTAAC
>chr5B_657
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-------------------CGTGGAGAGTGATCCGAAT----ATCGTCGCGTGGCCGCTGCACGCCATACCATCC-----
--GGGCCCGGCCGTGCGCATACC-TGCACATGTGTGTGGTGGCGGTGCGGAGACACCGGCCGTATCAAAATCGGCACTCC
CCATTGGCCGGCCTCATATCGCCATATCACCTTATCCACTCCCC-CACCCCCTCCACCCCAAGCCCCCGTACCTCTTAGC
TCAGCCATCTCTCCTACTCATCACCCACCAGACACAACCCCATCTCCCGCGCGCGCGTGTGGCCTCGGCTCCTCCCCCCA
TCTCCTCTCTCGCCAAGAACCACCGAGCTTGGAGCGCCACCGCCATGGCCATGGCCACGCAAGCCTCGGCGGCGACGCGC
CACCTGATCACCGCGGCCTGGTCGCCCTCCGCCAAGCCCCGCCCCGCCACCCTCGCCATGCCATCCTCCGCCCGCGGCCC
GGCCCCGCTCTGCGCCGCGGCCTCGGACACCCCCGCCCCAGCGGCGCCGCCGGCGGAGCCCGCCCCCGCGGGCTTCGTGC
CGCCGCAGCTGGACCCGTCCACCCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGCCTCCTCCGCAAGGCCCAGGTCGAG
GAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTCTTCGAGATGCCCACTGGCGGCGCCGCCATCATGCGCGA
GGGGCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCAAGTACAAGATCG
CCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCGGAGAAGGTC
AACGCCGGCAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAAGTTCACCGG
CAAGAACTCCTTCGACATCTAATCTCGTACGTCGTATATGCGTACGTGCTAGTTCATCGACCGGTAGTTATTGGCGGGTG
GCGATGATGATGGACGTCCTGTAATTTTAATTGTCGAGTTTGAATGATGGATTCGATCGGTGATAATGATGCATCAGGTT
ATATGTACATGGTAATTTGATGATGATACTGCTGTATGTTAACGTTGTTCATATGCATGATCGGCTTCTTTTTATGTTGA
TGATGAGTAGTAA----TTTGTTACACGCGTACACTA---TTTTTTGTTCTTTTGGCCAGAGATGTAGCATGCGATGTTT
AAACCATTCAACCTAGCGCA--TAAACACGGTAACCCGCAGCATGTGTGGGCAACGCCTTCTCTACGTATTGTTTTTGTG
AAAGTAATTACTGAAGATAAGACTTATGCTAAA-----------------------------------------------
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--------TTAATTTAC--------ATAATTGGTTACGA-TTCATATACTCCCTCCGATCAAAATTAATCGTCGCTGAAG
GAACCATCTTTATTGAAGTTGACTAGTAAGTTTCCCGTGCCTTGCTACGAAAGATAAAACATGTCTAGAAATATATTGCA
AAATTGATTTTATTTTTTGAACCCTCAACCACACACCCACTGGTTTCTT----ATAAACATGTATAGAAACATCGTTGAC
TAAATTTAGGATCCAAGGTTCCTATCATGCATCCAAATTAACTACTACCAA-----------------------------
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TTATAGGAGTAGAGATCAGAATTGACTAAGCATCTGATGTCGCCACATGGTAACATCATCAAAATTGCCAGAAAAAAG-T
AAACTCGCGAGTGAATGAAAGGAAAACCTGGGACCATAAATAAGAAAGAACAAAGGTAGACCATAAATACACGGCTTCAT
ACAACAATTCCTCTCTCGAGACCTTGTCAAGCAAACAACACAAATATCAGTAAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S----S--------------------------S----------S--
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----------------S------------S-----------------------S----------------------S---
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-----------------S--------------------------------------------------------------
--------------------------S----------------------------S------------------S-----
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-----------------------------------SS------------S------------------------------
-------------------------S------------------------------------------------------
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---------S-S---------S----------------------------------------------------------
-----------S--------------------------------------------------------------------
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--------------------------------S---------S-------------------------------------
S----S----S----------S----S----------S------S-------------S------S---------S----
----------------------------------------S------------------------------------SS-
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----------------------------S-------------------------
>forward_228
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------------------------------------------------TGGACTATGGAGGCGCCTAT------------
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>reverse_1890
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-------------------------------------------------GTTTTGGCCAGAGATGAAGCA----------
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