>input_sequence_74048
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---------------------------------------------------------ATGGAGAGCGCAGCCGGCGGGGA
GCTACGGC------GGCACCGGTTCGTGCTCGTGCACGGCGTCTGCCACGGCGCGTGGAGCTGGTACAGGGTGGCCACGG
CCCTGCGGTCCGCTGGTCACCGCGTCGACGCGCTCGACATGGCCGCGTGCGGCGCCAGGCCCGGGCGCGCGGAGGAGGTG
GGCTCGTTCGAGGAGTACAGCCGGCCGCTGCTGGACGCGCTGGCGGCGCTGCCGACGGGGGAGAAGGCGGTGCTGGTGGG
CCACATCTACGGCGGCCAGAGCCTGGCGCTGGCCATGCAGGCGCACCCGGACAGGG---------CCGCCTTCGCCTCCG
CCGCCATGCCGGCCGCCGGGAAGCCCCTCAAGTTCGTCTCTGAACAGGTGAGCCC---CGCGCGCGCCCACTCGATCCAC
ACCTCTTCTCCCCCACCATGAACGAACCTAACACACTCGAT--------ATTACAGTTCGCGCAAGAAAGGGGCCCGGGT
TTCTTCATGGACAGCGTGATCGAGACCACCTCCGGCGACGACCCGCAACGCCCTTGCAAGACGTTCCTGCTCGGGCCGGA
GCAGTCGCGGAGCCAGAACTTTTCTAGAGCCTGGGCAAGCTTGAGCCTATGTGTCTAA----------------------
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-------------------------------------------------------------------
>chr3B_1_TraesCS3B01G493800
ACCTGGCCGCGTGCGGCGCCAGCCCGGTGCGCGTCGACGAGGTGCGCTCCTTCGCCGAGTACAGCCGGCCCCTGACCGAC
GCCGTGGCCGCGGTGCCGCCCGGCGAGAAGGTGGTCCTCGTCGGCCACAGCTACGGCGGCTACAGCCTCGCGCTGGCCAT
GGAGGCGCACCCGGACAAGGTGGCCGTCGCCGTCTTCGTCGCCGCGGCCATGCCGGCCGCCGGGTGCCCCATGTCACATC
TACTCTCGCAGGCA----CTGAAC---TACTACTGATCTGATCTA----------------------CCATAGGATTGAT
GACAACCTTTTGAATCATTTCTGCTGATCTCTCGTTCCAGATCATGGAGGAAACGGCGACGGACTCCGCCACGGACAGCG
TACCGGCCGTGACCGGCGGGGCGGAAACGTTTCTCCTGGGCCCCGAGCGCCTGTCACGGCGTCTGTACCAGCGAAGCTCG
GCCGAGGACCTGGCGCTGGCGACGGCGCTGGTGAGGCCGGCGCGGTGGTTCCTCGACGACGCGGCGATGACGGAGAGCGT
CCTGACCGCCGACAGGTACGGCGCGGTGAGGCGCGCGTGCGTGGTCACCGAGGAGGACGCGACTTGGGCGGCGGAGTCGC
AGCGCCGGATGGCGTCGCGGTGTCCCGGCGTGGAGGTGGCGGCCGTCGAGGGTGCCGACCACATGCCCATGTTCTCCACG
CCCCACCGGCTCGCGGCGGTCCTCATGGAGATCGCCGACAAGTACATCTGAGCTAGACATCAGCTCATCGCCGGTACTGG
CTGCCGTTTGCCATTGTTCGGCACTGATTCTTGCGCCGAAAGGAGAATCATCAACAGCTAAAAAAGCAGAGCATCTCGCT
ATCTTATGAACTGTACCAATAATAATTAATAA-------ACAATCGAAAA--TACTTTTCATACATCTCAACCACCACTC
GTAGAAAAGTGGAGAAATGGACGTGATCATGTCGCGTGGACTAAACTAGTCCAAGA------------------------
--------------------AAAGAGCTCGGCGGAC---------------AAAACGATGGAGAGCGCAGCCGGCGGGGA
GCTACGGC------GGCACCGGTTCGTGCTCGTGCACGGCGTCTGCCACGGCGCGTGGAGCTGGTACAGGGTGGCCACGG
CCCTGCGGTCCGCTGGTCACCGCGTCGACGCGCTCGACATGGCCGCGTGCGGCGCCAGGCCCGGGCGCGCGGAGGAGGTG
GGCTCGTTCGAGGAGTACAGCCGGCCGCTGCTGGACGCGCTGGCGGCGCTGCCGACGGGGGAGAAGGCGGTGCTGGTGGG
CCACATCTACGGCGGCCAGAGCCTGGCGCTGGCCATGCAGGCGCACCCGGACAGGG---------CCGCCTTCGCCTCCG
CCGCCATGCCGGCCGCCGGGAAGCCCCTCAAGTTCGTCTCTGAACAGGTGAGCCC---CGCGCGCGCCCACTCGATCCAC
ACCTCTTCTCCCCCACCATGAACGAACCTAACACACTCGAT--------ATTACAGTTCGCGCAAGAAAGGGGCCCGGGT
TTCTTCATGGACAGCGTGATCGAGACCACCTCCGGCGACGACCCGCAACGCCCTTGCAAGACGTTCCTGCTCGGGCCGGA
GCAGTCGCGGAGCCAGAACTTTTCTAGAGCCTGGGCAAGCTTGAGCCTATGTGTCTAATGTCGAAATTAAAATGTGATG-
--TTCTGATAGATA--CAACATATAAAATAGCCCCGAACTTCGTTACCAGAAATCATTAATAACAA-AAAAAAA-CGAAT
TTAAAAACAAGGTCATAAAAATATAGTTTCAAAGTGGACTAATATGTAACATATCGATATTCAGTTTCATAGACCAAAAT
GAATTTGAGACTTGACAATGAAAGTCATAGAAGCAGGCCAG-----------------CGGACATGGAGTATTTGATCCC
GAGCTCACATGCTCCCGCATGAACAGTACAATCCA--------------AAAAAATAGTAAATTTTTTTCAAAAAATCTG
A--T-TTTTTTGTGATGAACATTGATGGATTTTCTAACTGCGTGCAAAATTTCAGGTTGA-----CATTCGTGGAGGTCT
AGGTAAAAATA-TTAAAATCGATGGTCCAAA-------------------------------------------------
--------------------------------------------------------------------------------
------------AAAACTATTGTTGGAAGCATTTTGGAGCATCGATTTTGTTATT-TTTGCCCAGACCTCCACGAATGTC
ATTTCAACCTAAAACTTTGCACGCAGTTAGAATATTCATCA-TGTTCATCACAAAAAAAATCAGATTTTTTTTTAAACTT
TTACTATTTTTTTGAATTTTACTGTTCATGCAGGAGC-TATGAGCTCGGGATCAAAAGAGCACTTTCGCAAACTAACCTC
ATTCCACGCAAAAGTATAGCTATCCAAATTACCATCCAAATGTCCTAAAAAAATATTACTCTCTCTGTAAAGGAATATAA
GAATA---------------------------------------------------------------------------
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------------------------------------------TTTAGATCACTACTTTAGTAATCCAAACGCTCTTATAT
TTCTTTACGGAGGGAGTACAATATAAAAAACAGATTCGGAGTTCACATAAATTCA-------------------------
-------GAGCTTGTAGGAATAAATGGAACATAGAATAGTGTGTTAA-AGAAAATCACGAGGCAGATGTAATTTGTGATA
ATTGGTTGCGATGAATGTTCGAATACTATTTTTATCATGATCTAGCTTGAATAAATTTCAACAGGTTGACCTACAT----
------------------------GTGTGGATAGGCACATCAGTTAGCAATCTTACTTAATCTGATT
>chr3A_1
ACCTTGCCGCGTGCGGCGCCAGCCCGGTGCGCGTCGACGAGGTGCGCTCGTTCGCCGAGTACAGCCGGCCGCTAACCGAC
GCCGTGGCCGCGGTGCCGCCGGGCGAGAAAGTGGTGCTCGTCGGCCACAGCTACGGCGGCTACAGCCTCGCGCTGGCCAT
GGAGGCGCACCCGGACAAGGTGGCTGTCGCCGTCTTCGTCGCCGCGGCCATGCCGGCCGCCGGCTGCCCCATGTCACATC
TACTCTCGCAGGTACCGACTGAACTTCTAGTACTGACGTGATCTTCCACTCGATTGGTTAGATCCATCGATACGATCGAT
GCCAATCTTTTGAATCTTCTCTGCCATT---TCGTTCCAGATCATGGAGGAAACCGCGACGGACGCCGCCACGGACAGCG
TGCCCGCGGTGATCGGCGCGGCGGAAACGTTTCTCCTGGGCCCCGAGCGCCTGTCGCGGCGGCTGTACCAGCGAAGCTCG
GCCGAGGACCTGGCGCTGGCGACGGCGCTGGTGAGGCCGGCGCGGTGGTTCCTCGACGACGCGGCGATGACGGAGAGCGA
CCTGACCGCCGACAGGTACGGCGCGGTGAGGCGCGCGTGCGTGGTCACCGAGGAGGACGCGACGTGGGCGGCGGAGTCGC
AGCGCCGGATGGCCTCGCGTTGCCCCGGCGTGGAGGTGGCGGCCGTCGAGGGTGCCGACCACATGCCCATGCTCTCCACG
CCCCACCAGCTCGCCGCGATCCTCATGGAGATCGCCGACAAGCACATCTGAGCTAGCCATCAGCTCATCGTCGGTACAGG
CTGCCGTTTGCCGTTCGCCGGCG------------------------------ACAGCTGAAGAAGCAGAGCATCTCGCT
GTCATATGGACTAGCAGTGCATTATTCCAAAGCCTTGTCACAATCAAAAA--TACTTTTCGTACAGCACAACCACCACTC
GTACAAAAGTGGAGAAATGGACGTGATCATGTGGCGTGGACTACCACTGCACTTGTCCA---------------------
-GGGGATTTGTACCAGCGAGAGAGAGCTCGCCGGCCCGTGAACCGAGAGG----CCGATGGAGAGCGCGGCCGGCGGGGA
GAG------GCGGGGGCACCGGTTCGTGCTCGTGCACGGCGTCTGCCACGGCGCGTGGAGCTGGTACAGGGTGGCCGCGG
CCCTGCGGTCCGCCGGCCACCGCGTCGACGCGCTCGACATGGCCGCGTGCGGCGCCAGGCCGGGGCGCGCCGAGGAGGTG
GGCTCGTTCGAGGAGTACAGCCGGCCGCTGCTGGACTTGCTGGCGGCCCTGTCGCCGGGGGAGAAGGCGGTGCTGGTGGG
CCACAGCTACGGCGGCTAGAGCCTGGCGCTGGCCATGCAGGCGCACCCGGACAGGGTCGCCGTCGCCGTCTTCGCCTCCG
CCGCCATGCCGGCCGCCGGGAAGCCCCTCAAGTTCGTCTCCGAACAGGTGAGTCCGCGCACGCCTGCCCTCTCGACCCAC
ACCCCCACG---CCACCATGAACGAACCTAACACACTCGATGTCTCGATATTACAGTTTGCGCAAGAAAGGGGCCCGGGT
TTCTTCATGGACAGCGTGATCGAGACCACCGGCGGCGACGACCCGGAGCGCGCTTGCAAGACGTTCCTGCTGGGGCCGGA
G-------------------------------------------------------------------------------
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>chr3D_1
ACCTGGCCGCGTGCGGCGCCAGCCCGGTGCGCGTCGACGAGGTGCGCTCGTTCGCCGAGTACAGCCGGCCACTGACCGAC
GCCGTCGACGCGGTCCCGCCAGGCGAGAAGGTGGTCCTCGTCGGCCACAGCTACGGCGGCTACAGCCTTGCGCTGGCCAT
GCACGCTCACCCGGACAAGGTGGACGTCGCCGTCTTCGTCGCCGCGGCCATGCCGGCCGCCGGGTGCCCCATGTCACATC
TACTGTCGCAGGCACTGGCTGAAC---TACTACTGATCTGATCTTCCACTCAATTGCTGTGATCCATCCACACGATCGGT
GACAATCTTT-GAATCTTCTTTGCCATT---TCCTTCCAGATCATGGAGGAAACGGCGCCGGACGCCGCCACGGACAGCG
TGCCCGCGGTGACCGGCGGGGCGGAAACGTTTCTCCTGGGCCCCGAACGCCTGTCGCGGCGTCTGTACCAGCGAAGCCCG
CCCGAGGACCTGGCGCTGGCGACGGCGCTGGTGAGGCCGGCGCGGTGGTTCCTCGACGACGCGGCGATGACGGAGAGCGT
CCTGACCGCCGACAGGTACGGCGCGGTGAGGCGCGCGTGCGTGGTCACCGAGGAGGACGCGACGTGGGCGGCGGAGTCGC
AGCGCCGGATGGCGTCGCGGTGCCCCGGCGTGGAGGTGGTGGCCGTCGAGGGGGCCGACCACATGCCCATGTTCTCCACG
CCCCACCGACTCGCCGCGATCCTCATGGAGATCGCCGACAAGTACATCTGAGCTAGCCATCAACTCATCGCCAGTACAGG
CTGCCGTTCGCCGGAAACAGCGA------------------------------------AAAAAAGCAGAGCATCTCGCT
GTCATAAG---------------------TAA-------ACAATCCAAAGTGTACTTTTCATTCAGCACAACCACCACTC
AGA-AAAAGTGGAGAAATTGAGGTGATCATGTCGCGTGGACTACCACCACACTTGTCCACCTTGTGTCGCAATCCAGCCC
AGGGGATTTGTACCAGCAAGAAAGAGCTCGGCGGACCGTGAACGGAGGGACAAACCGATGGAGAGCGCCGGCGCCGGCGA
GGAGCGGCCGCGGGGCCACCGGTTCGTGCTCGTGCACGGCGTCTGCCACGGCGCGTGGAGCTGGTACAGGGTGGCCACGG
CCCTGCGGTCGGCCGGCCACCGCGTCGACGCGCTCGACATGGCCGCGTGCGGCGCCAGGCCGGGGCGCGCCGAGGAGGTG
GGCTCGTTCCAGGAGTACAGCCGGCCGCTGCTGGACGCGCTGGGGGCGCTGCCGCCGGGGGAGAAGGCGGTGCTGGTGGG
CCACAGCTACGGCGGCCAGAGCCTGGCGCTGGCCATGCAGGCGCACCCGGACAGGGTCGCCGTCGCCGTCTTCGCCTCCG
CCGCCATGCCGGCCGCCGGGAAGCCCCTCAAGTTCGTCTCCGAACAGGTCAG--CGCGCGCGCCCACCCTCTCGATCCAC
ACCCCACG-CCCCCACCATGAACGAACCTAACACAACA-----CTCGATATTACAGTTTGCGCAAGAAAGGGGCCCGGGT
TTCTTCATGGACAGCGTGATCGAGACCACCGGCGGCGACGACCTGGAGCGCGCTTGCAAGACGTTCCTGCTGGGGCCGGA
G-------------------------------------------------------------------------------
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>chr4B_1557
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-------------------------------------------------------------------------------A
GCAGTGGCGGAGCCAGAACTTTTTTCGAGCCTGGGCAAGCTTGAGCCTAAGTGAGTAATGTCGAAATTAAAATGTGATG-
--TTCCGACAGATATACAACATATAAAATAGCCTCAAACTTTCGTACCACAAATCTGCATCAATAACGAAAAAA-CGAAT
TTAAAAACAAAGTCATACAAATGTGGTTTTAAAGTGGACTAATATGTAACATATCGATATTCAGTTTCATGGACCAAAAT
AAATTTGAGACTTGACAATAAAAGTCATAGAACAAGGCCATGCATGGAAC------------------------------
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--------------------------------------------------------------------CAAACTCACATT
GTTCCAAGCAAAAGCATAGCT------------ATCCAAATGTCCTAAAAAAACACTACAAGATAAA-------------
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------------------------AAAAAACAGATTCGTAGTTCACATAAATTCATCAGTGTAATTTGTTGATATATTCA
AAATAGAGAGCTTGTAGGAATAAATGGAACATAGAATAGTGTGTTAAAAGAAAATCACGAGGCAGATGAAATTTGTGATA
CTTCGTTCCGATGAATGTTCGAATAATATTTTTATCATGATCTAACTTGAATAAATTTCAACAGTCTGACCTTAAAATCT
AAGCCCTAATCTATCCATCCCTAGGTGTGGATAGGCACATCAGTTAGCAATCTTACCTAATGTGATT
>chr2A_1557
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-------------------------------------------------------------------------------A
GCAGTGGCGGAGCCAGAACTTTTGTCGAGCCTGGGCAAGCTTGAGCCGAAGTGTCTAATGTCGAAATTAAAACGTGATGT
TGTTCCGATAGATA--CAACATATAAAATAGCCTCAAACTTCCGTACCACAAATCCACATTAATAACGAAAAAA-CGAAT
TTAAAAACAAAGTCATACAAATGTGGTTTTAAAGTGAACTAATATGTAGCATATCGATATTCAGTTTCATAGACCAAAAT
GAATTTGAGACTTGACAATAAAAGTCATAGAACAAGGCCATGCATGGAAC------------------------------
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--------------------------------------------------------------------CAAACTCATCTT
GTTCCAAGCAAAAGTACGGCTATCCAAATTACCATCCAAATGTCCTAAAAAAT---------------------------
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--------------ACTACAAGATAAAAAACAGATTCTGAGTTCACATAAATTCATCATTGTAATTTGTTGATATATTCA
AAATAGAGAGCTTGTAGGAATAAACGGAACATAGAATAGTGTGTTAA-AGAAAATCACAAGGCAGATGTAATTTGTGATA
CTTCGTTGCAATGAATGTTCAAATAATATTTTTATCATGATCTAACTTGAAAAAAAATCAACGGTCTGAACTTAAAATCT
AAGCCCTAATCTATCCATCCCTAGATGTGGATAGGCACATCAGTTAGCAATCTTACCTAATCTGATT
>chr3A_1558
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GCAGTGGCGGAGCCAGAACTTTTCTAGAGCCTGGGCAAGCTTGAGCCTATGTGTCTAATGTCGAAACTAAAATGTGATGT
T---CTGATAGATA--CAACATATAAAATAGCCCCGAACTTCGTTACCAGAAATCCACATTAATAACAAAAAAA-CGAAT
TTAAAAACAAGGTCATAAAAATATAGTTTCAAAGTGGACTAATATGTAACATATCGATATTCAGTTTCATAGACCAAAAT
GAATTTGAGACTTGACAATGAAAGTCATAGAAGCAGGCCAG-----------------CGGACATGGAGTATTTGATCCC
GAGCTCACATGCTCCCGCATGAACAATACAATCCA--------------AAAAA-TAGTAAATTTTTTTCAAAAAATCTG
A--T-TTTTTTGTGATGAACATTGATGAATTTTCTAACTGCGTGCAAAATTTCAGGTTGA-----CATTCGTGGAGGTCT
AGGTAAAAATA-TTAAAATCGATGGTCCAAA-------------------------------------------------
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------------AAGACTATTGTTGGAAGCATTTTGGAGCATCAATTTTGTTATTTTTTGCCCAGACCTCCACGAATGTC
ATTTCAACCTAAAACTTTGCACGCAGTTAGAATATTCATCA-TGTTCATCACAAAAAAA-TCAGA-TTTTTTTTAAACTT
TTACTTTTTTTTTGAATTTTACTGTTCATGCGGGAGC-TATGAGCTCAGGATCAAAAGAGCACTTTCGCAAACTAACCTC
ATTCCACGCAAAAGTATAGCTATCCAAATTACCATCCAAATGTCCTAAAAAAATATTACTCTCTCTGTAAAGGAATATAA
GAATA---------------------------------------------------------------------------
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------------------------------------------TTTAGATCACTACTTTAGTAATCCAAACGCTCTTATAT
TTCTTTACGGAGGGAGTACAATATAAAAAACAGATTCGGAGTTCACATAAATTC--------------------------
------AGAGCTTGTAGGAATAAATGGAACATAGAATAGTGTGTTAA-AGAAAAGCACGAGGCAGATGTAATTTGTGATA
CTTGGTTGCGATGAATGTTCGAATACTATTTTTATCATGATATAAATT---------TCAACAGGTTGACCTACAT----
------------------------GTGTGGATAGGCACATCAGTTAGCAATCTTACTTAATCTGATT
>chr3A_1558
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GCAGTGGCGGAGCCAGAACTTTTCTGGAGCCTGGGCAAGCTTGAGTCTAAGTATCTAATGTCGAAATTAGAATGTGATGT
T---CTGATAGATA--CAACATATAAAATAGCCCCAAACTTCCTTACCAGAAATCCACATTAATAACAAAAGAAACGAAT
TTGAAAATAAGGTCATAAAAATGTAGTTTCAAAGTGGACTAATATGTAACAT-TCGATATTGAGTTTCATAGACCAAAAT
GAATTTGAGACTTGACAATGAAAGTCATAGAAGCAGGCCATGCATGGAACCGAACTAACGGACATGGAGTATTTGGTCCC
GAGCTCACATGCTCCCGCATGAATAGTACAATCCA--------------AAAAA-TAGTAATTTTTTTTAAAAAAATCTG
A--T-TTTT------------TTGATGAATTTTCTAACTGCGTGCAAAATTTCAGGTTGAAATGACATTCATGGAGGTCT
-GGGTAAAAAA-TTAAAATCGATCATCCAAA-------------------------------------------------
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------------AAGACTATTGTTGGAAGCACTTTGGAGCATCGATTTTGCTATT-TTTTCCCAGACCTCCACGAATGTC
ATTTCAACTTGAAACTTTGCACGCATTTAGAATATTCATCAATTTTCATCACAAAAAAA---CAG-ATATTTTTGAATTT
TTACTATTTTTTTGGATTTTACTGTTCATGAGG-----------------------------------------------
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>chr1A_1559
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-CAGTGGCGGAGCCAGAACTTTTCTAAAGCCTGG-CAAGCTTGAGCCTATGTGTCTAATGTTGAAATTAAAATGTGATGT
T---CTGATAGATA--CAACATATAAAATAGCCCCGAACTTCGTTACCAGAAATCCACATTAATAACAAAAAAA-CGAAT
TTAAAAACAAGGTCATAAAAATATAGTTTCAAAGTGGACTAATATGTAACATATCGATATTCAGTTTCATAGACCAAAAT
GAATTTGAGACTTGACAATGAAAGTCATAGAAGCAGGCCAG-----------------CGGACATGGAGTATTTGATCCC
GAGCTCACATGCTCCCGCATGAACAGTACAATCCA--------------AAAAAATAGTAAATTTT-TTCAAAAGATCTG
A--T-TTTTTTGTGATGAACATTGATGAATTTTCTAACTGCGTGCAAAATTTCAGGTTGA-----CATTCATGGAGGTCT
-GGTAAAAATA-TTAAAATCGATGGTACAAA-------------------------------------------------
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------------AAGACTATTGTTGGAAGCATTTTGGAGCATCGATTTTGTTATT-TTTGCCCAGACCTCCACGAATGTC
ATTTCAACCTAAAACTTTGCACGCAGTTAGAATATTCATCA-TGTTCATCACAAAAAAAATCAGA-ATTTTTTTAAACTT
TTACTATTTTTTTGAATTTTACTGTTCATGCGGGAGC-TATGAGCTCGGGATCAAAAGAGCACTTTCGCAAACTAACCTC
ATTCCACGCAAAAGTATAGCTATCCAAATTACCATCCAAATGTCCTAAAAAAATATTACTCTCTCTGTAAAGAAATATAA
GAATA---------------------------------------------------------------------------
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------------------------------------------TTTAGATCACTACTTTAGTAATCCAAACGCTCTTATAT
TTCTTTACGGACGGAGTACAATATAAAAAACAGATTCGGAGTTCACAAAAATTC--------------------------
------AGAGCTTGTAGGAATAAATGGAACATAGAATAGTGTGTTAA-AGAAAATCACGAGGCAGATGTAATATGTGATA
CTTGGTTGCGATGAATGTTCGAATACTATTTTTATCATGATCTAGCTTGAATAAATCTCAACAGGTTGACCTACAT----
------------------------GTGTGGATAGGCACATCAGTTAGCAATCTTACTTAATCTGATT
>chr5D_1559
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-CAGTGGCGGAGCCAGATCTTTTCTGGAGCCTGGGCAAGCTTGAGCCTAAGTGTCTAATGTCGAAATAAAAATGTGATGT
T---CTGATAGATA--CAACATATAAAATAGCCCCAAACTTCCTTACCAGAAATCCACATTAATAACAAAAAAAA-----
TTAAAAACAAGGTCATAAAAATGTAGTTTGAAAGTGGACTAATATGTAACATATCGATATTCAGTTTCATAGACCAAAAT
GAATTTGAGACTTGACAATGAAAGTCATAGAAGCAGGCCATGCATGGAACCGAACTAACGGACATGGAGTATTTGATCCC
GAGCTCACATGCTCCTGCATGAACAGTACAATCCA--------------AGAAAAA----------TTCAAAAAAATCTG
TTTT-TTTTTTGTGATGAACATTGATGAATTTTCTAACTGCGTGCAAAATTTCAGGTTGAAATGACATTCGTGGAGGTCT
-GGGTAAAAAAATTAAAATCGATGGTCCAAA-------------------------------------------------
--------------------------------------------------------------------------------
------------AAGACTATTGTTGGAAGCATTTTGGAGCATCGATTTTGGTATT-TTTGTCCAGACCTCCACGAATGTC
ATTTTAACCTGAAACTTTGCACGCAGTTAGAATATTCATTAATGTTCATGACCAAAAAAGTC--A-GATTTTTTGAATTT
TTACTATGTTTTTGGATTTTACTGTGCATGCGGGAGCATATGAGCTCAGGATCAAAAGAGCACTTTCGCAAACTAACCTC
GTTCCAAGCAAAAGTATAGCTATCCAAATTACCATCCAAATGTCCTAAAAAAATACTACTCCCTCTGTAAAGAAATATAA
GAGTGTTACCGAAAAAGGCTTTCGCCCCGCTTTATAGATAAAGCAAACCGCCCGAGCCAAACAGCCAACAGAGTTCACAC
ACACACACACAAACACTCAAAGCCACAGCCGCACACACCGCACGGTACCAGTAGGGTTAATGCTGAGGGCACAGCTCAAC
AAGCCCTAAGAACAAAAGGACACACACAAAGACCGCCACGGACGAGTCCAGCCTAATCAGGCTCCGGCGGCGGTGGCGGA
AGTGGGGGTGCCATGCGGAAGGCCATCGATCGAAGGTCGGTGACGAGGGTGTCGATGACGCTCCGGTCCTGGGGGCGCCT
AAGCGGCCGCCAAAGCTGCAAATAGCCACACATTTTGAAGATCACGTCAGTCGCACGTCGCAGAGGCACTTTCTGAATAA
CGAGCTCGTTGCGAATATTCCAAAGCGTCCATGCTAGGATCCCAATGCACAGCCATCTAATATGGCGGTAACGCGGGGAG
GAGGCATGGATCTCCGCGAGTAGGTCAGGGAAGTTGGTATTGCACCACTGTCCACCGACCGTTTCACGGAAGCACGACCA
CAGGAACTGGGCAGTGGAGCAGTTGAAGAAAATGTGGTTCGAATCCTCCACCGTGGCGCACAGGGGACACATCCCGTCCC
CAGGGCCATTGCGCTTGCGGACTTCCACCCCAGAGGGGAGACGTCCCCGGATCCACTGCCAGAGGAATATCCGGATCTTG
AGGGGGAGACGAATGTCCCAGATCAGGCTAAAGGGCTCAGGGGCCAACGAAGGGGCGATGGCAGCATACAAAGACTTCGT
GGAGAAGCTTCCCGAGGGCTCCAGGCGCCACGCCATGGAGTCGGCGGCGCCCTCTACATCCATTGGCAAGAGAGCGATGT
CCTGTAGAAGGGCGTCCCACGCGTCAACCTCCTGGGGGCCAAAGGAGCGCCGAAAGGCGAGGCCCCTAGGTCAATAAGGG
CCGTCTCGACGGAAATTCGGGGGTCTGCCGCAATGGCAAATAAGCCCGGGAAGCGGGCGGCCAGAGGGGAATCCCCAAGC
CAGCGGTCGAACCAAAACAGGGTCGAGGACCGGGAACCCACCGAGATGGAAGTGCCAATCCGGAGCACGGGGAGGAGCTG
AATCACAGCCTGCCAGAACTGGGATCCCCTAGAGCGCTGGCAGAAAGCAAGAGGTTGTCCTCGGAGGTACTTATTTTGAA
TGATGGTAAGCCAGAGGCCGCCCTCCCCGTTGGCGATACGCCATAGCCATCGGGTCAGGAGAGCAATGTTCATGCGACGG
GAGGACAAGATCCCCAGACTTCCCTGGTCCTTGGGTTTGCAAATGTCCGGCCAGCTCACCATGTGGTATTTTTGCTTGTC
CCCCTCGCCAGCCCAGAAAAATCTGGACTGATATTTGGCCACCTCCTGGTGAAGCGTCTCATGGAGTCTATAGAAGCTCA
TGAGGAACCAGAGGAGGCTAGCCAGCGAGGAGTTGATGAGGATTACCCGAGCCGCCTTCGAGAGCCACCGGCCCTTCCAG
GGCTCGACCCGGTGTTGCATCCGGGTCACGGAAGGGCGGAGGTCCGCTATGGTGAGGCGCGAGTCACTAATGGGGATCCC
CAGATAGGTCGTGGGGAAAGAACCCAGGCGGCAATTAAGCCGGTCCGCAATGCCCTGGGCCTCCACTGGTGGGTATCCCA
GCACCATCACTTCACTCTTATCGAAGTTGATGGTCAGACCGGACATCTGTTGGAAGCAGAGGAGGAGGAACTTCAGGTTG
GTAATATCGGACGCGGAGCCCTCAACCATTGTTATGGTGTCGTCAGCATATTGTAGGAGGGATACCCCACCCCCTCCTAC
AAGGTGTGGGACCACGCCGTGAATGTGACCGGCCGATTTGGCTTTGTCAAGAATGGCCGCAAGGGCGTCCACCACCATGT
TAAACAGGAACGGCGAGAAAGGGTCGCCTTGGCGAACCCCACAGAGCGTGGGGAAGAAGGGGCCGATCTCACCGTTAATG
TTAATAGCGGTCCGACCGCAGGAGACAAGCTGCATAACTCTGGTCACCCAACGGTCATCAAAGCCCTTACGGAGTAAAAC
TTCCCGAAGGAAGGGCCAGTGTACAGTGTCATAGGCTTTATGGAAATCGAGCTTCAGGAATACCGCCCGTTGGTGCTTGG
AGCGGACTTCGTGAAGGACCTCGTGGAAGACCAACACCCCATCCAGGATAAAACGGCCCTGAATGAAAGCCCACTGGTTG
GGGTGAGTGATCGAGTCGGCGAGCCGGGTCACCCTACTGGCGTACCCTTTGGCCAGGATCCGAAAAATCACACTGATCAC
AGTGATGGGCCGGAATTGGCGGATGTCCGTCGCACCCAGAACTTTGGGGATAAGAGTGACTACCCCATAGTTCAGGCGCC
CAAGATCCATGGTCCCTAAGAAAAACTCGTCAAAGAGAGCCATGATCTCAGGTTTGATGGTCTGCCAGAATGCTTTAAAA
AAGGAGACTGGCAGTCCATCCGGCCCCGGCGCCGAGGAGGCGTTCATGCCCTTAATCGCCGCGAGGACTTCCTCCTCGGA
GAACGGGGCAACTAAGGCGGCATTGTCCGCAACAGACACAAGCTGGGCGCCCGACCAGATGTCGGGCGCCAGAGCGATCC
CACCCCAAGGGGTGGGGGAGAATAGGGCTTTATAGAAGCCATCTACATGCGTCCGGATGTCCAAGGGGCGGACGAGCTGG
GAATCACCATCCCACAAACAGTGGATGGAGTTCCGACGTCGCCGCCCATTCGCGATCGCCTAGAAATATGCCGTATTAGC
ATCGCCCCGCAGCACCCAACGCTGGGTACCGTAGAGCCTCCAGTAAGCTTCTTCATCCGTGTAGATGGTGGCGAGCTGAT
CCTCGAGATCATATCGCACCATCCACTCATCCGGGGAGATCCCGGAGGTGTCCGCGCGGTAGTCCAAGGCCTGGATGGCT
GAAAGGAGGACTTTTTTCCGTTCGCGGAGGTATATAAGAGTGTTTAGATCACTACTTTAGTAATTCAAACGCTTTAATAT
TTCTTTACGGAGGGAGTACAATATAAAAAACAGATTCGGAGTTCACATAAATTC--------------------------
------AGAGCTTGTAGGAATAAATGGAACATAGAATAGTGTGTTAA-AGAAAATCACGAGGCAGATGTAATTTGTGATA
CTTCGTTGCGATGAACGTTGGAATAATATTTTTATCATGATCTAGCTTGAATAAATTTCAACGGGTTGACCT--------
-------------------------------------------------------------------
>chr2D_1559
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-CAGTGGCGGAGCCAGAACTTTTCTAGAGCCTGGGCAAGCTTGAGCCTAAGTGTCTAATGTCGAAATTAAAATGTGATGG
T---CTGATAGATA--CAACATATAAAATAGCCCCAAACTTCCTTACCAGAAATCCACATTAATAA--------------
---AAAACAATGTCATAAAAATGTAGTTTCAAAGTGGACTAATATGTAACATATCGATATTCAGTTTCATAGACCAAAAT
GAATTTGAGACTTGACAATGAAAGTCATAGAAGCAGGCCATGCATGGAACCAAACTAACGGACATGGAGTATTTGATCCC
GAGCTCACATGCTCCCGCATGAACAGTATACAATCCAAAAAAATAGTAAAAAAAAA------------TCAAAAAAACTG
A--TTTTTTTT---ATGAACATTGATGAATTTTCTAACTGTGTGCAAAATTACAGGTGGAAATGACATTCGTGGAGGTCT
-GGGTAAAAAAT-TAAAATCGATGGTCCAAAAAAGGAAAAGTATTTTGTTTCCGTTCACCCTACAGTGGCATATGAAATG
GACGAAAAAAATACTAAAACTTCTTAAAGATAAAGTTAGCTTGATATGCTTAACTATAGGATATTAAAAAATAAAATTAT
AGAATTTATTGGAAGACTATTGTTGGAAGCATTTTGGAGCATCGATTTTGTTATT-TTTGTCCAGACCTCCACGAATGTC
ATTTCAACCTGAAACTTTGCACGTAGTTAGAATATTCATCAATGTTCATCACAAAAAAAAATCAG-ATTTTTTGAA----
-------TTTTTTGAATTTTACTGTTCATACGGGAGCATATAAGCTCGGGATCAAAAGAGCCCTTTCGCAAACTATCCTC
GTTCCAAGCAAAAGTATAGCTATCCAAATTACCATCCAAATGTCCTAAAAAAT---------------------------
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--------------AGTACACTATAAAAAACAGATTCGGAGTTCACATAAATTC--------------------------
------AAAGCTTGTAGGAATAAATGGAACATAGAATAGTGTGTTAA-AGAAAATCACGAGGCAGATGTAATTTGTGATA
CTTCGTTGCGATGAATGTTCGAATAATATTTTTATCATGATCTAGCTTGAATAAATTTCAACGGGTTGACCT--------
-------------------------------------------------------------------
>chr3A_1848
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--------------------------------------------------------------------------GATACC
GAGCTCACATGCTCCTACATGAACAGTACAATCCC--------------AAAAAAA------------TAAAAAATTCTG
A--TATTTTTTGTGATGAACATTGATGAATGTTCTAACTGCGTGCAAAATTTCATGTTAAAATGACATTCATGGAGGTCT
-AGGCAAAAAAA-TAAAATAGATGGTCCAAA-------------------------------------------------
--------------------------------------------------------------------------------
------------AAGACTATTGTTGGAAGCATTTTGGAGCATCGATTTTGTTATT-TTTGCCCAGACATCCACGAATGTC
--TTAAACCTGAAATTTTGCACGCTCTTAGAACATTCATCAATGTTCATCACAAAAAAAATC--A-TT-TTTTTAATTTT
TTAGTATTTTTTTGGATTTTATTGTTCATGCGGGAGCATATGAGCCTT-GATCAAAAGAGCACTTTCGCAAACTAACCTC
GTTCCAAGCAAAAGTATAGCTATCCAAATTACCATCCAAATGTCCTAAAAAATACTAC----------------------
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--------------AGTACAACATAAAAAACAGATTCGGACTTCACATAAATTC--------------------------
------AAAGCTTGTAGGAATAAATGGAACATAGAATAGTGTGTTAA-AGAAAATCACGAGGCAGATGTAATTTGTGATA
CTTCGTTGTGATGAATGTTTGAATAATATTTTTATCATGATCTAGCTTGGATAAATTTCAACGGGTTGACCT--------
-------------------------------------------------------------------
>chr3A_1848
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--------------------------------------------------------------------------GATACC
GAGCTCACATGCTCCTACATGAACAGTACAATCCC--------------AAAAAAA------------TAAACAATTCTG
A--TATTTTTTGTGATGAACATTGATGAATGTTCTAACTGCGTGCAAAATTTCATGTTGAAATGACATTCATGGAGGTCT
-AGGCAAAAAAA-TAAAATAGATGGTCCAAA-------------------------------------------------
--------------------------------------------------------------------------------
------------AAGACTATTGTTGGAAGCATTTTGGAGCATCGGTTTTGTTATT-TTTGCCCAGACATCCACGAATGTC
--TTAAACCTGAAATTTTGCACGCACTTAGAACATTCATCAATGTTCATCACAAAAAAAATC--A-TTTTTTTTAATTTT
TTAGTATATTTTTGGATTTTATTGTTCATGCGGGAGCATATGAGCCTT-GATCAAAAGAGCACTTTCGCAAACTAACCTC
GTTCCAAGCAAAAGTATAGCTATCCAAATTAACATCCAAATGTCCTAAAAAATACTAC----------------------
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--------------AGTACAACATAAAAAACAGATTCGGACTTCACATAAATTC--------------------------
------AAAGCTTGTAGGAATAAATGGAACATAGAATAGTGTGTTAA-AGAAAATCACGAGGCCGATGTAATTTGTGATA
CTTCGTTGTGATGAATGTTTGAATAATATTTTTATCATGATCTAGCTTGGATAAATTTCAACGGGTTGACCTTACA----
-------------------------------------------------------------------
>SNPs
-------------------------------------------------S--------------------S---------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S---------------------------S---S---
-----S----------S-S-----SSS-SSS---------------------------------S---------------
-S--S--S-----------------------------------------------S------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
----------------------S---------------------------------------------------------
--------------S---S-------------------------------------S--------------------S--
------------S--SSS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
S--S----S---SSSSSSSS-S--S-SS-----------------S-------------------S-S------------
---S---------------------------------------SSSSS-SS-SS-S------------------------
------------------------------------------------------S-------------S-----------
-SSS----------------------------------------------------------------------------
-------------S--S--------------------------------------------S--------S---------
------------------------------------------------------S-------------------------
-----S--------------------------------------------------------------S-----------
----------------------------------------S-----------S----------S-----S----------
---S-SS-S-------------------------------------------------S---------------------
------------------------------SS-------------S-S---S-------------------S--------
-----S--------------------------------------------------------------------------
-------------------------------------------------------SSS-S---S----------------
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---------------------------S----------------------------------------------------
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--------------S-----------------------------------------------------------------
-----------------------------------------------------------------S--------------
-------------------------------S------------------------------------------------
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S-------------------------------------------------------------------------------
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>forward_835
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---------------GTTCGGCACTGATTCTTGCG---------------------------------------------
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>reverse_5841
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ATTGGTTGCGATGAATGTTCGA----------------------------------------------------------
-------------------------------------------------------------------
