>input_sequence_74007
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-----------------------------------------------------------ATGGACAACGACGCCGGCATG
ATCCCCTCCTCGCCCTCCGCCGAGTCGTCGTCCTCTTCCTCCGACATCGACACCGAGGTGCGCACGCGCTGAGTCAATCT
TGTTGGTGTTCA--------TGCTCGTGTTCCATTGACATGCGCGGTTTAATCCGTTCGGTGTAGTCCACATGCTCGTTC
TTCCGGGACCGGAGCACGACGCTGGGGACGCTCATGGGCGTGTCCCTGGCCGACGGGGAGGACCGTCCTCCGGAGACGCA
GCAGGCGGCGGACGAGCAGGAGCGGCCCCGCGCGCCGGCGCCGGGGGAGGAGGGCTGGACGTGGTGCCGGAGGTGGAGGC
CCCGGCGCGGTGCCAGCTGGTGGCGGCTGTGCAGGGACGACGTCGGCGGCACGACGTCGCTGGCCCACTTCCTGCACATG
GAGAGGCAGCTCTCCGGCGACGGCGGGGAGGTGACGGTGCCGCTGTTCGAGAACGGGAGGGTGCTGCCGTCGTCGTCCGC
GACGGCCACCGCGGTCGTGGAGGATCAGAGGGCCAAGTGGAAGCTGCGGAGGTCTGCCCAGGGGTCGTTGTCGCTGGCGA
GGCTGCCGGTGCTGCTCACCGGCATCTGCAGCGGCGGAGCTTGA------------------------------------
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>chr6A_1_TraesCS6A01G295400
TCAGCTGGCGCATGCGTCCCTCGTATTGGGTACAGCCGCTACATTAAAGTGAGCATGGGCATGCAGGTAGGTGCGCGCAT
GCAGCGAGATTTGATTGTTTTGGCAGTTAATTTGGTGCAGAAGCCGAAGTATAATGGTGCTAATTCGAGGAAATTATTAG
TTCTGCCTTGGTACCTGTAATTTGGTCTAAGGGCCCAATAAACCCGGACGGAGGGAGTATAACGGTAGCTTGTACTACCT
CCATTCTAGTTTATTGGTCCCATTGTAATCTGCACTAACATTTTATTAGTTAAATCTTTAGTTAAAATTTAGCATAAATT
ATAAAGGAGACTAATAAACCAGTACGTTGTATATCGTAACACCGTTGTAGTGTCCGCGGGTAGCTGAATGGTCAAATCGC
TGAAATGTTTTGGAAGCAGGGTTTTTTTTTGCTAATATTATCATCGAAGGGCGAAAACAGTGATTCTAGCTCTGTGAGTA
AACTGTAGCTCTTTTTTTTGACAGAAGAGAGTAAACTGTAGCTCCTGGTCATATG----GATGGTCACATCCCTTTTCAG
AAACAAATATATATATTGGCTGGCCACACAGTGCCAAGTGCTCATGAACAGTAGAGTCAAAGCACGCCTCGAAAGTCGCT
TAATATAATCAGCCT---CTAAACGCCTTTGCAGGTTTTGCTTGTACCCTTCCCCACC--CACACAACAGTCAAAAGCTC
AGGGCTCGAGCATTCACTC----GTCTCACCGGTCACGGACAGGGGCCGGCCGCCGCAGGGCTCCCTTGACCCGCTGCTG
CCCTGGCGCCACTGCCACCACCTGCGTCTGCGTCTGCGTCTCGCAGCGCAT-AAAGCAGCACCGTCCCGTCCCGGCCCGC
GAATCTCTCCGCCCTCGACGCCGGAGGGGACAAATCTTGCAAGTACGCCCATCGCCCACTACAGTGTCACGCCCGCTGCC
GCAGAGCATCGCAGCGTACGTTCTCGCCGGAAGGGAAAGGAAGG-----AAGGACGCCGATGGACAACGACGCCGGCATG
ATCCCCTCCTCGCCCTCCGCCGAGTCGTCGTCCTCTTCCTCCGACATCGACACCGAGGTGCGCACGCGCTGAGTCAATCT
TGTTGGTGTTCA--------TGCTCGTGTTCCATTGACATGCGCGGTTTAATCCGTTCGGTGTAGTCCACATGCTCGTTC
TTCCGGGACCGGAGCACGACGCTGGGGACGCTCATGGGCGTGTCCCTGGCCGACGGGGAGGACCGTCCTCCGGAGACGCA
GCAGGCGGCGGACGAGCAGGAGCGGCCCCGCGCGCCGGCGCCGGGGGAGGAGGGCTGGACGTGGTGCCGGAGGTGGAGGC
CCCGGCGCGGTGCCAGCTGGTGGCGGCTGTGCAGGGACGACGTCGGCGGCACGACGTCGCTGGCCCACTTCCTGCACATG
GAGAGGCAGCTCTCCGGCGACGGCGGGGAGGTGACGGTGCCGCTGTTCGAGAACGGGAGGGTGCTGCCGTCGTCGTCCGC
GACGGCCACCGCGGTCGTGGAGGATCAGAGGGCCAAGTGGAAGCTGCGGAGGTCTGCCCAGGGGTCGTTGTCGCTGGCGA
GGCTGCCGGTGCTGCTCACCGGCATCTGCAGCGGCGGAGCTTGAG--------------TGGAACTG------TGGAAAT
GGTTTCGGCAGGGCACGCTGTTTTTTTCTTTTTCTTCTGTCAATTTTTTTTGCTCCGTTCCCCTCCTTAATTTTCACACG
CGGATGCAACTGATGAGCGATGATTGTACTGATGAATTGAATCACTACCACATCAAGTGCCATGGCGTGATCCCATTCTT
TTGTCTCGCAAGTCGCAA---------------------------------------GACATCATACAG-----------
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-----CAGCAGAATTTCATTGCATTTCCATTGCGGGATGAAAGATCCTGATGACCTGATCATGTCGTCAGTGTATCATAT
CATAAAAAAGAGGACTGCCAGGAAGCAAGAGACAAAAATGTACTCTACGCACACCAGAAAGACTCATCAAAGTGGATCCT
CGATTGGTAGCCGCCCGTGAACAGAAGCTTGCCATGTGATCTCTACGGCTGATAGTTGCCGTCATCATCTTTTTCTCTCT
ATATCTGTTCAGATGCTATAGCCGCCCGTGAACATATCTGTTCAGATGCTATACAAACGTCAGAGGAACTAGAAGCTCTG
TTTATATTCCACTTGTTAAACATTTCCTCTTTCTTTTTGAGTTGACTTACTAAACATTTTCACATTAGCTAAAGGCAGTC
GACTCGACTGCCTTTAGCTTCTGGGTCAGTCGATTTTGAGATGGACGGAGAAGTTCGTCGGAGGAAGGCTGGAGAGAAGG
AAGGGGCTTGTTGGCAGGATACCCCACCATCTATCTTACAGTGAGGGTGGGGCGGAAGAACGGCGGCGATGGTAGGGCGA
TGGTAGGGCAGTGTGACGAGGCTACGCGAGAGCACGGGTGGTGGAAGCATGCGGCTAGGCTGGCGGCGCAAGGCGGTTTG
AAGTAAAGAAGAAGACCGGCGGAAGGAAGAAGAAACAGATCCGGCCCTTGATCTTGTATCCGACAGCTGAAAAATCGACT
AGCCCAATTTTTTTTCAGGCGCCTCCCGTATAGCGAGAACCAAATATTTTTAAATAGTGCTTCTAGTTCCTTTGCTAAG
>chr6D_508
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---------------------------AGAGTAAACTGTAGCTCCTGGTCATATC----GATGGCCACATCCCCTTTCAA
AAATAAAAATATATATTGGGTGGCCACACAGTGCCAAGTGCTCAGGAACAGTAGAGTCAAAGCACGCCTCGGAAGTCGCT
TAATATAATCAGCCTACGCTAAACGCCTTTGCAGGTTTTGCTTGTACCCTTCCCCACCCACACACAACAGTCAAAAGCTC
AGGGCTCGAGCATTCACTCACTCGTCTCACCGGTCACGGACAGGGGCCGGCCGCCGCAGGGCTCCCTTGACCCGCTGCTG
CCCTGGCGCCACTGCCACCACCTG------CGTCTGCGTCTCGCAGCGCATAAAAGCAGCACCGTCCCG-----GCCCGC
GAATCTCCCCGCCCTCGACGCCGGAGGGGACAAATCTTGCAAGTACATCCATCGCCCACTACAGTGTCACGCCCACTGCC
GCAGAGCATCGCAGCGTACGTTCTCGCCGGAAGG-----GGAGGGAAGGAAGGACGCCGATGGACAACGACGCCGGCATG
ATCCCCTCCTCGCCCTCCGCCGAGTCGTCGTCCTCTTCCTCCGACATCGACACCGAGGTGCGCACGCGCTGAGTCAATCT
TGTTGGTGTTCATGCTCCGATGCTCGTGTTCCATTGACATGCGCGCTTTAATCCGTTCGGCGCAGTCCACATGCTCGTTC
TTCCGGGACCGGAGCACGACGCTGGGGACGCTCATGGGCGTGTCCTTGGCTGACGGGGAGGACCGGCCTCCGGAGACGCA
GCAGGCGGCGGGCGAGCAGGAGAGGCCCCGCGAGCCGGCGCCGGGGGAGGAGGGCTGGACGTGGCGCCGGAGGTGGAGGC
CGCGCCGCGGCGCCAGCTGGTGGCGGCTGTGCAGGGACGACGTCGGCGGCACGACGTCGCTGGCCCACTTCCTGCACATG
GAGAGGCAGCTCTCCGGCGACGGCGGGGAGGTGACGGTGCCGCTGTTCGAGAACGGGAGGGTGCTGCCGTCGTCGTCCGC
GACGGCTGCCGCGGTCGTGGAGGATCAGAGGGCCAAGTGGAAGCTGCGGAGGTCCGCCCAGGGGTCGTTGTCGCTGGCGA
GGCTGCCGGTGCTGCTCACCGGCATCTGCAGCGGCGGAGCTTGAG--------------TTCTTACCATTGACTGGAAAT
GGTTTCTGCGGGGCACGCTGTTTTTTTCTTTTTCTTCTGTCATTTTTTC-T-CTCCGTTTCCCTCCTTAACTTTCACACG
CGGATGCAATTGATGAGCGATGATTGTACTGATGAATGGAATTACTGCTACATCAAGTGCCATGGCGTGATCCCATTCTT
CTGTCTCGCAAGTCGCAA---------------------------------------GACATGTACAGGGATCAGGTGAC
ATGCACTTTTGCATGTCACCGTGTGACTTGCGGCCCAAAATCAAATTTAAACATTGCGAAAAAATCTGAAAAAAACATGT
ATGTTCACAGCACATATTAAGATAATCCCTAAAAAATTCAGATCAAAATTCAAAACATACATCAAGAAGCAAAAAAGAGA
AACTCAGATGTGAATAATATACAGAGAACCATTCACAACTATTTATGACAGATTTCTCTTTTTTGCTTCGTGATGTATGT
TTCGAATTTTGATCTGAATTTTTTAGGGATTATCTCAATATGTGTTGTGAACATGCATGATTTTTTTCAGATTTTTTCGC
AATGTTTAAATTTAAATTTGGGCCGTAAGTCACACGGTGACATGCAAAGGTGCATGTCACCTGATCCCTGTCCCAAGACA
TCATACAGCAGAATTTCATTGCATTTGCACTGCAAGATGCAAGATCCTGATGACCTGATCATGCCGTCAGTGTATCAGAT
CATAAAAAAGAGGGCTACCAGGAAGCAAGAGACAAAAAAGTACTCTACGCACACCAGAAAGACTCATCAAAGTGCATCCT
CGATCGGTAGCCACCCGTGAACAGAAGCTTGCCATGTGATCTCTACGGCTGATAGTTGCCATCATCATTTTTTTCTCTCT
AT------------------------------------------------------------------------------
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>chr6B_508
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---------------------------AGAGTAAACTGTAGCTCCTGGTCATATGGATGGATGGTCACATTCCTTTTCAA
AAATAAATATACATATTGGATGGCCACACGGTGCCAAGTGCTCAGGAACAGTAGAGTCAAAGCACGCCTCGGAAGTCGCT
TAATATAATCAGCCTACGCTAAACGCCTTTGCAGGTTTTGCTTGTACCCTTCCCCACC--CACACAACAGTCAAAAGCTC
AGGGCTCGAGCATTCACTCA----TCTCACCGGTCACGGACAGGGGCCGGCCGCCGCAGGGCTCCCTTGACCCGCTGCTG
CCCTGGCGCCACTGCCACCACCTG------CGTCTGCGTCTCGCAGCGCAT-AAAGCAGCACCGTCCCG-----GCCCGC
GAATCTCTCCGCCCTCGACGCCGGAGGGGACAAATCTTGCAAGTACGCCCATCGCCCACTACAGTGTCACGCCCGCTGCC
GCAGAGCATCGCAGCGTACGTTCTCGCCGGAAGG-----GAAGA-----AAGGACGCCGATGGACAACGACGCCGGCATG
ATCCCCTCCTCGCCCTCCGCCGAGACGTCGTCCTCTTCCTCCGACATCGACACCGAGGTGCGCACGCGCTGAGTCAATCT
TGTTGGTGTTC--------ATGCTCGTGTTCCATTGACATGCGCGGTTTAATTCGTTCGGCGCAGTCCACATGCTCCTTC
TTCCGGGACCGGAGCACGACGCTGGGGACGCTCATGGGCGTGTCCCTGGCCGACGGGGAGGACCGGCCTCCAGAGACGCA
GCAGGCGGCGGACGAGCAGGAGAGGCCCCGCGCGCCGGCGCCGGGGGAGGAGGGCTGGACGTGGCGCCGGAGGTGGAGGC
CGCGTCGCGGCGCCAGCTGGTGGCGGCTGTGCAGGGACGACGTCGGCGGCACGACGTCGCTGGCCCACTTCCTGCACATG
GAGAGGCAGCTCTCCGGCGACGGCGGGGAGGTGACGGTGCCACTGTTCGAGAACGGGAGGGTGTTGCCGTCGTCGTCCGC
GA------CCGCGGTCGTGGAGGATCAGAAGGCCAAGTGGAAGCTGCGGAGGTCCGCCCAGGGGTCGTTGTCGCTGGCGA
GGCTACCGGTGCTGCTCACCGGCATCTGCAGCGGCGGAGCTTGAGTGCTTACGGTTGAATGGAACTG------TGGAAAT
GGTTTCAGCGGGTCACGCTGTTTTTG--TTTTTCTTCTGTCATTTTTTC-TGCTCCGTTTCCCTCCTTAACTTTCACACG
CGGATGCAATTGATGAACGATGATTGTACTGATGAATGGAATCACTACCACATCAAGTGCCATGGCGTGATCCCATTCTT
CTGTATCCCAAGTCGCAAGGATGATCGAAAGAATTTCCGTTTCTTCGCTGTGACAATGACATCATACAG-----------
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-----CAGCAGAATTTCATTGCGTTTCCATTGCAAGATGCAAGATCCTGATGACCTGATCATGTCGTCAGTGTATCATAT
CATAAAAAAGAGGGCTACCAGGAAGCAAGAGACAAAAAAGTACTCTACGCACACCAGAAAGGCTCATCAAAGTGGATCCT
CGATCGGTAGCCGCCCGTGAACAGAAGCTTGCCATGTGATCTCTACGGCTGATAGTTGCGGTCATCATCTTTCTCTCTAT
ATATCTGTTCAGATGCTATAGCCACCCGTGAACATTTC------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------------S
---S---------------S------------------------S--------------------------S--------
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------------------------SSSSSS---------------------------------------SSSSS------
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----------------------------------SSSSS-----------------------------------------
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------------------------------------------------------------S-S-----------------
-----------------------------------------------------------------S--------------
----------------------S-----------------------------------------S---------------
-S--S-----S---------------------------------------------------------------------
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------SS----------------------------------------------S-------------------------
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------S--S--------------------------------S-----SS---------S----------S---------
---------S---------------------------S------------------------------------------
S-------------------------------------------------------------------------------
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---------------------------------SS----S----------------------------------------
-------------S--S---------------------S-----------------------------------------
----S---------------------------------------------------------------------------
-----------------------S-----------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_37
-----------------CCCTCGTATTGGGTACAGCC-------------------------------------------
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>reverse_2414
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-------------ACTGCCAGGAAGCAAGAGAC-----------------------------------------------
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