>input_sequence_73944
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-------------------------------------------------------ATGGAACTTCTGGATGAGGAATTGG
ATGCAGTGGTGATTAGCAAGGCTGAAGCGAAGAGATTTGAGGCGGGGGCAGGATGGATGGCAATTGCTAGGGTTAACACG
GACAGGCCGTTTAGCTCAACAGCTTTTTTTGACAACGTGAAGTTCATTTGGGGTCTGGCCCAAACACCCAAGTTCAGGGA
AGCTGGTGAGAACTTGTTTATCTTCCAGTTGTTTTGTCTTGGAGATTGGAGGAAAGTCGTGCATGGGGGACCCTGGCTGT
TCAGGGGTCTAGGGGTGATCATCGAAGATTATGATGGCAAGACCGATCCTGAAAAGGTCACACTAGACGGTCTGTATGTG
TGGGCTCAAATTCATAAGGTCCCTGACATTTATCGACAGGAGCCAGCAGTAGATCAACTTGCTCGTAGAATAGGCAAAGT
CAGAGAGGTTCAGCTCCGTCCTAACCTCTACTATGAGGGCGACTACGTCCGGGTGAGGGCAAAGGTTTTGACTGCGGAAC
CTCTTACTCGCTTTACTCCGCTGACGATCGAGGGAGAGGGCACACGTATGCTGGTGGTGAAGTATGAAAAAAATCCCTTT
CTTCTATCAGATTTGTGGGTACATGGGACATAG-----------------------------------------------
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>chr3B_1_TraesCS3B01G557400
CATGACAAAGTGAGTCTGAA-CCCGCCCAATCCTTGAAACGTATCATAGAAGCTCTAATGCCGTCAGAACTCCCAGTGGA
ACATACCAGGATCTTGCCTGGTTACGATTGGAGACCGCCTGAATCAGAATGTATAAAAAATCAACACGGATGCA------
--AGTGTCCCGTTGACTGAAAACAGAAATGGAGCAGGTGGTCTAGCAAGAACTCCCACCGTCTTTGTTCCTGCATG----
--GCCGCATCACAATGTCATGGATCCACTTACTGCAGAAGCTTTGGCTCTGCGAGATGGAGAAATCTTTGGCAAGCTTCG
AGATTTTCTGTGAGTGGTCTTCGAAGTTGACTGCTTGGAGTTGGTACAACTCTGGAACTCGCGACAATTCTCGCGCTCTG
TAATAGTGCCTATTCTTCTCGAAATTGAAGGGCTAGCCTCAACTTTCCTAAGTTTTAATGTTCAGCATGTAATGAGACAA
GCCAACAACTCAACTCATGTGTGTGCGAAGCATGCAAGCACACTGGGTGTGACTGATTGCTGGATGAACTCCCCTCACGG
ATTTCTTGTGACAAGCATGTTGGCTGATCGCGCTGGAGTTGGAAATAATTGAATAAAACTCTATGATTCCTGCAAAAAAA
GATTGCGACCTCCATGTAGCTCAGACGCTGCTTCGGACCCTTAACTACACATGCCTTTGTGTCAGGGACATGTGGGCCAG
CTGACTGTTGGACCCACTTATCAGTGGCCCAAAGGCACCTGCAGTTAAGGCACGGAAGCTCAGTCCATGTAGCTCGGCCA
CACTCGCTTAGGGTTATCAGCGGTGCCGCTGGCGACTTTTTGGCCGCCGGTGGGATCGCTGTTTTCTGATCATTACCGAA
CCACGACTCTCTAGGGGGTCACGGGGGGAGTCACAGGAACGACCGCGAGGCGAGGATCCAACCATGGCGGAAAAGGGTTC
TTCCTCGAAGGTGGGGCAAACAACTGAGATTGATCTGGAGGAGATGCTAAAAGGCATGGAACTTCTGGATGAGGAATTGG
ATGCAGTGGTGATTAGCAAGGCTGAAGCGAAGAGATTTGAGGCGGGGGCAGGATGGATGGCAATTGCTAGGGTTAACACG
GACAGGCCGTTTAGCTCAACAGCTTTTTTTGACAACGTGAAGTTCATTTGGGGTCTGGCCCAAACACCCAAGTTCAGGGA
AGCTGGTGAGAACTTGTTTATCTTCCAGTTGTTTTGTCTTGGAGATTGGAGGAAAGTCGTGCATGGGGGACCCTGGCTGT
TCAGGGGTCTAGGGGTGATCATCGAAGATTATGATGGCAAGACCGATCCTGAAAAGGTCACACTAGACGGTCTGTATGTG
TGGGCTCAAATTCATAAGGTCCCTGACATTTATCGACAGGAGCCAGCAGTAGATCAACTTGCTCGTAGAATAGGCAAAGT
CAGAGAGGTTCAGCTCCGTCCTAACCTCTACTATGAGGGCGACTACGTCCGGGTGAGGGCAAAGGTTTTGACTGCGGAAC
CTCTTACTCGCTTTACTCCGCTGACGATCGAGGGAGAGGGCACACGTATGCTGGTGGTGAAGTATGAAAAAAATCCCTTT
CTTCTATCAGATTTGTGGGTACATGGGACATAGTTATGAAGAGTATGGAAAGGGAGTATGGAAGGAGGAGGACAAAAAAT
GGGGCCGATGGATGATTGCCAAGTGTCAAACGGTGGAATATTCGCAGCCCATGGGAGGACGATATGGTGCTAGAGGAGGA
AGGGGACGAGGCCGAGGCCGAGGCCGAGGCCATGGTTCCGACCAAACTCAAGGACGAGGTTTTGGGGAAACAACGGGGAA
TATGGTTGCGGACAGGAACACAAAGGATGTAAAAGGCAAAGGACAAGAGTCAGATGTTAATGGTGATCGGGACGCAGTGA
AAGCG-CAGGATGATAAGCAGCAAGGGGTAGCCGAGGAGATCAGTACCAATAACAAAAGGTTTTCTGCAGATAACACGCA
GGTTGATCTGGGAGCGACTGTCGTACACACAAACTCAGATCAGAACTTTCAGAAGGGTGTTATGGTCACGACAGGGAATC
AGCCAGAAGGGATGCCTCCACTACCGCCGGTGTATGTGTCCCTGTGGAAGATAAACAAATGCCTAAAGAAGGGAGTTGAC
CAGGGGGA-AATTAGGTAGAGGCTGCGGCAACGGAAGCAAAAAACACATTATCGGCGGGCTCCCAGGTGGAGCACCGCTG
AGCGCAATGA------------------------GCGCGGGTAAAGCCTCGACAATTCGCGAACTTCACGAGCTCGTGAA
GGAATTTACGCCCACCATACTTTGTATCGTAGAAACTCAAGTGGAAAGAAGTAGGGTGGAAGGTTTAGCAATTTCAATAG
GTTTTGACAATTGTTATGCTTTAAGTAGTACTGGTAGAAGTGGTGGTATTGGAAT-TTCTGGAATAATTCAATAAAGATT
GATATTGTTGGTTACTCTGTTTATCATGTGGATTGTGAAGTAAGGGACCCGGGATTTGATCCTTGGAGGATGACAGTGGT
GTACGGAGAGGCTCAGACACACTTGCGACATCAAACCTGGGACACTATGGAAAATATATCAAGTTTGAACAACTTACCGT
GGCTGTGTATTAGAGACTTC
>chr6D_1
CATGACAGAGAGAGTCTGAATCCCGGCCAGTCCTTGAAGCGAATCAGAGAAGCTCTAATGCTGTTAGAGCTCCTGGTTGA
ACATACTAGGATTCTGCCTGGTTATGGTTGGAGACAGCCTGACCCAGAATGGATAAAAA-TAAACACGGATGCA------
--AGCATCTCGCTGACTGAAAACAGAAGTGGAGCGGGTGGTCTAGCAAGAACTCCCTCCGCCTTTGTTGCTGCCTGGAGT
AAGCTGCATCATAATGTCACGGATCCGCTTATTGCAGAAGCTCTGGCTCTTCAAGGCGGAGTAATTTTCGGCAAATTTCG
GGGTTTTCCGCGAGTGGTGTTTGAAGTAGATTGCTTGGAGTTGGTACAACTCTGGAACTCGCGACAATTTTCGCGCTCTG
TTATAGCGCCTATTCTTCTCGAAATTGAAGGGCTAGCCTCAACTTTTCTTAGTTTTGATGTTCAACATGTAATGAGACAA
GCCAACAATTCAGCGCACCTATGTGCAAAGCATGCAAGCACACTGGGCGTGACTGATTGCTGGATGAACTCTCCTCCCGG
TTTCCTCATGACGAGCCTGCTGGCTGATCGCGCTGGAGCTGGAAATGATTGAATAAAGCTCTATGATTCCCGCAAAAAAA
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>chr2D_1
CATGACAAAGAGAGTCTGAATCCAGGCCAGTCCTTGAAGCGGATCAGAGAAGCTCTAATGCTGCTAGAGCTTCCAGATGA
ACATACCAGGATCATGCCTGGTTATGGTTGGAGACCGCCAGACCAAGAGTGGCTAAAGA-TAAATACGGACGCT------
--AGCGTCTCGCTGACTGAAAACAGAAGTGGAGCGGG-GGTCTTGCAAAAACCTCATCCGCCTTTGTTGCTGCCTGGAGC
AAGCCGCCTCATAATGTCACGGATCCGCTCATCGCAGAAGCCCTGGCTCTACGAGACGGAGTTATTTTCGGCAAGCTTCG
AGGTTATCCGCGAGTGGTGTTTGAAGTAGACTGTCTGGAGTTGGTACAACTCTGGAACTCGTAACAATTTTCGCGCTCTG
TTATAGCGCCTATTCTTCTCGAAATTGAAGGGCTAGCCTCAACTTTTCTTAGTTTTGATGTTCATCATGTATTGAGACAA
GCCAACAATTCAGCGCACCTGTGTGCAAAGCATGCAAGCACACTGGGAGTGACTGATTGTTGGATGAACTCTTCTCCCGG
CTTCCTAGTGACGAGCCTGATGGCTGATCACGCTGGAGCCGGAATTGATTGAATAAAGCTCTATGTTTCCCGCAAAAAAA
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>chr2A_1
CATGACAAAGAGAGTCCGAATCCAGGCCAGTCCTTGAAGCGGATCAGAGAAGCTCTAATGCTGCTAGAGCTTCCAGATGA
ACATACCAGGATCATGCCTGGTTATGGTTGGAGACCGCCAGACTAAGAGTGGCTAAAGA-TAAATACGGACGCT------
--AGCGTCTCGCTGACTGAAAACAGAAGTGGAGCGGG-GGTCTTGCAAAAACCTCATCCGCCTTTGTTGCTGCCTGGAGC
AAGCCGCATCATAATGTCACGGATCCGCTCATAGCAGAAGCCCTGGCTCTACGAGACGGAGTTATTTTCGGCAAGCTTCG
AGGTTATCCGCGAGTGGTGTTTGAAGTAGACTGTCTGGAGTTGGTGCAGCTCTGGAACTCGCAACAATTTTCGCGCTCTG
TTATAGCGCCTATTCTTCTCGAAATTGAAGGGCTAGCCTCAACTTTTCTTAGTTTTGATGTTCATCATGTATTGAGACAA
GCCAACAATTCAGCGCACCTGTGTGCAAAGCATGCAAGCA-ACTAGGAGTGACTGATTGTTGGATGAACTCTTCTCTCGG
CTTCCTAGTGACGAGCTTGATGGCTGATCACGCTGGAGCAGGAATTGATTGAATAAAGCTCTATGTTTCCCGCAAAAAAA
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>chr3D_2
-ATGACAGAGAGAGTCTGAATCCCGGCCAGTCCTTGAAGCGAATCAGAGAAGCTCTAATGCTGTTAGAGCTCCCAGTTGA
ACATACCAGGATTTTGCCTAGTTATGGTTGGAGACCACCTGACCCAGAATGGATAAAAA-TATACATGGATGCAAGCCAG
CAAGCGTCTCGCTGACTGAAAACAGAAGTGGAGCGGGCGGTCTAGCAAGAACTCCCTCCGCCTTTGTTGCTGCCTGGAGT
AAGCCGCACCATAATGTCACGAATCCGCTTATTGCAGAAGCTCTGGCTCTACAAGACGGAGTAATTTTTGGCAAACTTCG
GGGTTTTCCACGAGTGGTGTTTGAAGTAGATTGCTTGGAGTTGGTACAACTCTGGAACTCGCGACAATTTTCACGCTCTG
TTATAGCGCCTATTCTTCTCGAAATTGAAGGGCTAGCCTCAACTTTTCTTAGTTTTGATGTTCAACATGTAATGAGACAA
GCCAACAATTCAGCGCACCTATGTGCAAAGCATGCAAGCACACTGGGAGTGACTGATTGCTGGATGAACTCTCCTCCCGG
TTTCCTCGTGACGAGCCTGTTGGCTGATCGCGCTGGAGCTGGAAATGATTGAATAAAGCTCTATGATTCCCGCAAAAAAA
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>chr4A_76
----------------------------------------------------------------------------TGGA
ACATACCAGGATCTTGCCTGGTTATGGTTGGAGACCGCCTGATCCAGAATGCATAAAAA-TCAACATAAATGCAAG----
----TGTCTCCTCGGCTGAAAATAGAAGTGGAGCGGGTGGTCTAGCAAGAAGTCCTTCCGTCTTCGTCGTTGCCTGGAGC
AAGCCGCATAATAATGTCACGGATGCACTTATTGCAGAAGCTTTGGCTCTACGAGTTGGAGTAATCTTTGGCAAACTTCG
GGGTTTTCCTCGAGTGGTATTCGA---AGACTGTTTGGAGTTGGTACAACTCTGGAACTCGCCACAATTTTCGCGCTCTA
TAATAGCGCCTATTCTTCTCGAAATTGAAGGGCTAGCCTTAACATTTCTTTATTTTGATGTTCAACATATAATGAGACCA
GCCAACAATTAAGCTCACTTGTGTGCGAAACATGCAAGCACACTGGGTGTGACAGATTGCTAGATGAACTCCCC-CTCGG
TTTCCTCGTGACAAGCATGTTGGCTGATCGCGCTGAAGTTGAGAATGATTGAATAAAGCTCTGTGATTCCCACAAAAAA-
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>chr5B_788
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--CTCGTTTAGGGTTACCGGCGGCACCGTTGGCGATTTTCCGATCGCCGGTGGGATCGCTGTCTTTTGATAATTACCGAA
CAGCGGCTCCCTAGGGGGTCACGGGGGGAGTCACAGGGACGGCCGGGAGGCGAGGATCCAACCATGGCAGAGAAGGGTTC
TTACTCAAGGATGGTGCGGGCAACTGAGATCAATCTGGAGGAGATGCTGAAAGGCATGGAGCTTCTGGATGAGGAATTGG
ATGCAGTGGTGATTGGCAAGGCTGAAGCAAAGAAATTTGAGGTGGAGGCAGGATGGATGGCGATTGCTAGGGTTAATACG
GATAGGCCGTTCAGCTCAACAACGTTTTTTGACAACATGAAGTTTATCTGGGGTCTTGCCCAAACGCCTAAGTTTCGGGA
GCCTGGTGAGAACTTGTTTATCTTCCTGTTGTTCTGTCTTGGAGATTGGAGGAAAGTCGTGCATGGGGGACCCTGGCTGT
TTAGGGGCCTTGGGGTGACCATTGAAGATTATGATAGCAAGACCGATCCTGAAAAGGTGTCACAC---------------
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>chr5B_805
GCGGC---------------------------------------------------------------------------
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------------------------GCCGCTGGCGATTTTCTGACCGCCGGTGGGATCGCTGTCATCTGATCGATACCGAA
TCGCGGCTTCCCAGGAGGCCACGAGGGGAGATACAA-------------GCGAGGACCCAGCCATGGCGGAGAAGGGCTC
TTCCTCGAAGATGAGGCAGTCAGTTAAGATCAATCTGGAGGAGATGCTTAGAGGTATGGAACTCCTGGACGAGGAATTGG
ACCCAGTAGTGATCGGGAAGGCCGAAGCGAAGAAACTCGAATCTGAGGCAGGATGGTTGGCGATTGCTAGGGTTAACACG
GACAGGCCGTTCAGCTCTACAGCATTCTTTGAAAACATGAAGTTCATCTGGGGTTTGGCCAAGACACCAAAGTACCGGGA
GGCTGGGGAGAACTTGTTTATTTTCCAATTGTTCTGTCTCGGAGATTGGAGGAAGGTCGTGCATGGAGATCCCTGGCTGT
TTAGGGGGCTTGGGGTGATCATAGAAGATTATGATGGCAAGACTGGTCCTGAAAAGGTGGAACTAGATGGTCTGTATGTG
TGGGCTCAAATCCATAAGGCTCCTGAAGTCTACCGACAGGAACGGGTAGTTGATCAGCTTGCCCGCAAGATTGGCAGAGT
CAAAGAGGTTCAACTCCGTACCAATCTCTACTATGAGGGAGACTACGTCTGGGTGAGGGCAAAAGTTTTGACTGCCAAAC
CTCTTACTCGTTTCACGCCACTGACGATCGAAGGAGAAGGCACACGTATGCTGATAGTCAAATATGAGAAAATTCCA-TT
CTTCTGTCAGATTTGTGGGTACATGGGACACAGTTATGATGAATGTGGAAAGGGAGTATGGAAGGAGGAGGATAAAAAAT
GGGGCCGATGGATGATCGCCCAGCGTCGGGAGGTGGACTATTCGCAGCCTAGGGGAGGAAGATTTGGTACCAGAGGTGGA
AGAGGACGAGGTCGAGGGGGTACT---GGCCATGGTTTTGCTCCATCTCAAGGGCAAGGCTTTGGGGCACCTACAGGGAC
TATGGCTGCGGACAGGAACACAGAGGAGGCAAAGGGCAAAGGGAAAGAGTCAGACGCTAATCGGGACCAAGAAGCAGATA
TAGT-GCAGAATGAACAGAAGCAAGGGAAAGCTCACGAGATCAATACCAGTAATAAAAGGCTTTCTGCAGATAATACGCA
GGCCGATCTTGCAGCGACTGTGGTACACATAAACTCGGAGGAGGATTCTCAGAGGGGCATCATGATCACGACAAATAAGC
AGCCAGCGGGGGTGCCTCCCCTACCGCCGGTGTATGTGTCGCCAAGGAAGACAAACAAGCGGCTTAAGAATGGGTCTGAT
CGGGGGGAGC--GAGGCATAAGCTGCGGCAAATGGATCAAAAAATGCATTATCGGCGGGCTCCCAGGTGGGGCACCGCCG
AGCGCAATGAGTATTATTAGCTGGAATTGTCGGGGCGCGGGTAAAGCCTCGACAATTCACGAACTTCGCGAGCTCGTGAA
GGAATTTACTCCCACCATACTTTGTATCGTAGAAACTCAAGTGGACAAGAGTAGGGTGGAAGTTTTAGCTAGTTCAATAG
GTTTTGACAATTGTTATGCAATGAGTAGCAGTGGTAGAATTGGTGGCATTGGAATCTTCTGGAATAATTCAATAAAAATT
GATATTGTTGGTTACTCTATGTATCACGTGGATTGTGAAGTGAGAGATCCTGGGTTTGATCCATGGAGGATGACAGTGGT
GTACGGGGAAGCTCAGACACACCTGCGCTACCAAACCTGGGACACTATGAAAAATATTTCAAGTTTGAACAACTTACCGT
GGGTGTGTATTGGAGACTTC
>chr1D_977
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-------------------------------GATCTAGAGGAGATGCTAAAGAACATGGATCTTATGGATGAAGAGCTGG
ACGATGTGGTCATCGGGAAGGAAAAGGCCCAGAAGTTTAAGGAGGAATCTCGATGGCTGGCGATTGCCAGGGTCAATACG
GATCGACCTTTTAGTTCGTCGTCCTTTTTTGACACCATGACGTTTGTCTGGGGCCTAGCGCAGACGCCAAAATTCAGAGA
GGCGGGAGCGAATAGATTCATATTCCAGATGTTTTGCTTGGGAGATTGGAAGAAAGTAGTCCATGGTGGTCCATGGCTCT
TTCGAAACTATGGGGTGGTCATTGAGGACTACGATGGGACAACGGATCTAGGGTAATTCGTGCTTGATGGCCTGTATGTG
TGGGCGCAGATCCATAAGGTTCCTGATCTTTACCGCCATCCAGAAGTTGTTGATGAGTTAGCACGAAGAATTGGCAAAGT
CAGAGAGGTTCAGCTCCGTCCTACTCTGTACTATGAGGGTGACTATGTCAGGGTTAGGGTTCGTGTTCTTACTGCGAAAC
CTCTGACCAGATTCGCTCCTCTAACTGTGGAAGGAGAAGGGAGACGAATGCTAGTGGTGAAATATGAAAAAA-TCCCTTT
CTTTTGCAAGGTTTGCGGTCTTATGGGACATGGTTTTGAGGAGTGTGGTAATGGGATTTGGAAGGAGACGGACAAGAAGT
GGGGAAGCTGGATGTTAGCCAAG---------------------------------------------------------
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>chr5B_1317
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---------------------------------------------------AAAAGGTCACACTAGACGGTCTATATGTG
TGGGCTCAAATCCATAAGGTACCTGACATTTATCGGTAGGAACCAATAGTAGATCGACTTGCTCACAGAATCGGCAAAGT
CAGAGAGGTTCAGCTCCGTCCAAACCTCTACTATGAGGGCGACTACGTCCAGGTGAGGGCAAAGGTTTTGACTGCGAAAC
CCCTTGCTCGCTTTACTTCGCTGACAATTGAGGGAGAGGGCACACATATGCTGGTGGTGAAGTATGAAAAAAATCCCTTC
CTTCTGTCAGATTTGTGGGCACATGGGACATAGTTATGAAGAGTGTGGAAAGGGAGTATGGAAGGAGGAGGACAAAAA--
-GGGCAAATGGATGATTGCCAAGCATCGAACGGTGGAATACTCACCGCCCATGGGAGGACGATTTGGTGCTAGAGGAGGA
AGGGGACGAGGT------------CGAGGCCATGGTTCCGACACTCCCCAAGGGCGGGGCTTTGGGACAACAACTAGGAA
TATGGCAGCGGACATGAATGCCAAGGATGTAAAGTGTAAAGGACACAAGTCAGATGTTAATGGTGATCAGGATGCAACGA
AAGCGGCAGGCTGAAAAGCAGCAAGGGGTAGCCGAGGAGTTCAATATTAGCAACAAAAGGTTTTCTACAGATAACACACA
GGTGGATCCGGGAGAAACTGTCATATACACAAACTCAGATCAGAATTTTCAAAAGGGCATCATGTTAACGACAGGGAATC
AGCTAGAAGGGGTGCCCCC-CTTCCACCAGCGTATGTGTCGCCGAGGAAGTTGAACAAACGTCACAAGAAGGGAGCTGAC
CAGGGGGAGAATGAGGCAGAAGTTGCAGTGAGGGAAGCAAAAAATGCATTATCGGCGGGCTCCTAGGTGGGGCACCGCCG
AGCGCAATGAGTATTATATGCTGGAATTGCCGGGGCGCAGGTAAAGCCTCAACAATTCGCAAACTTCACGAGCTCGTGAA
GGAATTTACCCACACCATACTTTGTAACGTAGAAACTCAAGTGGAAAGAAGTAGGGTGGAAGGTTTGGCAAATTCAATAG
GTTTTGGCAATTGTTATGCTTTAAGCAGTACTAGTAGAAGTGGTGGTATTGGAATTTTCTGGAATAATTCAATAAAGATT
GCTATTGTAGGTTACTCTGTGTATCATGTGGATTATGAAGTAAGGGACCCGGGTTTTGATCCATGGAGGATGACGGAGGT
GTACGGAGAGGCTCAGACACACTTGCGACATCAAACCTGGGACACTATGAAAAATATTTCAAGTTTGAACAACTTACCGT
GGCTGTGTATTGGAGACTTC
>SNPs
----------S--------------S---S--------S--S----S--------------S--S---S-----------
------------------------S-S---------------S--------S-------S--------------------
--------S------------------S------S---------------------S-----------S----S------
-----------S-------S-----------S------------------S----------S------------------
--S-----S-S-------S--------S-----------------------------------------S----------
------S---------------------------------------S--S------S-------S---------------
--------S---S----SS---------------------------------------------------------S---
S--S--S---------------------------------------S----------S------------S---------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS----S---------S-S----S-----------S---S--S-------------------S-----------------
--S--S---S---------------------------S---S---S-------------------------S--------
----------S-------SS----------S-------------------------------------------------
--------------S------------------S-----------S---------------S------------------
-----------------------S------------S----------S--------------------S-----------
S-------------------------------------------------------------------------------
-S-----S--S-----------S---------------------------------------------------------
-----------S--------S--------------------S----S------------------S-----S--------
----------------------------------------------------------------------------S---
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-----S--------------------------------------S-----------------------------------
-----------------------S---S-----------------------------------S----------------
-----------S-----SS-SSSS-------------------S-S-------S-----S-------S------S-----
-----S---------------------------S----------------------------------S---S----S--
--------------S----------------------------S-----S------------------------------
---S-----------------------------------------S-----------SS-S---S---------------
-----------S-------S--------------------S-S-S--------------S-S--S----------S----
------------S---S---S----------S------------SS------------------------S-------S-
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---------S-------------------------------------------------------------S--------
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--------------------S--------------------------------S--------S-----------------
-------------------------------------------------S-------S----------------------
-----------S--------
>forward_686
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--------------------------GCTGCTTCGGACCCTTAACT----------------------------------
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>reverse_1820
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-----------------------------------------------------------TTTTGGGGAAACAACGGGGA-
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