>input_sequence_73900
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------------------------------------------------------ATGGCGGTGCCAGCCAAGTGCCTCCT
TCTGTTCTCCCTCTCCGCGGCGCTCCTCTCTCTGCTTGGCACCGGCGCCTCCGCCATGGGCCTGCCCCAGCCTCATGTGC
CGGTGAACTTCACCATCGGCGTGCAGGGCATGGTCTGGTGCAAGACCTGCAGGTACATCGGCTACAACGCAAACATGGAC
GCCTCCCCGCTCAAAGGTCAGCCCT---AACCCCAACCTCTGCATTC-TTTAACTACGTCCGCGTCC-------------
--------CATGTGCACGCTCCTTCATTCTGGCATCGATG-AAACATATATGTTGTGTGTGTTGGTGCAT-----GTAGG
CGTGGAGGTGTACCTGCAGTGCCGGCACGGCCCGCGGCGGCTGAAGAAGTTACCAGGGACATCGGGGCAGGGCGGCTACT
TCGTCATCCAGTCGGCGCACATGGCGTCCTTCACCAACGACGAGTGCAAGGTGTACGTGGAGAGCTCGGCCTCCACCGCG
TGCGGCCTCGTCGACGAACCCGCCGCCGGCGAGGGGCTGCCACTCAAGTTCGACTCATTCGTCAAGCACGGCGACGGCCT
GCAGGCGCTCTACTCCGTCGGCAACATCTTCTTCCGCCCCAGCAACCCCAACAAGTGCTACTGA----------------
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--------------------------------------------
>chr1D_1_TraesCS1D01G354800
ACTGGAATAATACTAGACTCACGGGTTACCTCCAACGGACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACTCCCTCATTTCGTTTTATAGGCCTTAAATCTGAAAT
CTCATCTACCAAGGCAGATGATGAGTGGAGGAATATATCTACTTTACAAAACTATCCAAATTAAACTAATGCATTAATGT
GGATTAATTACACTACATGCATGCTTGGCCACTAGATGAGTATGAACATTGCATGCATTGATGAGTTTTTTTTTAATTAT
TGCATGCAAAGGTTTAATGCGCCTTGAAATCTCAATAGGAGATGGAGATGAGCCCTTTAAATTGGGAAAACGAAAAATTT
AACATAAGCTTTATAAACCGAAAAGGAGGAAGTACTTAATCAGCCCCGTAAACTCCCCGTGAACCCCCTGTGAGACGCTT
GC----TTAAGTTACCTGTAAGCAATGACAGCGCTTTGAAATTGTAAGTAGCTCGCTTGAGATGCACTCCAACAAGGCTG
CAAGCCACATGCGAGTGCACCATGCATGTTTCCCCGACGAATTAATTAACCTCGTATAACTTGGCCCATATAATAAACAA
CAACGACCGATTATCTCCGCTAATTAATCCATCGCGTACACAGAAACCACGAACCATCTTAATCAAGTACACTAGCTAGT
AGTATCATGCAGTTGCTCAGCTAGCTATAAATTTGCAACCTCTAGCTTGTTGTC---------TATCATTCGTAGCTAGT
TGATCTTA-CAACATAGGAACCTTTTCTAGCTAGCTAGCAGAAAAAAGACCACCATGGCGGTGCCAGCCAAGTGCCTCCT
TCTGTTCTCCCTCTCCGCGGCGCTCCTCTCTCTGCTTGGCACCGGCGCCTCCGCCATGGGCCTGCCCCAGCCTCATGTGC
CGGTGAACTTCACCATCGGCGTGCAGGGCATGGTCTGGTGCAAGACCTGCAGGTACATCGGCTACAACGCAAACATGGAC
GCCTCCCCGCTCAAAGGTCAGCCCT---AACCCCAACCTCTGCATTC-TTTAACTACGTCCGCGTCC-------------
--------CATGTGCACGCTCCTTCATTCTGGCATCGATG-AAACATATATGTTGTGTGTGTTGGTGCAT-----GTAGG
CGTGGAGGTGTACCTGCAGTGCCGGCACGGCCCGCGGCGGCTGAAGAAGTTACCAGGGACATCGGGGCAGGGCGGCTACT
TCGTCATCCAGTCGGCGCACATGGCGTCCTTCACCAACGACGAGTGCAAGGTGTACGTGGAGAGCTCGGCCTCCACCGCG
TGCGGCCTCGTCGACGAACCCGCCGCCGGCGAGGGGCTGCCACTCAAGTTCGACTCATTCGTCAAGCACGGCGACGGCCT
GCAGGCGCTCTACTCCGTCGGCAACATCTTCTTCCGCCCCAGCAACCCCAACAAGTGCTACTGACGCATCCATCCGTC--
-----ATGTACGTACTTGTGGGACTTGAATAAATGGGTCAGGAACTCAGGATGAACTAGCTGTTGGAGTAGCTG------
-------GGGATATATATATCCGGTGCTGTACTGTTGA---TTTAAGTTTTTTCTGTTGTTGCAGTGGTTTTATAAGCTT
CTTTTAATTAGCAACCGCATGATCGAAATAACTCTTAATAT--GATTAGGGCAGTGTATGTCATGTCATGTGATGACTAA
CCGATGTTCTACAAGGCTCTCTGTATAACTAGTACTC---------------------------CTACTTCGTAAGTTCA
TTCAAGTCGGATTTGTTGTTTTTCCCAAG---------------------------------ATTTATTTAGAGAAAAGG
CATGAAGCTCGACTTGAAATTAATGAAGCC------ATCAACCAACTAGGATACAAAGGAACTGACTACAAAGGCCAAAA
CTTGACAAAAAACTGAAATGTCACAGGCAGATCACGCTTGAGACCAGGAGCTACAA-GTAGCAAAGCTACAAATGCCATC
GCCTACACTAAGAAACCACGGTCAAGCCATGGGAGGGCCCA-CGGCTGCTAGAGCAGCAGAGCAGAGGCCAGACAGAGAC
GCCAACGAACACGGACGGGAGAGGCTGAACCACATGGAGAGAAACCCGGCAGTGTCGTCGACCCAAAGGGGCTAATGTTG
GAGAGGAGAAC-G-CAGTCTCCCCTACGTGCATGCTGTGCCACTACACGAGGATATTGTATACAGGCCAACAACCCATGA
GGGTACCAAACAAGAGCCGCTGAAGGATTGCGAACCAGCCAACTCGCCTCCCACATCACTGGCAGCCTAGAGAGCAACGT
ACCAGCGCCGCCACCATTCACCATTCACCACAACCGCAATCTCCCCCCATCCCTAGGACGACGCCTCCAAGGAGGAACAC
GCCGTTTGAACGTCGCCATCGTCCGGCCCAAAAGGCCAAGGCTTTCACCTCGGAGCGTGAGGGAG-----GAAGAGGGTT
GGCGAGATTGGAAGCTCGACGCGCCCACAGGAGTGGGCCGGCGC
>chr1B_633
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------------------------------------------------------------------------AGACGCTT
GCTTAATTAAGTTACATGTAAGCAATGACAGCGCTTTGAAATTGAAAGTAGCTCGCTTGCGATGCACTCCAACAACGCTG
CAAGCCACATGCGAGTGCACCATGCATGTTTCCCCGACAAATTAATTAACCTCGTATAACTTGGCCCATAAAATAAACAA
CAACGGCCG---ATCTCCGCTAGTTAATCCATTGCGTAAACAGCTACCGCGAACCATCTTAATCAAGTACACTAGCTAGT
AGTATCATGCAGTTGCTCAGCTAGCTATAAATTTGCAACCTCTAGCTTGCTGTCTTCGCAACATATCATTCGTAGCTAGT
CGATCTTCGCAACATAGGAACCTTTTCTAGCTAGCTAGCAGGAAAAAGACCACCATGGCGGTGCTAGCCAAGTGCCTCCT
TCTGTTCTCTCTCTCCGCGGCGCTCTTCTCTCTGCTCGGCACCGGCGCCTCCGCCATGGGCCTGCCCCAGCCTCATGTGC
CGGTGAACTTCACCATCGGCGTGCAGGGCATGGTCTGGTGCAAGACCTGCAGGTACATCGGCTACAACGCCGCCATGGAC
GCCTCCCCGCTCCAAGGTCAGCTCT---AACCCCAACCTATGCATTC-CTTAACTACGTCCACATCC-------------
--------CATGTGCACGCTCCTTCATTCTGGCACCCATG-AAACATATATGTTGTGTGTGTTTGTGCAT-----GTAGG
CGCGGAGGTGTACCTGCAGTGCCGGCACGGCCCGCGGCGGCTGAAGAAGTTGCCAGGGACATCGGGGCAGGGCGGCTACT
TCGTCATCCAGTCGGCGCACATGGCGTCCTTCACCAACGACGAGTGCATGGTGTACGCAGAGAGCTCATCGTCGACCGCG
TGTGGCCTAGTCGACGAACCCGCCGCCGGCGAGGGGCTGCCGCTCAAGTTCGACTCCTTCGTCAAGCACGGCGACGGCCT
GCAGGCCCTCTACTCCGTCGGCAACTTTTTCTTCCGCCCCAGCAACCCCAACAAGTGCTAGTGACGCATTCATCCGTC--
-----ATGCACGTACTTGTGGGACTTGAATAAATGGGTCAGGAACTCAGGATGAATTAGCTGTTGGAGTAACTG------
-------GGGATATGC--ATCCGGTGCTGTAATGTTAA---TTTAAGTTTCTTCTGTTGTTGCAGTGGTTTTGTAAGCTT
CTTTTAATTAGCAACCGCATGATCGAAATAACTCGA---AT--GATTAGGGCAATGTATGTCCTGTCATGTGATGACTAA
CCGATGTGCTACAAGGCTCTCTGTATAACTAGTACTCCTACTTCGTAAGTTTTTTTTTAAGTTACTACTTCGTAAGTTCA
TTCAAGTCGGATTTATCCTACTTCGTAAGTTCATTCAACCCGGATTTATCGTTTTCATCTAAATTTTTTTAGAGAAAAGG
CATGAAGTCCGACTCCAAATAAATTAAAGAAGCTATATCAACCGGCTAGGATACAAAGGAACTGATTACAAAGGCCAAAA
CTTGACCAAGAACTGAAATGTTACAGGCAGATCACGCTTGAGACCAGGAGCTACTATGTAGCAAAGCTATAAATGCCATC
ACCTACACTAAAAATCCACAGTCTAGCTGTCAGAGGGCCCA-TGCA-GCTAGAGCAGCAGAGCAGAGATCAGCCAGAGAC
GCCAACAAACGCGGATGGGAGAGGCTGAACCGCATGAGGAGAAACCCGACACAGTCGTTGACCCAAAGGGACTAATGTTG
GAGAGGAGAAC-G-CAGTCTCCCCTACGTCCATGCCATGGCACTACACGAGGACGCCTTACACAGGCCAACGATCCATGA
GTGTACCACACAAGAGCCGCTGAAGGATTGCGGACCAGCCAATTCGCCTCCCGCATCACTAGCAGCCTAGAAAGCAACGC
ACCACCGCCGCCACCATTCACCAAACACCACAACGGCAATCTCCGCCCATCCCTAGGACGATGCCTCCAAGGAGGAACAC
GCCGCTGGAACCCCTCCGTCTTCCGACCCAAAAGGCCAACGCTTTCACCTCGGAGCGTGAGGGAG-----GACGAGGGGT
GGCGAGATTGGAAGCTCGACGCGCCCACTGGAGTGGACCGG---
>chr1D_998
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---------------------------------------------------ACCATGGCTGTGCTAGCCAAGTGCATTCT
TGTGTTCTCCCTCTCCGCCGTGCTCCTCTCTCTACTTGGCACCAGCGCCTCCGCCGTGGGCCTGCCCCCGCCTCAGTCGC
CGGTGAACTTCAGCATCGGCGTGCAGGGCATGGTCTGGTGCAGGACCTGCAGGTACAGTGGCTACAACGCCGACATGGAA
GCCTCCCCGCTCCAAGGTTAACTCT---GATCCCAACCTCTGCGTTC-TTCAACCACGTACGATACGTACGCATCGCATA
TTCGCATGCATGCATGTGCTCCTTCGTCCTTACATCGATCGATACATTGCG----TGCGTATATGTGCATGT---GCAGG
CGCGGTGGTGTACCTGCAGTGCCGGCACGGCCCACGGCGGCTGAAGAGGGTGGGAGGGGTGACAGGCCAGGGCGGCTACT
TCATCATCCAGTCGTCGCAGATGGCGTCCTTCACCAGCAAAGAGTGCAAGGTGTACGTGGAGAGCTCGTCGTCGGCGGTG
TGCAGCCTCGCCGACCAACCGGCCGCCGGCAAGGGGCTGCCGCTCAAGTTCGAGTCCTTCGTCAAGCAGGGCGACGGCCT
GCAGGCGCTCTACTCCGTCGGCAACTTCATGTTCCGCCCCAGCGACCCCAACAAGTGCTACTGATCCATCCA--------
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>chr1B_998
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---------------------------------------------------ACCATGGCTGTGCTAGCCAAGTGCATTAT
TGTGTTCTCCCTCTCCGCCGTCCTCCTCTCTCTGCTTGCCACCGGCGCTTCCGCCGTGGGCCAGCCCCCGCCTCAGTCGC
TGCTGAACTTCAGCATCGGCGTGCAGGGCATGGTCTGGTGTAGGACCTGCAGGTACAGTGGCTACAACGCCGACATGGAC
GCCTCCCCGCTCCAAGGTTAACTCT---GATCCCAACCTTTGCGTTC-TTCAACCACGTACG-----TACGCATCGCATA
TTCGCATGCATGCATGTGCTCCTTCGTCCTTACATCAATCGATACATTGCGCC-GTGTGTGTTTGTGCTTGT---GCAGG
CGCGGTGGTGTACCTGCAGTGCCGGCACGGCCCGCGGCGGCTGAAGAGGGTGGCAGGGGTGACGGGCCAGGGCGGCTACT
TCATCATCCAGTCGTCGCAGATGGCGTCCTTCACCAGCAAAGAGTGCAAGGTGTACGTGGAGAGCTCGTCGTCGTCGGTG
TGCAGCCTCGCCGACCAACCGGCCGCCGGCAAGGGGCTGCCGCTCAAGTTCGAGTCCTTCGTCAAGCAGGGCGACGGCCT
GCAGGCGCTCTACTCCGTCGGCAACTTCATGTTCCGCCCCAGCGACCCCAACAAGTGCTACTGATCCATCCAGCCATCGG
GAACAATGGATGTACTTGTAGGAGTTGAATAAATGT--------ATTAGGATTAATTAACTGTTGGAGACGCGTCGATTG
ATTAGCTGGGATATGCAAGCACGGTGCTGTAAGGTTGATCGTTTAAGTTTCTTCGGTTGTTGCAGTGTTTTTTTAAG---
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>chr1A_1007
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------------------------------------------------------------GTGCTAGCCAAGTGCCTTCT
TCTGTTCTCCCTCTCCGCCGCGCTCCTCTCTCTGCTCGGCACCGGCGCCTCCGCCATTGGCCTGCCCCAGCCTCATGCGC
CAGTGAACTTCACCATCGGCGTGCAGGGCATGGTCTGGTGCAAGACCTGCAGGTACATCGGCTACAATGCCAACATGGAC
GCCTCCCCACTCAAAGGTCAGCCCTAACAACCCCAACCTCTGAATTC-TTTAACTACTTCCGCATCC-------------
--------CATGTGCACGCTCCTTCATTCTGGCATCGATG-AAACATATACGTTGTGTGTGTTTGTGCAT-----GTAGG
CGTGGAGGTGTACCTGCAGTGCCGGCACGGCCCGGGGCGGCTGAAGAAGGTGCAAGGGGCATCGGGGCAGGGCGGCTACT
TTGTCATCCAGTCGGCGCAGATGGCGTCCTTCACCAACGACGAGTGCAAGGTGTACGCGGAGAGCTCGTCGTCGACCGCG
TGCGGCCTCGTCAACGAACCCGCTGCCGGCGAGGGGCTGCCGCTCAAGTTCGACTCCTTCGTCAAGCACGGCGATGGCCT
GCAGGCGCTCTACTCCGTCGGCAACTTCTTCTTCCGCCCCAGCAACCCCAACAAGTGCTACTGACGCATCCATCCGTC--
-----ATGTACGTACTTGTGGGACTTGAATAAATGGGTCAGGAACTCAGGATGAATTAGCTGTTGGAGTAGCTG------
-------GGGATATGC--ATCCGGTGCTGTAATGTTGA---TTTAAGTTTCTTCTATTGTTGCAGTAGTTTTGTAAGCTT
CTTTTAATTAGCAACCGCATGATCGAAATAACTCGA---ATATGATTAGGGCAGTGTATGTCCTGTCATGTGATGACTAA
CCGATGTGCT-CAAGGCTCTATGTATAACTAACACTCCTACTTCGTAAGTTCG---------------------------
TTCAAGTCGGATTTATCGTTTCT-CCAAG---------------------------------ATTGTTTTACAAAAAAGG
CATGAAGCCCGACTTCAAATTAATGAAGTC------ATCAACCAGCTAGGATACAAAGGAACTGATTACAAATGCCAAAA
TTTAACCAAAAACTGAAATGTCACAGGCAGATTACGCTTGAGACCAGGAGTTACAA-GTAGC--AGCTACAAACGACATC
GCCTACACTAAGAAACCACAGTCAAGCCATCGGAGGGCCCACCGCA-GCTAGAGCAGCAGAGTAGAGGCCAACCATAGAT
GCCAACGAACACGGACGGGAGAGGCTGAACCGCATGGAGAGAAACCTGGCACTGTTGTCGACCCAAAGGGACTAATGTTG
GAGAGGAGAACA--CAGTCTCCCCTACGTCCATGCCGTGCCACTACACGAGGACGTTGTACACAGGCCAACAACCCATGA
GGGTACCTGACAAGAGCCACTAAAGGATTGCGGACCAGCCAACTCGCCTCCCACGTCACTGGCGGCCTAGAGAGCAACGC
ACCACTGCCGCCACCATTCACCAAACACCACAGCCGCAGTCTCTGCCCATCCCTAGGACGACGCCTCCAAGGAGGAACAA
GCCGCTGGAACGCTGCCGTTGTCCGGCCCAAAATGCCAAGGCTTTCACCTGGGAGTGTGAGGGAG-----GAAGCGGGGT
GGCGAGATTGGAAGCTCGATGCGCCCACAGGAGTGGACTGGCG-
>chr1D_1105
GCC-----------------------------------------------------------------------------
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--GTGAACTTCACCATCGGCGTGCAGGGCATGGTCTGGTGCAAGACCTGCAGGTACATCGGCTACAACGCCGACATGGAC
GCCTCCCCGCTCCAAGGTTAACTCT---TATC------TCTGCGTTC-TTTAACTACGTCCTCATCC-------------
--------C--GTGCATGCTCCTTCATTCTGGCATCGATCCAAACATATTTGATGTGTGTGTTTATGCAA-----GCAGG
CGTGGAGGTGTACCTGCAGTGCCGGCACGGCCCGCGGCGGCTGAAGAAGTTGCCAGGGGCATCGGGGCAGGGCGGCTACT
TCACCGTCCAGTCGGCGCACATGGCGTCCTTCACCAACGACGAGTGCAAGGTGTACGTGGAGAGCTCGTCGTCAACCGCG
TGCGACCTCGCCGACGAACCTGCTGCCGGCGAGGGGCTGCCGCTCAAGTTCAAGACCTTCGTCCAGCGCGGCGACGGGCT
GCAGGCGCTCTACTCCGTCGGCAACTTCTTCGTCCGCCCCAGCGACCCCAACAACTGCTACTGATCCTTCCGCCCGTC--
-----ATGTG----CTCGTAGGACTTGAATAAAC-------GAAATTTGGATTAATCAGCTGTTGGAGATGCTTTAGTA-
ATTAGCTGGGGATGTGCT-----GTGCTGCAAGGTTTA---TTTAAATTTATTCTCTTGTTGCAGTGGTTTCCTAAACTT
CTTTTAATTACCAAC-----------------------------------------------------------------
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>chr1B_1105
GCC-----------------------------------------------------------------------------
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--GTGAACTTCACCATCGGCGTGCAGGGCATGGTCTGGTGCAAGACCTGGAGGTACATCGGCTACACCGCCGACATGGAC
GCCTCCCCGCTCCAAGGTTAACTCT---TATC------TCTGTGTTTTTTTAACTACGTCCTCATCC-------------
--------C--ATGAATGCTCCTTCAT---------------AGCATATATGATTTGTGTTTATACTTTATACACGCAGG
CGTGGAGGTGTACCTGCAGTGCCGGCACGGCCCGCGGCGGCTGAAGAAGTTGCCAGGGGCATCGGGGCAGGGCGGCTACT
TCACCATCCAGTCGGCGCACATGGCGTCCTTCACCAACGACGAGTGCAAGGTGTACGTGGAGAGCTCGTCGTCAACCGCG
TGCGACCTCGCTGACGAACCTGCTGCCGGCGAGGGGCTGCCGCTCAAGTTCAAGACCTTCGTCCAGCGCGGCGACGGGCT
GCAGGCGCTCTACTCCTTTGGCAACTTCTTCTTTCGCCCCAGCGACCCCAACAACTTCTACTGATCCGTCCGCCCGTT--
-----ATGTG----CTCGTAGGACTTGAATAAATG---------------------------------------------
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>chr1B_1934
TTTTTTA-------------------------------------------------------------------------
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---------------------------------------------------------------------TAGAGAAAAGG
CATGAAGGCCGACTTCAGATTAATGAAGCC------ATCAACCGGCTAGGATACAAAGGAGCTGATTACAAAGGCCAAAA
CTTGACCAAAAACTGAAAAAACACAGGCGAAACACACTTGAAACTAGGAGCTACAC-ATAGCAAAGCTGCAAACGCCATC
GCCTACACTAAGAAACCATAGTCAAGCCGCCGGAGCGCCCACTGCA-GCGAGAACGCCAGAGCAGAGGCCAACCAGAGAC
GCCCACGAAGGTGGACGGGAGAGGCTGAGCCGCATGGAGATAAACCCGGCTCTGTCGTCGACCCAAAGGGGCCAATGTTG
GAGAGGAGAA--G-C-GTCTCCCCTACATCCATACCGTGCCACTACATGAGGACGCCGAACACCGGCCAACAGCCCACGG
TGGTACCGGACAAGAACCGTTGAAGGATTGCGGACTAGCCAA-TCGCCTCCCACATCATCGGCGGCCTAGAAAGCATCAC
ACCGCCGCCGCCACCATCCACCAAACGCCACAGCCGCAACCTCCGCCCATCCCTAGGATGACGCCTCCAAGGAGGAACAC
GCCGCTGGAACGCCGCCGTCGTCCGGCCCAAAAGGCCAAGGCTTTCACCTGGGAATGCGGGGTAG-----GAAGAGAGGA
GGCAAGATTGGAAGCTCGACGCGCTCTCAGGAGGGGGCCGGCGC
>chr5D_1934
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---------------------------------------------------------------TTTTTTTAGAGAAAAGG
CATGGAGCCCGACTTTAGATTAATGAAGCC------ATCAACCGGCTAGGATACAAAGGAGCTGATTACAAAGGCCAAAA
CTTGACCAAAAATTGAAGTATCGCAGGCGAAACACGCTTGAAACCAGGAGCTACAC-ATAGCAAAGCTGCAAACGCCATC
GCCTACACTAAGAAACCACAGTCAAACCGCCGGAGCGCCCACCGCG-GCAAGAACGGCAGAGC--AGGCCAACCAGAGAC
GCCGACGAAAGTGGACGGGAGAGGCTGAGCCGCATGGAGAGAAACCCGGCTCTGTCGTCGACCCAAAGGGGCCAATGTTG
GAGAGGAGAAA-G-C-GTCTCCCCTACGTCCATACCGTGCCACTACACGAGGACGCCGAACACCGGCCAACAGCCCACGG
TGGTACCAGACAAGAACCACTGAAGGATTGCGGA-CAGCCAA-TCGCCTCCCACATCACCGGCGGCCTAGAAAGCAGCGC
ACCGCCGCCGCCACCATGCACCAAACGCCACAGCCGCAACCTCCGCCCATCCCTAGGACGACGCCTCCAAGGAGGAACAC
GCCGCTGGAACGCCACCGTCGTCCGGCCCAAAAGGCCAAGGCTTTCACCTGGGAACGCGGGGGAG-----GAAGAGAGGA
GACGAGATTGGAAGCTCGACGCACCCTCGGGAGGGGACCGGCGC
>chr5B_1934
TTTTTTT-------------------------------------------------------------------------
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---------------------------------------------------------------------AAGAGAAAAGG
CATAAAGCCCGACTTCAGATTAATGAAGCC------ATCAGCCGGCTAGGATACAAAGGAGCTGATTACAAAGGCCAAAA
CTTGACCAAAAACTGAAAAATCGCAGGCGAAACACGCTTGAAACTAGGAGCTACAC-ATAGCAAAGCTGCAAACGCCATC
GCCTACACTAAGAAACCATAGTCAAGCCGCCGGAGCGCCCACCTCG-GCGAGAACGCCAGAGCAGAGGCCAATCAGAGAC
GCCGACGAAGGTGGACGGGAGAGGCTGAGCCGCATGGAGATAAACCCGACTCTGTCGTCGACCCAAAGGGGCCAATTTTG
GAGAGGAGA-A-G-C-GTCTCCCCTACATCCATACCGTGCCACTACACGAGGACGTTGAACACCGGCCAACAGCCCACGG
TGGTACCGGACAAGAACCACTGAAGGATTGCGGACCAGCCAA-TCGCCTCCCACATCACCAGCGGCCTAGAAAGCATCAC
ACCGCCGCCGTCACCATCCACCAAACACCACAGCCGCAACCTCCGCCCATCCCTAGGACAACGCCTCCAAGGAGGAACAC
ACCGCTGGAACGCCGTCGTCGTCCGGCCCAAAAGGCCAAGGCTTTCACCTGGGAACGCGGGGGAG-----GAAGAGAGGA
GACGAGATTGGAAGCTCGACGTGCCCTCAGGAGGGGACCGGCGC
>chr1B_1938
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-------------------------------------------------------------------TTTAGAGAAAAGG
CATAGAGCCCA---TCAAATTAATGAAGCC------TTCAACCTGCTAGGATACAAATGAGATGATTACAAAGGACAAAA
CTTGACCAAAAACTGAAAGATCACATGCAAATCACACTCAAGACAAGGAGCTACAA-GTAGCAAAGAAACAAACGCCACC
GCCTACACTAAGAAACCATAGTTAAGCCGCCAGAGCACCCAAAGCA-GCTAGAGCGGTAGAGCAGAGGCCAACCAGAGAC
ACTAGCGCACGCAGACGGGAGAGGCTGAACCACACGGAGAGAAACCTGGCACTG-CGTCGACCCGAAGGGGCCAATGTTG
GAGAGGAGA-ACG-CAGTCTCCCCTTCGTCCATGTCATGTCACTACACGAGGACACTGAACACCGGCCAACAACCCACGA
GCTAATCAGACAGGAGCCACTAAAGGATTGTAGACCAGCAAACTCGCCTCCAACACCACCGGCGACCTAGAAAGAAGCGC
ACCACCACCGCCACCAATCACCAAACACTACAACCGCAACCGCG--CCATCCCTAGGATGACACCTCCAAAGAGGAATAC
ACTATTGCAACGCCGCCGTCATCTAACCCAAAAGGCCAAGGCTTTCACCTGGGAGCGCAGGGGAATCAAAGAAGAGGGGT
GGCGAGATCGGAAGCTCGGCGTGCCCTCAAGAG-----------
>chr5D_1938
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-------------------------------------------------------------------TTTAGAGAAAAGG
CATGGAGCCCGACTTCAGATTAATGAAGCC------ATCAACCGGCTAGGATACAAAGGAGCTGATTACAAAGGCCAAAA
CTTGACCAAAAACTGAAATATCGCAGGCAAATCACGCTTGAAACCAGGAGCTACAC-ATAGCAAAGCTGCAAACGCCATC
GCTTACACTAAGAAACCACAGTCAAGCCGCCAGAGCGCCCACCGCG-GCAAGAATGGCAGAGCAGAGGCCAACCAGAGAC
GCCAACGAAAGTGAACGGGAGAGGCTGAATCGCATGGAGAGAAACTCGGCTCTGTCATCGACCCAAAGGGGCCAATGTTG
GAGAGGAGA-AAG-C-GTCTCCCCTACGTCCATACCATGCCACTACATGAGGACGCCGAACACCAGCCAACAGCCCACGA
TGGTACCGAACAAGAACCGCTGAAGGATTGCGG-CCAGCCAA-TCGCCTCCCACATCACCGGCGGCCTAGAAAGCAGCGC
ACCGCCGCCACCACCATCCACCAAACGCCACAGCCGTAACCTCCGCCCATCCCTAGGACGACGCCTCCAAGGAGGAACAC
GACGTTGGAACGCCGCCGCCGTCCGGCCCAAAAGGCCAAGGCTTTCACCTGGGAACGCGGGGGAG-----GAAGAGAGGT
GACGAGATTGAAAGCTCGACGCGCCCTCAGGAGGGGACCTGCGC
>chr6B_1938
TTTCAG--------------------------------------------------------------------------
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------------------------------------------------------------------------AGAAAAGG
CATGGAGCCCGACTTCAGATTAATGAAGCC------ATCAACCGGCTAGGATACAAAGGAGCTGATTACAAAGGCCAAAA
CTTGACCAAAAACTGAGATATCGCAGGCAAATCACGCTCGAAACCAAGAGCTACAC-ATAGCAAAGCTGCAAACGCCATC
GCCTACACTAAGAAACCACGGTCAAGCCGTTGGAGCGCCCACCGCG-GCAAGAACGGCAGAGTAGAGGCCAACCAGAGAC
GCCGACGAAAGTGAACGGGAGAGGCTGAGCCGCATGAAGAGAAACCCGACTCTGTCATCGACCCAAAGGGGCCAATGTTG
GAGAGGAGA-AAGCC-GTCTCCCCTACGTCCAAACCGTGCCACTACACGAGGACGCCGTACACCGGCCAACAGCCCACGA
TGGTACCGGACAAGAACCGCTGAAGGATTGCAGACCAGCCAA-TCGCCTCCCACATCACCGGTGGCCTAGAAAGCAGCGC
ACCACCGCCGCCGCCATCCACCAAATGCCACAGGCGCAGCCTCCGCCCATCCCTAAGACGACGCCTCCAAGGAGGAACAC
GCCGTTGGAACGCCGCCGTCGTCCGGCCCAAAAGGCCAAGGCTTTCACCTGGGAACGCGGGGGAG-----GAAGAGAGGT
GACGAGATTGGAAGCTCAACGCGCCCTTAGGAGGGGACCGGCGC
>chr2B_1973
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----------------------ATGAAGCC------ATCAACCGGCTAGGGTATGAAGGAGCTGATTACAAAGGCCAAAA
CTTGACCAAAAACTGAAATATCACAGGCATATCACACTTGAAACCAGGAGCTACAA-GTAGCAAAGCTGCAAACGCCATC
GCCTACACCAAGAAACCACAGTCAAGCCGCCAGAGCGCCCACCACA-ACTACAGCGGTAGAGCAGAGGCCAACCAGAGGC
GCCGACGAAAGTGGACGAGAGAGGCTGGACTGCATGGAGAGAAACCCGACACTGTTGTTGATCCAAAGGGGCCAATGTTG
GAATGGAGA-ACGTC-GTCTCCCTTACATCCATGTCGTGCCACTACATGAGGACGCCATACACCAGCCAACAACCCACGA
TGGTACCGAAGAAGAGCCGCCGAAGGATTGCGGACTAGCCAACTCGCCTCCCACATCATCGGCGGCCTAGAGAGCAGTGT
ACCACCACCGCCACCATCCACCAAACAACACAGCTGTAACCTCCGCCTATCTATAGGACGATGCCTCCAAGGAGGAATAC
GCCATTGGAACGCCACTGTCGTCCGGCCCAAAAGGCCAAGGCTTTCACTTGGGAGCGTAGGGGAG-----GAAGTGAGAT
GACGAGATTGGAAGCTCGACGTGCCCTCAGGAGGGGACCGGCGC
>SNPs
S--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---------------S----------------------------S--------------S---------------S----
--------------------------------------S-------------------------------S---------
-----S---SSS----------S---------S-----S----SS---S-------------------------------
-------------------------------------------------S------------------------------
S------S---------------------------------S----------------------S---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
---------------------------------------------------------------S----------------
---------------------------------------------------------------S----------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------S-S--S------
-----------------------------------------S--------------S-----------------------
-------------------------S------------------------------------------------------
-------------------------------------------------------S------------------------
--------------SS---------------S------------------S---------------------S-------
----------------------------------SSSSS-----------------------S-----------------
-------S------------------------------------------------------------------------
--------------S-S-------------------------------------------------S-------------
--------S------S----------------------------S--------------------S--------------
------S-------------------------------------------------------------------------
------------------------------S-------------SSS-------------------------S-------
---------------------------------------------------S----------------------------
-----------------------------S-----S-----------------S------S-------------------
--------------------------------S-----------------------------------------------
----S------------------SS-------------------S-----------------------------------
------S-----S----S------------------------------------------------------------S-
--------------------------------------------
>forward_430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CACTACATGCATGCTTGGCC--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2461
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------TACAGGCCAACAACCCATGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
