>input_sequence_73891
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GGGCAGACTGAATCCACCATCAAAACTGACAATATGGCTTCCTTCTCCTCTTCCTCTACTAGCGTGATCAC
CGTCCTCTTGCTGCTCTTGCCCGTCCTCCTTGCGCCGCCGGCGAGTGCCGTCCCTG------TACTTGCCGCATGCAAGA
CCGTCGGCGGCGGGAGCACCTACTTCGACGTCACGTTCTGCCTGGAGGCCCTAGGCTCCGTCGGCGGTGGCGGTCTCTAC
CGAGACCTCGCCGCCGCTGCCGTGGGCCTCCTCGCTGCCAACGCCACCAGCACGGAGGCCAAGATCGGCCGTCAGCTTGG
GGAGAGCGGCGTGAAGATTAAGGCGGGGGACGCGGCCCTGGCGCGGCCCCTCCGGTCGTGCCTGTCGCTGTACGGCGGTA
TAGTGCACGGTGGGCCTGCGTGCGCTGCCGCGGTCAAGGGCGGGAAGTTCGGCGATGCGACGGCGATCCTGGAGAAGGCA
GCGGCCGCAGCGAAGGAGTGCGAGGACGGGTTCAGGAGGAGCAACGCGGCTTCGCCGCTGACGGCGGAGGACGATGACGC
GTTCAAGCTCGCAAAGCTCGGCGTCGCGTTGCTCGGTTTCGCTTGAGAGCGCGGAAATGAATATTGTTGTTTTGA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr7A_1_TraesCS7A01G075200
CTATGAACACCTTCAAGAGAATGAGCTGGCATATATCCTGAGATTTATGAAGTCATCGTAGGCGCCTCGTCGTCGACGGG
AACGTCTCCTCCCATTAAGAGCGCATCGTCGAAAATCATGAAATAAATTCAAAAATAATGCGAGCACCTGGACTTGAACC
CTGGTGGGATGGGAATACCACCGTCCCTCTAACCATCCAACTACAAATTGGTTCGAGCTGGGGAGATTATGTGACGGGTG
GACATCGTGGGTACCAAACGATGTACTGACTGTGCTTGAATAGTGGAGATAGTTAAGATGCCGGTATTATATCCACTTCC
TATTTAGCTGAACATTATCTGACCAAAGAATATACGAAACTTTATAATGAATCATGGTCTCAATATGTGAAGTAGAACTA
ATTATCCTTTGACCAAATGCCCTTTTATCATTGATCATTTTTTATTGTTTTTCGCCCGTGGCAACGCAGGGAATATATTA
GTCATGTGGTAATGTATGAGAATATCGTATCCCGTTATAATGCAGGGACAATTATTACAGGATCTATGAAAATACTAGTA
CAAGTATCGGGGTGCTTTCTTAAATTTT---------------------CGTTTGAGAAGGTAAAGTTTC-TTGTCATTG
TATGCTAAATCAGATCAATGATTCGTTTGAAAA----GGTAAATTTTCTGTAATCGTATATTACCATTTTTCTTTGCAGC
TATATATTATAATGCAATTAATTGTCCTCGTTACAATTTACCTTTGTTTTATTACCACG------AATAAGTTTACCTTT
G-TTTTTTTACGACGAATTGAATGCCTTTTCCCCGAAATACTGTAGTTTAATGTCGAAATGTAAATCCAAAAGTAGCCCT
TATTATATGCATTATTAAGAAAGGTCCATTGATACAGCCGGTCAAATATGGAATCAGATGGAAAAGTCCGC--AAAAAGG
AAGCAAATCGAAAAGTTTATGAAATTAATCGTCCAACAACTCACACCTTAT--------------ACTAGACACCCGAGG
CTGAGGTCTGGGCAGACTGAATCCACCATCAAAACTGACAATATGGCTTCCTTCTCCTCTTCCTCTACTAGCGTGATCAC
CGTCCTCTTGCTGCTCTTGCCCGTCCTCCTTGCGCCGCCGGCGAGTGCCGTCCCTG------TACTTGCCGCATGCAAGA
CCGTCGGCGGCGGGAGCACCTACTTCGACGTCACGTTCTGCCTGGAGGCCCTAGGCTCCGTCGGCGGTGGCGGTCTCTAC
CGAGACCTCGCCGCCGCTGCCGTGGGCCTCCTCGCTGCCAACGCCACCAGCACGGAGGCCAAGATCGGCCGTCAGCTTGG
GGAGAGCGGCGTGAAGATTAAGGCGGGGGACGCGGCCCTGGCGCGGCCCCTCCGGTCGTGCCTGTCGCTGTACGGCGGTA
TAGTGCACGGTGGGCCTGCGTGCGCTGCCGCGGTCAAGGGCGGGAAGTTCGGCGATGCGACGGCGATCCTGGAGAAGGCA
GCGGCCGCAGCGAAGGAGTGCGAGGACGGGTTCAGGAGGAGCAACGCGGCTTCGCCGCTGACGGCGGAGGACGATGACGC
GTTCAAGCTCGCAAAGCTCGGCGTCGCGTTGCTCGGTTTCGCTTGAGAGCGCGGAAATGAATATTGTTGTTTTGAATAAA
ATAAATATTTGCATATACTATAATACGTATCTTTCTAGTTTAGTTGTTCTACTTGTAATCCTCGTGCTCTTTGATCTCTG
ATCCTCGTGTGTTTTTGTTAGATCAGCGTTGTGTGTCGGGAGGCCAAGGTCCGAAA--TGCTGCTATCCGGTGTCGGATA
GTCGGGTAACAAAATACGAAAAGGTGAGACGGCACCCAGGTGTCCCGGCACCCCCCCTTACCCAGCAGCAGGTCATTTGC
GGTGGCAGGGTAATTAAGCAGTCAATTTGCTGACACGAATAGGGCCAGTCTAGGCTGTAGTTGGCATAGTAGGCATGGCA
GTAGGCGCAGGCGGAGCTTCAGCAAGGCTGAAAGGGCCGTGGCCCGCCCAGCCCATGGAATTTTATACACTATATATCTA
CTTCCGGACCTTTGTCTCAAAAAAAAAATCTACTTCTGGACCTTAAAACAGCAGCTCACATGCTACCTTTTTTATTTCGC
CGCACACCTTTGGGCTGCAAGCTCCGCCACTGGCAGTAGGCACTGTTGAGACTGTGGTAGAGGCCAGGCGGGCAATCGTG
TACAACTGTTGGTCAGCTTTTTCCATATCCAATAGAAAAATGAAGCATGAACATGCAGCCATGCAGCCAAGCGCAGTTGT
CTCGGTCAATCATGCAAAAAAAAGTAGACAGAGTATGATGTGGCCAATGGAGAGCGGCGTTGCAGAGGCCGAGCGTCAGG
TAGCTCGGTATCCCCTAGGTTGGAACGGACTTCGCGATTCCTTCTTGTCATGCGCTTCCGAGGTATACGGGCTAATATAC
ACATGCATGAATAGTGCAGCCGTATGGAAGTGGCACATTGTCAGGCCCTGCTCGCACGGGTTAAACGAACGCGGGTTTTT
GAAATAGCACAGGATAAGCCTGTCCTGTCTGCAGAGTTGCAGCAGCAATTATTGTTGTACTGGCCAAACGAAAAGTATTA
ATTTTCTATTCAGCTATTTTTGGTATATGTACCATCG
>chr7D_140
--------------------------------------------------------------------------------
-----------------------------------------------------------GCGAGCACCAGAACTTGAACC
CTGGTGGGCTGGGGATACCACCGTCTCTCTAACCATACAACCATAGATTGGTTCGCGGTGGGGAGATTATGTGACGGGTG
GAGA-CGTGGGTACCAAACGATGTACTGACTGTGCTTGGATAGTGGAGATAGTTAAGATGCCGGTATTATATCCACTTCC
TATTTAGCTAAACATTATTTGACCAAAAAATCTATGAAATTTG-TAATGAATCATGGTCTCAATATGTGAAGTAGAACTA
ATAATCCTTTAACCAAATGCCCTTTTATCATTGATCATTTTTTATAATTTTTTGCCTGTGGCAACGCAGG-AATATATCA
GTCATGTGACAATGTACGAGAATATCGTATCCCGTTAAAATGCATGGACAATTATTACAG-ATCTAAGAAAATACTACTA
GAAGTATCAGGGTACTTTCTTTAACGACCATCAAATCAGATCAAGGATCCGCATTAGAAGGTAAAGTTTC-TTGCAATTG
TATGCTGAATCAGATCAATGATTCGTTCGAAAA----GGTAAATTTTCTGTAATCGTATATTACCGTTTTTCTTTGCGGT
GATATATTATAATGCAATTAATTTCCCTCGTTTCAATCTACCTTTTTTTTGCCCGCC-------AAATAAATCTACCTTT
G-TTTTTTCACGACGAATTGAATGTCTTTTCCCTGAAATACCGTAGTTTAATGTCGAAATGCAAATCCAAAAGTAGCCCT
TATTATATGCATTATTAAGAACGGTCCATTGATACAGCCAGTCAAATATGGAATCAAATCGCAAAATACCGCAAAAAAGG
AATCAAATCGAAAATTTTATGAAATTAATCGTGGAACAACTCACACCTTACATATATATAC----ACTAGACACCCGAGG
CTGAGGTCTGGGCAGACTGAATCCACCATCAAGCTGACA---ATGGCTTCCTTCTCCTCTTCCTCTACTAGCGTGATCAT
CGTCCTCTTGTTGCTCTTGCCCGTCCTCCTTGCGCCGCCGGCAAGTGCCATCCCTG------TACTTGCCGCATGCAAGA
CCGTCGGCGGCGGGAGCACCTACTTCGACGTCACGTTCTGCCTGGAGGCCCTTGGCTCGGTCGGCGGTGGCGGCGTCTAC
TGAGACCTCGCCGCCGCTGCCGTGGGCCTCCTCGGTACCAACGCCACCAGCACCCAGGCCAAGATCGGCCGTCTGCTTGG
GCAGAGCGGCGTGAAGATTAAGGTGGGGGACACGGCCCTGGTGCGGCCCCTCCGGTCGTGCCAGTCGTTGTACGGCGGTA
TAGTGCACGGTGGGCCTGCATGCACCGCCGCGGTCAAGGGCGGGAAGTTCGGCGATGCGGCGGCGATTCTGGAGAAGGCA
GCAGCCGCAGCGAAGGAGTGCGAGGGCGGGTTCAGGAAGAGCAAAGCGG---CGCCGCTGACGGCGGAGGACGATGACAC
GTTCAAGCTCGCAAAGCTCGGCGTCGCGTTACTCGGTTTGGCTTGAGAGCGCGGAAATGAATATTGTTGTTTCAAATAAA
ATGAATTTTTTCATATACTATAGTACGTATCTTTCTGGTTTAGTTGTTCTACTTGTAATCCTCGTGCTCTGTGATCTCTG
ATCTT----TGTGTTTGTTAGATCAGCGTTGCGTGTTGGGAGGCCAAGGCCCG--A--TGATGCTATCCGGTGTCGGGCA
GTCGGGTAACCAAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr4A_589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGCTTAAGAAGGTAAAGTTTTTTTGCAATTG
TATGCTAAATCAGATCAATGATTCGTTTGAAAAAAAAGGTAAATTTTCTGTTAGCATATATTACCCTTTTTCTTTGCAAC
GATGTATTATAA--CAATTAATTGTCCTCCTTACAGTTTACCTTTGTTTTTCTTTGGCCTGCCAAAATAAAATTGCCTTT
GTTTTTTTGACGATGAATTGAATGTCTTTCCCCTGAAATTTCGTAGTTTAATGTTGAAATGTAAATCCAAAAGTAGCCCT
TATTATTTGTAC--TTAAGACCGGTCCATTGATACACCCGGTCAAATATGGAATCAAATCGAAAAATCCCTCAAAAAAGG
AATCAAATCGAAAATTTTATGAAATTAATTGTCCAACAACTCACACCTTATATATACATATATATACTAGACACCTGAGG
CTGAGATGTGGGCAGACTGAATCCACGAGCAAAACTGACAATATGGCTTCCTTCTCCTCTTCCTCCACTAGCGTGATCAT
CGTCCTCTTGCTGCTCTTGCCCGTCCTCCTTGCCCCGCCGGCGAGTGCCGTCCCTG------TACTTGCTGCATGCAAGA
CCGTCGGTGGCGGGAGCACCTACTTCGACGTCACGTTCTGCCTGGAGGCCCTAGGCTCCGTCGGCGGTGGCGGTGTCTAC
CAAGACCTCGCCGCCGCTGCCGTGGGCCTCCTCGCTACCAACGCCACCAGCACGGAGGCCAAGATCGGCCGTCTGCTTGG
GGAGAGCGGCGTGAAGATTAAGGCGGGTGACGCGGCCCTGGCGAGGACCCTCCGGTCATGCCAGTCGCTGTACGGCAGTA
TAGTGCACGGCGTTCCTGCGTGCACCGCCGCGGTCAAGGGCGGGAAGTTCCGCGATGCGACGGCGATCCTGGAGAAGGCA
GCGGCTGCAGCGAAGAAGTGCGAGGATGGGTTCAGGAAGAGCAACGCGTCCTCGCCGCTGACGGCGGAGGACGAGGACGC
GTTCAAGCTCGCAAAGCTCGGCGTCGCATTGCTCGGTTTCGCTTGAGAGCGCGGG-ATGAATATTGTTGTTTTGAATAAA
ATGAAAATTTTTATATACTATAATACGTATCTTTCTAG--------------TTGTAATCCTCGTGCTCTGTGATATCTG
ATCTT----CGTGTTTGTTAGATCAGCGTTGTGTGTCGAGAGGCCAAGGTCCG--ATGTGATGCTATCCGCTGTCGGGCA
GTCGGGTAACAAAA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr4A_1034
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ATGGCTTCCTTCTCCTGCTCCTCTAGTAGCGTGATGGG
CGTGATCTTGCTGCTCTTCTCCGTCCTCCTTGCGCCTGCGCGGTCGGCCAGCGACCAGATGATACTTGCCGCATGCAAGA
CCGTCGGCGGCGGGAGCACCTACTTCGACGTCACGTTCTGCTTGGAGGCCCTCGGCTCCGCGGGCGGCTCCGGCGGCTAC
CAAGACCTCGCGGCCGTCGCCGTGGACCTCCTCGCGACCAACGCCACCAGCACGGAGGCCAAGATCGACCGCCTGCTCGG
GTGCGGCGGCGTGGAGGTCAAGGCGGATGACGCCGCCCTGGCGCGGTGCCTCCGGTCGTGCCAGTCGCTGTACGGCGGCA
TAGTGGACGACGGGCCTGCGTGCACCGCCGCGGTCAAGGGCGGGAGGTTCGGCGAGGCGACAGCGATCCTGGAGAAAGCC
GCGGCCGCGGCGAAGGAGTGCGAGGGTGGGTTCGAGAAGAGGAGAGCGGCTTCGCCGCTGACGGCGGAGGACGACGACGC
GTTCAAGCTCGCAAAACTCGCCGTCGCGTTGCTCCGTTTTGCTTGAGAGCCCGGAAACGGACATTGCTG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-S---------
--------S----S-----------S----------S----S-S-S---------S-S----------------------
--S-S---------------------------------S-----------------------------------------
---------S--------S--------S---S--S----S--SS------------------------------------
--S-------S----------------------------------SS-----S---S-------------S-------S-
--------SS------S--------------------S------S---------------S-----S----------S--
S-------S----S-------S--SSSS-----------------------S--S-------------------SS----
-----------------------------------------------------------------S--------------
S-------------------------------------------------SS-SS-S-S-----------S---------
--------S---------------S--------S-------S--------------------------------------
---------------------S----------------------------------S--S-----S---SS---------
--S-----------S-----------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------------------S------------------------------------S------
--------------------------------------------------------------S-----------------
-----------------------S-S------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--S-------S-----------------------------------------------------------S---------
---S-SSSS---S----------------------------------------SS-----S----------------SS-
--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_66
----------------------------------------------ATGAAGTCATCGTAGGCGCC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_1982
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGGCATAGTAGGCATGGCA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
