>input_sequence_73882
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---------------------------------------ATGAAGGTTCTGCATGCTCTTAATTTCCTTCCTCCCAAGCT
TGTTTCTGAGATTTTATTGGTTAC------TCACCGTTTCTGTTATTCTGAACCAGATGGTGCTTAAGGTGCCGATGGTC
TGCAAGAAGTGCAAATCTTGCGTCCTTACGATTGTGTCCAAGGTCAAAGGTCTGTA-TATTCTCTCGCTCTATGGCCTTG
ATTCGCTCGT----CTCTATAACTTACTTGACAGGTCGTGTCGTGTGTGTCCATGGCAGGCGTCAAGTCGATGGCATACG
ACGAGGAGAAGAGCACGCTGACGGTGGTGGGGGAAGTGGACGTGGTGGTGGTCGTCGACGCGCTGCGCAAGGGGAAGCAC
CCGGCGACAGTGGTGACGGTGGGCGACGAGAAGAAGGAAGCGGAGGAGAAGAAGAAGAAGGAGGAAGAGGAGAAGAAGA-
-----AGAAGGAGGCCGAGGAGAAGAAGAAGAAGGAATGCCTGGAGAAGATGCAGAAGTGCTGCCCCAAGGCTTGCCCGC
CGCCACTCTACTGCCCCAAGGCTTGCTCGCCGCCACGCCACTGCCCGCCGCCACCCCGCTGCCCGCCGCAATCCTA---C
TGCTACGTCGACGACT---CCGGCCCCTGCACCATCGTGTGA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr3A_1_TraesCS3A01G268400
TCCGGTCGGCGTTTGTCCTCGGTGGATCTGACTGGATCCAGTCTTCGTTCGTCTGCGTCTGTGTGTCTGCAGCTCGCATC
CTTCCGGTCTATGCTTCTCTTCATCGGCGGCGGTTGCTGTTCTGGTGCACGACGACTTTCCGACTGTCTACTACAACAAT
GTTCGCCCGACTCCGACGAGGGAGGGGCAATGACGGCGGTGCGCCTTCGGCTCGCTCCAGTGCTTGTAGTCGTCGCTAGG
TGGTCTACGGACCTGGATGTAAATTTTATTTCTAGTGTTTTTTGTACTGCCTTGACAGTTGATGAATAGATCGAAAGTTT
TCTCGTAAAAAATAACTAATACGAACCAACTACTG---CATATATATGTTCGTTCCAGTA--CCCATA-------CCGTG
CTGTTTGTCGCAGTGGTATTAGTTGCCGACGTCTCC--CGTGACACC-GAGTCGTCTCCCCAGGTTGCTGGTTAGTCAAG
CACTAATAAAAAAAATATGACTATGCTAACCAGACAGCCACCACGGCCATAGCTATTA--TACTACCAATCCA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTGATGATTAGGCATATACTAATTCAACTTCCAACCA
GCTGTTAGAATAAGCACATGCTTAACTGCCGCCGTTCGTTGCAAA-----AAACGCACCAAATAGATGAGAAGGTACTGA
AAATCCCGGGACTTCTTTTT------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GCGGGTGT
TACATAATTCTCATCATGTCGACATCCGGTGGAGAGTCGGCTGAACACATCCGGGCTGCACACCTACTACTACGACTAGT
TACTGACTTA-AAACTTATTTCAAATCTCCTTGTAGAAACAGCAATATGAAATGCATTTGCATGAGTTGGTTTTGCACTG
TGGCAATGATTGTTGCAATTGACCGAGTCCAGAGTCCAAACCACCAAGGGA---------------------------GT
ATAAAGCCA-------GAGAGGAGGCTTTCGGGAGAGCTTGCATCCAGGCACATATACCAAGTACACCAATCAGCAACCT
TCAAGTATCCTAGTTTGATCTCGCCGCGAGCCCGTGAAGATGAAGGTTCTGCATGCTCTTAATTTCCTTCCTCCCAAGCT
TGTTTCTGAGATTTTATTGGTTAC------TCACCGTTTCTGTTATTCTGAACCAGATGGTGCTTAAGGTGCCGATGGTC
TGCAAGAAGTGCAAATCTTGCGTCCTTACGATTGTGTCCAAGGTCAAAGGTCTGTA-TATTCTCTCGCTCTATGGCCTTG
ATTCGCTCGT----CTCTATAACTTACTTGACAGGTCGTGTCGTGTGTGTCCATGGCAGGCGTCAAGTCGATGGCATACG
ACGAGGAGAAGAGCACGCTGACGGTGGTGGGGGAAGTGGACGTGGTGGTGGTCGTCGACGCGCTGCGCAAGGGGAAGCAC
CCGGCGACAGTGGTGACGGTGGGCGACGAGAAGAAGGAAGCGGAGGAGAAGAAGAAGAAGGAGGAAGAGGAGAAGAAGA-
-----AGAAGGAGGCCGAGGAGAAGAAGAAGAAGGAATGCCTGGAGAAGATGCAGAAGTGCTGCCCCAAGGCTTGCCCGC
CGCCACTCTACTGCCCCAAGGCTTGCTCGCCGCCACGCCACTGCCCGCCGCCACCCCGCTGCCCGCCGCAATCCTA---C
TGCTACGTCGACGACT---CCGGCCCCTGCACCATCGTGTGAGCGAGAGGGGAGATCATCGACCCGGC------------
--------GCCGATCGTTGTTGCCGGTGCAAATCAAGCCACTCCTCCAGGCCAGGCACACCAATTAATTCGTGCGTACGT
CTTGTTCATCGTTCAGAAGATTCAGAGCTTGCATGCACACTA-TTTTCTTTTCCTGTATCTTTTCCGGTTCCTGTGATCA
AGAATTGTATGTCTCCACGGAGACCTTCTTTTACTACTCACAA-------CTCGTCTACTTGCAATCTGCAAATGAGCTG
TTTGGTTCATGACCATGCGACGACTTGGATATAAGATTGGTGGTGGGGTTCTTAGCTTCACCTAATAATGTGACAAGTTG
ATTAGTCTACCGGTCGGCATTGCCAAATGGAACAGTTTATTGCAACAATTTGTCCCTATCGACGCTCGAACTTTCATATG
CCGTTGCCGATTGGTACCCTCCGGGAAACAAATTATTTCTGCAGATCACGCAATGATTCAGGTGCACTTTTACAATTCTC
CAACTTACCTCTTGACCATTGAAAAAAAAACACTCTTGAGACTTACTCCCTCCGTTTTTAAATATTTGTTTTTCTAGAGA
TTTCAACAAGTAACTACATACGAAACAAAATGAGTGAATCTACGCTCTAAAATATGTCTATATACATCCGTATATGATAG
TTCATTTGAAATCTCTAAAAAAATAAATATTTAGAAGCGGATGGAGTAGGAGCTAAGGGCATCTCCAGCCATTCGGTGCC
CTCAGGGACTGAAATATTGCCGTCTGGGGGCTAGCCGATGCTATTTCCACCGTGGGGGCGATTGGGTTCCCAACCGCCGT
CCCAAATTGATCCCAGACGCCATTTTTTGAAATCCAAATTCGGCTAGATTCA-TACAAAATGACACAAATTTGGACGAAA
TTCAGGCGGTTTTCATTGATATTTGTACAAAATTAAAGACATAACTTAAAAACTTAGAAAAATAAAACTACGCTGCCGCC
GCCGCCCCGAGCCTACTGCATGCCAAGGACC
>chr3B_338
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AATACGAACCAACTACTCCTACATATATATGTTCGTTCCAGTA--CCCATAGGCCATACCCTG
CTGTTTGTCGCGGTGGTATTAGTTGCCGACGTCTCCTACGTGACACCCAAGTCGTCTCCCCAGGTTGCTGGTTAGTCAAG
C-CTAATAAAAAAATAA-GACTATCCTAACCAGATAGCAACCACGGCCATAGCTATATACTACCACCAATCCATTTGGGC
CTCATTCGGTCTGAAGGATTTTCGTAGGAAAAACATAGGAAGAAGTATTTCAGAGGAAAATTTCTTATATATGCATTCGG
TTTGTAGGAAACACGTACATGAATTTCGTAAGAATACTACTCATTTTCTGTGTTTTTTGAAGGAAACTACACATCCACTC
AAAGCTCATTTTGCGCGTAGGAACGAGGCAAATCATTTTCTTAGGATGGCAAGTGACATCCTATCAAATTCCTATACTAC
TCCTAATTCATATGTTTTAATTTCTTCTAAACCGATTGAGCCCTTGATGATTAGGCATATACTAATTCAACTTCCAACCA
GCTGTTAGAATAAGCACATGCTTAACTGCCGCCGTTCGTTGCAAAAAAAAAAACCCACC-AATAGATGATAAGGTACTGA
AAATCTCGGGATTTCTTTTTGCACTTCTGCTTCGGTACACCCCCCCCCCCCTAAACACAAGGACGGCTCAGATTAGCCGA
TACCTCTTCATAAGTAAGGGCATGATAGTCATATTTTATAAACTCTTCACGTATATGCTAAACTTTTTTTTTTGAGAAAC
ACGTATACGCTGTACATGAATGGACGTCAACACCCTGCCGCGCTGGGTTAGCCCATTCAGACTTTTTTTAAAAACCGCAA
AAATTGGTGCTTGCTGCAGGATTCGAACCTACGTCCTCCTAGAATTAGCACAGCCGCACTAACCAACTAGCAAACCTAAC
GTCGGATGTTATGTAAATTTTTTAAAGCTTAAAATAGAACACTGGGAAAGCGCATCATTTTCTGCTTGGTATTTTCCTTT
TCTTTTTTGTTTCTTAAATGCGAGAACTTTTACAATTCGTGATTTTTTTAGAAAATGAAGACAAAATTTAAAATTCTAGA
ATTTTTCTTCCAAATCAGAGAACTTTTTTTTTAAAATTGATCAGTTTTCTTAACAAATTCGTGAACTATTTCGCAAATTG
GCGATTTCTTTTTGAAAACTGTTCAACTTTTTTTATAAAATTGACGAACTTTGTTTCTAAATCAATGATTTTTTTTCAAA
TCAATGCACTTTTCTTTAAAATCGATAAACTTATTCTGAATTTTTGATGAAATTTTTTCAAAATCAATAAAAGAAACAAA
AAAACAAAAGAAAAACAAATCAATATAAAAAACCCATGTAAAAACCAAAGAAAAAACCAGCCCGGTTGAAAAGGAAAACC
AGAGTCTTTCTTTTTAGCGTTATATTTGATGCACTACAAAAGATGGAAAAAGAAAAGCTTAGACCATGATAATCAGAGGT
GTTCGAGTAGGCGAGATGGCTCCGTCTAAGAGCACGTCATTTTCCGACATCCTTGAAATGGCACCAATTATTTTTTCATG
CCTTCTATGACCAATTCAAGGCACCATGCCAAGTTGTTTTGGTTTTCGACAAGTTTTGCATTTTTCAGGGTTTTCTCCGT
AAAAAAAGCCTGATAAATGGGCGGACGTGTCCCAACTTGCATACAGTGTCATGAATCGTTCAAACCTGGCATGGATGACT
ACCATGGTCATGCCCACCTGCTCGAAAATGTTGGGGTCATTTTAAGAATGTCCAAAAGTAGACCATGTTTAATGGAGGAT
GTTCGGGTTGGCTAGAACACTCTACCTGAGGATACAGTGTTTCTCAACATCCTTCAAATGGCCTAATTTTCCCCCCTCCT
TCTATGATCAAATCAAGGCACCATGTCAAGCTATTTAATTTTTTGATAATTCTTGCATTTTCTAGAGTTTTCTCGAAGAA
AACTGGCTGATAAATGGCCGGACGTGACATAACATGCATATGGTGTGGGAAATTCATTCAAAACTAGACCATGTCCATAT
TTTTCTATTTTTTCTGGAATTCCAAATTTGTTACTGTTTTTCAAAAAAAATCTTCATGTTTACATTTTATTCTTTTATAA
AAAAACTGTTCGTGTTTTGACATTCTGAGCAAGTTTGAAAGGCATGATTTTTTTTAAAATTTATTTACAATTTTTAAAAA
ACAAATATTAGTATTTTATGAACAAAACAGGAAAACTAGAAACCCTAACTAAAACCGTGCAAAAAAAGAAACATAAACCA
AAGAGTGAAGGTGCTTTTTTTTCCTTGGCGTTATCTCTCTAGAACAAGAAGAAGAAAACATGCGTAGTAGTAAAATCAGA
TGTAGTTCTTGAGGGCTGTAGTTCGAATCTGGAAGAGGACATTCTTTTTTTGATTATTATAAAACTAAAAAGCGCATGTG
AGGGCTGTTCGCCGGGTATTATACGAACCTACAGTGTATATGTAGAAACGTGAGTATAATTTATGAAAAGTTCATACTAC
CCTTTATACGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGAGGGGGAGGGGGTGTACCGAAGCATTGCTCTTCTTTTTGCAGGTGT
TAGATAATTCTCATCATGTCGACATCCGATGGCGAGTCGGCTGAATACATACGGGCTGCACACCTACTACTACGACTATT
GTACTGACT-TAAACTTATTTCAAATCTCCTTGTAGAAACAACAATATGAAATGCATTTGCATAAGTTGGTTTTGCACTG
CGGCAATGATTGTTGCAATTGACCAAGCCCAGAGTCCGAACCACCAAGGGA---------------------------GT
ATAAAGCCACCCATTGGAGAGGAGGCTTTCGGGAGAGCTTGCATCCAGGCACATATACCGAGTACACCAATCAGCAACCT
TCAAGTATCCTAGTTTAATCTCGCCGCGAGCCCGCGAAGATGAAGGTTCTGCAGGCTCTTAATTTCCATCCTCCCTGGCT
TGTTTCTGAGATTTTATCGGTCACTCACAGTCACCGTTTCTGTTATTCTGAACCAGATGGTGCTTAAGGTGCCGATGGTC
TGCAAGAAGTGCAAGTCTTGCGTCCTTACGATTGTGTCCAAGGTCAAAGGTCTGTAATATTCTCT----CTATGGGCGTG
ATTCGCTCGTCCTCCTCTGTAACTTACTTGAAG------GTCGTGTGTGTCCATGGCAGGGGTCAAGTCGATGGCATACG
ACGAGGAGAAGAGCACGCTGACGGTGGTGGGGGATGTGGACGTGGTGGTGGTCGTCGACGCGCTGCGCAAGGGGAAGCAC
CCGGCGACGGTGGTGACGGTGGGCGACGAGAAGAAGGAGGCGGAGGAGAAGAAGAAGAAGGAGGAAGAGGAGAAGAAGA-
-----AGAAGGAGGCCGAGGAGAAGAAGAAAAAGGAATGC---------ATGCAGAAGCACTGCCTCAAGGCTTGCTCGC
CGCCACTCTACTGCCCCAAGGCTTGCTCGCCGCCACGCCACTGCCCGCCGCCACCCCACTGCCCGCCGCAATCCTA---C
TGCTACGTCGACGACT---CCGGCCCCTGCACCATCATGTGAGCGAGAGGGCAGATCATCGACCCGGCGCCGCCGTA---
TATATACAGCCGATCGTTGTTGCCGGTGCAAATCAAGCCACTCCTCCAGGCCAGGCACACCAATTAATTCGTGCGTACGT
CTTGTTCATCGTTCAGAAGATTCAGAGCTTGCATGCACATTATTTTTCTTTTCCTGTATCTTTTCCGGTTCCTGTGATCA
AGAATTGTATGTCTCGACGGAGACCTTCTTTTACTACTCACAAGTCACAACTCGTGTACTTGCAATCTGCAAATGAGCTG
TTTGGTTCATGGCAATGCGACGACTTGGATATAAGATTGGTGGTGGGGTACTTAGCTTCACCTAATAATGTGACAAGTTG
ATTACTCTACCGGTCGGCATTGCCAAATGGAACAGTTTATTGCAACAATTTGTCCCTTTTGACGCTGGAACTTTCATATG
CCGTCGCCGATTGGTACTCTCCGGGAAACAAATAATTTCTGCAGATCACGCAATGATTCAGGTGCACTTTTACAATTCTC
CAACTTACCTCTTGACCATTGAAAAAAGAACACTCTTGAGACTTACTCCTTCCGTTTTTAAATATTTGTCTTTCCAGAGA
TTTCAACAAGTGACTACATATGCAGCAAAATGAGTGAATCTATACTTTAAAATATGTCTATATACATCCGTATATGATAG
TTTATTTGAAATCGCTAAAAAGACAAATATTTAGGAGCGGAGGGAGTAGGAGCTAAGAGCATCTCCAGCCGTTCGGCGCC
C-CAGGGACTGAAATATCGCCGCCTGGGGGCTAGCCGGCGCTATTTCCACCGTGGGGGCAATTGGGTTCCCAACCGCCGC
CCGAAGTTGGCCCCAGATGTCCTTTTTTGAAATCCAAATTCGGCTAAATTTTGTACAAAATGACACAAATTTGGGCGAAA
TTTAGGCAGTTTTCATTGATATTTGTACAAAATTAAAGACGTAACTTAAAAACTTAGAAAAATAAAACTA---TGCCGCC
GCCGCCTCGAGCCTACTGCATGCCGAGGA--
>chr3D_338
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------AATACGAACCAACTACTG---CATATATATGTTCGTTCCAGTACACCCATA-------CCGTG
CTGTTTGTCGCAGTGGTATTAGTTGCCGACGTCTCCTACGTGACACC-AAGTCGTCTCCCCAGGTTGCTGGTTAGTCAAG
CGCTAATAGAAAACTAA-GACTAT-CTAACCAGACAGCAACCACGGCATAGCTG--TA--TACTATCAATCCAT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTGATGATTAGGCATATACTAATTCAACTTCCAACCA
GCTGTTAGAATAAGCACAATCTTAACTGCCGCCGTTCGTTGCAG-----AAAACGCACC-AATAGATGATAAGGTACTGG
AAATCCCGGGACTTCTTTTT------------------------------------------------------------
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------------------------------------------------------------------------GCGGGTGT
TACATAATTCTCATCATGTCGACATCCGATGGAGAGTCGGCTGAATACATACGGGCTGCACACCTACTACTACGACTAGT
TACTGACTTATAAACTTATTTCAAATCTCCTTGTAGAAACAACAATATGAAATGCATTTGCATAAGTTGGTTTTGCACTG
TGGCAATAATTGTTGCAATTGACCAAGTCCAGGGTCCAAACCACCATGGGCATTATGTTCTACATGGTCCTCACTTGTGT
ATAAAGCTAGCCATTGGAGGGAAGGCGTTCGGGAGAGCTCGAGTACAGGCGGATATACCAAGTACACAAATCAGTAATCT
TCAAGCATCCTAGTTTAATCTCGCCGCGATCCCGCGAAGATGAAGGTTCTGCATGCTCTTAATTTCCCTCCTCCCTGGCT
TGTTTGTGAGATTCTATCGGTCAC------TCACCGTTTCTGTTATTCTGAACCAGATGGTGCTTAAGGTGCCGATGGTC
TGCAAGAAGTGCAAATCTTGCGTTCTTACGATTGTGTCCAAGGTCAAAGGTCTGTA-TATTCTCT----CCGTGGCCTTG
ATTCGCTCGT----CTCTGTAACTTACTTGACACC-----TCGTGTGTGTCCATGGCAGGGGTCAAGTCGATGGCATACG
ACGAGGAGAAGAGCACGCTGACGGTGGTGGGGGATGTGGACGTGGTGGTGGTCGTGGACGCGCTGCGCAAGGGGAAGCAC
CCGGCGACGGTGGTGACGGTGGGCGACGAGAAGAAGGAGGCGGAGGAGAAGAAGAAGAAGGACGAAGAGGAGAAGAAGAA
GAAGGAGAAGGAGGCCGAGGAGAAGAAGAAAAAGGAATGCCTGGAGCTGATGCAGAAGCACTGCCCCAAGGCTTGCCTGC
CGCCACCCT------------------------------ACTGCCCGCCGCCACCCCACTGCCCGCCGCAAACCTACAGC
TGCTACGTCGACGACCACCCCGGCCCCTGCACCATCGTCTGAGCGAGAGGGGAGATCATCGATCCAGCGCCACCGTACCA
TATATACAGCCGATCGTTGTTGCTGGTGCAAATTAAGCCACTCCTCCAGGCCAGGCACACCAATTAATTCGTGCGTACGT
CTTGTTCATCGTTCAGAAGATTCAGAGCTTGCATGCACATTA-TTTTCTTCTCCTGTATCTTTTCCGGTTCCTGTGATCA
AGAATTGTATGTCTCGACGGAGACCTTCTTTTACTACTCACAA-------CTCGTCTACTTGCAATCTGCAAATGAGCTG
TTTGGTTCATGACAATGCGACGACTTGGATATAAGATTGGTGGTGGGGTACTTAGCTTCACCTAATAATGTGACAAATTG
ATTAGTCTACCCGTCGGCATTGCCAAATGGAACAGTTTATTGCAACAATTTGTCCCTATTGACGCTGGAACTTTCATATG
CCGTTGCCGATTGGTACTCTCCGGGAAACAAATAATTTCTGCAGATCACGCAATGATTCAGGTGCACTTTTACAATTCTC
CAACTTACCTCTTGACCATTGAAAAAAAAACACTCTTGAGACTTA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS---------------------------------------------------------------
------------------------------------------------S-------------------------------
-S------------SS-S------S-------------S-----------------------------------------
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-----------------------------------------------------------S---------S----------
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----------------------------S----------------S----S-----------------------------
-----------------------------------------S---------------------S----------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-----------------S--------------------------------S-------SS---
-----------------S---S----------------------------------------------------------
-----------------------------------------------------------------SSSS-----------
------------------S--------------SSSSSS---------------------S-------------------
----------------------------------S---------------------------------------------
--------S-----------------------------S-----------------------------------------
------------------------------S---------------SS----------SS--------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
---------------S----------------------------------------------------------------
-------------S-----------------------------------S------------------------------
-----------------------------------------------------------S------S-------------
-----------------S---------------S----------------------------------------------
-------------------------------------------------S-------------------S----S-----
-----------S--------S-S-S-----------------SS--S---------------------------------
--S----------S-------S-S----------S------S---------------S------------S-----S---
-S---------------S----S--------------SS--------------------S-------------------S
--S--S---SS------S-S-S------------------------S---SS----------------------S-----
--S----S--------------------------------S-----------------------------SSS-------
------S-----------------S----SS
>forward_233
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-----------------------------------------------------GCTCCAGTGCTTGTAGTCGT-------
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>reverse_3796
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-----------------------------------TCGTGTCGTGTGTGTCCATG-------------------------
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--------------------------------------------------------------------------------
-------------------------------
>forward_235
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TCCAGTGCTTGTAGTCGTCG-----
--------------------------------------------------------------------------------
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>reverse_3821
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------------------------------------------------------------CGTCAAGTCGATGGCATACG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_246
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TAGTCGTCGCTAGG
TGGTCT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_3959
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--------------------------------------AGCGGAGGAGAAGAAGAAGA----------------------
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--------------------------------------------------------------------------------
-------------------------------
>forward_248
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GTCGTCGCTAGG
TGGTCTAC------------------------------------------------------------------------
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>reverse_4620
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-----------------------------------------------------------CGACGCTCGAACTTTCATATG
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
