>input_sequence_73874
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----------------------------ACGCAAGAAAGCGG---CTTCCTAATCTTGTGAGGCTGACCTAGGCGAGAGC
CAGCTTAGAGCTATGGGTGGGAAAGGTGGCGGAGGTGGTGGTGGTGGAAAGGGAGGAGGAGGAGGTGGCGGGAAGGGTGG
AGGTGGAGGCAGCGGTGGCAAGGGCGGAGGGGGAGGTGGAGGCGGCGCGAGGAGCGGC------GGAGGAGG---TGGAA
AAGGTGGTGGAACCGGAGGAGGGTCTGCCAAGTCCGGCGGCGGGGGCGGGCACGTTGGGATGGGGAAGTCAGGCGGCGGC
GGCGGGGGAGACGGCATGATGAGGGCCCCCGGCGCCGACGGCTACATCGCCCGCTCCGGCTTCGAGGCCAACCCCCAGGG
CTACTTCGCGGGTCTCCACCACGGAGACGCCGCCAAGTAGAGACGTTCTACTGCATCAGCTCCTGTGTCAGCTAGGCTGC
CGCCCCTGGTCACTAGTGTTGATCAATGTTTGTAGCTACTCCAATAATGTATAGACTGCCCGCGTGAGAACAGCCTAGCT
AC-----TTTATCTTGTAATCC-AAGTCGATCGATCTGACAGTTAGCTAGTAACGCAATGCATGATGAGATCGACGCTTG
TACCTCTAATA--AGTGAATGTACG---TCCC------------------------------------------------
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>chr7D_1_TraesCS7D01G405600
TGCAACCTATTCATGTTTAATAAATTGACTTTGTTATGGAGTATTTCAGGAACTTCATTTCGCTTGAGAGATAGTGGAGT
TTCTTGTTTCAACATGTACATCAACAAGGGTGTCGGTGGCTTGAGTACCATTTTCTAATTATATGAACATCTTTTTAAAA
TGCATTGAAGACTTTTTTTTAGAAATTACATGAACCTTTTTGAAAAATGGCCAAACATTTTTT-AATTACATGGAAATTT
TTGTTAATAAATGATCACTTCTAATTATATTAACTTTTGGAAAATGCACGAAATACTTGAATTACATG--CATATATTTA
ATAATCTGTAAAATACCTTTAT-AATTACATGAAGAA----AATAAAATAAACATGTGATTTTTTTAAAGTAGATAAACA
TTTTGTAAATACATGAATGCTGTAAAAAA-TACTTTAACATCTTTTTTAAAATATATGAACGCTTTAAAAAGATACATGT
GCAATTTTAGAAGCACATGAATGGCTGGAATATTTTCTAGACATACTTC-TTTCACTCTTTGTACTTCTAAATAATTATA
TATAAATCAGCAGTATATCTTTTCAGGATTTGGTAGAAAAAACAGTATGCCGCACTGGTCGCAGCCCCGGCCCCTAACTG
CCACTC-AGATGTGACTGTAGCAGTTGGATTGGGCCTGCCCAGCTGCAGCTTTTCCAAGCGGGCTGGGCAGCGAGTAAGG
CTCACGTAGCGGCATTCTGGACCGCGCGGGGA-------------GAGCAACGGTTAAC---------------------
--------------AAAGTCGAGCCAAAGATCTCGCGGATATGCATACTCGTGGCTTTCGAGGTGAGCTCTCCGGAGCTT
GGCTGGCCGGAGTCAGTGAAAGTCAGGAATATCTTCGTGCACGGGCATGCAGCGCTCGAACGTGTCCCGCCATGCGTCGC
--------CGCGCATGCCGTTTCGAC-GCTTGCCCGCCGCTTCCCACGTCCACGGTAAACATCGACGTTTCCACTATAAA
AGAGCACTGCACTACGCAGCATTCCCTCACGCAAGAAAGCGG---CTTCCTAATCTTGTGAGGCTGACCTAGGCGAGAGC
CAGCTTAGAGCTATGGGTGGGAAAGGTGGCGGAGGTGGTGGTGGTGGAAAGGGAGGAGGAGGAGGTGGCGGGAAGGGTGG
AGGTGGAGGCAGCGGTGGCAAGGGCGGAGGGGGAGGTGGAGGCGGCGCGAGGAGCGGC------GGAGGAGG---TGGAA
AAGGTGGTGGAACCGGAGGAGGGTCTGCCAAGTCCGGCGGCGGGGGCGGGCACGTTGGGATGGGGAAGTCAGGCGGCGGC
GGCGGGGGAGACGGCATGATGAGGGCCCCCGGCGCCGACGGCTACATCGCCCGCTCCGGCTTCGAGGCCAACCCCCAGGG
CTACTTCGCGGGTCTCCACCACGGAGACGCCGCCAAGTAGAGACGTTCTACTGCATCAGCTCCTGTGTCAGCTAGGCTGC
CGCCCCTGGTCACTAGTGTTGATCAATGTTTGTAGCTACTCCAATAATGTATAGACTGCCCGCGTGAGAACAGCCTAGCT
AC-----TTTATCTTGTAATCC-AAGTCGATCGATCTGACAGTTAGCTAGTAACGCAATGCATGATGAGATCGACGCTTG
TACCTCTAATA--AGTGAATGTACG---TCCCTGTTAATTAATCGTGCGCGTGCTGGTTTTCCAGATGCATCTGTAATTC
TGTAT----GTGTT-GTATCTCGCAAAAAAATAAAAAAATCTGTATGTGTTGCACGCAAAC-------------------
---------AAATTCTGTGTTTTTGATAGAAGGCGAATGGCTCTGTAACG----TAC-----------------------
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-----------------GTAAATTTTCTTTGCGAATGACGTGCGTCTACTGCACAAGGTTGTGAAGCTGGCGCATGTTGA
GATGGATTCGGCATTTCGGCTACAGCGAACGGGTGAAGATTGTTCGCCTGGCTTGCTGGTTGTTCTATTTTCGTGTCCTA
CAGTCTAGTCCAAAAATTCTGTTGTTCTGAGCAC----------------------------------------------
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-----------------TTACCGTAGGAGAGAGTCACGGTCAAATAGCAGTTTTGAAATCGCACCAATACGTGCCACACT
CGTTGATTCCTAGGCGTGTTCTTCGTTGTTTGGCCGGAGTAATTCTCCCTCCTCGGGTTCATCTACAAGCATGGGTTTGA
GCCAAATAATTGGATTGACATTGTGTCAAATATTGACTACTAATTGGTTGGTTATCAAGTTGTTTTGTCTATCTCATATA
GTGTCAATATTTGACAATGCCAATATTTAGCTAGCCAAATATTGATAGCTCATGCTCGAAGTGCTCCACCGTGCGAGGCA
TTGAGTGTCCGCCATCGGTCTTGCTGCCGTTTAGTACTATCTTAGCGGATCCGCTAGAGATACCCTCAAACACTAAAGAC
ACAATGTTACATAAATTTGACTATAATGTAGTTAAAAAATATGTGGATCAAAACTGCTCGCCTGACTTTTGGTTCGCTTT
CTCATTTTCATTTTTTAATATTTTAAAATTAACTAATATTTTCTAAATTTATGAACACTTAAATTCGTGAACTCTTAGCA
AATTCACAAAATATTTAAATTCATGATCATTTTATATCATGAACATTTAAAGAAACATGAACATTTTTTGATTTAACCAA
CTTCGTCAAACCACCAAGAAAATATAGCCGGTTTTTTCAAAGCCAGCAAAAT
>chr7A_1
TGCAGCCTATTCTTGTTTAATAAATTGACTTTGTTATGTAGAACTTCAGGAACCTCATTTCGTTTGAGAGATAGTGGAGT
TTATTCTTTAAACATTTACATCAACGAGCGTGTCGGTGGCTTGAGTACCATTTTCTAATCATATGAACATCATTTTAAAA
TTCATTCAGCACATGTTTT-AGAATTTACATCAGCAATA-TGAAAAATGGCCAAACATTTTTT-AATTACATGA------
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----------------------------------------------------------AACACTTTAAAAAGATACATGT
GCAATTTCAGAAGCACATGAATGGCTGGAATATTTTTTAGACATACTG-TTTTTACTCTTTGTACTTCTAAATGATTATA
TATAAATCAGCAAAATATCTTTTCTGGATTTGGGAGAAAAAACAGTATGCCGCACTGGTCGAAGCCCCGTCCCCTAGCTG
CCACTC-AATGA-GACTGTAGCAGTTGGATTGGGCCTCCCCAGCTGCAGCTTTTGCGAGCGGGCTGGGCAGCGAGAAAGG
ATTACGTAGCGGCATTCTGGACCGCGCGGGGAATCCTTGACAAGAGAGCAACGGTTAGCGTATCTCTAGGCAGCTTTGTT
CTTAAAAAAAAATTAAAGTCGAGCTAAAGATCTCGCGGATATGCATAGTCGGGGATTTCGAGGTGAGCTCTCCGGAGCCT
GGCCGGCCGGAGTCAGTGAAAGTCAGGCATATCTCCACGGACGGGCATGCAGCGCTCGAACGTGTCCCGCCATGCGTCGA
CCGGTCGACGTGCATGCCGTTTCGATTGTTTGCCCGCCGCTTCCCACGTCCACCGTAAACATCGACGTTTCCACTATAAA
TGAGCACTGCACTACGCAGCATTCCCTCACGCAAGAGAGCGGCTCCTTCTTAATCTTCTGAGACTGATGGAGGCGAGAGC
CAACTTAGAGCTATGGGTGGGAAAGGTGGCGGAGGTGGTGGCGGTGGAAAGGGAGGAGGAGGAGGTGGCGGGAAGGGTGG
AGGCGGACGCAGCGGTGGCAAGGGTGGAGGGGGAGATGGAGGCGGGGCGAGGAGCGGC------GGAGGAGGAGGTGGGA
AAGGTGGTGGAATCGGAGGAGGGTCTGCCAAGTCCGGCGGCGGGGGCGGGCACGTTGGGATGGGAAAGTCAGGCGGCGGC
GGCGGGGGAGACGGCATGATGAGGGCCCCCGGCGTGGACGGCTACATCGCCCGCTCCGGCTTCGAGGCCAACCCCCAGGG
CTACTTCGCGGGTCTCCACCACGGAGAGGCCGCCAAGTAGAGACGTTCTACTGCATCAGCTCCTGTCTCAGCTAGGCTGC
CGCCCCTGGTCACTAGTGTTGACCAATGTTTGTAGCTACTCCAATAATGTATAGACTGCCCGCGTGAGAACAGCCTAGCA
AGCTACTTTTATCTTGTAATCC-AAGTCGATCGATCTGACCGTTAGCTAGTAACGCAATGCATGATGGGGTCGACGCTTG
TACCTCTAATATAAGTGAATGTA---CGTCCCTGTTAATTAATCATGTGGGTGCTGGTTTTCCAGATGCATCTGTAATTC
CTATGTGTTGTAGGAGTATCTCGCAAAAAAT----AAATTCTGTATGTGCTGTGCACGCAAGCAAATT------------
----------AATACCGTGTTTTTGATCGAAGGCGAATGGCTCTGTAACG----TACTCCCTCCGTTCCGAAGTTCCGAA
TTACTTCTCTTAGATACGGAGGTATCTGGCACTAAAATAAGTCTAGATACGGATACTAAAATAAGTCTAGATACATTCGT
ATCTAGACAAATCCAAGACAAGTACTCTCTCCGTCTCAAAATTCTTGTCTTAGATTTGTCTAGATGCGGATATATCTAAT
ACTAAAACATGATTTGATATATACGTATTTAGATAAATTTAAAATAAGAATTTTGGGACAAATGGAGTAATTCGAAACGG
AGGGAGTACGTACGTGTGTAAATTTTCTCTGCGAATGACGTGCGTCTAGTGCAGAAGGTTGTGAAGCTGGCGCATGTTGA
GATGGATTCGGCATTTCGGCTACACGAACGGG--------------------TTGCTGGTTTTTCTAGTTTCGTGTCCTA
CAGTCTAATCCAAAAATTCTGTTGTTATGAGCAC----------------------------------------------
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-----------------TCACCGTAGGAGAGAGTCGCGGTCAAATGGCAGTTTTGAAATCGCATCAATACGTGCCACACT
CGTTGATTCCTAGGCGTGTTCTTCGTTGTTTGGCCAGTGTAATTCTCCCTCCTTGGATTCATCTACAAGCATGGGTTTGA
GCCAAATATTGGTTTGA---------------------------------------------------------------
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>chr7B_6
-----CCTATTCTTGTTTAATAAATAGATGTTGTTATGTAGAACTTCAGGAACCTCATTTCGTTTGAGAGACAGTGGAGT
TTCTTCTTTCAACATGTATATCAACGAGGGTGTCGGTGGCTTGAGTACCATTTTCTAATTATATGAACATCTTTCGAAAA
TGCATTGAACACTTTTTTT-AGAAATTACATGAACAATTTTTAAAAATGGCCAAACATTTTTTTAATTCCATGGAAATTT
TTGTTAATAAACGACCACTTCTAATTATATTAACTTTAAAAAAATGTACCAGACACTTAAATTACTTGCACATATGTTTA
ATAATCTATCAAATACCTTTATTAATTACATGAATTTATCTAAAAGAAAAATTATGTGAAAATTTTAGAGTAGGTAAATA
TTTTGTAAATACATGGATGCTTTAAAAAAATACTTTAACATCTATTTTAGAAAATATGAACACTTTAAAAAGACATGTGT
GCAATTTTGGAAGCACATGAATGGCTGGAATATTTTT-AGACATACATTTTTTTACTCTTTCTACTTCTAAGTAATTATA
TATAAATCAACAAGATATCTTTTCCGGATTTGGGAGAAAAAAAAGTATGCCGCACTGGTCGCAGCCCCGGCCCCTAGCTG
CCACACAAATGA-GACTGTAGCAGTTGGATTGGGCCTGCCCAGCTGCAGCTTTTCCGAGCGGGCTGAGCAGCGAGTAAGG
CTCACGTAGCGGCATTCTGGACCGCGCGGGGA-------------GAGCAACGGTTAAC---------------------
--------------AAAGTCGAGCTAAAGATCTCGCGGATATGCATACTTGTGGCTTTCGAGGTGAGCTCTCCGGAGCTT
GGCTGGCCGGAGTCTGTGAAAGTCAGGCATATCTTCGTGCACGGGCATGCAGCGCTCGAACGTGTCCCGCCATGCGTCGC
--------CGTGCATGCCGTTTTGACTGCTTGCCCGCCGCTTCGCATGTCCACGGTAAACATCGACGTTTCCACTATAAA
AGAGCACGACACTACGCCGCATTCCCTCATGCAAGAGAGCG---------------------------------------
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>chr7B_1015
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---------------------------------------------CTTCTTAATCTTCTGAGACTGATCGAGGCGAGAGC
CAACCTAGAGCTATGGGTGGTAAAGGTGGCGGGGGTGGTGGCGGTGGAAAGGGCGGAGGAGGAGGTGGCGGCAAGGGCGG
AGGCGGAGGCAGCGGTGGCAAGGGCGGAGGGGGAGGGGGAGGCGGGGCGAGGAGCGGCGGCGGGGGAGGAGG---TGGAA
AAGGTGGTGGAACCGGAGGAGGGTCTGCCAAGTCCGGCGGCGGGGGTGGGCACATTGGGATGGGGAAGTCAGGCGGCGGC
GGCGGCAGAGACGGCATGATGAGGGCCCCCGGCGCCGACGGCTACATCGCCCGCTCCGGCTTCGAGGCCAACCCCCAGGG
CTACTTCGCGGGTCTCCACCACGGAGACGCCGCCAAGTAGAGACGTCTTGCTGCATCAGCTCCTGTGTTAGCTAGGCTGC
T---CCTGGTCACTAGTGTTGACCAATGTTTGTAGCAACTCCAATAATGTATAGACTGCCCGCGTGAGAACAGCCTAGCA
AC-----TTTATCTTGTAATCCCAAGTCGATCGATCTGAACGTTAGCTAGTAACGCAATGCATGATGAGATCGACGCTTG
TACCTCTAATA--AGTGAATGTACGTCGTCCCTGTTAATTAACGGTGTGCGTGCTGGTTTTCCAGATGCATCTGTAATTC
TGTATCTACGTGTT-GTATCTCGCAAAAAAT----AAATTCTGTATGTGTTGTGCACGCAAGCAAATACCGTGTTTTTTT
TTTGAGGGTAAATACCGTGTTTTTGATCGAGGGCGAATGGCTCTGTAACGTACGTAC-----------------------
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-----------------GTAAATTTTCTTAGCGAATGACCCGTGTCTACTGCAGATGGTTGTGAAGCTGGCGCATGTTGA
GATGGATTCGGCATTTTGGCTACACGAACGGG--------------------TTGCTGGTTGTTCTATTTTCGTGTCCTA
CAGTCTAATCCAAAAGTTCTGTTGTTCTAAGTACTTAGCAGCGTCACGCAGTGGCGGAGTTAGGATTTAAAAACAGGGTG
GTCCAACTCTAAATTCTTTTGACAACAAATATAGCATGTGAACGATGTAATTAATTAACCAGTAGCACATAGAAATAGAT
TAATATGTTCTTAGAGACATACTAAAATTCTCAATTAAGTGTCAGTTTGGCATAAAAGAAGTCTACATAATACATACCTT
GAGAAATTTAAAGAAGCATGTCTCCGAAAAAGAGAAGCAATGTCTCCGGTCCTCTTCACTCTTTAATAACTCTGCAATAA
TAATTTGTTTACTTTTTTATCATAAGTTCATAACCAGTAAATTCAAATTTGTGTCATGTAGACAATTTGCTTGTTTCTGA
ATATGAACCTAAATTATATACCTGTAATTTTTTTTGAAGGTCAATATACTTGTAATTTAAATTTGTATCATGTAGACAAT
TTGCATCTTTCTGAATATGGAACTACATTATATTCAGAAATTTCCAATTGTAGCTTCGGTGTCCAATATATCCAATGGAC
AAGCGAAAGAAAAAAAACATTGTTGTTTTGAGCATCCTCATACAGCCATATACAAGGATTCAGCCAGACCTGCTTGCAAG
TCCAAATGGTTGGTGGTGGCGTAGACATGGGCACGGCCATGGCCGGCGGTGGCCATGCCAACGAAACGCGATGCAAGCAA
CCAGTTTGCGAGAACAGAGAGCGAGGAGTAAAAGGACAACGGCGGTCCGGTCAGCGTTGACAGGAGGAAGAAGGGTCCTG
CTTGCCGCTCTGAATCCGTTGTCCGAATGAAGGATGGGAGGTATAGGAGCAGGCCTCGGTCACAAATACAGCAAGGGAAC
CGGGGAAGACGAAGGCACACTGCTCGTCGGGCGGTGCTCTGCCGGAGCCGAGGAAGACCGGTGCGGGAGCTCGATTCACT
GCGGCACTACACTGAATCGTCCATGAAAAGCGTCAGAGAGACGATGAGCTCGTTGGGTGGGGCAGGCCGCGGTGGCTCCT
GGCGTTGGCTACGGGAGACGACGACTCGCCGAGGCAAACGACTGGCGGCGGATCGGAACGCGTAGAAGTGGAGCAGGGAA
TCGACCCGATGACGCCCCTCCTGTCATATAATTGAGTAGGTTGTCGCTGGGCCTTTCTTTTCTCCAGCCCATGACCGAAT
ATCCTATGACATACGGCCCGACCCAAAATTCCAGAGTGGGCCGCGGCCCACCCTGGACACCCTGTAGCTCCGCCCCTGGC
GTCAGGACTGAGCAGCGTTACCGTAGGAGAGAGTCACGGTCAAATAGCAGTTTTGAACTCGCCCCAATACGTGCCACAGT
CGTT----------------------------------------------------------------------------
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>SNPs
----S-------S-------------------------S--S-S---------S--------S-----------------
-----S-------------------S------------------------------------------------------
---------S---------S---------------SS-------------------------------------------
-----------S--S----------------------SSS------S--S-S-S----S------S---------S----
-------S-S------------------------SSS------S-S--S--SS------SSS-----S-----S----S-
---------------S-----S---------------------S-----S--S--------S------------------
------------------------------------S-----------S----S--------------------------
------------SS----------S--------S------------------------------------------S---
--------SSSSS-------------------------------------------S-----------------------
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------------------------S-------------------------------------------------------
---------------------------S----------------------------------------------------
----------S---------------------------------------------------------------------
------------------------------------S------------S-------S----S----S-S----------
--S--------------------------------------S--------------------------------------
---S-----------------------------------------S----------------------------------
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----------------------S--------------------------------------------------------S
----------------------------------------S---------------------------------------
-----------------------------------------------S--------------------------------
------------------------------SSSSS---S-------------SS-S-SS-S-------------------
-------------S-S-----------S----------------------------------------------------
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-----------------------------------------------------S--------------------------
------------------------SSS-SS--SSSSSSSSSSSSSSSSSSSS----------------------------
-------S------------------------------------------------------------------------
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-----------------------------------S-S---------------S--S-----------------------
--------S-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_652
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-----------------------------------------------------------------------CCCCTAACT
GCCACTCAGATG--------------------------------------------------------------------
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>reverse_2274
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---------------------------------TGAAGATTGTTCGCCTGGCT---------------------------
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