>input_sequence_73865
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-------------------ATGGGGGAGCACGCGTACGACCACAGCAGCAGCAGCGGGGGCGGCATGAGCCCGTCGACGC
CGCCGGTGCAGCAG---C---------GCAGGGGCCTCTCCCGCCACGCGACGGCGCCCAGGGCCACCACAACGCGGCCG
GCGATAAGGATCATCCACATCATCGCGCCGGAGATCATCAAGACCGACGTCGACAACTTCCGGGACCTCGTGCAGCGCCT
CACCGGGAGGCAGCACCACCAGCCGGCCGACGTCACGGCGAACGACCGCGC---------GGCAGTGACGGTGGGCGTGG
CGACCACGCCGCCGTCGCCCGTAGAGGAGAAGCCGCAGCCGCAGAAGAAGAGGCTGGCACCAGCGCCGGCGCTGGCGGAC
GATTTCGTGGCGCAGCAGGAGAACAAGAGGAGGAAGAAGATCAAGTGCGAGGTGGTGAAGGTGGAGGAAGGAGGGTTGGG
CTACGGCGGCGGCGAC---CTCGACTTCAGCGAGCTGTGGATGGATCTCAACCCCGGGGGCTTCCTGAGCTTCTTGGAGG
AGGACGTGTTCCAGGGGATGA---TGGCTCCTGACCTGCTGCAGCAGCCGCTGGGGGCG------CCGAGGATGGATTTA
GTTGGTGAAATGTGCGCCTCCTTTCTGGCTTAG-----------------------------------------------
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>chr7A_1_TraesCS7A01G401900
TAAGATTGCTAAGTTTAGTTTCGATTGCTAAGTTTAGTTTCGATAATAGGTCGGACAACTTTCATTTTAATAGTGTTCCG
CCCTGCATGGCGTATGCTGCAATGAGCGATTGTACGAGCATTTTAAGTTGGTTAATATATGGGGTTTTTTAAGAAAAAGA
AACGCCGTCACCCGCCTGTGTGCCGCACCTGCAAGGAATAAAAATCTCTAATCTAAAGTACTAACCGAAGAGAAGGCACC
TGGATTCTCTTCCCCGCCACCGGCCGTCGGAGCGGCAGGCGAAGGGTTTGTGAATCCACAAGCTCATCGGTGAAACCTGC
GGCGTATAATTAACATGTTCCCCCTCGTCCAGACCCATCGCAAGGAAAGCGAAAACCTAGATTTGCTTTATCGGGTATCA
AACGGGAACTCCGAGCAAATAAAACACATTTCAAAAGAAGTCTGGAGGAAAGAGATTGTCATAGCCGCCTAGTATTAGAA
ACATAGTGGATCATAGCAGCCTAGGTTTTTGTTTGTACTCTA--AAAAAAATCGACGAGATAAAAAAAATGAGCTAGTAG
CAT----GCGTACGTCGCAAAGTTGCAAGACAATACAATCACCCACACAACAACCCAAGAGAAATCCACACGGCGATCGA
TGGGCAGACGATGAGATACATGCCAGTACAAGGCTAGGCGGCCGACACCCGATTTAAACTACACATTCTCCCCTCCCGCC
GGTGACATCATATCCTTCAAATTTCAAGCCAGCCTTTGGAGATTGGTTTCG-------TCTTCCTCCTCACCGTCGCCAT
CACCATCGGCAACCTTTGCAACAAGCCACCCCCTTCCTCCA-----------G-----CCATATATACCTCCACGCCTCC
TCCTCGCCCTTCTCATCTCCTCATCGAT-CATTCCTAGCAAGCTCGCCCTCTCTCGAG----AAAACAGAAGGCTCTCCT
CTCTCT--------------------------------------------------------------------------
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---------------------------CTCACGGAAAACAGAAGGCTCTCCGGCTCTACTCCCCCGAGCTCTA--CACCC
CGGCCTCTG--CATCTCTAATGGGGGAGCACGCGTACGACCACAGCAGCAGCAGCGGGGGCGGCATGAGCCCGTCGACGC
CGCCGGTGCAGCAG---C---------GCAGGGGCCTCTCCCGCCACGCGACGGCGCCCAGGGCCACCACAACGCGGCCG
GCGATAAGGATCATCCACATCATCGCGCCGGAGATCATCAAGACCGACGTCGACAACTTCCGGGACCTCGTGCAGCGCCT
CACCGGGAGGCAGCACCACCAGCCGGCCGACGTCACGGCGAACGACCGCGC---------GGCAGTGACGGTGGGCGTGG
CGACCACGCCGCCGTCGCCCGTAGAGGAGAAGCCGCAGCCGCAGAAGAAGAGGCTGGCACCAGCGCCGGCGCTGGCGGAC
GATTTCGTGGCGCAGCAGGAGAACAAGAGGAGGAAGAAGATCAAGTGCGAGGTGGTGAAGGTGGAGGAAGGAGGGTTGGG
CTACGGCGGCGGCGAC---CTCGACTTCAGCGAGCTGTGGATGGATCTCAACCCCGGGGGCTTCCTGAGCTTCTTGGAGG
AGGACGTGTTCCAGGGGATGA---TGGCTCCTGACCTGCTGCAGCAGCCGCTGGGGGCG------CCGAGGATGGATTTA
GTTGGTGAAATGTGCGCCTCCTTTCTGGCTTAGTTAGTTAGCCAGAGCTGTTCTTGTGATCTTTATCTTGTTTTTGTGAG
AATTTTTTGCACTTTGGTTGAGAGAAATGGATTCTTTTCTCTCTTTCA--------CTAGATGAACATATTTA----CAG
TGGTCTTGAAAGAACTTGCGCCCATG----GTTGCAAATACTAG------------------------------------
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--------------------------------------------TAGTGATTATGTAAGCCTCCCTGGTGGGATGATGAT
CAATGATCATCCAAGGAATATGATCGGTTTGGGTGCCTACATTTGTTTTCGGTCTCGATCAGAAATGTAAATAATTGTTC
CA------TCTTGAAAATGCCATGTGGAGAACAAACAGAACAGTGATGGTTTCAAAACTCCATCGATACCGGTGCACTTC
TATTTTCAAAC---------------------------------------------------------------------
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--------TGTAGTTGCGCTTGCACTTGATCATCATTCCAAGTAG------TTTTTGGAAGGAAAATCATA---CTCAAT
CTGAATAACATTTTT-CTCTTTTTGCACAAGATGGAGCCCCATGATTCCATCAATTCAGTAGCTGCACCAGACAAAGGAT
GCTCTGCTAAGTG--GTGTCTGTTTTTCTCTTTACTAGTTGCAAAATGATGTGGACAATCAGGTGTGTGTATGTGACTAT
GAAAAGCTGCGTAATACCTTGATGGGAATAATTATATTTTTGTACCACCATTCTTCTAGGTGAAGTCTTTAATAGTCCGG
TTGTGTGTTGTCATTAGCAATATGCAGCGGTGTAAGCACGCTGGCAGAAAACGATGCTTGCGGTATGCTAATCCGTA--G
GTAACTTGT-T-AGCAAA--------------------------------------------------------------
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-------------------TACTTGCTTGTTCTGGCATCTTAAACAAGATCCAGTGGTTCTTTTTTAACAA---------
----TTGGAATAATCACACATAA--------TAGTACTACTGATCTAAGATGTGGTACTTCTGTACTTCAGAATAGATAG
CCGTACCAAAGGGTAGCTTATAAATTCAGACAA-----------------------------------------------
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------------------------------------------------------------------------------AG
CTATGGATGCTCAAATTTAGTTGACTATTAGCTTTTATTCAGCCAACTCCT-----TGTCAATCAATGGCCAAAGACTCC
AGGAAATATCCAGTACTCAT
>chr7B_437
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------------------------------------GAAGTTTGAAGGGGAGAATTTGTCATAGCCGCCTAGGGTTAGAA
ACATAGTGGGTCATAGCCGCCTAGGCTTTTGTTTTTACTTGCAGAAAAAAATCGGCGAGAAAAAAAAAATGAACTAGTAG
CATGCATGCGTACGTCGCAAAGTTGCAAGGCAATACAATAGCCCACA--ACAA-CCAAGAAAAATCCACACGGCGATGGA
TCGGCAGATGGCGCGGTACAAGCCAGTACAAGGCTAGGC---CGACACCCTCTTTAAACTACACATTCTCCCCTCCCGCC
CGTGACATCACATCCTTCAAATTTCAAGCCAGCTTTTGGAGATTGGTTTCC-------CCTTCCTCCTCACCATCGCCAT
CACCATCGGCAACCTTTGCAGCAAGCCAGCCCCTTCCTCCTTCCTCGCTCCCG-----CCATATATACCTCCACGCCTCC
TCCTCGCCCTTCTCATCTCCTCC----T-CATCCATCCATAGCTCTCCAACTCTCGAG----AAAACTGAAGCTCTAGTC
TCACGAG-AG----------------------------------------------------------------------
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---------------------------------AGAAACAAAAGGCTCTCCATCTCTACACCTCCGAGCTCTA--CACCC
CGGCCTCTA--CATCTCTAATGGGGGAGCACGCGTACGACCACAGCAGCAGCAGCGGCGGCGGCATGAGCCCGTCGACGC
CGCCGGTGCAGCAGCAGC---------GCAGGGGCTCCTCGCGCCACGCGGTGGTTCCCAGGGCCGCCACGACGCGGCCG
GCGATAAGGATCATCCACATCATCGCGCCGGAGATCATCAAGACCGACGTGGACAACTTCCGGGACCTCGTGCAGCGTCT
CACCGGGAGGCACCGCCACCAGCCGGCCGACGCCACGGCGGACGACAGCGC---------GGCAGTGACGGTGGGCGTGG
CGACGACGCCGCTATCGCCTGTAGAGGAGAAGCCGCAGCCGCAGAAGAAGAGGCTGGCGCCTGCGCCGGCGCTGGCGGAC
GATTTCGTGGCGCAGCAGGAGAACAGGAGGAGGAAGAAGATCAAGTGCGAGGTGGTGAAGGTGGAGGAAGGAGGGTTCGG
CCACGGCGGCGGCGAC---CTCGACTTCAGCGAGCTGTGGATGGATCTCAACCCCGGGGGCTTCCTGAGCTTCTTGGAGG
AGGACGTGTTCCAGGGGATGA---TGGCTCCCGACTTGCTGCAGCAGCCGCTGGGGGCG------CCGAGGATGGATTTA
GTTGGTGAAATGTGCGCCTCCTTTCTGGCTTAATTAGTTAGTCAGAGCTGCTCTTGTGATCTTTTTCATGTTTTTGTGAG
GATTTTTTGCACTTTGGTCGAGAGAAATGGATTCTTTTCTCTCTTCTTCCCTTTGTTTAGATGAACATAA-TTACTACAA
TGGTCTTGGAAGAACTTGCACCCATG----GTTGCAAATACTAG------------------------------------
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-----------------------------------------------TGATTATTTAAGCTTCCCTGGTGGGATGATGAT
CAATGATCATTCAAGGAATATAATCGGTTTGGGTGCCTACATTTGTTTTCGGTCTCGATCAGAAATGTAAATAATTGTTC
TA------TCCTGATAGTGCCATGTGGAGAACAATCAGAACAGTGATGGTTACAAAACTTCATCGGTACCGGTGCACTTC
TGTTTTCAAAC---------------------------------------------------------------------
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--------TGTAGTTGCACTTGCACTTGATCATCATTCCAAGTAACCCTGTTTTTTGGAAGGAAAACCATAGTACTCAAA
CAGAAAATATTTTCTACTCTTCTTGCACAAGATGGAGCCCCATGATTCCATCAATTCAGTAGCTGCACCAGACAAAGGAT
GCTCTGATAAGTG--ATGTCTGTTTTTCTCTTTACTAATTGCAAAATGATGTGGACAACCAGGTGTGTGTATGTGACTAT
GAAAAGCTGTGTATTACCTTGATGGGAATAATTCTATTTTTATACCAGCATTCTTCTAGGTGAAGTCTTTAATAGTCCGG
TTGTGTGTTGTCATTAGCAATATGCAGCGGTGTAAGCATGCTGGCAGAAAACGATGCTTGCGGTATGCTAATCCGTA--G
GTAACTTGT-TTAGCAAA--------------------------------------------------------------
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-------------------TACTTGCTTGTTCTGGCATCTTAAACAAGATCCAGTGGTTCTTTC-TAATAA---------
----TTGGGATAATCACACATAATAGTACATTAGTACTACTGATCTAAGATGTTGTACTTCTGTAATTCAGAATAGATAG
CCGTACCAAAGGGTAGCTTATAAATTCAGACAA-----------------------------------------------
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------------------------------------------------------------------------------AG
CTATGGATGCTCAAATTTAGTTGACTATTAGCTTTTATTCAGCCAACTCCT-----TGTCCATCAATGGCCAAAGGCTCG
AGGAAATATCCGGTACTCAT
>chr7D_464
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---------------------------------------------------------------GCCGCCTAGGATTAGAA
ACATAGTGGATCATAGCCGCCTAGGTTTTTGTTTTTACTCGCAAAAAAGATCGACCGAGATAAAAAAAATGAGCTAGTAG
CATGC----GTACGTCGCAAAGTTGTAAGACAATACGATCGCCCACA--ACAACCCAAGAAAAATCCACACGGCGATCGA
TGGGCAGACGATGAGGTACATGCCAGTACAAGGCTAGGC---CGACACCCTCTTTAAACTAGGCATTCTCCCCTCCCGCC
CGTGACATCATATCCTTCAAATTTCAAGCCAGCCTTTGGAGATTGTTGGTTTCCTCTTCCCTCCTGCTCACCCTCGCCAT
CACCATCGGCAACCTTTGCAGCAAGCCACCCCCTTCCTCCTTCCTCCCTCCCGCCATACCATATATACCTCCACGCCTCC
TCCTCGCCCTTCTCATCTCCTCCTCCCCCCATCCATCCATAGCTCTCCAACTCTCGAG----AAAACTAAAGCTCTAGTC
TCACGAG-AG----------------------------------------------------------------------
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---------------------------------AAACAAAGAAGGCTCTCCGGCTCTACGCCTCCGAGCTCTA--CACCC
CGGCCTCTA--CACCTCTAATGGGGGAGCACGCGTACGACCACAGCAGCGGCGGCGGTGGCGGCATGAGCCCGTCGACGC
CGCCGGTGCAGCAG---CAGCAGCAGCGTAGGGGCTCCTCGCGCCAGGCGATGGTGCCCAGGGCCACCACGACGCGGCCG
GCGATAAGGATCATCCACATCATCGCGCCGGAGATCATCAAGACCGACGTCGACAACTTCCGGGACCTCGTGCAGCGCCT
CACCGGGAGGCACCACCACCAGCCGGCCGACGCCACGGCCGACGACAGCGC---------GGCAGTGACGGTGGGCGTGG
CGCCGACGCCGCCGTCGCCGGTAGAGGAGAAGCCGCAGCCGCAGAAGAAGAGGCTGGCGCCTGCGCCGGCGCTGGCGGAC
GACTTCGTGGCGCAACAGGAGAACAGGAGGAGGAAGAAGATCAAGTGCGAGGTGGTGAAGGTGGAGGAAGGAGGGTTCGG
CTATGGCGGCGGCGAC---CTCGACTTCAGCGAGCTGTGGATGGATCTCAACCCCGGGGGCTTCCTGAGCTTCTTGGAGG
AGGACGTGTTCCAGGGGATGACGATGGCTCCCGACTTGCTGCAGCAGCCTCTGGGGGCG------CCGAGGATGGATTTA
GTTGGTGAAATGTGCGCCTCCTTTCTGGCTTAGTTAGTTAGTCAGAGCTGTTCTTGTGATCTTTTTTATGTTTTTGTGAG
GATTTTTTGCACTTTGGATGAGAGGACTGGATTCTTTTCTCTCTTCTTCCCTTTGTCTACATGAACATAATTTACTGCAA
TGGTCTTGGAAGAACTTACACCCATG----GCTGCAAATACTAG------------------------------------
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-----------------------------------------------TGATTATGTAAGGTT--------GGATGATGAT
CAATGATCATCCAAGGAAT--GATCAGTTTGGGTGCCTACATTTGTTTTCGGTCTCGATCAGAAATGTAAATAATTGTTC
TAATTCTATCTTGATAGTGCCATGTGGAGAACAATTAGAACAGTGACGGTTTGAAAACTCGATCGATACCGGTGCACTTC
TATTTTCAAAT---------------------------------------------------------------------
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--------TGTAGTTGCACTTGCACTTGATTATCAAAACCA-------------------------------TACTCAAA
CTGGAAATATTTTGTATTCTTTTTGCACAAGATGGAGCCCCATGATTCTATCAATTCAGTAGCTGCACCAGACAAAGAAT
GCTCTGATAAGTG--GTGTCTGTTTTTCTCTTTACTAATTGCAAAATGATGTGGACAACCAGGTATGTGTATGTGACTAT
GAAAAGCTGCGTATTACCTTGATGGGAATAATTCTATTTTTATACCACCATTCTTCTAGGTGAAGTCTTTAATAGTCCGG
TTGTGCGTTGTCATTAGCAATATGCAGCGGTGTAAGCACGCTGGCAGAAAACGATGCTTGCGGTATGCTAATCCGTA--G
GTAACTTGT-T-AGCAAAT-------------------------------------------------------------
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--------------------ACTCGCTTGTTCTGGCATCTTAAACAAGATCCAGTGGTTCTTTTTTAATAA---------
----TTGGAATAATCACACATAA--------TAGTACTACTGATCTAAGATGTAGTACTTCTGTAATTCAGAATAGATAG
CCGTACCAAAGGGTAGCTTATAAATTCAGACAA-----------------------------------------------
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------------------------------------------------------------------------------AG
CTATGGATGCTCAAATTTAGTTGACTATTAGCTTTTGTTCAGCCGACTCCT-----TGTCCATCAATGGCCAAAGACTCG
AGGAAATATCCGGTACTCAT
>chr3D_823
CCT-----------------------------------------------------------------------------
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--------------------------------------------------CCG-----CCATATATGCCTCCACGCCTCC
TCCTCGCCCTTCTCATCTCATCATCGAT-CATTCCTAGCAAGGTCACCCTCCCTCGATCGACAAAACTAAAGTCTCTCGT
CTCCCTCAAGAGAGTAAATTGCTCAAAGCCACCACATTTGTGGCTAGGGTACTCCAAAACTACTGCTTTTGCCAAAAATC
ACAAAAAACCACCACTTCTGCGTCAAGTGAATAACAAAATGCACTAATTCAATACTGAGCCGTGTTAATAGCAAAACTGA
CGGGTAGGACCCACATGTCTGGGCTGATGTGGCGAAGACTAGTATTAGTCAATGTTCAACCTGCTGAGGTGGACGAGGGT
CCCACTTGTCTGTCTCGCACCTTCTTCTTCCTCCTCAATTTTCTCTCTCCCCTTCTCACCACCTCCACCGGCGGCCGGAG
GCTGAGCTCAAGAGGCGTGCCCGCCGGCAAGCCTGCCTTGCAGTGTCGTTGCCTCGCGCTTGCCGGCAAGCCCCGCCCCG
CTCCCCCAACGCCGTTGCCCCACCGCTGCTGCCATCCCGCGACAGTGCCTCCGCACCGCCGATTCGCGCCTGCAGCGACG
CCATCCGGCGTCTGCACCCGCAGCGTCGTCGTCCCCCGCCGACCACCATCCCGCGTCCGCGCCCGCCTGCCGCCATCCCG
CTTTCGCGCCTCCAACGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACCTGCAGCGC
CGCCGCCCCCGCCCCCTGCCGCCCCACGCCCGCACCTGTAGCGCCGCCGCCGCCGCCCCCTGCCGCCCCACTCCCACACC
CGCAGCTCAAGGTCGCGGCCGTGGATGCCTCGCGGGCTGGCTGGGGTGGTCAAGCGGGACAAGGCACGACGCATCCAGGG
TCGTCGGGGCCATGCCGGCGCGGGCGGCGACTGGCTAGAGCAGGAGCCCCGGCGGCAGTCGGCTGCAGCTGAGCTCGAGC
AAGGGGAGAGAGAAGGAAGGAGGAGGCGTGGAGGAATAGGGCGGCGAGCAGTCCCCCTTGTGGCTGGTGGCGGCGGCTCC
TCTCGGGACAGGGGCGAGGGCACGGGCTGGCTGGGATTTGTGGTCGCCGGAGCAGACTACAGGCGAGGTAGAAGAAGAAG
AATAGGGGGAAATAAGATGTGTGGCTGACAGGTGGGACCTCGTCCACCTCAGCAGATCAACATATTAACTTGGACTAATC
TTTGCCACATCAGCCCGACGGATAGGCCCCACCCGTCAGTTTCGCTGTTAGACGCGGCTCAGTTCGGAATTAGTGTGATT
TGTTACTCACTTGCCGCGGAGGTGGTGGTATTTTGTGCTTTTTGGCAAAAGCGGTGGTTTTGGAGTACCCTAGCCACGAA
TGTGGTGGCTTTGAGCAATTTACTCCCCTCAAGAGAAACACAAGGCTCTCTATCTCTACGCCTCCGAGCTCTACACTCCG
GCCTCTACATCCATCTCTAATGGAGGAGCACGCGTACGACCACAGCAGCGGT---------GGCATGAGCCCGTCGACGC
CGCCAGTGCAGCAG---C---------GCAGGGGGCCCTCGCGCCACGCGACGGTGCCCAGGGCCGCCACAACGCGACCG
GCGATAAGGATCATCCACATCATCTCGCCGGAGATCATCAAGACCGACGCCGCCAACTTCCGGGACCTCGTGCAGCGCCT
CACCGGGAGGCACCACCACCAGAACGCCGATGCCAGGGCGGACGAGGATGACAACAACAAGGAAGTGACGGTGGGCGTGG
CGCCAACGCCGACGTCCCCAGTAGAGGAGAAGCCACAGTCGCAGAAGAAGAGGCT-------------------------
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>chr3B_823
CCT-----------------------------------------------------------------------------
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--------------------------------------------------CCG-----CCATATATGCCTCCACGCCTCC
TCCTCGCCCTTCTCATCTCATCATCGAT-CATTCCTAGCAAGGTCACCCTCCC----TCGATAAAACTAAAGTCTCTCGT
CTCCCTCAAG----------------------------------------------------------------------
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---------------------------------AGAAACACAAGGCTCTCTACCTCTACGCCTCCGAGCTCTA--CTCCG
GCCTCTACATCCATCTCTAATGGAGGACCACGCGTACGACCACAGCAGCGGT---------GGCATGAGCCCGTCGACGG
CGCCTGTGCAGCAG---C---------GCAGGGGGCCCTCGCGCCACGCGACGGTGCCCAGGGCCGCCACAACGCGACCG
GCGATAAGGATCATCCACATCATCGCGCCGGAGATCATCAAGACCGACGCCGCCAACTTCCGGGACCTCGTGCAGCGCCT
CACCGGGAGGCACCACCACCAGACCGCCGATGCCAGGGCGGACGACGATGACAACAGCAAGGCAGTGACGGTGGGCGTGG
CGCCAACGCCGCCGTCCCCATTAGAGGAGAAGCCACAGCCGCAGAAGAAAG-------------------GCTAGCCGAC
GATTTCGTTGTGCAACAGGAGAACGGGAGGAGGAAGAAGATCAAGTGCGAGGTGGTGAACGTGGAGGAAGGAGGGTTCGG
CTGCGGCGTCGGCGGTGATCTCGATTTCAGCGAGCTGTGGATGGATCTCAACCCCGGGGGATTCCTGAGCTTCTTGGAGG
AGGACGTCTTCCAGGGGATGATA---GCTCCGGATTTGCTGCAGCAGCCTCAGGGGGCACCGACACCGAGGATGGATTTG
GTTGGCGAAATGTGCGCCTCCTGTCTAGCTTAGTTTGTTAGCTAGAGCTGTTCTTGTGACCCTTTTCTTGTTTTTGTGAG
GATTTTTTGCACTTTGGTTGAGAGAACTTGATTCTTTTCTCTCCTC---CCTTTGTCTA-ATGAACATAATTT----CAG
TGGTCTTGGAAGAACTTGCACCCATGCATGGTTGCAAATACTCCCTCTATTCATAAATATTTGTCTTTTTAGAGATTTCA
ACAAGTGACTACGTACGAAGCAAAATGAGTGAATCCAAACTTTAAAATATGTCTACATACATCCGTATGTGGTAGTCCAT
TTGAAATCTCTAAAAAGACAAATATTTAGGAACGGAGGGAGTACTATTGATTATGTAAGCTCCGCTGCTGGTTTGATAAT
CAATTATCATTCAAGGAAT--GATCAGTTTGGGTGCCTACATTTGTTTTTAGTCTCTATCAGAAATGTAAATAATTGTTC
------TATCTTGATAGTGCCATGTGGAGAACAATCAGAACAGTGATGGTTTCAAAACTCCATCGGAACCGGTGCACTTC
TATTTCCAAACAGGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCTCCCGAGTATACGTACGTTAATACGTACAGGTCTTGGGGGGGCAAATCAATCAGCGCCTG
GCTCTTTTGTTTTTTATTTTGATTAAATCTCGGCGCCTCGCTCAGCTTCTGCGTGCTAGCTAGCCTAGGAAAGTAAACAG
ATTTGGTGAGCCTGGCCCATATTCGCACCGTCGCACGTACTCACGTGGAGACCGGAGAGAAAAGGAATCGTTCCATTGAT
TTCCTGTAACTTTGGATCGGTCGTTCCCTGCCTTTTCTGCTCTTTCGCTGTACGTGTTCGTCTAATCGCATCGACTCTGT
GACTGTCTCTGCCTCCTCACGAACGACGCCAGGACTGCGGCAGGTACATCTGATCGCGCCCTCTTCGTCTCTTCCCTCGC
ATGATCTTCGTCCTATTTCTTTTCTTTCTCATCCCTGATTCCTAATTTCTCGATCGATTGACAGATTGACATATTAACAC
GGCATTGTTTTTAGGGCGCTCAAATCATTGCGTCCACTTTGCCAGATTAGATTATATAGAGAAGGTATTATTCCATGCCC
TAGCAAATTCTCATTATGTTAGATGATCTTCTGCACTTAATCTAATGTATTAATTAACTTTGCGGTAGTTTTAAAAGCTA
ATTGTTCTTTTCAATTTCAGCAGGGTCATGTCGAGTTCAGGTAGAAAGTATACATCCAGAAGTCATAAAAGGAAAAAGAA
GGAGGCAGATGAAGAGAAAGAAGCATTGAGCGGATCTCTTTTTAAATATTATAAGAGCGATACGAGCACGCCAAGAAATC
CAGACGAGTTGGCGATAGTTCTTGCGGGTGACCAAACTAATGGCAATCAAGAAGATGATGGTCATACTCCTACAAAAGGC
AATGTTGACGTCAACATGGATGATAGCAATGTGAGTAATCATGAGCCCATATTTAATTCATATGCGGTAGAATCTACTAG
TGTTGATGAGGAACAAGTTAGTGTGGATATTTATGACCCAAGCAATTGGGGTAATCTTGATAACAAAGCGAGGGACATAT
TAGTGGAAAAGGGGCCTAAAATGGAAGAAGAAAACAATAAATATCCTTTGGATGAAAATTCAAGACATTTTTCATATAGC
CATTACTCCAGAAAGATGAGCAATGGAGAGGTGCGTGATAGGAAATGGTTAGTTTTCTCAAAACACACAAAGAAAGTGTT
TTGTTTTCGCTATAAGCTTTTCAATTATGATAAATGCAAGAGTACAATGGGGAATGATGGGTTTTGTGATTGGAGGCATA
TTAATGAGAGACTGAAAAAGAGCACGAAGCTAGTGATTTTGCATCTCAGAATGTTAGGAGAAATTTTTGAAGCTATATGT
AATACATTATGTGATATGCACAATCATTTTGGATGCACTTTCTTTGATACAAATTGTATGTACATACGATGATTATTAAT
AGGCATTTATACTAAGGGCCCCCAAGGGCCCCGGATTGTCGTTTCGCCCCGGGCCCCCAAAATCTTAAGACCGGCCCTGT
TTCCAAATTGTAGTTGAGTTGGAATTTCATAATCATTCCAAGTACCCTTG--TTTTGGAAGGAAAACCATA---CTCAAA
CTGAATAATACTTTCCTCTGTTTGCTTA----------------ATTCCATCAATTCAGTAGCTACACCAGACAAAGGAT
GCTCCGATAAGTGATATATCTGTTTTTCTGTTTAATAATTGCAAAATGATGTGGACAACCAGGTGTGTGTATGTGACTAT
GAAAAGATGTGTATTACCTTGACGGGAATAACTCTATTTTTATACCAGCATT------------GTCTTTAATAGTCGGG
TTGTGTGTTGTCATGAGCAATATGCAGAGGCGTAAGCACACTGGCAGAAAATGATGCTTGCGGTATGCTAATCCGTATAG
GTAACTTGTCT-AGCAAATACTCCCTCCGTTCCTAGATATAATTCTCTGTAGAAATTTCACTAAGTGGACTACATACGGA
GCAAAATAGATGAATATATATTTAAAATGCATTTATATACATCCGTATGTGGTTCACAGTGAAATTTCTACAAAGACTTA
TATTTAGGAACTGAGGGAGTACTTGCTTGTTCTGGCATCTTAAACAAGATCCAGTGGTTCTTTTTTAATAATTTCTTCTC
AATTTTGGAACAATCACACATAA--------TAGTACTACTGATCTAAGATGTGGTACTTCTGTGCTTCAGAAAAGAAAG
ATGTACCAAAGGGTAACACTAAAATTCAGATCCAGATATGGGTAGGCCTGGACACGAGCCGAGCCGAGCCGAGTCGAGTT
CAGACCGAGCCAGCCTTTGGCTCACCTAAAGCGAGCCGAGCTCGGCTCGGCTCGTTCGTTGAACGAGCCTGTTTCTGGTG
GCTCGGCTCGTTTTGCCTTTGGCTCGGTCCAGCCCGAGCAGCTCGTGTGTCACACGCCTCTGTAGTATGTGCTTGCATTC
GTCGGGGCGGCGGATGCTTGGCTAGCCAGGAAATGCAGCGGCCGATGCGGCGATGACAGGGCGCGTCTGCCGTCGGTGCC
GAGAGTGCCGTCCAGTGTCGGGCGCGGCGAGGACGACGACGGCATCCGGCATGGCGAGGACGACGACGGCTACACTCTAC
ACAATCAAGCAGAAGCATTCATCCATCCATCCCTCCATCGCATGTACGCAGGTGCAGTGCAACCATGCAGGTAGGACTCC
TACATGCAGGGGAGCATGTATGTCGTCTGCCGTCCGTGCGCTCGTGCAGGGGAGCGCGAGAGTGCCGAGCATGTGCGCGC
CCAGCCATAGGGATGGGAAGAAAGGAGAGTACCTGCTCGTCAGGTTCGGCAAGAAACCAGGGAAGGCGCGTCCGCCGGCG
TTCGGTGTGGTGAGGAAAGGCCGCCGCCCCGTTGCCATCGGTCCACTTTTTGCGCCGCGGCAAGGTGAGGGATGAGATAG
CGCCGACCAAAGGAAGGGAAGGGCTCGTGCCCTAATGCCAGAACGGCCGATGGGAACTGGGCTGGGCCTCGAGCGAGTCA
CCGAGTTGGACCAGGCGAAACTCGGCTCGGCTCGGTCGGGAATCGGGCCTCTTTTCACAATTGGGCTCGCTCGTTTATTG
TATCGGGCCGAGCTGTAACGGGCCGAGCTGGAGCGAGCTTCGGGCCGAGCCGAAAAGCTCGCTCGGACGTCCAGTCCTAG
ATATGGGTGCCCAAATTTAGTTGACTATTAGCTTTTATTCATAGCTCCTTGTCAAATGTCAATCAATGGCCAAAGACTCA
AGGACATATCCAGTACT---
>chr3D_1394
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---------------------------------AAGAAGATCAAGTGCGAGGTGGTGAAGGTGGAGGAAGGAGGGTTCGG
CTGCGGCGTCGGCGGTGATATCGATTTCAGCGAGCTGTGGATGGATCTCAACCCCGGGGGATTCCTGAGCTTCTTGGAGG
AGGACGTCTTCCAGGGGATGATA---GCTCCGGATTTGCTGCAGCAGCCTCTGGGTGCACCGACACCGAGGATGGATTTG
GTTGGCGAAATGTGCGCCTCCTGTCTAGCTTAGTTTGTTAGCTAGAGCTGTTCTTGTGACCCTTTTCTTGTTTTTGTGAG
GATTTTTTGCACTTTGGTTGAGAGAACTTGATTCTTTTCTCTCGTC---CCTTTGTCTA-ATGAACATAATTT----CAG
TGGTCTTGGAAGAACTTGCACCCATGCATGGTTGCAAATACTAG------------------------------------
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-----------------------------------------------TGATTATGTAAGCTCCCCTGCTGGGATGATAAT
CAATTATCATTCAAGGAAT--GATCAGTTTGGGTGCCTACATTTGTTTTTGGTCTCTATCAGAAATGTAAATAATTGTTC
------TATCTTGATAGTGCCATGTGGAGAACAATCAGAACAGTGATGGTTTCAAAACTCCATCGGAACCGGTTCACTTC
TATTTCCAAAT---------------------------------------------------------------------
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--------TGTACTTGAGTTGGAATTTCATAATCATTCCAAGTACCCTTG--TTTTGGAAGGAAAACCATA---CTCAAA
CTGAATAATACTTTCCTCTGTTTGCTTA----------------ATTCCATCAATTCAGTAGCTACACCAGACAAAGGAT
GCTCTGATAAGTGATATATCTGTTTTTCTGTTTACTAATTGCAAAATGATGTGGACAGCCAGGTGTGTGTATGTGAC---
-----------TATTACCTTGACGGGAATAACTCTATTTTTATACCAGCATTCTTCTAGGTGAAGTCTTTAATAGACGGG
TTGTGTATTGTCATGAGCAATATGCAGAGGCGTAAGCACACTGGCAGAAAATGATGCTTGCGGTATGCTAATCCGTATAG
GTAACTTGTCT-AGCAAAT-------------------------------------------------------------
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--------------------ACTTGCTTGTTCTGGCATCTTAAACAAGATCCAGTGGTTCCTTTTTAATAATTTCGTCTT
AATTTTGGAACAATCACACATAA--------AAGTACTACTGATCTAAGATGTGGTACTTCTGTGCTTCAGAAAAGATAG
ATGTACCAAAGGGTAACACTAAAATTCAGATCA-----------------------------------------------
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------------------------------------------------------------------------------AG
ATATGGGTGCCCAAATTTAGTTGACTATTAGCTTTTATTCATAGCTCCTTGTCAAATGTCAATCAATGGCCAAAGACTCA
AGGACATATCCAGTACT---
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--S---SS---SS-----------------S-------
-----------------S----------------S-----SS------------S-------------------------
----------------------------------------S------SS-----------S-------------------
---------------S-----------------------SSS--------SS----------------------------
S-------------------------------------------------S-------S-------------S-------
--------------------S-------------------S---------------------------------------
---------------------------------------------S---------------------S----S-----S-
---S----------------------------------------------------------------------------
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-------------------------------S-S-------------------------S--S-----------------
--------S------------------------------------------------S----------------------
------------------------------------S---S-------------S-------------------------
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------------S-------------------S-------S-----S---------------------------------
----S--------------S--------------------------------------S--S------------------
-------------------------S---------------------------------------------------S--
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-------------------------------S---S--------------------------------------------
----------------------------------------------------------------S---------------
S--------------------------------------------SSS---------------------S--S-------
--------S----------S------------------------------------------------------------
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----------------------------------------------S-------------S-------------------
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S-------------S-S-----------------S---------------------------------------------
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--------------------------------------------S---------------------S------------S
--------S-----------------------------------------------------------------------
------S------------------------------S--------------------S---------------------
-------------S-------------------S-------S--------------------------------------
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--------------------------------------------------------------------S-----------
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-------------------------------------------------------------------------------S
--------------------
>forward_242
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--------------------------------------------------------------AACCGAAGAGAAGGCACC
TG------------------------------------------------------------------------------
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>reverse_3449
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--------AAAGAACTTGCGCCCATGGT----------------------------------------------------
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--------------------
