>input_sequence_73852
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----------------------------------------------------ATGGCGGAGGTGGAGAGGAAGGCGCCGC
GGAGGGAGGAGGAGCTGGTGGAGGCGGCGCTGGCGGCCGCCGCGGCCGCGCTGTTCGTCTCCGGGGTCAAGAGCCTGGCG
CCGGCCGTGCTCGTGGACCGCTGGTGGTGGCCCCTGCCCGCGCAGGTGCTCGCCGCGGCGCCGTCGCCCGTCCTCTTCCT
GCTCCTCAACGTCCTCGTCGCCTGCATCGTCGTGGTGTCCCTGCAGCCCACCAAGCGACCCGCCGCGGCGTCGGCAACGG
GCGGCGTCGCCGCGGAGGTGGCGCCGGCGGGCGACGGCGCGGCGAAGAAGCTGAAGAAGAGGCGGAGCAGCAAGAGGCGC
GGGGCCGACGCCGAACCGGCGGCTCT------CGCGCCACCCTACGTCGCGGCCGACCGCTGCATGGCGCTGGTGGTTGA
CCGCGGTGTCG---TGGCGCCGACGGGCGGAGAAGAAGAAGAG---GAAGGAGCCGCCGGCGACGCGGCGGAGGTGGACA
GGCGCGCGGAGGAGTTCATCTCGGCGTTCCGGCACCGCCTCAGGGTCGACTCCTTCTCGTCTCGCCGCGGGGAGGCTGGC
GACGCGGCGGCGCGAGCCATCAGCAGCACTGCGCCGTGCTTTTGA-----------------------------------
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>chr5A_1_TraesCS5A01G331400
ATGTATTTATATCTGCTGCTCGTGCAAACTTTTCTGCTGTTTTGTATTATAATGAAACGCACTCCCCTGGCACTTGCTTT
GGGAAAGGTTCTGTTCCGCATTTGGTTACCGTATGAATGTACGATGGACTCGCATTCGAACCTAATCGCGTGGTTAAACT
AGCAGTGACTACAGTCATGGACTCATTATGGGGAATCTTTGGTCTACTCAGCCGTATTATCCACAC---ACTAATCACAA
GCAGCCTGGTTAGTGGTTACACCCTAGTGGTACTAGTAGTACAATCATCTGAGTGGTACTAGTTTTAAATTTTG----CT
AGTTTGGGCGGCA----TCCTTCTAGGTAGTATAT-----------------GCTCCCCGACCCGATGAAGAAAAGGGTC
ATCATCGTGTCCGCCACGCGGCCGGGAGAAACGACGACGACGCACGAGCCTCAGGCGTGCGCCCCTAGCCTCTCCC----
------CTCGATGACCCAAAACAAAAC-AAAAAGATGCCGCCTGGATGCTCGATTAGCTGCGAGCATGAGTATTATTTCG
TCTCTGCAGATGTGATTAGCGAGCTAGTCATCAGTGGATAAACACGCCTGCTAGTGCCAGCCATTTCTCTGTTGCCATGC
CGGACTGTCACTGACGAGAAAAGTTTATTACTCCTTACACATGACACAGAATTT-----GCTGCACT-------------
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-----------------------------------------------------------------------GCGTCGAGC
TGAGTGGCCCTGCAGCC---------------GGAGAAAT------GTCATGCTCTGCCGCTGCCATGGTCGGAG----G
GAGGGAATTTAATCCCCCGACAGCGGCTCGCACGGGCTGCGTGC-TTGCCCTGCTGCCGGCGCGACAGGCACCCCCGCAG
GCCGCAGCCATCGATTGCTCTCACGAGCCCTGCCCTTTTGGCGCCTGCCCTGGCTGCTCGCTCGGGTCTATACATATAGC
TCCACCACCCCGGCGCAAAGGCGAGCAAAAACCGCCCGAGCAG-------------AAGAAAGCGTCGCGCCGTGCGTGC
CTAGAGCGCAAACCACCGGGGAGCAGAGAGAAT-----AGGCGGCAGGATTGATGGCGGAGGTGGAGAGGAAGGCGCCGC
GGAGGGAGGAGGAGCTGGTGGAGGCGGCGCTGGCGGCCGCCGCGGCCGCGCTGTTCGTCTCCGGGGTCAAGAGCCTGGCG
CCGGCCGTGCTCGTGGACCGCTGGTGGTGGCCCCTGCCCGCGCAGGTGCTCGCCGCGGCGCCGTCGCCCGTCCTCTTCCT
GCTCCTCAACGTCCTCGTCGCCTGCATCGTCGTGGTGTCCCTGCAGCCCACCAAGCGACCCGCCGCGGCGTCGGCAACGG
GCGGCGTCGCCGCGGAGGTGGCGCCGGCGGGCGACGGCGCGGCGAAGAAGCTGAAGAAGAGGCGGAGCAGCAAGAGGCGC
GGGGCCGACGCCGAACCGGCGGCTCT------CGCGCCACCCTACGTCGCGGCCGACCGCTGCATGGCGCTGGTGGTTGA
CCGCGGTGTCG---TGGCGCCGACGGGCGGAGAAGAAGAAGAG---GAAGGAGCCGCCGGCGACGCGGCGGAGGTGGACA
GGCGCGCGGAGGAGTTCATCTCGGCGTTCCGGCACCGCCTCAGGGTCGACTCCTTCTCGTCTCGCCGCGGGGAGGCTGGC
GACGCGGCGGCGCGAGCCATCAGCAGCACTGCGCCGTGCTTTTGAC-CCGAGCCAGCTGCGTGCAC------------CT
CGCGGACACTGTTTTGTTCAAATTGCAGTCAGCTTCTTTCTTTCGCTTTCTTCTCGTTCTTCTTG-TTGCTCTTTGATCT
GAGCAAGTGATCTGTAGCTACCACTAGCACGTTGACATCAACTGGTTGGATGAATCTTCGAGCATGCT-----TGGCTGG
TGCTCCGAAGAAATACGCATGCGAATCTGCAGACATTTCTTCTTGGATAATACTTCCAATAAAATACTAGT---------
---------------------ACAGGAATGCGTGTGCACATTCCAATAAG-------------GCACTGAAACATA--TT
CTTGGAGGCATCGTATCAGTATTTGAAATCCATTTGAAG--AATCAAAAGTCACACAAAAAGTTGGAATGTTTCTCTGCA
GTATCCTCTGAAACCCC-GTGATTGCCTTTTTTTTTCTTCTTTCGAGAAACATACTCAGCGTTTTTTTTTTCATTTTAAC
GGAAAGAGACATCAAAAGGGCCACAGCCCAGAAAGCCCGCCACATCTCCAAGGCCCAGGTTTTCGGGCCCAGGAACCCCA
ACGGCCCCGGTTCTAGAGCCTTCCTTTCTGCGACGCCGGAAATAAAAGGCGCCCCCCTT---------------------
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-----------------------------------------------------CCCCTTCCCCTCCATTCCACCCCACCC
CACCCCACCACCACCCCCACTTGCCTCCGCTCCTAGGGTTTCCCGCCGCGCACCACCCCCAAAACCCTCGCCCCCC--CT
CCCCGGCGATCGGACCAATG---------GCGGCATCGGCGGCGGCGAAGAAGCTCACGCTCAAGAGCTCCGACGGCGAG
GACTTCGAGGTGGAGGTGGCGGTGGCGATGGCGTCGCAGACCATCAAGCACATGGTGGAGGACGGCTGCGCCGACAACAT
CATCCCGCTCCCCAACGTCAACGCCAAGGTCCTCTCCAAGGTCATCGAGTACTGCACGCAGCACGCCCCCAAGGCAGACG
ACGCCGCCA---------CCGCCGACTCCGCCACCGCCGTCAAGCCCGACGAGGAGACGCTCAAGGCCTTCGACGCCGAA
TTCGTC
>chr5D_98
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-----------------GCATTTGGTTACCGTATGAATGTACGGTGGACGCGCATTCGATTCTAATCTCGTGGTTAAACT
AGCAATGACTAGAGTCATCGACTCATTATGGGGAATCTTTGGTCTACCCAGCCGTATTATCCACATACTACTAATCACAA
GCAGCCTGGTTAGTGGTTACAGCCTAGTGG---TAGCAGTACAATCATCTGAGTGGTAGT---TTTATATTTTG----CT
GGTTTGGGCGGCATCGTTCGTTCTAGGTAGTACGTATATGCTCCTCTTTCTGGCTCCCCGACCCGATGAAGAAAAGGGTC
ATCATCGTGTCCGCCACGCGGACGGGACAAACGACGACGACGCACGAGCCTCCGGCGTGCGCCCCTAGCCTCTCCC----
------CTCGATGACACAAAACAAAAC-TAAAAGATGCCGCCCGGATGCTCGATTAGCCACGAGTGGTACTATTATTTCG
TCTTTGCAGATGTGATTAGCGAGCTA---ATCAGTAGATAAACACGCCTGCTAGC-------------------------
---------------------------------------CATGACAGAGAATTTGCTGCGCTGCACT-------------
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-----------------------------------------------------------------------GCGTTGAGT
TGAGTGGCCCTGCAGCCTGCAGCCTGCGGATGGGAGAAAT------GTAATGCTCTGCCGCTGCCATGGTCGGAGCCTCG
GAGGGAATTTAATCCCCCGACAGCGCCTCGCACGGGCTGCGTGCTTTGCCCTGCTGCCGGCGCGACAGGCACCCCT----
---GCGGCCATCGATTGCTCTCACGAGCCCTGCCCTTTTGGCGCCTGCCCTGGCTGCCCGCTCGGCTCTATACATATAGC
TCCGCCACCCCGGCGCAAAGGCGAGCAAAAGCCGGCCGAGCAGAGGCAGCTAGCGCAAGAAAGCGTCGTGCCGTGCGTGC
CCAGAGCGCAAACCACCGGGGAGCAGAGAGAGAGAGAGAGGCGGCAGGGTTGATGGCGGAGGTGGAGAGGAAGGCGCCGC
GGAGGGAGGAGGAGCTGGTGGAGGCGGCGCTGGCGGCGGCCGCGGCCGCGCTGTTCGTGTCCGGGGTCAAGAGCCTGGCG
CCGGCCGTGCTCGTGGACCGCTGGTGGTGGCCCCTGCCCGCGCAGGTGCTCGCCGCGGCGCCGTCGCCCGTCCTCTTCCT
GCTCCTCAACGTCCTCGTCGCCTGCATCGTCGTGGTGTCCGTGCAGCCGGCCAAGCGAGCGGCCGCGGCGGCGGCGACGG
GCGCCGTCGCTGCGGAGGTGGCGCCGGCGGGCGACGGCGCGGCGAAGAAGCTGAAGAAGAGGCGGAGCAGCAAGAGGCGC
GGGGACGGAGCCGAACCGGCGGTTCTTGCGCCCGCGCCACCCTACGTCGCGGCCGACCGCTGCATGGCGCTGGTGGTTGA
CCGCGGCATCGTGATGGCGCCGACGGGCGGAGAAGAAGAAGAAGAAGAAGGAGCCGCCGGCGACGCGGCGGAGGTGGACA
GGCGCGCGGAGGAGTTCATTTCGGCGTTCCGGCACCGCCTCAGGGTCGACTCCTTCTCGTCTCGCCGCGGGGAAGCCGGC
GACGCGGCGGCGCGAGCCATCAGCGGCACCGCGCCGTGCTTTTGACCCCGAGCCTGCATGCACCTCGCAGCTCATGCGCT
CGCGGACCCTGTTTTGCTCAAATCGCAGTTAG----TTTCTTTCGCTTTCTTGATTGTTCTTCTTCTTGCTCTGTGATCC
GAGCAAGTGAGCTGTAGCTACCACTGGCACTTTGACACCAACTGGTTGGATGAATCTTCAAGCATGCTATGCTTGCTTGG
TGTTCTGAAGAAATACGCATGAGAATCTGTAGACATTTCTTCTGGCCGGAGTAGTAAATTATTCTTGGATAATAGTACTG
TACAAGTCATGACATGGCACGACAAGAATGCGTGTGCACATTGCAATAAAATACTTCTCATGTGCGCTGAAACATA--TT
CTTGGAGGCATCGTATGAGTATTTGAAATCCATTTGAAG--AATCAAAAGTCACACAAAAAGTTGGAAAGTTTCTCTGCA
GTATCCTCTGAAATCCAAGTGATTACTTGTTTTTTCCCTTCC----GAGAAATACTCAGCGGG---TTTTTTATTCTAAC
GAAAAGAGACATCAAACGGGCCACAGCCCAGAAAGCCCGCCACATCTCCAAGCCCCAGATTTTCGGGCCCGGGAACCCCA
ACGGCCCCGGTTCTAGAGCCTTCCTCTCTGCGACGCCGGAAATAAAAGGCGCCCGAAACTACTATACAGACGACAGTACT
CCGGCCGAACACTGGACGATGTTGGATCGAACGGTGTTGTTTAGTTTTGCTTTACACATGAGCGGCTTGATGTGCTACAT
CGTCTGCAAATCGTCCGCCGTTTGTCGTCTGTGTAGCAGCGTTCAAAGGCGCCCCCCTTCCCCTCCCTTCCAGT-----C
CACCCCACCACAACCCCCACTCGCCTCCGCTCCTAGGGTTTCCCGCCGCGCACCACCCCCAAAACCCTCGCTCCCCACCT
CCCCGGCGATCGGACCAATG---------GCGGCATCGGCGGCGGCGAAGAAGCTCACGCTCAAGAGCTCCGACGGCGAG
GACTTCGAGGTGGAGGTGGCGGTGGCGATGGCGTCGCAGACCATCAAACACATGGTGGAGGACGGCTGCGCCGACAACAT
CATCCCGCTCCCCAACGTCACCGCCAAGATCCTCTCCAAGGTCATCGAGTACTGCACGCAGCACGCCCCCAAGGCGGACG
ACGCCGCCGCCGCCGACTCCACCGGCACCGCCACCGCCGTCAAGCCCGACGAGGAGAAGCTCAAGGCCTTCGACACCGAA
TTCGTC
>chr5B_98
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-----------------GCATTTGGTTACCGTATGAATGTAGGATGGACGCGCATTCGAACCTAATCTCGTGGTTAACCT
AGCAATGACTACAGTCATCGACTCATTATGGGTAATCTTTGGTCTACCCAGCCGTATTATCCACATACTACTAATCACAA
GCAGCCTGGTTAGTGGTTATACTCTAGTGGTACTAGTAGTACAATCATCTGAGTGGTAGTAGTTTTAAATTCTACGTACT
CGTTTGTGCGGCA----TCGTTCTAGGTAGTACAGGT--------------------CCGACCCGATGAAGAAAAGGGTC
ATCATCGTGTCCGCCACGCGGACGGGACAAACGACGACGACGCACGAGCCTCAGGCGTGCGTCCCTAGCCTCTCCTCTCC
TCTCCTCTCGGTGACACAAAACAAAACAAAAAAGATGCCGCCTGGATGCTCGATTAGCCGCGAGTGGTA-TATTATTTCG
TCTCTGCAGATGCGATTAGCGAGCTAGTCATCACTGGATAAACACGCCTGCTAGCCATG------TCTCTGTTGCCATGC
CGGACTGTCACTGACGAGCAAAGTTTATTA---CTTACACATGACAGAGAATTT-----GCTGCACCGCGTCGAGCGGCA
AAATTGACAAATTTGACCTATGGACGAAATCAAATCACATAATGAACTGCCCGTGAAACTATTTCACGCGGCTGACCTTT
TTGTGTGACGCCAGACACGAAAGCGCCACACTACACTGTGCAACGCCTCACAAATAGGCGCTACATGCCTGATCAGCGTC
GCATCTGTGTGATCCGAAAATTACTAAATCAGTGTGCAGCGCCTGAGAGTTAGGCGCCACACTATACAGTGTAGCGCCTG
GCTTCTAGGCGTTGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGCAGCGCCTGAGAGCTAGGCGCCACACT
ATACAGTGCAGCGCCTAGCTCTTAGGCTCTGCACACTGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGACCAG
GCGTGTAGCGCCTATCTGTGAGCGTTGCACAATGTAGTGTGACGCCTTTGTATCGGGCGTCACACAAAAAGGTCAGCCGT
GTGAAATAGTTTCACGGGCAGTTCACTCTGTGATTTGATTTCGTCCGCAGGTCAAATTTATCAAATTTGCCGCGTCGAGC
TGAGTGGCCCTGCAGA-------CTGCGGGTGGGAGAAATGTAGTAGTAATGCTTTGCCGCTGCCATGGTCGGAG----G
GAGGGAATTTAATCCCCCGACAGCGCCTCGCACGGGCTGCGTGCTTTGCCCTGCTACCGGCGCGACAGGCACCCCT----
---GCGGCCATCGATTGCTCTCACGAGCCCTTCCTTTTTACCGCCTGCCCTGGCCGCTAGCTCGCCTCTATACATATAGC
TCCACCACCCCGGCGCAAAGGCGAGCAAAAGCCGGCCGAGCAGAGGCAGCTAGGGCAAGAAAGCGTCGTGCCGTGCGTGC
CCAGAGCGCGAACCACCGGGGAGCAGAGAGA----GAGAGGCGGCAGGGTTGATGGCGGAGGTGGAGAGGAAGGCCCCGC
GGAGGGAGGAGGAGCTGGTGGAGGCGGCGCTGGCGGCGGCCGCGGCCGCGCTGTTCGTGTCCGGGGTCAAGAGCCTGGCG
CCGGCCGTGCTCGTCGACCGCTGGTGGTGGCCCCTGCCCGCGCAGGTGCTCGCCGCGGCGCCGTCGCCCGTCCTGTTCCT
CCTCCTCAACGTCCTCGTCGCCTGCATCGTCGTCGTCTCCGTGCAGCCGGCCAAGCGACCAGCCGCGGCGGCGGCGACGG
GCGCCGTCGCCGCGGAGGTGGCGCCGCCGGGAGACGGTGCGGCGAAGAAGCTGAAGAAGAGGCGGAGCAGCAAGAGGCGC
GGGGACGGCGCCGAACCGGCGGCTCT------CGCGCCGCCCTACGTCGCCGCCGACCGCTGCATGGCGCTGGTGGTTGA
CCGCGGTGTCGTGATGGCGCCGACGGGCGGAGAGGAAGAAGAG---GAAGGAGCCGCCGGCGACGCGGCGGAGGTGGACA
GGCGCGCGGAGGAGTTCATCTCGGCGTTCCGGCACCGCCTCAGGGTCGACTCCTTCTCGTCTCGCCGCGGGGAAGCCGGC
GACGCGGCGGCGCGAGCCATCAGCGGCACTGCGCCGTGCTTTTGAC-CCGAGCCTGCATGCACCTCGC-------GCGCT
CGCGGACCCTGTTTTGTTCAAATCGCAGTCAG----TTTTTTTCGCTTTCTTGAT-------------------------
-----------CTGTAGCTACTACTGGTACTTTGACATCAACTGGTTGGATGAATCTTCAAGCATGCT-----TGCTTGG
TCGTGTGAAGAAATACG---------------------------------------------------------------
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>chr5B_1898
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---------------------------------------------------------------GCACTGAAACATATATT
CTTGGAGGCATCGTAGCAGTATTTGAAATCCATTTGAACACAATCAAAAGTCACACAAAAAGTTGGAAAGTTTCTCTGCA
GTATCCTCTGAAATCCAAGTGATTACTTGTTTTTTCCTTTTCAAGAGAGAAATGCTCAGCGGG--TTTTTTTATTTTAAC
GAAAAGAGACATCAAAAGGGCCACAGCCCAGAAAGCCCGCTACATCTCCAAGGCCCAGAGTTTCGGGCCCGGGAACCCCA
ACGGCCCCGGTTCTAGAGCCTTCCTCTCTGCGACGCCGGAAATAAAAGGCGCCTCCCTT---------------------
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-----------------------------------------------------C----------------CATT-----C
CACCCCACCACCACCCCCACTCGCCTCCGCTCCTAGGGTTTCCCGCCGCGCACCACCACAAAAACCCTCGCTCCCCACCT
CCCCGGCGATCGGACCAATGGCGGCGGACGCGGCATCGGCGGCGGTGAAGAAGCTCACGCTCAAGAGCTCCGACGGCGAG
GACTTCGAGGTGGAGGTGGCGGTGGCGATGGCGTCGCAGACCATCAAGCACATGGTGGAGGACGGCTGCGCCGACAACAT
CATCCCGCTCCCCAACGTCACCGCCAAGATCCTCTCCAAGGTCATCGAGTACTGCACGCAGCACGCCCCGAAGGCGGACG
ACGCCGCCG---------CCGCCGACTCCGCCACCGCCGTCAAGCCCGACGAGGAGAAGCTCAAGGCCTACGACGTCGAG
TTCGTC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS--------------------------------S-----------------S------------
----S-------------S----------------------------S-----------------S--------------
----------------------------------------------------------S---------------------
S------------------S------------S-----------------------------------------------
---------------------S-----S----------------------------------------------------
---------------S------------------------------------------S-----SSSS-S----------
------------------------------------------------------SSSSSSSSSSS---------------
------------------S-----------SSS-------------S---------------------------------
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------------------------------------------------S-------------------------------
-------------------------S-------------------------------------------------SSSSS
SSS--S-----------------------------------------------------------S--------------
------------------------------S---S---------------------------------S-----------
-S-----------------------------SS---------------S-------------------------------
-------------------------------------S--------------------S---------------------
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----------------------------------------S-------SS----------S---------S----S----
---S----------------------------------------------------------------------------
----S--S------------------------------------------------------------------------
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-------------------------------------------------------------------------S--S---
------------------------S-----------------------------S--SSSSSS-S---------------
-------S---------------S--------SSSS----------------SSSSS-SS-SS-S--------S-----S
----------S--------------S----S----------------------------S---------------SS---
--S--S---------------S-------S-------------S-SSSS-SSSS-SS-S--SSS-SSS-SS---------
------------------------S-----------------S------S------------------------------
--------------------------------------------------------------------S-----------
-------------S--S-------S-S-S------S---S-SSS----S-S----------SSSS------S--------
-S--------------------------------------------------------S-----------S---------
-------------------------S------------------------------------------------------
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------------------------------------------------------------------S-----SSSSSSS-
---------------------S-------------------------------------------------S--------
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--------------------S-------S----------------------------------------------S----
--------S------------------------------------------------S----------------------
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>forward_88
--------------------------------------------------------------------GGCACTTGCTTT
GGGAAAGG------------------------------------------------------------------------
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>reverse_2483
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--CTCCGAAGAAATACGCATGCG---------------------------------------------------------
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