>input_sequence_73841
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------------------------------------------ACGTAATTTCATATCCTTTTGACATTATATATTGTCCC
TCTGGCTCTTGCTGGAATGTATACTGAAAGAATGGACAGAAGGTCTGTCATCGCTTGTTTTCTGGTGATGCTTGTGTTGT
TCGAAAGCGCATCTGCAGGTGTGTTCTCACATTTGCTGTTCTTAATTAAGTAGAGTTCCTTCTCTATTAAAAAA-AAGTA
GAGTTCCTAGAGTAGATGTTATTTCAAAAGAATAACCTTGAAAAATCTACATAAGATTTCTAGTCGTATTACCAAGAGTT
TTCTCAAATATTATGTTGATACAGATTGTGTGGATGTCCCTGAGGGTTTTCGCATCGTACCGCTTTTATGCAGCGTTGGA
AAAATCATGTGTTACAATCAATGTCTCACTATTATGGTATTAATTTTCATTGGTTTGTGATGCGCAGACTGTGAGGATGT
TCAATTTCAGATCTTGTTCTGCATCAAATCATCATGCGAGGATATATGCAAGTTTCAGTGGAAGGGTAAGAAGGTCTACA
ACCCTTGGTGCGATAAGTTCTTCGGTGGCTACTGCCACTGCAAGATTTGCCATGATTAATAGAACTTAATGGATATGTTA
GGCGCACTTCATGCTAGAAATAAA--------------------------------------------------------
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>chr4A_1_TraesCS4A01G363000
AGCCGCCGGCGCCCACAAGAACCCCCAAGACGCCGA--ATCCGCGGAAGGCATTGAGAACACAGGCCAGGAGCGCTGCCC
ACGGAGCCCTCGCGCATGTGGAAGCGAGGCAGAGTTAGGGCCCACAACAGCAACCCGGTGCACGGCCGGGGCAGGGCGGG
GCGGCGAGGCAATGCGAGGACGCCGACAACCTCACAAGACAGTAGTAGTAATCTGACGGGTAGGTAAGTTCTTTTCTTTT
TGCGGGTACGACAGGCAAGTGAGTTTAGTTGAGTTAATACCTTAGGGAGTTCATATTTGAGTTCATCAGGAGATATTTGA
GGGAACTTTACGACCATTTGCCCAACAAACCATGCAAGGACCGATTGATTTTACCATGCTGATATAGGGAGACAAGATTA
AGATTTTTCGTTTTTCATTTTTACAATGGAAATGCTTCACTTTGTTGCTGATGCGTACAAACACAAAGAGCATCTACAAG
CAGAGAACAACGGAAAAAATAGATCTAATAATATTGATCTATTGGCACTACATAGACTTCACATTAAAGAAGCAAAAACC
AATTTT-AGCTGGTTACAAAGCATCATCAACACAGAAAGGCTCACCTCTTCAAATTATCAAACAATGACATGAACACAAT
GAATGCAGTAATCTTC--CTC-----------CAGGTTTCACTGACCTATGTGTATTACATGCATCATTTTTCATAACTT
TGAG----------------------------------------------------------------------------
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----------------------------------------------------------GATAAGAATACGTACAATATAT
GTCATTAATTACCAAATTATTATTCTACTTCAACTATTGTGAACAAAAGTTAACTAAAAACGGACACCACCTTTTAGTAC
TTGGTCATGATATCTTATGGATGCACTTAGATGTCTTTGTCTAGAAGTCTAGATATGGCACGTCA--TTTCATATCCTTT
GGACTTTATGTGTTGTCACTCTGGCTTTCAATTGGGACCGCCTATTGGTAC--TTGGTAATCTTATCTTGTGGATGCACC
TTTATATGTCTTTT--------TCTAGAAGTTCTGAGTTGCCACGTAATTTCATATCCTTTTGACATTATATATTGTCCC
TCTGGCTCTTGCTGGAATGTATACTGAAAGAATGGACAGAAGGTCTGTCATCGCTTGTTTTCTGGTGATGCTTGTGTTGT
TCGAAAGCGCATCTGCAGGTGTGTTCTCACATTTGCTGTTCTTAATTAAGTAGAGTTCCTTCTCTATTAAAAAA-AAGTA
GAGTTCCTAGAGTAGATGTTATTTCAAAAGAATAACCTTGAAAAATCTACATAAGATTTCTAGTCGTATTACCAAGAGTT
TTCTCAAATATTATGTTGATACAGATTGTGTGGATGTCCCTGAGGGTTTTCGCATCGTACCGCTTTTATGCAGCGTTGGA
AAAATCATGTGTTACAATCAATGTCTCACTATTATGGTATTAATTTTCATTGGTTTGTGATGCGCAGACTGTGAGGATGT
TCAATTTCAGATCTTGTTCTGCATCAAATCATCATGCGAGGATATATGCAAGTTTCAGTGGAAGGGTAAGAAGGTCTACA
ACCCTTGGTGCGATAAGTTCTTCGGTGGCTACTGCCACTGCAAGATTTGCCATGATTAATAGAACTTAATGGATATGTTA
GGCGCACTTCATGCTAGAAATAAATAATTCATAACTTTGTGTCCTGGATCACTGATTTATGCATGGGATTGTATGCTTGG
CAGCGCATCATGCCATGTGAGAC---------------------------------------------------------
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ATAATCTATACTAAAAGGGTTGGG-CACGCTATATGCTGCGCCGTCGGTGTTGTTGGTTTCCAAAAA----AAAAAACAA
-TACTCACCAT----GTTTCAAAATATAAGGT------GTAT----TAATTTTTCGAAAAGCCCAACCTTTTAAGTTTGA
TCAAATTTGTAGAGAAATATATCAAAATTCATAGTATCAAATCGGTATGATTAGATTCATCTTGAAATGAGTTTTCATA-
C-CTTTT----GTTTTGTATTATGGATGTCGAT-ATTTTTT-GCTCCGAGCTTGGTCAAAGTTAAAAAAGTA--AC-TTT
CCAAAAA-AGTAATGCCCCTTATATTG-TGGAGCTGGT----GGAATATTTAGTTTGGCCAGTGGGGGAGATGATGGAGT
GT-GTGT--------TTTTTTAT----------------------GCCGTGATTTGATGG--GCCT-TTC----------
---ATGTTATCCGCTAACCAACATATATTTATGTGGGAAAATTTC-TGTGTCAGTGCCTCCATATACTATATTGATGCTA
CAATATCACATGGTGGCACTTCTTTTTT-TGGATGATGGGAGGATATGTGGAATTGATGTG-TTTTTATAGGCCGGTTGC
TGCTGATTGATTTGAAAAATCGTTAGCATGGTCAAAATCATATACCAAATCC-AAAATTGAATACCTCAGTTGCATGAAA
AAACTTCAAAATTAGCGAA-CATAGAGAATTAAAAGAA-TCGAATGGGAGAGCTTATTGAGAAATAGTTGAGCCGATTAA
AATCGGA-TGACCC-AATCTAAATTGAATACCTCAATTAATTGTGCTCAATTGAATGTGGGCTCTTTGAAACTAGAGGAC
ATAGTGTTATAGAGGATTGTCTCATGGAAAAGTTGTTTGAAGGCAAATATCGTATACTCCATCCGTCTCATAATATAAGA
GCACTCGTGTAAAAAAATGCTCTTATATTATGAAACGAAAGGAGTAGTTATGA
>chr5D_1
AGCCGCCGGCACCCACAAGAACCCCGAAGACGCCGAGAATCCGCGAAATGCATTGAGAACACGGGCCAGCAGCGCTGCCC
ACGGAGCCCTCGCGCACGTGGAAGCGAGGCAGAGTTAGGGCCCACAACAGCAACCTGGCGCACGGCCGGGGCAGGGCGGG
GCGGCGAGGCAATGCGAGGACGCCGGCAACCTCACGAGACAGTAGCAGTAATCTGACGGGTAGGTAAGTTCTTTTCTTTT
TGCAGGTATGACAGGCAGGTGAGTTTAGTTGAGTTAATACCTTAGGGAGTTCATATTTGGGTTCATCAGGAGATATTTGA
GGGAACTCTACGACCGTTTGCCCAACAAACCACGCAAGGACCAATTGA---CTCCATGCTGATACAGGGAAACAAGATTA
GGATTTTTCGTTTTTCATTTTTACAATGGAAATGCTTCACTTTGTTGCTGATGCGTACAAACACAAAGAGCATCTACAAG
CAGAGAACAACGGAAAAATTAGGTCTAATAATATTGATCTATTGGCACTACACAGACTTCACATTAAAGAAACAAAAACC
AA-TTT-AGCTGGTTACAAAGCATCATCAACACAGGAAGGCTCGCCTCTTCAAATTATCAAACAATAACATGAACATAAT
GAATGCAGTAATCTTCCTCTCTAGGATGTTTTCATGTTTCACTGACCTATGTGTATAACATGCATCATTTTTCATAACTG
TGAGGATAAAAAAAACCTAGACCAGTAGGGGGAGAAGCCCCAACTGATTTTTATTAGGGAAATGTTTACAATCGGCAGAC
CGGCCGAATGCTCGGCCGGTCCAGCGCGAGTCGCACGATTCCACCAGATCAAAGGACGCCTGTAGCCCACTCGCCACGTC
GCTACTGCAGTCTCCTGGCCCACCACCACTCCCCATCCCTCTCGACCCCTCTCGACACTCTTATCCCTTTCCCCGTCCAC
TCATCCCGCTGCTATCTCATCCCCTACCTCTAGCACCGCTCCTCATCCCCTACCAACAGCTCGAGCACCCAAATCAGATC
GCATGAGAAATCACCTCTGCTCCCCACCTCCCTTTCTTGCATCTAAATCTGGTCGAGACGGGGCTCTGCTCGTCCACTCC
ACCCCTTGCTGATGCGAGGAGTAATCAGGGGCTGATGCAACCCGGGGAAGCCATGGCCGTCTATCTCCTTGTCCTCCCCC
TCGGCGAGGTTGGACGTTTTGCAACAGGTGAGGCTGGAGGGGGTGGCCACCGGTGATGTGATTTTGCTGCAACCGGCACC
GAAAAAGCTACCACCGGTGCTGGATTTGCTGCAACCAGGATCCACAATTTTTGCCAGGATCCAGGTTTTTTGAGTGATTT
TTTTGCTGCAACCAGTCCAAAATTTTGCTACCATCGTTTTCTTTTTTGCTACCACCGTAGGTATCTTTTGATTTCTTTTT
GCTTAACTAGATCCATCTTTTTGCTGGAATCACTCAAACTTTTTGTTACCATGGTCTTCGATTTTTGCTACAGCCGTCTT
AGTTTTTGCTACCAACCCGTTTTTGACTTTTTTGCTTGATCCATCTTATTTTTGCTGGAACCACTCCAAGCTTTGCTATA
ATGGTGTTTGATTTTTTCTACCACCGTCTTTTGTGTTTTGCTACTCCCCATTTTCTGATTTTTTGCTGGATCGATCTTTT
TTGCTGGAACCATTCAAAGAGAGAGAAAAAGGAGGCCGTGAATGGCGTGGAGGGGGATGCAAACATATTTTTTTTGCTAC
AACCAGCGTCCTAGGAAGCTTCAATCGAAGGCAATGAATTTTGGGGACCGGCCACACCATGCGACCGCGAAAGCTGGAAC
CGTCGCCGAAAAAAGCTTCAACCGTTTTGTGAAAAAGCTTCAATGGGCGTGAGAAAAAAGCTGCAGCCGACGGCATAGCG
GTACGGCGACCGACGGCGAGTACGGCGACTGGTGGCGAGCTGGTGATGCTTCAAGACAGGCCTCAAAGCGTCCATGGCGG
TGTCCAGGGCAAAAAGTTGGATGCGATTTTTTCTAGCAAAAGAAAGCGATGCAAAAAGGTTGATCTGACGGGGTTGGCAA
AAAGATAAACTGACGTGTCAGATGTGACCGGTCGAACCGTTCCGCCGGTGCATGCGTACAAGCCAAGGCTCGAACCTGCG
TCGGCCACGAGACACACCGCCTCGCTGGCCACTGGGCTAGGAGCCCATCCACTGTGAAGATAAGAATACGTAGAATATAT
GTCATTAATTACCAAATTATTATTCTACTTTAACTATTGTGAACAAAAGTTAACTAAAAATGGAGACCACCTTTTAGTAC
TTGGTCATGATATCTTATGGATGCACTTCGATATCTTCGTCTAGAAGTCTAGATATGGCACGTCA--TTTCATATCCTTT
GGACATTATGTGTTATCACTCTGGCTTTCAGTTGGGACCGCTTATTAGTAC--TTGGTAATCTTATCTTGTGGATGCACC
TTTATATGTCTTTT--------TCTAGAAGTTCTGAGTTGCCACGTAATTCCATATCCTTTTGACATTATATATTGTCCC
TCTGGCTCTTGTCGGAATGTATACTGAAAGAATGGACAGAAGGTCTGTCATCGCTTGTTTTCTCGTGATGCTTGTGTTGT
TCGAAAGCGCATCTGCAGGTGTGTTCTCACATTTGTTGTTCTTAATTAAGTAGAGTTCCTTCTCTCT--AAAAA-AAGTA
GAGTTCCTAGAGTAGATGTTATTTCAAAAGAATAACCTTGAAAAATCTACATAAGATTTCAAGTCGTATTACCAAGAGTT
TTCTCAAATATGATGTTGATACAGATTGCATGCATGTCCTTGAGGCTTTTCGCATCGTACCGCTTTTATGCAGGGTTGG-
AAAATCATGTGTTACAGTCAATGTTTCACTATTATGGTATTAATTTTCATTGGTTTGTGATGCGCAGACTGTGAGGATGT
TCAATTTCAGATCTTGTTCTGCATCAAATCATCATGCGAGGATATATGCAAGTTTCAGTGGAAGGGTAAGAAGGTCTACA
ATCCTTGGTGTGATAAGTTCTTCGGTGGCTACTGCCACTGCAAGATTTGCCATGATGGATAGAACTTAATGGATATGTTA
GGCGCACTTCATGCTAGAAATAAATAAGTCATAACTTTGTGTCCTGAATCACTGATTTATGCATGGGATTGTATGTTTGG
GAGAGCGTCATGCCATGTGAGAC---------------------------------------------------------
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ATAATCTATACTAGATAGGTTGGA-CACAC--TATGCTGCGCCGTTGGTGTTGTTGGGTTTCCT-------AAAAAACAA
-TACTCACCAT----GTTTCAAAATATGAGGT------GTAT----TAATATTTTGAAAAGTCCAACCTTTTAAGTTCGA
TCAAATTTGTAGAGAAATATATCAAAATTCATAGTATCAAATCGATATGATTAGATTCATCTTGAAATGAATTTCCATA-
C-TTTTT----GTTTAATATTATGGATGTCGGT-ATTTTTT-GCTCTGAGCTTGGTCAAAGTTAAAAAAATA--AC-TTC
CCAAAAA-AGTAATACCGCTTATATTT-TGGAACTGAT----GGAATATTTAGTTTGGCCGGTGGGGGAGCTGACGGAGT
G-----TT-------TTTTTTAT----------------------GCGGTGATTTGATGG--GCCT-TTC----------
---GTGTTATCCGCTAACCAAAGTATATTTATGTGGGGAAATTTC-TGCGTCGGGGGCTCCATGTACTATATTGGTGCTA
CAATATCACATAGTGGTGCTTCTTTTT-TTAGGTGGTGGAGG--------------------------------------
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>chr5B_257
GTGC----------------------------------------------------------------------------
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----------------------GTTTAGTTGAGTTAATACCTTAGGGAGTTCATATTTGACTTCACCAGGAGATATTTGA
GGGAACTCTACGACCGTTTGCTCAACAAACCATATAAGGAGCAATTGATTTCTCCATGCTGATATAGGGAAACAAGATTA
GGATTTTTCGTTTTTCACTTTTACAATGGAAATGCTTCACTTTGTTGCTGATGCGTACAAACACAAAGAGCATCTACAAG
CAGAGAACAACGGAAAAATTAGATCTAATAATATTGATCTATTGGCACTACACAGACTTCACATTAAAGAAACAAATACC
AA-TTTTAGCTGGTTACAAAGCATCGTCGACACAGAAAGGCTCGCCTCTTAAAATTATCAAACAATGACATGAACATAAT
GAATGCAGTAATATTC--CTCTAGGATGTTCTCATGTTTCACTAACCTATGTGTATTACATGCATCATTTTTCATAACTT
TGAG----------------------------------------------------------------------------
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----------------------------------------------------------GATAAGAATACGTATAATATAT
GTCATTAATTACCAAATTATTATTGTACTTCAACTATTGTGAACAAAAGTTAACCAAAAACGGAGACCACCTTTTAATAC
TTGGTCATGATATCTTATGGATGCACTTAGATGTCTTTGTCTAGAAGTCTAGATATGGCACGTCATTTTTCATATCCTTT
GGACTTTATGTGTTATCACTCTTGCTTTCAATTGGGACCGCCTATTAGTACACTTGGTAATCTTATCTTGTGGATGCACC
TTTATATATCTTTTATCAAAAATCTAGAAGTTCTCAGTTGCCACGCAATTCCATATCCTTTTGACATTATATATTGTCCC
T-TGGCTCTTGTTGGAATGTATACTGGAAG-ATGGACAGAAGGTCTGTCATCGCTTGTTTTCTGGTGATGCTTGTGTTGT
TCGAAAGCGCATCTGCAGGTGTGTTCTCACATTTGTTGTTCTTAATTAAGTAGAGTTACTTCTCTCT--AAAAAAAAGTA
GAGTCCCTAGAGTAGATGTTATTTCAAAAGAATAACCTTGAAATATCTACATAAGATTTCAAGTCGTATTACCAATAGTT
TTCTCAAATATGATGTTAATACAGATTGCGTGCATGTCCTTGAGGCTTTTCGCATCGTACCGCTTTTATGCAGCGTTGGA
AAAATCATGTGTTACAATCAATGTCTCATTATTATGGTATTAATTTTCATTGGTTTGTGATGCGCAGACTGTGAGGATGT
TCAATTTCAGATCTTGTTCTGCGTCCAATCATCATGTGAGGATATATGCAAGTATCAGTGGAAGGGTAAGAAGGTCTACA
AGCCTTGGTGCGATAAGTTCTTCGGTGGCTACTGCCACTGCAAGATTTGCCATGATGAATAGAACTTAATGGATATGTTA
GGCGCACTTCATGCTAGAAATAAATAATGCATAACTTTGTGTCCTGAACCACTGATTTATGCATGCGATTGTATGCTTGG
GAGAGCGTCATGCCATGTGAGACATAGGCCTTGTTTAGATACTCTAACTTAGCTAGAGGTTAGAGTTAGTTTCTAGCTCA
TGACTAACCCTGAACTAACTCTAGCCAAAGAGTTGTTTGGATGACAGGGTTAGATTGATAATAAATGCACTTTCTCAATC
ATTTGGCTCATTTAAACCCACTTTAAAGGGGAGAGATCTGGTGTGGGGGATAGAGAGATAAAAAGTGTTTTTTTAGTGGG
CCCCATGAGAACTAGCTCCAATTAGCAACTCTTGGTGGGATAGTTTTTCGGGTGGGTTCGATGCAACTAGCTCAAACTAG
CCCTCATGTTTGGATACTTTAGGGCTATTTGAGCTCAAACTAGCTCAAACAAACTCTAACCCATGGATCCAAACATGGCC
ATAATCTATACTAGAAGGGTTGGA-CATGC--TATGCTGGATCGTTGGTGTTGTTGGGTTTCCGGTTTCCCAAAAAACAT
-TACTCACCAT----CTTTCAAAATATAAGGT------GTAT----TTTTTTTTTGAAAAGTCCAACATTTTAAGTTCGA
TCAAATTTGTAGAGAAATATATCAAAATTCATAGTATCAAATTGGTATGATTAGATTCATCTTGAAATGAATTTCCATA-
C-TTTTT----GTTTAATATTATGGATGTCGAT-ATTTTTT-CCTCTGAGCTTGGTCAAAGTTAAAAAAAGA------TC
CCAAAAA-AGTAATACCCCTTATATTT-TGAAACTGGT----GGAATATTTAGTTTGGCCGGTGTGGGAGATGATGGAGT
GT-GTGTT-------TTCTTTAT----------------------GCGGTGATTTGATGG--GCCT-TTC----------
---GTGTTATCCGCTAACCAATGTATATTTATGTGAGGAAACTTC-TGTGTCACTGGCTCCATGTACTATATTGGTGCTA
CAATATCACATGGTGGCACTTCTTTTT-CTAGGCGGTGGGAGGGTGCGCAGAATTGATGTG-TTTTTATAGGCCGGTTGC
TACTGATTAATTTGAGAAATCATTGGCACGGTCAAAATCGTATACCAAATCC-AAAATTGTATACCTCAATTGCATTAAA
GAGCTTCAAAATTAGCGAA-CATAGAGAATTAAAAGAA-TCATATGGGAAAACTCGTTGAGAAATTGTTGAGCCGGTTAA
AATCGGA-TGACCCCAATCTAAATTGAATATCTCAATTAATTGTGCTCAATTGAATGTGGGCTCTTTAAAACTAGGGGGC
ATAGTGTTATAGAGGATTGTCTCATGGAAAAGATGTTTAAAGGCAAATATCGTATACTCCCTTTCTCCCATATTATAAGA
GCACTACTGTAAAAAAA------------------------------------
>chr7A_1701
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ATCATCAAAACTAGAAGGGTTGGA-TGCAC--TTTGCTACGACGTAGGTGTTGTTGAGTTTCTT-------AAAAAA-AA
-TACTCACTCT----GTTTCAAAATATAAGGT------GTACAGTATTATTTTTTTTAAAGTCAAAATTTTTAAGTTTGA
TCAAATTTGTAGAGAAATATATCAAAATTCATAATATCAAATCTGTATGATTAGATTTATCATGAAATGTATTTCTATA-
CTTTTTT----GTTTAATATTGTGGATGTCGAT-ATTTTTT-GCTCTAAATTTGGTCAGAGTTAAAGAAATGTGAC-TTT
CCAAAAA-ACTAATACCCCTTATATTT-TAGAACTGAT----GGAATATTTAGTTTGACAAGTGGGGGTGATGATGGGGT
GA-GTTTTATTTTTATTTATAAT----------------------GTTGTGATTTGATGG--GCCT-TTTGTAGTGTGGT
TCTGTGTTATCTGTTAACCAATGTATATTTATCTGAGGAAAATTTCTACGTCGGTGGCTGCATGTATTATATTGGTGCTA
CAGTATCACATAATGCACTTCTTTTTT-CTAGGGGGTGAAAAGTTG-----------TGTG-TTTTTATAGGCCGGTTGT
TGCTGATTGATTTGAAAAATCATTGGCCTAGTCAAAATCGTAAACCAAATCT-AAAATTGAATACATCAATTGAATGAAA
GAGCTTCAAAAT--AGGAA-CACAGTGAATTAACGGAA-TTGAATGGGAGAGC-CCTTGAGAAATTGTTGACCCGATCAA
AATCGATCTGACCTAATTCTAAATTGAATACCTCAATTAATTG-------------------------------------
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>chr6A_1704
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---ATATATACTAGAAGGGTTGGGGCATGC--TTTGTTGCGCCATTGGTGTTGTTCGGTTTCTT-------AAAAGA-AA
-TACCCACCCC----ATTTCAAAATATAAGGT------GTAC----TACTTTTCTGAAAAGTCAAACCTTTTAAGTTTGA
TCAAATTTGTAGAGAAATATATCAAAATCCATAATATCAAATCGGTATGATTAGATTCATCATGAAATGAATTTC-ATAC
TTTTTTT----GTTTTTTATTGTGTGTGTCGAT-ATTTTTTTGCTCTAAAATTGGTCAAAATTAAAGAAATTTCAC-TT-
CCAAAAA-AATAATACCCCTTATATTT-TGGAACCGAT----GAAATATTTAGTTTAGTGGGTGGGGGAGATGAGGGAGT
GT-GTTTTATTTTTATTTGTAAT----------------------ACAGTGATTTGATCG--GTCT-TTCGTGTTGTGAT
TCTGTGTTATCCGCTAACCAACGTATATTGATGTAGGAAAATTTT-GGCGTGGATGGTTGCATGTACTATATTGATGCCA
TAGTATCACATGGTGGCGTTTCTTTTTTCTAGGTGGTGGAAGGGTGTGTGTGATTGATATT-TTTTTATAGGCCAGTTGA
TCTTGATTGATTTAGAAAATCGTTAGCCCCGTCAAAATCGTATACCAAATTC-AAAATTGAATACCTCAATTGAATGAAA
GAGCATCAAA-TTAAGGAA-CACAGAAAATTAAAAGAA-TTGAATGAAAGAGCTTGTTGAGAAATTGTTTACCTGGTCAA
AATCAGG-TGGCCCATGTGTAAATTGAGGACCTAAATTAATTGTG-----------------------------------
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>chr1A_1707
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------TATACTAGAAGGGTTGGG-CGTGC--TTTGCTGCATTGTTGGTGTTGTTGGGTTTCTT-------AAAAAA-AA
-TT---ACCCT----GTTTCAAAATATAAGGC------TTAT----TACATTTTTGAGAAGGCAAACCTTTTAAGTTTGA
TCAAATTTGTAGAGAAATATATCAAAATCCATAATATCAAATCGGTGTATTTAGATTCATCATGAAATGAATTTCGATA-
-TTTTTT----GTTTAATATTATGGATGTCGAT-ATTTTT--GCTCTGAATTTGGTCAAAGTTAAAGAAATTTGACTTT-
TTAAATA-ACTAATACCCCTTATATTT-TGGAACTGAT----GGAATATTAAGTTTGGAGGGTGGGAGAGATGATAGAGT
GT-GTTTTACTTTTGTTTATAAT----------------------GCTTTAATTTGTTGG--GCTT-TTCATGGTGTCAT
TAAGTGTTATCTGCTAACCAACATATATT-ATGTGGAGAAATTTC-TGTTTTGGTGTTTGCAT-TACTATATTGGTGCTA
CAATATCACATGGTAACACTTCTTTTTTCTAGGTAGTGGGAGGGTGCATCGGATTGATATG-TTTTTATAAGCCAGTTAC
TGCTGATTGGTTTGAAAAATTGTTCGTCCGGTCAAAATCGTAAACCAAATCC-AAAATTGAATATCTCAATTGAATGAAA
GAGCTTCAAAATTAGGGAA-CATAGTGAATTAAATGAA-TTGAATGGGAGG---TCCTGATAAATTGTTGACCTGGTCAA
AATCGAA-TGACACAATTCTAAATTGAATACCTCAATTAATTGTG-----------------------------------
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>chr1B_1707
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------TATACTATAAGGTTTATG-CGTGC--TTTGCTGCGTCGTTCGTGTTGTTGGCTTTCTT-------AAAAGA-AT
AAC------CACCCTACTTTAAAATATAAGGT------GTAT--TGCTTTTTT--GAAAAGT-CAAACTTTTAAGTTTGA
TCAAATTTATAGAGAAATATA---AAATCCACATTATCAGATTGATACTTTTAGATTCATCACGAAATGAATTTCCATGC
CTTATTT----GTTTAATATTGTGGATGTCGAT-ATTTTT--GCTCTAAACTTGGTCAAAGTTAAAGAAATTTGACTTT-
ATAAAAA-ACGAACATCCCTTATATTT-TATAA-CGGT----GGAATATTTAGTTTGGCAGGTGGGGGATATGATAGAGT
CT-GTTTTATTTTTATTTATAAT----------------------GT------------------------T-GTGTTAT
TATGTGTTATCCGCCAACCAACCTATATTTATGCGGGAAAATTTT-TGTGTCGGTGGTTGCATGTATTATATTGATGCTA
CAATATCACATGGTGACGTTTCTTTTTTCTAGGTGGTGGGAGGATGCGCGGGATTGATATA-TTTTTATAGGTCGGTTGC
TACTGGTTGATTTGAAAAACCGTTGGCCCGGTCAAAATCGTAAAACAAA-TC-AAAATTGAATACCTCAATAGAATGAAA
GAGCTTCAAAATTTGAAAA-TGTAGCGAATTAAAAGAA-TTATATGGGAGAA---CTTAAGAAACTATTGACCCATTCAA
AATTGAA-TGACCCAACTCTAAATTGAATACCTCAATTAATTGTGC----------------------------------
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>chr7B_1708
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-------ATACTAGAAGGGTTGGG-CGCGC--TGTGCTGCACCGTTGTTGTTGTTGGATTTCTT-------AAAAAAG--
------ACTCACTCTCTTTTAAAATATCAGGT------ATAT--TACTG---TTTGAAAAGGCAAATATTTTAAGTTTGA
TCAAATTTGTAGAGAAATGTATCAAAATCCATAATATCATATTTATACTTTTAGATTCATCATGAAATGAATTTCCATA-
C---TTT----GTTTAATATTGTGGATGTTGAT-ATTTTT--GCTCTGAACTTGGTCAAAGTTAAAGAAATTTGACTTT-
CCAAAAAAATTAATACCCCTTATATTTCTGGAACTGAC----GGAATATTTAGTTTTGCAGGTAGGGGAGATGATAGAGT
GT-CTTTTATCTTTATTTATAATTGGTTGATATGGTGGGCCTTTCGT------------------------T-GTGTGAT
TTTCTGTTATCCGCTAAACAGTCTTTATTTATGTGGAGAAATTTA-TGTGTTAGTGGTTGCATATACTATATTGATGCTA
CAATATCACATGGTGACGCTTCTTTTTTCTAGGTGGTGGGAGGGTGTTTGGGATGGATATG-TTTTTATAGTCTAGTTGC
TGCTGATTGATTTGAAAAATTATTGGCGTAGTCAAAATCGTAAACCAAATCC-AAAATTGAATACCTCAATTGAATGAAA
GAGCCTCAAAATTAGGGAAACATAGTGTATTAAAAGAA-TTGAATCGAAGAG---CTTGAGAAATTGTTGACCCGGTCAA
AATCATA-CGACACAATTCTAAATTGAATACCTTGATTAATTGTG-----------------------------------
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>chr2D_1709
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--------TACTAGAAGGGTTGGG-TGTGC--TTTGCTGCACCATTGGTGTTATTGGGTTTCTT-------AAAAAA-AG
-TT---ACTCACTCGGTTTCAAAACATAAGGT------GTAT--TACTTTTTTTTAAAAAGTCAAACCTTTTAAGTTTGA
TCAAATTTGTAGATAAATAAATCAGAATCTATAATATCAAATCAGTATGATTAGATTCATCTTGAAATAAATTTCCGTA-
C---TTTTTT-GTTTAATAATGTGGATG-CGGT-TTTTTT--GCTCTGAAC-TGGTCAAAGTTAAAGAAAATTAACTTT-
CCAAAAA-G-TAATACCCCTTGTATTT-TGGAACTGAT----GGAATATTTAGTTTGACCGGTGGGG-AGATGATGGATT
TGTG------TTTTTTTTATAAT----------------------GCGGTGATTTGATGG--GTCT-TTCGTGATGTGGT
TCCGTGTTATCCGCTAACCAACGTATGTTTATGTGGGGAAATTTC-TGCGTCAGTGGTTGCATGTACTATATTGGTGCTA
CAACATCACATGGTGGTGCTTCTTTTTTCTAGGTGGTGGGAGGGTGCGCGGAATTGATGTG-TTTTTATAGGCCGGTTGC
TGCTGATTGACTTGAAAAATTGTTGGCCCGGTCAAAATCATATACTTAATCCAAAAGTTGAATACCTTAATTGCATGAAA
GAGCATCAAAATTAGGGAA-CATAGGGAATTAAAAGAA-TTGAATGAGAGAGCTTCTTGAGAAATTGTTGACCCGGTCAA
AATCGGG-TGACCCAATTATAAATTCAACACCTCAATTAATAGTG-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr2D_1709
--------------------------------------------------------------------------------
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--------TACTGGAAGGGTTGGA-CGCGC--TTTGCTGCGCCGTTGGTGTTGTTGGGTTTCTT-------AAAAAT-AA
--T---ACTCACTTTGTTTCAAAATATAAGGT------ATAT--TACTTTTTT--GAAATGC-CAAACCTTTTAGTTTGA
TCAAATTTGTAGAGAAATATATATAAATCCATAATATCAAATCGGTATGATTAGATTCATCATGAAATGAATTTTCATA-
C---TTTTTT-GTTTAATATTGTGGATATCGATATTTTTT--GCTCTGAACTTTGTCAAAGTTAAAGAGATTCGACTTT-
CCAAAAA-GCTTACACCCCTTATATTT-TGGAACTGGT----GAAATATTTAGTTTGGCCAGCGGCGGAGATGATGGAGT
GT-GTTTTATTTTTATTTATAAT----------------------GCGGTGATTTGATGG--GCCT-T-CATGGTGTGGT
TTGGTGTGATATGCTAACCAACGTATATTTATGTGAGAAAATATC-TACGTCGGCGGATGCATGTACTATATTGGTGCTA
CAGTATCAGATGATGGCGCTTATTTTTTCTAGAAGGTGGGACGGTACATGCAAATGATGTG-ATTTTATAGGT-GGTTGC
TTTTGATTGATTTAAAAAATCGTTGGCCCGGTCAAATA-ATATACCAAATCC-AAAATTGAGCACCTCAATTGCATGAAA
GAGCTTTCAAATTCGGGAA-CATAGGAAATTAATTATTTTTGAAAAGGAGAGCTCTTTCAGAAATTATTGACCCGGTCAA
AATTGGG-TGACCCAATTCTAAATTGAATATCTCAATTAATT--------------------------------------
--------------------------------------------------------------------------------
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>chr6D_1710
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---------ACTAGAAGGGTTGGG-CGCGT--TTTGCTGCACCATTGATGTTGTTGAGTTTCTT-------ACAAAAC--
------ACTCACTCTATTTCAAAATAAAGG----------------TACTTTTTTGAAAAGTCAAACCTTTTAAGTTTGA
TCAAATTTATAGAGAAGTATATCAAAATCCACAATATCAAATCGGTATGATTAGATTCATCATTAAATGAATTTTCATT-
A---TTTTTT-CTTTAATATTGTGGATGTCGATATTTTTT--GCTCTCAACTTGGTCAAAGTTAAAGAAATTTGACTTT-
CCAAAAA-ACTAATACCCCTTATATTT-TGAAACTGAT----GGAATATTTAGTTTGGCCGGTGGGGGAGATGATGGAGT
GT-GTTTT------TTTTATAAT----------------------GCAATGATTTGATGG--GACT-TTTGTGGTGTGGT
ACTGTGTTATCAGCTAACCAATGTATATTTATGTTGGAAAATTTC-TGTGTCGGTGGTTGTATGTACTACATTTGTGCTA
CAATATCACATGGTGGCGCTTCTTTTT-CTAGGTGGCGGGAGGGTGCACGGAATTGATGTA-TTTTTATTGGCCAGTTGC
TGCTGATTGATTTGAAAAATCGTTGGCCCGATCAAAATCCTATATCAAATCC-AAAATTGAATATCTCAATTGCATTAAA
AACCTTCAAAATTAGGGAA-CATAAGAAATTAAA-GAA-TTGAAC-GGAGAACTCTTTGAGAAATTGTTGACCCGATCAA
AATT-GG-TGACCCAATTCAAAATTCAACACCTCAATTAATTGTG-----------------------------------
--------------------------------------------------------------------------------
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>chr1D_1712
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-----------TAGAAGGGTTGGG-CGCAC--TTTGCTGCGCCGTTGGTGTTGTTGGGTTTCTT-------AAAAAA-AT
ATT---AATCACTTTATTTCAAAATATAAGGT------GTAT--TACTTCTTT--GAAAAGT-CAAACCTTTTAGTTTGA
TCAAATTTGTAGAGAAATATATCAAAATCCATAATATCAAATCGGTATGATTAGATTCATCATCAAATGAATTTTCATA-
T---TTTTTTGGTTTAATATTGTGGATACCGAT-ATTTTT--GCTATGAACTTGGTCAAAGTTAAAGAAATTCAACTTT-
TC-AAAA-ACTAATACCCCTTATAGTT-TGGAACTGAT----GGAATATTTTGTTTGATGGGTGGAGGAGATGATGGAGT
GT-GTTTAATTTCTACTTATAAT----------------------GTGATGATTTGGTGG--CCTT-T-CGT-GGTTGAT
TCTATGTTATCCACTAACCAACTTATATTTATGTGGAGAAATTTC-TGTGTCATTGGCTGCATGTATTATATTGGTGCTA
CAGTATCTCATTGT--------TTTTC-CTAGATGGTGGGAGGGTGCGCGGG-TTGATATA-TTTTTATAGGCCAGTTGT
TGCTGATTGATTTGAAAAATCGTTGGCCCAGTCAAAATTGTAAACCAAATCC-AAAATCGAATATCTCAATTAAATGAAA
GAGCTTCAAAATTTGGAAA-CATAGTGAATTAAAATGA-TTAG-TGGGGGAG---TTTGAGAAATTGTTGACCCGATCAA
AATTGGG-TGACCCAATTCTAAATTGAAAATCTCAATCAATTGTG-----------------------------------
--------------------------------------------------------------------------------
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>chr3A_1715
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--------------AAGGGTTGGG-CGCGC--TTTGCTGCGCCGTTTGTGTTGTTGGGTTTCTA-------AAAAAA-AA
-CT---AATCACT--GTTTCAAAATATAAGGT------GTAT----TACTTTTTTGGAAAGTCAAACATTTTAAGTTTGA
TCAAATTTGTAGAGAAATATATCAAAATCCATAATATCATATCAGTATTTTTAGATTCATCATGAAATGAATTTTCATAT
ATTTTTT----GTTTAATATTGTGAATGTCGAT-GTTTTT--TCTCTCAACTTGGTCAAATTTAAAGAAATTTGACTTT-
CTAAAAA-ACTAATACCCTTTATATTT-TGGAACTGAT----GGAATATTAAGTTTGGTAGGTAGGGGAGATGATAGAGT
GT-TTTTTATTATTATTTATAAT----------------------GCGTTGATTTGGTGG--GGCTATTTGTGGTGTGAT
TATGTGTTATCCGCTAACTGATCTATATTTATGTGGAGAAATTTC-TGTGTCGGTGCTTGCATATACTATATTAGTGCTA
CAATATCACATGGTGACACTTCTTTTTTCTAGGTGGTGAGAGGGTGCGTGGGATTGATATG-TTTTTATAGGCCGGTTGC
TGCTAATTGATTTGAAAAATTGTTGGCCCGATCAAAATCGTAAACCAGATCC-AAAATTGAATACCTCAATTGAATGGAA
GAGCTTTGAAATTACGGAA-CATGGTGAATTAAAAGAA-TTAAATGGGAGAG---CTTGAGAAATTGTTGACCCGGTTAA
AATTGGA-TGACGCAATTCTAAATTGAATACCTCAATTAATTGTG-----------------------------------
--------------------------------------------------------------------------------
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>chrUn_1779
TCACT---------------------------------------------------------------------------
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-----------CT--GTTTC-AAATACAAGGT------GTAT----TGCTTTTTTGAAAAGGCAAACCTTTTAAGTTTGA
TCAAATTTGTAGAGAAATATATCAAAATTCATAATATCAAATCGGTATTTTTGGTTTCATCATGAAATGGATTTCCATA-
CTTTTTT----GTTTGATATCGTGGATGTCAAT-ATTTTT--GCTCTGAACTTGGTCAAAGTTAAATAAATTTGACTCT-
CTAAAAT-ATTAATGTCCCTTATATAT-TTGGAACT---GATGAAATATTTAGTTTGGCGTGTGGTTGAGATGATA----
GT-GTTTTATTTATATTTATAAT----------------------GCGTTGATTTGGTGATTGATT-TATGTGGTCTAAT
TCTGTGCTATCCGCTAACCAACCTATATTTATGTGGGGAAATTTC-AGTC-TGGTAGTTGCATATACTATATTGGTACTG
CAATATCACATGGTGGCGCCTCTTTTTTCTAGGTGGTGGGAGGGTGCATGTGATTGATATGTTTTTTATAGGCCGGTTGC
TGCTGATTGATTTGAAAAATCGTTGGCCCGGTCAAAATCGTAAACTAAATCC-AAAATTAAATACCTCGATTGAATGAAA
GAGCTTCAAAATTAGAAAA-CATAGTGAATTAAAAGAA-TTAAACGGGAGAG---TTTGAGAAATTGTTGACGGGTC--A
AAATGGA-TGACCCAATTCTAAATTGAATACCTCAATTAATTGT------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr3A_1781
ACCTA---------------------------------------------------------------------------
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------------T--GTTTCAAAATATAAGGGGTAGGAGTAT----TATTTTTCTGGAAAGTCTAACCTTTTAAGTTTGA
TCAAATTTATAGAGAAGTATATCAAAATCCATAATATCAACTCCATATGATTAGATTCATCATGAAATGAATTCCCATT-
TTTTT----------AATATTATGGATG-CGATATTTTTT--GTTCTGATCTTGCTCAAAGTTAAAGAAATTTGACTTT-
TCAAAAA-ACTAATACCCCTTATATTT-TGGTGCTGATAGAAGGAATATTTAGTCTGGCTGGTGGGGGAGATGATGGAGT
GTATTTTATTTATTATTTATAAT----------------------AAGGTGATTCCATGG--GCCT-TTTGTGGTGTGGT
TTTGTGCTATCTGCTAACCAATGTATATTTATGTGGGGAAATTTC-TATGTGGGTAGCTGCATTTACTATATTGATG-TA
CAATATCACATGGTGACACTTCTTTTT-CTAG-TGGTGGGAGGGTGTGTGGAATTGATGTG-TTTTTATAGGCCGGTTGT
TGCTAATTGATTTGAAAAATCGTTGGCCCGGTCAAAATCGTATACCAAATCC-AAAATTGAATACCGCAATTGCATGAAA
AAGCTTCAAAATTAGGGAA-CATAGGACAATAAAAGAA-TTAAATGGAAGAGCTCCTTGAGAATTTGTTGATCTGATCAA
AATTGGG-TGACCCAATTATAAATTGAACAACTCAATT------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>SNPs
----------S--------------S-------------------S--S-------------S------S----------
----------------S--------------------------------------S--S---------------------
-------------------------S---------S---------S----------------------------------
---S----S--------S--------------------------------------------------------------
-------S-------S--------------------------S--------SS-----------------S---------
S-------------------------------------------------------------------------------
------------------S---------------------------------S------------------S--------
--S----------------------------------------S--------------------------------S---
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------S-------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------S-------------------------------S---------------------------------
--------------------------------------------------S-----------------------------
-----------S--------------------------------------------------------------------
-----------------------------------S-----------------------------S-SS-----------
------------------------------------------------------------S-------------------
-----------S----------------S---S------S-----S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------S-----------------------
----------------------------------------------S---------------------------------
S--S--S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S----------------SS-------------S-----------S--S-S-SSS-------------
------------------------------------------------------S-------------------------
----------------------------------------------------------------------S---------
--S-------------S-----------------------------S----------------------S----------
--------------------------S-----------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
------------------------------S----S--------------------------------------------
---------------------------------------------------------------------S----------
--S----------------------------------------------------S---------S--------------
-------------------------------------------------------------------S-------S--S-
--------------------------------S-----S---------------------S-SSS--S----S-------
-----SS----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_363
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------AACAAACCATGCAAGGACCG-------------------------------------
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>reverse_3204
--------------------------------------------------------------------------------
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---CGCATCATGCCATGTGAGAC---------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
