>input_sequence_73828
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-------------------------------------------------------ATGGAGGGCGGCTGCGGCGTGGCCG
GCGGGACGGAGGGCG------GCAAGAAGCAGCAGCAGCAGGCGCGGCCGCAGTTCGGGCGGTCGCTGACGTACCACCAC
CA---------CCAGGGGCACCGGCTGCTGCCGCGGTGGCGGCGGCCGCAGC---TGGCGGACGAGCCCCGCGCGCGGCC
GCAGGCGGTGGTGCTCTACACGACGTCGCTGCGCGGGGTGCGGCGCACCTTCGCGGACTGCTCCGCGGCGCGCGCCATCC
TGCGGGGGTCCCGCGTCGCCGTCGACGAGCGCGACGTGTCCATGGACGCGGCGCTCCGGCGCGAGCTGCAGGCGCTGCTG
GCCGCGCGGGGCCGCGCCTTCTCGCTCCCGCAGCTCTTCATAGGGGGCCGGCTCGTCGGTGGCGCCGACGAGGTCCGGCA
GCTGGACGAGTCCGGCCAGCTCCGGCGCCTCCTCGAGGGCGCCGCGGGGCAGGACCCGGCCTTCGTCTGCGACGCCTGCG
GCGGGGTCCGCTTCGTCCCCTGCCCGGCCTGCGCCGGCAGCCGCAAGGTGTTCGACGAGGAGGAGGACCGCGCCCTCCGC
TGCGGCGACTGCAACGAGAACGGGCTGGTGCGCTGCGCCAACTGCTCCTCCTGA--------------------------
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--------------------------------------------------
>chr2B_1_TraesCS2B01G150900
AATAAAATAAGTAAAATAT-TTTTTTGTAGGCTATGGTAATTCACCACAATGTCAAATATAAGTTAACTATTCACATAAT
ATAAGAGTGTTTTTTTGGTTGTCAATATAAGAGCGTTTTTGACACTATTGTAGTGTTAAAAACGCTTTCATATTATATGA
CGGG-GAGTAGTAGCTAATTGTCCATGCTCTGTCCCTATTAAGTCCTCCAAAACGATCTGCCCCAGTCAAAACCTCCTGA
ACCAGAATGAGCAGAGAGCCGTGTGCCATTTCTCCTACTTGCGCTGTCAAGAGAATATGGATCACACAAAATAGAGAAAA
AGGAGAAGTTAGGGTGAAGAATATGACAGGCTCTCGTTGAGGCCGGGCACGGAAAAACGTTCAAGAACCTTCCTT-CCAG
CTGCAAAAGAGTACCACAAGT------CCATTCCCACCGGTAATAACTGCCACGCCC---------------------AG
CTAGCCACTCAG-CTACTCACAAAGTATAGCAAGTA--------------------------------------------
--------------------------------------------------------------------------------
TCAACCACAAAAACTA---ACCAAATAAACATAAAATGCTTCCAAACTAAGCAAAGAAGCGCCCAAAAATGCTTATCTTT
AGTTACCTTTTACACACCTGCTGGCTCCAACTGGAAACGGCGTCCGTGTCTCAATTACTTGCTGGTTTTAGTAGAGAAAT
TAGTTGCTAAATTGGCTGTGCGTGCCATTTTTGCTCGCAAGATTTAGCTGGTGAATCAGTAGCTGAGTTGTTTTTGACAC
ACTCAGCATC---AA------GAGGAGGAGAACCAAAGTAAAAGCAACGAGGAAACTTCCACCGGGAGAAGAAAAGAAAA
------TATATATA--CGCCACCGCTAACTAAACCCCACCTCGATCCACCTTCCGGCGAAACCAATTCATTGCTCGCTTT
CGCAAGACTCTTTCTTTCTCCCCTTTCCTCT-CCCCCAACCCGTCCGTCGTCGCCTCCGCCCGAGGTAACCG--------
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-------------------------------------------------------------------CCATAGCCACGAG
GAATCAAGAACCTTGCCTGTCGCACGTCGTCCCTGAGGACCGAGAAGAGAT----ATGGAGGGCGGCTGCGGCGTGGCCG
GCGGGACGGAGGGCG------GCAAGAAGCAGCAGCAGCAGGCGCGGCCGCAGTTCGGGCGGTCGCTGACGTACCACCAC
CA---------CCAGGGGCACCGGCTGCTGCCGCGGTGGCGGCGGCCGCAGC---TGGCGGACGAGCCCCGCGCGCGGCC
GCAGGCGGTGGTGCTCTACACGACGTCGCTGCGCGGGGTGCGGCGCACCTTCGCGGACTGCTCCGCGGCGCGCGCCATCC
TGCGGGGGTCCCGCGTCGCCGTCGACGAGCGCGACGTGTCCATGGACGCGGCGCTCCGGCGCGAGCTGCAGGCGCTGCTG
GCCGCGCGGGGCCGCGCCTTCTCGCTCCCGCAGCTCTTCATAGGGGGCCGGCTCGTCGGTGGCGCCGACGAGGTCCGGCA
GCTGGACGAGTCCGGCCAGCTCCGGCGCCTCCTCGAGGGCGCCGCGGGGCAGGACCCGGCCTTCGTCTGCGACGCCTGCG
GCGGGGTCCGCTTCGTCCCCTGCCCGGCCTGCGCCGGCAGCCGCAAGGTGTTCGACGAGGAGGAGGACCGCGCCCTCCGC
TGCGGCGACTGCAACGAGAACGGGCTGGTGCGCTGCGCCAACTGCTCCTCCTGATCCGTCCCCT---CTAATTGAATTCA
AGGGTTAGAGTTGGTAGGTTCATCGTCAGTCAGATCAGAGAGAGGCGC-----ATTTTCGGTTTCTTGGAGTTCT-----
---TGATTTATG---------TATCCTGAATCAATCAATCAAT----CCG-ATCGTTTGGGGATCGGATTGTTAGCTGCT
CATGGATG---GAAGAGAACGAATTGTTCTTGGCTCCTTG--------CTGCGGGAATCGCCGCCCGGTGGTGGCGGTCG
ATGATGAATAAGAGCCGGTGCTTGTATATGTGTGTAAAATTTGGTGCTGATATTAGCCTGATTGATTAATGTATAAGGAA
GAACTGATGTAAATACTTGAGCTTTGCGAGTGCTCAATTCTTGCCCAGTTCCCTGTTTATCCATGTTTTTTGATCAATTC
TGTTCATGGATG---TACAGTAGCAATACAGTTCGATACCTCATCAAGAACTGGCACAGCTGTACTAACATAAAGTCTTG
AGGGCCGAAA-TCA-GTTGTGATCGACTGTACTAC----TCAGAAGCTGTACTCATGCTGTTCTATAGCTGTTTTCTA--
---------AATTAGAGCCACGTCTTCTGTTCTTTAATC-----ATG--CAAGGTCAGTTCGGT----ATTTAACAAGTC
TTGAGCCTGGGGTGATTAATTCTTGCA-TAGTT-----------------------------------------------
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-------------------------------------------------CTTTATCTGAACTCTTTATCTTTTATTGCTT
---TG---ATCCATCTTATAACTACACGGTTTGATTTCTTCATGCACAGATGG--CATTCCATGGATGTACAGTTATAT-
--------------------------------------------------------------------------------
--------------ACATCTTAATTAAAACAATGTGATCGATGGTCATCCGGAAATGATCATGATCTGACTGTACTTACT
AAAAGTCCTTAATCATGTTGCACTCGAGTTGTTATCTAAAAGTGCAGCCACCTC-TTCTTTTCTTTAAGATTCGCTGAGA
TAATGTGACCATGGTGATCAATTCATCCACAAGAACTTTCGATGATCTCAAGAGATAAA---AGAAAAGAAAAACTTATA
ATTGATTTAGCTAGAAGTCCACTGTATTTTGATCATGATCTGGTAAAAAG
>chr2A_1
AATAAAACAAGTAAAATATGTTTTTTGTAGGCTATGGTAATTCACCACAATGTCAAATCTAAATTAACTATTTACATAAT
ATAAGAGCGTTTTTTTTGCGTTCAATATATAAGCGTTTTTTGCATTACTATAGTGTCAAAAACACTTTTATATTATGGAT
CGGGGGAGCAGTAGCTAACTGTCCATGCTCTGTCCCTATTAAGTCCTCCAAAACGATCTGCCCCAGGCAAAACCTCCTGA
ACCAAAATGAGCAGAGAGCCGTGTGCTGCTTCTCCTATTTGCGCTGCCAACAGAACATGGTTCACACAAAATAGAGAAAA
AGTAAGAGTTAGGGTGAAGAAAATGACAGGCTCTCATTGAGGCCGAGCACAACAAAACGTTCAAGAACCTTCCTT-CCAG
CTGCAAAAGAGTACCACAAGTCCTTTCCCATTCCCACAGGTAATAACGGCCACACCC---------------------AG
CTAGCCGTTCAGTCTACTCGCAAAGTATAGCAAGTACTCTCTCCGTCCGGAAATACTTATCATCAAAATAAATAAAAGGG
ATGTATCTAGACGTATTTTAATTCTAGATACGCCTTTTTTTATTCATTTTGATGACAACTATTTTCGGACGGAGGGAGTA
GCAACCACAAAAACTA---ACCAAATAAACATAAATTGCTTCCAAACCAAGAAAAGAATCCCACAAAATTGCTTAGTTTT
TGTCACCGCCC--------GCTGGTTCCAACTGGAAACGGCCTCCGTTTCTCAATTAGTTGCTGGTTTTAGTCGATAAAT
TAGTTGCTAAATCGGCTGTGCGTGCCATTTTTGCTCACAAGATTTG--------------------GTTGTTTTTGACAC
ACTCAGCATC---AAGAAGAGGAGGAGGAGAACCAAAGTAAAAGCAACGAGGAAACTTCCGCCGGGAGAAGAAAAGAAAA
GAGTAATATATATA--CGCCAGCACTAAGTAAACCCCACCTCGATCCACCTTCCGGCGAAACCAATTCATTGCTCGCTTT
CGCAAGACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATAGCCACGAG
GAATCAAGAACCTTGCCCGTCGCACGCCGTCCCTGAGGACCAAGAGGAAGAGACGATGGAGGGCGGCTGCGGCG------
---GGACGGAGGGCGGTTGCGGCAAGAAGCAGCAGCCGCGC---------CAGTTTGGGCGGTCGCTGACGTACCACCAC
CA---------CCAGGGGCACCGGCTGCTGCCCCGGTGGCGGCGGCCGCAGCAGCTGGCGGACGAGCCCCGCGCGCGGCC
GCAGGCGGTGGTGCTCTACACGACGTCGCTGCGCGGGGTGCGGCGCACCTTCGCGGACTGCTCCGCGGCGCGCGCCATCC
TGCGGGGCTCCCGCGTCGCCGTCGACGAGCGCGACGTGTCCATGGACGCGGCGCTCCGGCGCGAGCTGCAGGCGCTGCTG
GCCGCGCGGGGCCGCGCCTTCTCGCTCCCGCGGCTCTTCATCGGGGGCCGGCTCGTGGGCGGCGCCGACGAGGTCCGGCA
GCTGCACGAGTCCGGCCAGCTCCGGCGCCTCCTGGAGGGCGCCGCCGGGCAGGATCCGGCCTTCGTCTGCGACGCCTGCG
GCGGGGTCCGCTTCGTCCCCTGCCCGGCCTGCGCCGGCAGCCGCAAGGTGTTCGACGAGGAGCAGGACCGCGCCCTCCGC
TGCGCCGACTGCAACGAGAACGGGCTGGTGCGCTGCGCCAACTGCTCCTCCTGATC-----------CTAACTGAATCCA
AGGGTTAGAGTTGGTAGATTCGTCGTCAGTCAGATCAGAGAGAGGCGCATTCCATTTTCGGTTTCTTGGAGTTCT-----
---TGATTTATGATTTATGTGTATCCTGAATCGATCAATCAGT----CCG-ATCGTTTGGGGATCGGATTGTTAGCTGCT
CATGGACGGAAGAAGAGAACGAATTGTTCTTGGCTCCTTTGCTGCGGCCTGCGGGGATCGCCGTCCGGTGGCGGCGATTG
ATGATGAATAAGAGCCGGTGCTTGTATATGTGTGTAAAATTTGGCACTGATATTAGCCTGATTGATTAATGTGTAACGAA
GAACTGATGTAAATACTTGAGCTTTGGGAGTGATAAATTATTTTCTAGTTCCTTGATTATCCATGGC-TTTGGTCAAATC
TCTTCATGGATGTG-TACAGTAGCAGTACAGTTCGAGACCTCATCAAGAACTGGCCCAACTGTACTAGCAGGAAGTCTTT
AAGGCCGAAA-TCA-GCTGTGATCGACTGTACTACTCAGTCAGAAGCTGTACTCAAGCTGTTCTATAGCTGTGTTCTA--
---------AATTAGAGCCACGTCTTATGTTCTTTAATTTAATTATG--TAAGGTCAGTTAGGT----ATTTAACAAGTA
TTGAGCCTGGGGTGATTAATTCTTGCA-TAGTT-----------------------------------------------
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-------------------------------------------------CTTTATCTGATCTCTTTATCTGTACTTGCTT
TGATG---ATCCATCTTATAAGTACACGGCTTGATTTCTTCATGCACAGATGG--CATTCCATGGATGCACAGTTATATT
ATACTCATCCGG--------------------------------------------------------------------
--------------------------AAACAATGTGATCGATCGTCATCCGGAAATGATCATGATCTGACTGTACTTACT
AAAAGTCCTTAATCATGTTGCATTCAAGTTGTTTTCTAAGATTGCAGCCACCTC-CTCTTTTCTTTAAGATTCGTTGAGG
TAATGTGACCATGGTGATCAATTCATCCACAAGAACTTTTGATGATCTCAAGAGAGAGA---AGAAAAGAAAAACTTATA
ACTGATGTGGCTAGAAGTCCACTGTATTTTGATCATGGTCTAGTAAA---
>chr2D_3
--TAAAATAAGTAAAATATGTTTTTTGTAGG-TATGGTAATTCACCACAATGTCAAATCTAAATGGACTATTCACGTAAT
GTAAGAGCATTTTTTT--CGGTCAATATAAGAGCGTTTTT-ACACTACTATAATGTCAAAAACGCTTTCATATTATAGGT
CGGG-AAATAGTAGCTAATTGTCCATGCTCTGTCCCTATCAAGTCCTCCAAAACGATCTGCCCCAGTCAAAACCTCCTGA
ACTGAAACGAACAGAGAGCCGTGTGCTACTTCTCCTATTTGCGCTGTCAACAGAACATGGTTCACACAAAATAGAGAAAA
AGTAAAAGTTAGGGTGAAGAAAATGACAGGCTCTCGTTGAGGGCGAGCACAAC-AAACGTTCAAGAACCTTCCTTTCCAG
TTGCAAAAAT----CACAAGT------CCATTCCCACCGGTAATAACTGCCACACCGGGACAAATACTAGCCAGCCAGAG
CTAGCCACTCAGTCTACTCACAAAGTATAGCAAGTA--------------------------------------------
--------------------------------------------------------------------------------
GCAACCACAAAAACTAATGACCAAATAAACATAAAATGCTTCCAAACTAAGCAAAGAAATGCGCAAAAATGCTTA-TTTT
GGTCATCGCCC--------GCTGGTTCCAACTGGAAACGCCCTCTGTCTCTCAATTAGTTGCTGGTTTTTCTGCAGAAAT
TAGTTGCTAAATTGGCTGTGCGTGCCATTTTTGCTCGCAAGATTTAGTTGGTGAATTCGTAGCTGAGTTGTTTTTGACAC
ACCCAGCATCAAGAA------GAGGAGGAGAACCAAAGTAAAAGCAACGAGGAAACTTCCACCGGGAGAAGAAAAGAAAA
GAGTAATATATATATACGCCACCACTAAGTAAACCCCACCTCGATCCACCTTCCGGCGAAACCAATTCATTGCTCGCTTT
CGCAAGACTCTTTCTTTCTCCCCTTTCCTCTCCCCCCAACCCGTCCGTCGTCGCCTCCGCCCGAGGTAACCG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CCATAGCCGCGAG
GAATCAAGAACCTTGCCTGCCGCACGTCGTCCCTGAGGACCGAGAG---GAGACGATGGAGGGCGGCTGCGGCGTGGCCG
GCGGGACGGAGGGCGGCGGCGGCAAGAAGCAGCAGCAGCAGGCGCGGCCGCAGTTCGGGCGGTCGCTGACGTACCACCAC
CA---------CCAGGGGCACCGGCTGCTGCCCCGGTGGCGGCGGCCGCAGC---TGGCGGACGAGCCCCGCGCGCGGCC
GCAGGCGGTGGTGCTCTACACGACGTCGCTGCGCGGGGTGCGGCGCACCTTCGCGGACTGCTCCGCGGCGCGCGCCATCC
TGCGGGGGTCCCGCGTCGCCGTCGACGAGCGCGACGTGTCCATGGACGCGGCGCTCCGCCGCGAGCTGCAGGCGCTGCTG
GCCGCGCGGGGCCGCGCCTTCTCGCTCCCGCAGCTCTTCATCGGGGGCCGGCTCGTCGGCGGCGCCGACGAGGTCCGGCA
GCTGGACGAGTCCGGCCAGCTCCGGCGCCTCCTGGAGGGCGCCGCGGGGCAGGACCCGGCCTTCGTCTGCGACGCCTGCG
GCGGGGTGCGCTTCGTCCCCTGCCCCGCCTGCGCCGGCAGCCGCAAGGTGTTCGACGAGGAGGAGGACCGCGCCCTCCGC
TGCGGCGACTGCAACGAGAACGGGCTGGTGCGCTGCGCCAACTGCTCCTCCTGATCCTTCCCCGCCGCTAATTGAATCCA
AGGGTTAGAGTTGGTAGATTCGTCGTCAGTCAGATCAGAGAGGGGCGC-----ATTTTCGGTTTCTTGGGAGTTCTTGAC
TTATGATTTATG---------TATCCTGAATCAATCA----AT----CCG-ATCGTTTGGGGATCGGATTGTTAGCTGCT
CATGGACG---GAAGAGAACGAATTGTTCTTGGCTCCTTTGCTGCGG-------GAATCGCCGCCCGGTGGTGGTGATTG
GTGATGAATAAGAGCCGGTGCTTGTATATGTGTGTAAAATCTGGCGCTGAGATTAGCCTGATTGGTTAATGTGTAACGAA
GAACTGATGTAAATACTTGAGCTCTGGGAGTGATAAATTATTTTCTAGTTCCTTGATTATCCATGGC-TTTGGTCAAATC
TCTTCATGGATGTACTACAGTAGCAACACAGTTCGATACCTCATCAAGAACTGGCCCAACTGTACTAGCAGAAAGTCTTC
AAGGCCGAAACT-A-GCTGTGATCGACTGTACTACTCAGTCAGAAGCTGTACTCATGCTGTTCTATAGCTGTGTTCTA--
---------AATTAGAGCCACCTCTTTTGTTCTTTAATC-----ATG--CAAGGTGAGTTGGGT----ATTTAACAAGTT
TTGAGCCTGGGGTGATTAATTCTTGCA-TAGTT-----------------------------------------------
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-------------------------------------------------CTTTATCTGATCTCTTTATCTTTCATTGCTT
---TGATGATCCATCTTATAAGTACACGGTTTGATTTCTTCATGCACAGATGTGTCATTCCATGGACGTACAGTTATAT-
--------------------------------------------------------------------------------
--------------ACATC----TTAAAACAATGTGATCGATCGTCATCCGGAAATGATCATGATCTGACTGTACTTACT
AAAAGTCCTTAATCATGTTGCATTCAAGTTGTTTTCCAAAATTGCAGCCACCTCCTTCTTTACTTTAAGATTCGTTGAGG
TAATGTGACCATGGTGACCAATTCATCCACAAGAACTTATGATGATCTCAAGAGAGAAA-AGAAAGAAAGAAAACTTGTG
ATTGATGTAGCTAGAAGTCCACTGTATTTTGATCATGATCTAGTAAA---
>chr4A_1076
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--------------------------------------------------------GGGCGGTCGCTGACGTACCACCAC
CCCTACCAGGGCCAGGGGCGCCGCCTGCAGCCTGC---GCAGCGCCACCAGC---TCCCTGACGTGCGTGCCCCGCGGCC
G---GCGGTGGTGCTCTACACGACGTCGCTCCGCGGCGTGCGGCGCACCTTCACCGACTGCTCCGCGGTGCGCGCCGTGC
TGCGCGGCTTCCGCGTGGCCGTGGACGAGCGCGACTTGTCCATGGACGCCGCGCTCCGGCGGGAGCTCCAGGGGCTGCTC
GCGGCGCGGGGCCGCGCCTTCTCCCTCCCTCAGCTCTTCGTCGGGGGCCGGCTCGTCGGCGGCGCCGAAGAGGCGAGGCA
GCTGCACGAGGCCGGCGAGCTGCGGCGCCTCCTCGAAGGCGCCGCGGGGCAGGACCCGGCCTTCGTTTGCGACGCCTGCG
GGGGTGTCCGCTTCGTGCCCTGCCCCGCCTGCGCTGGCTCCCGCAAGGTTTTCGTGGAGGAGGAAGGACGCACCAGCTGC
TGCGGCCTCTGCAACGAGAACGGCTTGGTACGATG---------------------------------------------
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>chr2D_1691
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----------------------------------------------GC-----ATTTTCAGTTTCTTG-GAGTTCTTGAT
TTATGATTTATG---------TATCCTAAATCAATCA----ATCAATCCG-ATTGTTTGGGGATTGGA---TTAGCTGCT
CATGGATG---GAAGAGAACGAATCGTTCTTGACTCCTTTGCCGCGGAATCGCA--------------------------
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---------------TACAGTAGCAGTATAGTTCGAGACCTCATCAAGAATTGGCCCAGCTGTACAAGCT-GAAGTCTTC
AAGGCCGAAACT-ATGCTGTGATCAACTGTACTAC----ACAGAAGCTGTAACCTTGTTATCCTTTAGCTCCATTCTA--
---------AATTATAGCCACGTCTTCTGTTCTTTAATT-----ATGTATAACGTCAGTTAGGTACGCATTTAAAAAGTC
TTGAGCCTGGG-TAATTAATTCTTGCG-TAGTT-----------------------------------------------
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-------------------------------------------------ATTTATGTAATCTCTTCATCTTTACTTGCTT
---TG---ATCCATCTTATAG----GCGGTTTGATTTCTTCATGCACAGATGG--CAT-----GGATACACAGTTATAC-
--------------------------------------------------------------------------------
--------------ATATC----TTGGAACAATTTGATCGATCGTCATCCGGAAATGATCATGATCTGACTCTACTTACT
AAAAGTCCTTACTCATGTTGTGCTTGAGTTGTTTTCTGAAATTATGGCCACATC-CTCTTTTCTTTAAGATTCATTGATG
TAATGTGACATTGGTGATCAATTCATCCTCAAGAACTTTTGATGATCTAA-------GGGAGAAAGGAAAAAAACTTCTA
ATTGATGTATGCT-------------------------------------
>chr2A_1691
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----------------------------------------------GC-----ATTTTTAGTTTCTTG-GAGTTCTTGAT
TTATGATTTATG---------TATCCTAAATCAATCA----ATCAATCCAAATTGTTTGGGGATCGGA---TTAGCTGCT
CATGGATG---GAAGAGAACGAATTGTTCTTGACTCCTTTGCCGCGGAATCGCA--------------------------
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---------------TACAGTAGCAATACAGTTCGAGACCTCATCAAGAACTGGCCCAGCTGTACAAGCTGAAAGTCTTC
AAGGCCGAAACTAA-GCTGTGATCAACTGTACTAC----ACAGTAGCTGTAACCTTGTTGCCCTCTAGCTCCATTCTA--
---------AATTAGAGCCACGTCG----------------------------------------------TAACAAGTC
TTGAGCCTGGGGTAATTAATTATTGCA-TAGTTATTTATCTGATGGTCCCTCGCGGGCGACTCGGGGGAGTCTAGGGTTT
TCCCCCGCCGCCTCCCCCACCCCCCTCGTCGTCACCGGAGACGACTGCCGGGAAAGCCCGCACGGGCGCTGGAGAAGGTG
GCGGCGGGGTCTTCGGCGCTCCTTCTTCGTGGAGGCCATCGGATCCATGGGCGGCGGCCCCTGCTGGCGTGGCGTGCGGC
GTGCCTGACGGTTCGGCCGTGAGGACGGCGAGCCGCAGGCGTGCCAGATCTGGAGGTATTGCCCCCTCCCTTCCATGCAT
CCCTTTCCAGTCCCCGGTTCGGTTTGGATCTTGCCGGATACACCTCCGATGTGTTCTGGTGGAGCAGATCGGTGTCCGAG
GGAAACCTTGGCCGCCTTGGCTGGCCGGCAGCGGCGACGCCGCCTTTTGGCGCCGCTTTCCTCCTTGGGGGCGCTGCTGA
GGGCACCATCTCTCCACTCCGACCCATGTCCGGGTGAAAGCCCAAGATCCAATGCGGATCGGGCGTCGGCAGCGGCCCGT
GCACCGTAACCTTCCTGGAGGCGGCGCCAAGGACATTGGGATCGGATGGGAGGGTCTGCAGGTGAGGGGTAGGGGTGTGC
TGCCTCCCTTTCGGTGGAGCGGTGTTTCTTTCTACATATTATTGGCGATGGCTCTTCGCGGCATGGAGCAGCGGAGGCTT
GGCGTCAGATGTGTGGCGATGGACACGCGCAGGAGGTCAATGTTGTCTGGCGTCATGGTGGCGTCGGCGGCAACGAGACT
GGGCAAGGCCGATGCAACAGTACAGCTCTGAAGATGGATATGTGGCAGGTGATTGTGGCGGCCTCATACCCGGCAGGCGT
CCTGGTTGAGGAGCACGTCGGACTGGTGGGTGCCCATACCCGGCAGGCGTCCTGGTTGGGACCTCGGGTCTTAGATGTTA
GGTTTGGCTGCGAGGTCTCTTTGGTATTAGACCCAGACCATCAGCGCCTCTTTATCAGTTAGATAGGAGTAGCGACAGAG
GTTGTTGAGACGGTGGTTTTGGTCTTACTGTTATACGACTTTGTAAGGTCTTATGTTAATAATTAATAAATTGACCGTAT
GCATCGTCTAGATGCAGAGGCCGGGGGTATCCCTCCTTTTCTAAAAAGAATTTATCTGATCTCTTCATCTTTACTTACCA
TG-------TCCATCTTATAG----ACGGTTTGATTTCTTCATGCACAGATGGA--AT-----GGTTGCACAGTTATAT-
--------------------------------------------------------------------------------
--------------ATATC----TTGGAACAATGTGATCGATCGTCATCCGGAAATGATCATGATCTGACTCTACTTACT
AAAAGTCCTTACCCATGTTGTGCTTGAGTTGTTTTCTGAAATCACGGCCACATC-CTCTTTTCTTTAAGATTCAT--ATG
TAATGTGACATTGGTGATCAATTCATCCTCAAGAACTTTTGATGATCTAA-------GGGAGAAAGGAAAAAAACGTCTA
ATTGATGTATGCT-------------------------------------
>chr2D_1721
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---------ATG---------TATCCTAAATCAATCA----ATCAATCCG-ATTGTTTGGGGATCGGA---TTAGCTGCT
CATGGATG---GAAGAGAACGAATTGTTCTTGACTTCTTTGCGGCGGAATCGCA--------------------------
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---------------TACAGTAGCAATACAGTTCGAGACCTCATCAAGAACTGGCCCAACTGTACTAGCTGAAAGTCTTC
GAGGCCGAAACTCA-GTTGTGATCAACTGTACTAC----ACAGAAGCTGTAACCTTGTTGTCCTCTAGCTCCATTCTA--
---------AATTAGATCCACGTCTTCTGTTCTTTAATT-----ATGTACTCCCTCCGTCCCGAAATACTTGTCAGAGG-
-------------AATTAATTCTTGCA-TAGTT-----------------------------------------------
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-------------------------------------------------ATTTATCTGATCTCTTCATCTTTACTTGCTG
---TG---ATCCATCTTATAG----ACGGTTTGATTTCTTCATGCACAGATGG--CAT-----GGATGCACAGTTATAT-
--------------------------------------------------------------------------------
--------------ATATC----TTGGAACAATGTGATCGATCGTCATCCGGAAATGATCATGATCTTACTCTACTTACT
AAAAGTCCTTACTCATGTTGTGCTTGAGTCATTTTCTGAAATTACGGCCACATC-CTCTTTTCTTTAAGATTCATTGATG
TAATGTGACATTGGTGATAAATTCATCCTCAAGAACTTTTGATGATCTAA-------GGGAGAAAAGGAAAAAACTTCTA
ATTGATGTATGCT-------------------------------------
>chr6A_2099
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-----------------TGTGATCAACTGTACTAC----TCAGAAGCTGTACTCATGCTATTCTGTAGCTGTGTTCTACT
CCTGGGGTGAATCAGAGCCACGTCTTCTGTTCTGTAATC-----AATGCTGGA---------GT----ATTTAACAAGTC
TTGAGCCTGGGGTGATTAATTCTTTGGCTAGTT-----------------------------------------------
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-------------------------------------------------CTTTATCTGATCTCTTTATCTTTAATTGCTT
---TGGTGATCCATCTTATAAGTACACGGTTTGATTTCTTCATGCACAGATGT--TATTCCATGGATGTACAGTTATATT
ATACTCCCTCTGTAAACTACTCCATGGAGTATAAGAGTGTTTAGATCACTATTTTAGTGATCTAAACGCTCTTATATTAG
TTTACGGAGGGAGTACATC----TTAAAACAATGTGATCGACCGTCATCCGGAAATGATCATGATCTGACTGTACTTGCT
AAAAGTCCTTGAACATGTTTTACTCGAGTGGTTTTCTAAGATTACGGCCACCCC-CTCTTGTCTTTAAGCTTCGCTGAAG
TAATGCGACCGTGGTGATCAATTCATCCACAAGAACTTTTGATGATCTCAAGACAGGGGTAGGAAAAAAATTAACTTCTG
ATTGATGTAGCTAGAAGTCCACTGTATTTTGATCATGATCTAGTAAA---
>SNPs
----------------------------------------------------------S---S-----------------
-------S--------S-SS--------------------S------S-S------S--------------------S-S
--------------------------------------------------------------------------------
----S---------------------S-S--------S------------S----S----S-------------------
--S-S----------------S-----------------------S----SSS---------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
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S---------------------------------------------------------S---S------------SS---
S--S---SSSSSSSSSSSS-----S----------------S-----S---------S--------------S-------
-----------------------------------------------S--------SS----------------------
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-----------------------S----S---------------------------------------------------
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---------------------------------------------S--SSS-----------------------------
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--------------------------------S-----------------------------------------------
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-----------------------------------------S-----------------S--------------------
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---------------------------------------------------------S-----S-------------S--
-----------------S---S----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S------------------------------------S-S-
--------------------------------------------S---------------------------S---S---
--------------------------S-----S-S----S--SS-S------S--S---------SSS----S----S--
-S-----------------------------------------------------S-----------S--S--------S
-S----------------------------------------------------------------------S-------
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-----------------------------------------------------------S------------S-------
---------------------S----------------------------------------------------------
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-------------------SSSS-------------------S-------------------------------------
---------------------------------S-------S-------------------------------------S
---------------------------------------S---------------S------------------------
------S----------------------------------S-----SSS
>forward_1409
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-----------------------------TCCCTGAGGACCGAGAAGAG-------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_2560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
AGGGCCGAAATCAGTTGTG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
