>input_sequence_73813
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----------------------------ATGGGTGAGAGAGTGAAGGGAACCGTGAAGTGGTTCAACGTCACCAAGGGGT
TCGGATTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATCAAGGCCGACGGCTACCGCAGC
CTCAACGAGAACGACGTCGTCGAGTTTGAGGTCATCACCGGCGACGACGGCCGAACCAAGGCCGCCGACGTCACCGCACC
AGGAGGGGGTGCGCTCGCCGGCGGCTCCCGCCCTGGCGACGGCGGTGGTGACCGCGGGGGTCGCGGCGGGGGTGGCTACG
GTGGAGGCGGCTACGGCGGC---------------------------GGCGGCGGCGGCGGCTACGGTGGTGGTGGCGGC
GGCTACGGCAG------------------CGGTGGCGGCAGCTACGGCGGCGGTGGCGGCTATGGA--------------
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-------------------------------------------------------------------------------G
GTGGTGG---------------CGGCGGCGGCCGCTAC------------------------------------------
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--------------GGAGGAGGC---------------GGCGGCGGCGGCCGTGAGTGC---------------------
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--------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCCAGGGAC
TGCCCCCAGGGCG---------GC---GGCGGCGGTGGCGGTGGCTACGGAGGTGGTGGCGGCCGTGGCGGTGGTGGTGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCGCGCGAGTGCCCCAACAAGACCAACTAG----------
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>chr1A_1_TraesCS1A01G262500
ACCGTTTTCACTATTGGATTCCTCGCGTCGAGATATTCAAAACTAGATCCCATGTTGATAGATTTTGACGAACTTTTTTT
-CATGAGAAAACCGGACGAAAAAAACCGAAACCGGGAGCATGGTTTTTTTTCCTTTCCGAAAGAGGCACGCCCGTGCCTC
TCGCGAAAATCACGCCCGTGCCTTTCGTGGAAGCAAAACCGAGACTCTCGTGGAAGGAAAAAAAATAG-AAGTCA---TG
TTTTTTTTC-TCGTTTCTG--AGAGGCACGGCCATGACTCTCGCGAAAGCACAACCGTACCTCTCGCGGAAACAAAACCG
TAACTCTCGCGAAAGAAAAAAAA-C----AAAAAAC-CA----TTTTTTTTCGTTTCCGAAAGGCACGGTCGTGACTCTC
GCTAAAGCATAACCGTGCCTCTCGCGAAAAAAAC-CATGACTTTCAGGAAAGAGAAAA------AAATTGT------GTT
TTTTTTCTCGTAA-------TTT-TTTTTTTA-ATTTTTTTGATCGAAAAGCTAAGGAAGAGA-----AAAACCAAAGCG
TC--GAAAAACCCTG--AAAAAAA--CCGTTTAAAAAGCCAAAAACGCGTGTGGAAAAATAAAA--AA--ATAAAATCCG
GAAAGAGTGTCCAAAATGCGACACGTGGCGAATGACTGAGAACGCTCTAAATGGCGCTGATCGTTGCGAGGCAGCTCTCG
TTAACTAGATGCTCCCGGGAGCAGGCGAGTGAACTCACGTCGCTGGGCCGCATGGAAAACCAGCAGGTCCAACTTAATTG
TGTGGTTGGGCCTCGAAGCTGCTGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGCCCTCATTCCTCAGCCA-------------CCACACCGATCTAGGGTTTCCTGCTAGGGTTTT
AGTCCTTCGTTTCCAGCGGCGGCGCAAGATGGGTGAGAGAGTGAAGGGAACCGTGAAGTGGTTCAACGTCACCAAGGGGT
TCGGATTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATCAAGGCCGACGGCTACCGCAGC
CTCAACGAGAACGACGTCGTCGAGTTTGAGGTCATCACCGGCGACGACGGCCGAACCAAGGCCGCCGACGTCACCGCACC
AGGAGGGGGTGCGCTCGCCGGCGGCTCCCGCCCTGGCGACGGCGGTGGTGACCGCGGGGGTCGCGGCGGGGGTGGCTACG
GTGGAGGCGGCTACGGCGGC---------------------------GGCGGCGGCGGCGGCTACGGTGGTGGTGGCGGC
GGCTACGGCAG------------------CGGTGGCGGCAGCTACGGCGGCGGTGGCGGCTATGGA--------------
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-------------------------------------------------------------------------------G
GTGGTGG---------------CGGCGGCGGCCGCTAC------------------------------------------
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--------------GGAGGAGGC---------------GGCGGCGGCGGCCGTGAGTGC---------------------
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--------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCCAGGGAC
TGCCCCCAGGGCG---------GC---GGCGGCGGTGGCGGTGGCTACGGAGGTGGTGGCGGCCGTGGCGGTGGTGGTGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCGCGCGAGTGCCCCAACAAGACCAACTAGACGGCTTTGC
CCGTCAGATCTGAGTGCCCCGTTCCCCTTCGCTCCTTTTCCTACCGCCTGACTCTGCAGCAAGTCATACC-TATACCTAT
CAGTATTAGTATATGTCGCCGTAGTGTT-CCCCGTGCTTCTCGTAGGAAGAAGAATCGACGATGCGAGCTTGGTTCCAGA
AGTATTGTTGGTGGCGTG-TTGTTCGTTTGAAGTTATC---TTGTGTCGTCTGATGGGGACAGACCTTA-TATCTTTATG
TATTGGATTGAATGGACTAAGTTATGCAAGTC-AAGTTATGCTGTCTGATT-TTGATATCATTGAAACTTGCATGTTCTT
TTCATTTTTCCAAAAACAAAAA-CAGCTGATCGTTTTTCAGTTCGCGCGGATTCGTTTCTCCAGTTGTTGGGTCTTCGTC
TGCATCTCAGAGCGTGCTCCTCTG--GGCGTCCAGGCTAGAATGTTCATTGTTTAG------------------------
------------TAGCATGCTTGAGTGCTA--------------------------TTGTTCAGAGATTAGTATTAGTAT
ATTTGTTCAGATATTAGAATTTTTTCATGCGTCATATTTCAGTCAGATTGTGTTCA--------------ATGCATGAAT
GAACAGCCTCACTATTTAGATGTGTGTACTGAGATCACAAGAAGTTTTGGAAGCTATGTTTTGCTTACAGTTTCTCTATG
CTTTTTGTTCCTTAGTCTGTCAGCTTGCATCATTGTTCAGTATATCGTGGTTTTCATAGATTAACT-ATCTGTCTTATTG
TACAGTCATTTCTCATTTCATTATTCTGT---TTGTTATTCACACAATGAGCTCTTGCCTGGCGATGGCTTCTTATGTCC
AGTATTTTTTTCATATAGTTTTTCTTTCATAGTCAAGCCCATTCAGCTCAGTATTTTAGCACCTCACTTTTCTTCAGTTT
TTCATTCTTCATGAGCGATAAATCACGCTGAAGGCTCTACTTGCACTTCTTTTGGTCTCTCTTTGTCTTGAAGC---TCT
TATTCAGTTTTTAGCCTTTTAATTCGGCTTCACCAGTTTCTTTGT
>chr3D_1
ACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGATAGGTTTTGACGAACTTTTTTT
TCACGAAAAAAACCGGACG-AAAAAACCAAACCGGGAGCATGG-TTTTTTCCCTTTCCGAAAGAGGCACGCCCGTGCCTC
TCGCGAAA-TCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGAAAAAAAAACAG-AAAATGCG--T
TTTGTTTTT-CCCTTTCCG--AGAGGCACGGCCGTGACTCTCACGAAAGCACAACCGTGCCTCTCGCGGAAGTAAAACCG
TGACTCTCGCGAAAGAAAAAAAAAT----AGAAAATGCG-----TTTTTTCCGTTTCCGAAAGGCACGGCCGTGACTCTC
GCTAAAGCACAACCGTGCCTCTCGCGAAAAAAAT--GTGACTTTTCACA------AAAGAAAGAAAAAAGTAAACGCGTT
CTTTCGCGC----AAAAAAAAAATTTCCAAATTTTTTTTTTTGTCGAAACGCTAAGGAAGACC-GGGGAAAAACCAAAAC
ATCGAAAAAACCCGG--AAAAAAA--CCGTTTAAAAAGCCGAAAACGCGTGTGGAAAAATAAAA--AAA-ACAAAATCTG
GAGGGAGCGTCCAGAGCGCGACACGTGGCGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGC--------
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---------------------------------------------
>chr5B_1
ACCGCTTTCACCGTTGGATTCCTCGCGTCGAGATTTTCAAAACTAGATCTAATGTTGATAGGTTTTGACAAACTTTTTTT
-CACAAAAAAAAACAAATG-AAAAAACCGAACCGTGAGCATGGGGTTTTCCCCTTTCCGAAAGAGGCACGCCCGTGCCTC
TCCCGAAA-TCACAACCGTGCCTCTCGCGGGAGCAAAACCGTGACTCTTGCGGAAGGAAAAAAATAAG-AGAAAATG---
-TGTTTTTT-CCTTTTCGA--GGAGGCACGGTCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCA
TGACTCTCATGAAAGAAAAAAAAAC----GGAAAATGTG-----TTTTTTTATTTTCCGAGAGGCACGGGCATGACTCTC
GCGAAAGTAAAACTGTGCCTCTCGTGGAAGCAAAACCATGACTCTCGCG------AAAGA-A-AAAAATGC------GGT
TTTTTGCGC----AATTTTTTTT-TGA---AA-TTTTTTTTGATCGAGAAGGTAGGGAAGACC-GGTGGAAAACCAAAAC
GTCGAAAAAATCGAG----AAAAC--CCATTAAGAAAGCTGAAAACGTGTGCGGAAAAATAAAA--AA---TAAAATCCG
GAGGGAGCGCCCAGAGCTCAACACGCGGGGAATGGCTGAGAGCGTGCCAAGTGAAGCTTATCGTTGCGAGGC--------
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---------------------------------------------
>chr4A_122
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------------------------------------------GTTGTTTTCCCTTTCCGAAAGAGGCACGCCCGTGCCTC
TCGTGAAA-GCACAACTGTGCCTCTGGCGGAAGCAAAACCGTGCCTCTCGTGAAAGAAAAAAAAACAA-AAAACGCA--T
TTTTTTTCC-TTTCTGAA---AGAGGCACGCCCGTGCCTCTTGCGAAAGCACAACCGTGCCTCTGGCGGAAGCAAAACCG
TGCCTCTTGCGAAAGAAAAAAAAAGAAAAAACACAT-TT----TCTTTTTCCGTTTCGAAGAGGCACGGCCATGCCTCTC
GCAAAAGCACAACTGTGCCTCTCGTGAAAGCAAAATCGTGACTCTCGTG------AAA-----AAAAATGC------ATT
TTTTTGCGCATAAAATTTTTTTT-TGA---AT-TTTTTTTTGGTCGAGAAGCTAGGGAAGACC-GGTAAAAAACCAAAAT
GTCAAAAAAAACCCGGCAAAAAAA--CCTTTTAAAAAGCCAAAAACGCGTGCGTAAAAATAAAATAAAA-ACAAAATACG
AAGGGAGCGTCCAAAGCACGACACGTGGCGAATGGTTGTGAGCGCGACAAGTGGCGCTGATCGTTGCGAG----------
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>chr3D_123
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-------------------------------------------TTTTTTTCCCTTTCC--GAGAGGCACGGTCGTGACTC
TCACGAAA-GCACAACCGTGTCTCTCGCGGAAGCAAAACCGTGACTCTCACGAAAGAAAATAAAATAG-AAAACGCA--T
TTTGTTTTT-CCCTTTTCG--AGAGGCACGGCCATGACTCTCGCGAAAGCACAACCATGCCTCCCGCGGAAGCAAGACCG
TGACTCTCGCGAAAGAAAAAAAA-C----AGAAAACGCA----TTTTTTTCCGTTTCTAAAAGGCACGGCCGTGACTCTC
GCTAAAGCACAACCGTGCCTCTCGCGGAAGAAAAACCGTGACTTTCACG------AAAGAAG-AAAAATGT------GTT
TTTTCGCGC----AAGATTTTTT-TTTACCGA-ATGTTTTTGATCGAAAAGCTAAGGAAGGCCAGGGGAAAACCAAAACG
TC--GAAAAAACCC----AAAAAA--CGGTTTAAAAAGCCGAAAACACGTGTGGAAAAATAAAA--AA---CAAAATACG
GCGGGAGCGTCCAGAGCGCGATATGTGGCGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGC--------
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>chr6A_123
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-------------------------------------------TTTTTTTCCCTTTCC--GAGAGGCACGACCGTGACTT
TCGCATAA-GCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCCCAT-----GAAAAAAAACAG-AAAAACGTGTT
TTGTTTTTT-CCCTTTCCG--AGAGGCACGGTCGTGACTCTCGCGAAAGCACAACCGTTCCTCTCGTGGAAGCAAAACCG
TGACTCTCGCGAAAGAAAAAAAAAT----AAAAAACACG-----TTTTTTTCGTTTCCGAAAGGCACGGCCGTGACTCTC
GCTAAAGCATAACCGTGCCTCTCGCGAAAGAAAAACCGTGACTTTCGCG------AAAGGAA-AAAAAAGAAAGCGCGTT
TTTTCGCGC----AAAATTTTCT-TTTT-CGA-ATTTTTTTTATCGAAAAGCTA-AGAAAACC-GGGGAAAAACCAAAAC
GTCAAAAAAACCCAG--AAAAAAA--CCGTTTAAAAGGCTGAAAACGCGTGCAAAAAAATTT----AAAAATAAAATCCG
AAGAGAGCGTCCAGAGCGCGACACGTGGCGAATGGCTGAGAGCGCGCCAAGTGACGCTGATCGTTGCGAGGC--------
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---------------------------------------------
>chr6D_124
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--------------------------------------------TTTTTTCCCTTTCC--GAGAGGCACGGCCGTGACTC
TCGCAAAA-GCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGAAAAAAAA-CAG-AAAACGCG--T
TTTGTTTTT-CCCTTTCCG--AGAGGCACGGCCGTGACACTCACGAAAGCACAACCGTACCTCTCGCGGAAGTAAAACCG
TGACTCTCGCGAAAGAAAAAAAA-C----AGAAAACGCG-----GTTTTTTCGTTTCCGAAAGGCACAGCCGTAACTCTC
GCTAAAGCACAACCGTGCCTCTCGCGAAAAAAAA-CGTGACTTTTCACG------AAAGAAA-AAAAAAGTAAACGCGTT
TTTTCGCGC----AAA-----TT-TTTTTTAA-TTTTTTTTGGTCGAAACGCTAAGGAAGACC-GGGGAAAACCAAAACG
TT--GAAAAAACCCG--GAAAAAA--CCGTTTAAAAAGCCGAAAACGCGTGCGGAAAAATAAAATAAAAAACAAAATCTG
GAGGGAGCGTCCAGAGCGCGACACGTAGCGAATGGCTGAGAGCGCGCAAAGTGGCGCTGATCGTTGCGAGGC--------
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>chr2B_124
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--------------------------------------------TTTTTCCCCTTTCCGAAAGAGGCACGCCCGTGCCTC
TCGCGAAA-GCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGAAAAAAAAATAC-AAAAAACA---
-CGTTTTTTTCCCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAAGCACAACCGTGCCTCTCGCAGAAGCAAAACCG
TGCCTCTCACGAAAGAAAAAAAA-C----AGAACA--CA----TTTTTTTCCGTTTCCAAGAGGCACGGCCGTGCCTCTC
GCGAAAGCACAACCGTGCCTCTCGCGGAAACAAAACCGCGACTCTCGCG------AAA------AAAATGT------GTT
TTTTTGCAT----AAAATATTTAATATTTTCG-ATTTTTTTTGTCGAAAAGCCAGAGAAGACC-GGTAGAAAACCAAAAC
GTAAAAAGAAACCAG--AAAAAAA--CTGTTTAAAAAGCCGAAAACGCATGCGAAAAAATAAAA---A----AAAATCCG
GAAGGAGTGCCCAGAGCGCGACACGTGGTAAATGGCTGAGAGCGTGCCAAGTGACGCTTATCCTTGCGAGGC--------
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>chr5A_125
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---------------------------------------------TTTTTCCCTTTCT--AAGAGCCACGGCCGTGACTC
TCGCGGAA-GCACAACCGTGCCTCTCGCGGAAGCAAAACTGTAACTCTCGCAAAAGAAAA-----CAG-AAAACGCA--T
TTTGTTTTT-CCTTTTTTG--AGAGGCACGGCCATGACTCTCGCGAAAGCACAACCATGCCTCTCACGGAAGCAAAACCA
TGACTCTCACGAAAGAAAAAAAA-C----AGAAAACGCG----TTTTTTTCCGTTTCCGTAAGGCACGGCCGTGA--CTC
GCTAAAGCACAACCGTGCCTCTCATGGAAAAAAAACCGTGACTTTCGCG------AAAGAAA-AAAAATGT------GTT
TTTTTGCGC----AAA--TTTTC-TTTTTTGA-AATTTTTTTATCGAAAAGCTAAGGAAGACC-GGGGGAAAACCAAAAC
GTCGAAAAAACCTAG--AAAAACCCG----TTAAAAAGCCGAAAACGCGTGCGGAAAAATAAAT---AAAACAAAATCCG
GAGGAAGCGTCCAGAGCGCGACACGTGGCGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGC--------
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---------------------------------------------
>chr4A_129
TT------------------------------------------------------------------------------
---------------------------------------------------CCTTTTC--GAGAGGCACGGCCGTGACTT
CCGCATAA-GCACAACCATGCCTCTCGCGGAAGCAAAACCGTGACTCTCACGAAAGAAAAAAAA-CAGAAAAACGCG--T
TTTGTTTTT-CCCTTTCCG--AGAGGCATGGCTGTGACTCTCGCGAAAGCACAATCGTGCCTCTCGCGGAAGCAAAACCG
TAACTCTCGCGAAAGAAAAAAA--C----AGAAAACGCG-----TTTTTTTCGTTTTCGAAAGGCACGGCCGTGACTCTC
GCTAAAGCATAACCGTGCCTCTCGCGGAATAAAAACCGTGACTTTCGCG------AAAGAAA-AAAA-------CGCGTT
TTTTCGCGC----AAT--TTTT---TTTTTGA-ATTTTTTTTATCAAAAAGCTAAAGAAGACC-GGGGAAAAATCAAAAC
ATCGAAAAAAT-CGA--AAAAAAA--CCGTTTAAAAGACCGAAAACGCGTGCGGAAAAATAAAA---ATAACAAAATCCG
AAAGGAGCGTCCAGAACGCGACACGTGGCGAATGGCTGAGAGCGCGCCAAATGGCGCTGATCGTTGCGAG----------
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>chr7A_131
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---------------------------------------------------CCTTTCT--GAGAGGCATGGCTGTGACTT
TCGCGAAA-GAACAACCGTGCCTCTCACGAAAGCAAAACCGTGACTCTCGACAA--AAAA-----CAG-AAAACACG--T
TTTGTTTTC-CCTTTCCA---AGAGG------CACGACTCTCACGAAAGCACAACTGTGCCTCTCGCGGAAGCAAAACCT
TGACTCTCGTGAAAGAAAATAAA-T----AGAAAA--CACGTTTTTCTTTTCGTTTCCGAAAGGCACGGTCGTGACTCTC
GCTAAAGCACAACCGTGCCTCTCGCGGGAAAAAG-CAGTGACTTTCGCA----------AAA-AAAAATGC------GTT
TTTTTGCCCCCAA-------ATT-TTTTTCCG-ATGTTTTTGATTGAAAAGCTAAGAAAGACC-GGGGGAAAACCAAAAC
ATCGGAAAACCCCGG--AAAAAAACCCCGTTTAAAAAGCCGAAAACGCATGCGGAAAAATAAAATAAAAAACAAAATCTG
GAGGGAGCGTCCAGAGCGCGACATGTGGCGAATGGCTGAGAGCGCGCCAAGTGACGCTGATCGTTGCGAGGC--------
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>chr1B_682
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----------------GGGAGCAGGCGAGTGAACTCGCGTTGCTGGGCCGAATGGAAAACCAGCAGGTCCAACTTAATTG
TGTGGTTGGGCCTCGAAGCTGCTGTACAAGCCCAACTAAACAGACTATTTATCCAGACCCCCCACCTCCT----------
--------------------------------------------------------------------------------
-----------------CCCTCAGTCCTCAGCCA-------------CCACACCGATCTAGGGTTTCCTGCTAGGGTTTT
AGTCCTTCGTTTCCGGCGGCGGCGCAAGATGGGTGAGAGACTGAAGGGTACCGTGAAGTGGTTCAACGTGACCAAGGGGT
TCGGCTTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATCAAGGCCGACGGCTACCGCAGC
CTCAACGAGAACGACGTCGTCGAGTTCGAGGTCATCACCGGCGACGACGGGCGCACCAAGGCCACCGACGTCACCGCACC
AGGAGGAGGTGCGCTCGCCGGCGGCTCCCGCCCTAGCGAAGGCGGTGGTGACCGCGGGGGTCGCGGCGGCGGTGGCTACG
GTGGAGGCGGCTAT---GGC---------------------------GGTGGCGGCGGCGGCTACGGAGGTGGCGGCGGT
GGCTACGGAGG------------------TGGCGGCGGCAGCTACGGCGGCGGTGGCGGCTACGGA--------------
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-------------------------------------------------------------------------------G
GTGGTGG---------------TGGCGGCGGCCGCTAC------------------------------------------
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--------------GGAGGAGGC---------------AGCGGTGGCGGCCGTGAGTGC---------------------
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--------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCCAGGGAC
TGCCCCCAGGGCG---------GC---GGTGGCGGTGGTGGTGGCTACGGAGGCGGTGGCGGCCGTGGCGGTGGTGGTGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCGCGCGAGTGCCCCAACAAGACCAACTAGGCGGCGCTGC
CCGTCAGATCTGAGTTCCCCGTTCCCCTTCGCTCCTTTTCCTACCGCCTGACTCTGCAGCAAGTCATACC-TATACCTAT
CAGTATTAGTATATGTCGCCGTAGTGTT-CCC-GTGCTTCTCGTAGGAAGAAGAATCGACGATGCGAGCTTGGTTCCAGA
AGTATTGTTGGTGGATTA-TTGTTCGTTCGAAGTTATCTTGTCGTGTCGTCTGATGTGGACAGACTGATCTATCTCTATG
TATTGGATGGACCG----AAGTTATGCAAGTCTAAGTTATGCTGTCTGATTATTGATCTCGATGAAACTTGCATATCATT
TTCA-TTTTCCTAAAACAAAAA-CAGTTTATTTTTTT-CATTTTGTGAAGTGTCAGGTTTCCAGTTGTTGGATCTTTGTG
TGCATCTCGGAGCGTGCTCCTCTGTGGTTGTACAGGCTTGATTGTTCATTGTTTTATGTGACTGTTTAGTGTGGTTGGAT
GGATTGTGGAAATTGCATGCTTAACTATGACTGTTCACAGATTAGTATTAGTACATTTGTTCAGAGATTAGTTTTAGTAC
ATTTGTTCAGAGATTAGT-TTTTTTCATGTGTTATATTTGTTCAGATATTAGTATTGGTATATATGTTTGATGCATGAAT
GAACAGCCCCACTATTTATATCTGTGTACTGAGGTCAAC--AAGGTTTCGTAGCTATGTTGTGCTTACAGTTTCTCTATG
CTTTCTGTTCCTTTGTCTGTCAGCTTGCATCGTTGTTCAGTATATCGGTATTTGGAGTT-----TTAATCTGTCTTACTT
ACAG---------------------------------------TCATTGAGCTCTTGCCTGGCGATGGCTTCTTATATCC
AGTAATTTTCTTT-------------------------------------------------------------------
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---------------------------------------------
>chr1D_692
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--------------------------GAGTGAACTTGCGTTGCTGGGCCGCATGGAAAACCAGCAGGTCCAACTTAATTG
TGTGGTTGGGCCTCGAAGCTGGTCTACAAGCCCAACTAAACAGACTATTTATCTAGACCCCCCCCTCCTCCCTC------
--------------------------------------------------------------------------------
-----------------------------AGTCCTCAGCCACCACCACCACACCGATCTAGGGTTTCCTGCTAGGGTTTT
AGTCCTTCGTTTCCGGCGGCGGCGCAAGATGGGTGAGAGAGTGAAGGGAACCGTGAAGTGGTTCAACGTCACCAAGGGGT
TCGGCTTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATCAAGGCCGACGGCTACCGCAGC
CTCAACGAGAACGACGTCGTCGAGTTCGAGGTCATCACCGGCGACGACGGCCGCACCAAGGCCGCCGACGTCACCGCACC
AGGAGGAGGTGCGCTCGCCGGCGGCTCCCGCCCTGGCGACGGCGGTGGTGACCGCGGGGGTCGCGGCGGGGGTGGCTACG
GTGGAGGCGGCTAC---GGC---------------------------GGCGGTGGCGGCGGCTACGGCGGCGGTGGCGGC
GGCTATGGCGG------------------CGGTGGCGGCAGCTATGGCGGCGGTGGCGGCTACGGA--------------
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-------------------------------------------------------------------------------G
GTGGTGG---------------TGGCGGCGGCCGCTAC------------------------------------------
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--------------GGCGGCGGC---------------GGCGGCGGCGGCCGTGAGTGCTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAAGTGCGGCGAGGAGGGCCACATCTCCAGGGAC
TGCCCCCAGGGCG---------GTGGTGGCGGCGG---CGGTGGCTACGGAGGTGGTGGCGGCCGTGGCGGTGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCTGGCCACTTCTCGCGCGAGTGCCCCAACAAGACCAACTAGGCGGCGCTGC
CCGTCAGATCTGAGTGCCCCGTTCCCCTTCGCTCCTTTTCCTACCGCCTGACTCTGCAGCAAGTCATACC-TATACCTAT
CAGTATTAGTATAAGTCGCCGTAGTGTTCCCC-GTGCTTCTCGTAGGAAGAAGAATCGACGATGCGAGCCTGGTTCGAGA
AGTATTGTTGGTGGCGTGTTTGTTCGTTCGAAGTTATCTTGTTGTGTCGTCTGATGGGGACAGACTGATCTATCTTTATG
TATTGGATGAAATGGACTAAGTTATGCAAGTC-AAGTTATGCTATCTGGTTATTGATCTCGATGAAACTTGCATGT---T
TTCATTTTTCCAAAAACAAAAAACAGCTGATCGTTTTTCATTTCGCTCAGATTCAATTTTCCAGCTGTTAGGTCTTTGTG
TGCATCTCAGAGCGTGCTCCTCTG--GGCGTCCAGGCTAGGATGTTCATTGTTCAG------------------------
------------TTGCATGCTTGAGTACTA--------------------------TTGTTCAGAGATTAGTATTAGTAT
ATTTGTTCAGATATTAGTTTCTTTTCATGCGTCATATTTCAGTCAGATTGTC--------------TTTGATGCATGAAT
GAACAGCCCCACTATTTAGATGTGTGTACTGAGATCACAAGAAGGTTTGGAAGCTATATTTTGCATACAGTTTCTCTATG
CTTTCTGTTCCTTGGTCTGTCAGCTTGCATCATTGTTCAGTATATTGGGGTATTCGGAGATTAGTTAATCTGTCTTATTG
TATAGTCATTTCTCATTTCATTATTCTGTTTGTTGTTATTCACTCAGTGAGCTCTTGCCTTGCGATGGCTTCTTATGTGC
AGTATTTTTC-CATATAGTTTTTCTTTTGTAGTCAAGGCCATTCATCTCAGTATTTTAGCTCCTCACTTTTCTTCAGTTT
TTCATTCTTCATGACCGATAAATCACGCCGAAGGCTCTACTTGCACTTCTTTTGGTCTCTCTTTGTCTTCAACCTCTTCT
TATTCAGTATTTTGCCTTTCAATTC--------------------
>chr1D_924
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---------------------------------------------------------------CCTCCTCCCTC------
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-----------------------------AGCAT-------------CCACACCGATCTAGGGTTTCCTGCTAGGGTTTT
GGTCCTTCGTTTT---CGGCGGCGCAAGATGGGGGAGAGGGTCAAGGGAACCGTGAAGTGGTTCAACGTCACCAAGGGGT
TCGGCTTCATCTCCCCGGACGACGGCGGCGAGGACCTTTTCGTCCACCAGTCCGCCATCAAGTCCGACGGCTACCGCAGC
CTCAACGAGAACGACGCCGTCGAGTTCGAGATAATCACCGGCGACGACGGACGCACCAAGGCCTCCGACGTCACCGCACC
AGGAGGAGGGGCGCTCTCCGGCGGCTCCCGCCCTGGCGAAGGCGGTGGTGACCGCGGGGGCCGCGGCGGCTATGGAGGCG
GCGGCGGTGGCTAC---GGCGGT------GGCGGTGGTGGCTACGGAGGCGGTGGTGGCGGCTACGGCGGCGGTGGTGGC
GGCTACGGTGGCGGTGGCTATGGAGGCGGCGGTGGCGGCGGCCGTGGGTGCTACAAGTGCG-------------------
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--------------------------------------------GCGAAGATGGCCACATCTCCAGGGACTGCCCCCAGG
GCGGCGG---------------TGGCGGCGGCGGCTAC------------------------------------------
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--------------GGCGGTGGTGGCTACGGAGGTGGTGGCGGCGGCGGCCGTGAGTGC---------------------
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--------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCCAGGGAC
TGCCCCCAGGGCG---------GC---GGCGGCGG---C---GGCTACGGAGGCGGTGGCGGCCGTGGCGGTGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCCCGCGAGTGCCCCAACAAGGCCCACTAGGCGGCACAGC
TCTTCAGATCTGAGTGCCCCGTTTACCCTTGCTCCTTTACCTACCTCCTGATTCTGCAGCAAGTCATACCCTATACCTAT
CAGTACTAGTATTAGTCGCCGTAGCGTTTCCCCCTGCTGCTCG-------------------------------------
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>chr1B_924
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---------------------------------------------------------------CCTCCTCCCTC------
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-----------------------------AGCAT-------------CCACACCGATCTAGGGTTTCCTGCTAGGGTTTT
GGTCCTTTGTTTT---CGGCGGCGCAAGATGGGGGAGAGGGTCAAGGGAACCGTGAAGTGGTTCAACGTCACCAAGGGGT
TCGGCTTCATCTCCCCGGACGACGGCGGCGAGGACCTTTTCGTCCACCAGTCCTCCATCAAGTCCGACGGCTACCGCAGC
CTCAACGAGAACGACGCCGTTGAGTTCGAGATCATCACCGGCGACGACGGACGCACCAAGGCCAACGACGTCACCGCACC
GGGAGGAGGGGCGCTCTCCGGCGGCTCCCGCCCTGTCGAAGGCGGTGGTGACCGCGGGGGCCGTGGCGGCTACGGAGGCG
GCGGCGGTGGCTAC---GGCGGC------GGCGGTGGCGGCTACGGAGGCGGTGGTGGCGGCTACGGCGGTGGCGGTGGC
GGCTACGGTGGCGGTGGCTATGGAGGCGGCGGTGGCGGCGGCCGTGGGTGCTACAAGTGTG-------------------
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--------------------------------------------GCGAGGAGGGCCACATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGAGGAGGCGGCGGC---------------GGCGGCGGCGGCCGTGAGTGC---------------------
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--------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCCAGGGAC
TGCCCCCAGGGCG---------GC---GGCGGCGG---CGGTGGCTACGGAGGCGGTGGCGGCCGTGGTGGTGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCTGGCCACTTCTCCCGCGAGTGCCCCAACAAGGCCCACTAGGCGGCGCAGC
TCGTCAGATCTGAGTGCCCCGTTTCCTTTCGCTCCTTTACCTACCTCTTGATTCTGCAGCAAGTCATACCCTATACCTAT
CAGTACTAGTATTAGTCGCCGTAGCGTTTCCCCCTGCTGCTCG-------------------------------------
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>chr1A_930
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--------------------------------------------------------------------TCCTTC------
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-----------------------------AGCCT-------------CCACACCGATCTAGGGTTTCCTGCTAGGGTTTT
GGTCCTTCGGTTT---CGGCGGCGCAAGATGGGGGAGAGGGTCAAGGGAACCGTGAAGTGGTTCAACGTCACCAAGGGGT
TCGGCTTCATCTCCCCGGAGGACGGCAGCGAGGACCTCTTCGTCCACCAGTCCGCCATCAAGTCCGACGGCTACCGCAGC
CTCAACGAGAACGACACCGTCGAGTTCGAGGTCATCACCGGCGACGACGGTCGCACCAAGGCCTCCGACGTCACCGCACC
AGGAGGAGGAGCGCTCTCCGGCGGCTCCCGCCCTGGCGATGGCGGTGGTGACCGTGGGGGCCGCGGCGGCTACGG-----
-TGGCGGTGGCTAC---GGCGGTGGCGGTGGCGGTGGCGGCTACGGAGGCGGTGGTGGCGGTTACGGCGGTGGCGGTGGC
GGCTACGGTGG------------------TGGCGGCGGCGGCCGTGGATGCTACAAGTGCGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCGAGGAGGGCCACATCTCCAGGGACTGCCCCCAGG
GCGGCGGCGGTGGCGGCGGATACGGCGGTGGTGGCTAT------------------------------------------
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--------------GGAGGAGGC---------------GGCGGCGGCGGCCGCGAGTGC---------------------
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--------------------------------------------TACAAGTGCGGCGAGGAGGGCCACATCTCCAGGGAC
TGCCCCCAGGGCGGTGGTGGTGGC---GGCGGCGG---CGGCGGCTACGGAGGCGGTGGTGGCCGTGGCGGCGGCGGCGG
CGGTGGCGGCTGCTTCTCCTGCGGCGAGTCCGGCCACTTCTCCCGCGAGTGCCCCAACAAGGCCCACTAGGCGGCACAGC
TCTTCAGATCTGAGTGCCCCGTTTACCCTCGCTCCTTTACCTACCTCCTGATTCTGCAGCAAGTCATACCCTATACCTAT
CAGTACTAGTATTAGTCGCCGTAGCGTTTCCCCCTGCTGCTCG-------------------------------------
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---------------------------------------------
>SNPs
-----------S----------------------S--------------------------S------------------
---S--S----S-S--SSSS-----S-S----------------------S-----------------------------
--------S----SS--------S---S-------------S-----------------------------SS------S
------------S----------------------------------------------------------S--------
--------------------------------------------------------------------------------
---------------------------------S----------SS-S-SSSSSS------------S------------
-----S-S-S--------------------S------------------------------SS--------------S--
-------------S------------------------------------------------------------------
----------------S-----------------S------S---S-S------------------------SSSSSSSS
SSSSSSSSSSSSSSSS--------------------S---S---------------------------------------
------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS------S--------------------------------------------------------
--------------S-----------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------S--------------------------S--------------------------
------S-------------------------------------------------------------------------
--------------SSS--------------------------------------------------S------------
---------S----------------------------------------------------S-----------------
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----------------------------------------------------------------------S----SS---
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----------------------------S------------------------------------SSSS-----------
--------S------------------------------------------------S--SS--------------SS--
----------------------------------------S-------S-----SS--S-----------------S--S
--------------------------------------------------------------------------------
-------------S------------S-----------------------------------------------------
-----------------SS----------------------------------SSS------------------------
--------S-----------------------------------S-----------------------------------
----S--------S---------------------------------S--------S------SS---------------
--S----------------------------------------S--S---------------------------------
---------S-----------------SS--------S-------S--------------S-------------------
--------------S-------------S----------------------------------------S--S-------
--------S---S------S-----SSSSSSSSSSSSSSSSSSSS
>forward_682
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----------------------ACGTGGCGAATGACTGAGAA--------------------------------------
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>reverse_2877
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----------------------------------------------------------------------------TTGC
CCGTCAGATCTGAGTG----------------------------------------------------------------
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---------------------------------------------
