>input_sequence_73798
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CAGCGA
CATCG--TCGTCTTCTCTTGA----CGTGGGCAAGTTTTCGATC----TCAGCTTTCGGGACCTGATGGAGAGCAAGGAG
GCTCCGGTGGCGGCGGCGGCGGCAGCGGTGCCGGAGAAGGAGT-------------------------------------
--------CGACGTCGTGCTTCAAGAGCACGGTGGGGGAGGACGCGTCGCTCCTGGAGAAGGCCAAGGACCAGTACAAGC
AGTTCACGGGGGCGCAGGCGGGCGAGCACTGGGAGTGCCTCAAGAACAAGGTCAGCTCCATGTTCGCCGACCCCATCCCC
TTCTTTGGCGGAGGCGCCAAGGACCACGGCTCCAC------CAACAACACGCCGCCGTCCGTCGAGTCACACTAAATCGT
CGTCGTCGTCGTCGTCTAGATGGCCTAT------------CGTTACTACTACTATACTACTACTACTCTATGAGGATCAC
TAGTTGGTTGGGTCTTATTTTTAGTTCTGGTTA-AAACCTGTATCGTCGTCATTATGTTCAAGTC-TGGATTAAACTTGA
GGAACTGTATATTGTGGATTTTTGACTTAATTGAATTAGTC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AAGTGATTATGTCGAACAAGAGCTCTTTTTTTCGTAAA-------
-----------------------------------------------------TT-----TTTTTCACTTTGTATTCCCT
T--------------------CTCGATTCAAATAAAGTTACAGAT-TGTTT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr4B_1_TraesCS4B01G317500
CTGGCGCGTCCTGAGCGTCGTGTACTCGCCGGCCGCGCGGGCCTTGCTCGTAGTGTACTCGCCGGCCGCGAGGGCCTTGA
GCGTCGTGTACTCCCCGGCCGCGCGGGCCTTGGTCGTCGTGTACTCGCCGGCGGCGCGGGCCTTGCTCGCAGTGTACTCG
CCGGCCGCGAGGGCCTTGCTCGTAGTGTACTCGCCGGCGGCGCGGGCCTTGAGCGTCGTGTACTCACCGGCCGCGTGGGC
CTTGCTCGTCGTGTACTCGCCGGCAGCGCGGGCCTGGCTCTTGAGGCTGGCCCAGTAGCGCTCCACCGCCGCCGACGCCG
CGCCCGTGATGCCCTCCGTCGCCCATGACCCCGCCGTGGCCGGCGCCGGAGCAGCCTCCTGCTTGTGGGCCAGCGCCTTG
AGCATGGCCTCCTCCTCGGCCCCCATGGGCGTCGCCGCCTTCAGCATTGCCTCCGCCGCTCCCTTGGTGTCCATCGCACT
C-GAACGCCGGCCGGGCTTGGTAGAGAGATCAAAGTGGCCAAAAAAAAAGGATGCTAGGGAATCGACCGAGAAGAGATGT
GGATATGGCTGCT--------------GCGGCGAGCTGGAGTTATAAAGGAGCAGGGGCGTTTTCTTGTC-GAGGAGAAA
GCTCGCGGCTTGGAGCAGGGGACAAGGAAGAAGCGGAGAGGACGAGCAGCTCCC-TTTCCGTTTGCACTTGGGATA-AGA
TAATCTTCATCCG---ATCAGAAAAGAAAAGAGTTCGTTTTTACTACTTCTGATCCGAACTCCAAAGTGTTACTTCCTCG
TGTGGTCAATTTGTGTTCTTATCCAATTACTATTATCCAAGAGGAGGTTCACAACGGGACGCTCTCTTTCTCTTTCTTTC
CAAGTTCTTTCCTTTCCCCTACTCCAAGTCCAAGTCCAAGTCCGCGACGGCCCCGGCTTCCTCCACAAGACA---CGG--
CCTCCCCTGCATATAAGTAGGCACGACCCC-GCGACCCCCTGCCC-ACCAAAGCAA------CACAACCGCATCCAGCGA
CATCG--TCGTCTTCTCTTGA----CGTGGGCAAGTTTTCGATC----TCAGCTTTCGGGACCTGATGGAGAGCAAGGAG
GCTCCGGTGGCGGCGGCGGCGGCAGCGGTGCCGGAGAAGGAGT-------------------------------------
--------CGACGTCGTGCTTCAAGAGCACGGTGGGGGAGGACGCGTCGCTCCTGGAGAAGGCCAAGGACCAGTACAAGC
AGTTCACGGGGGCGCAGGCGGGCGAGCACTGGGAGTGCCTCAAGAACAAGGTCAGCTCCATGTTCGCCGACCCCATCCCC
TTCTTTGGCGGAGGCGCCAAGGACCACGGCTCCAC------CAACAACACGCCGCCGTCCGTCGAGTCACACTAAATCGT
CGTCGTCGTCGTCGTCTAGATGGCCTAT------------CGTTACTACTACTATACTACTACTACTCTATGAGGATCAC
TAGTTGGTTGGGTCTTATTTTTAGTTCTGGTTA-AAACCTGTATCGTCGTCATTATGTTCAAGTC-TGGATTAAACTTGA
GGAACTGTATATTGTGGATTTTTGACTTAATTGAATTAGTC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AAGTGATTATGTCGAACAAGAGCTCTTTTTTTCGTAAA-------
-----------------------------------------------------TT-----TTTTTCACTTTGTATTCCCT
T--------------------CTCGATTCAAATAAAGTTACAGAT-TGTTTTTAGAGCGTCTGGATCCTTATGAATTCCT
AAGATGTGCACTTTATC----------------------------------------------------------TATCA
AAC--ATATTTCGCTGGTTTTCTAATCCTAACGC---CATAGGGTTAAACAGGACGTATGTCTCTCCAATTCTATG----
-----TGTTTTAGTCCT-AAGGCAAAGCAGTAAAGAATCCAACGCCTCG-ACTGTTCAACGAGTGTACAAATCAACGT--
----------------------TTGTTTCCCAGAAAAAAATGGTAGACCTGCAATTGCAAGGTCCCCAACAATGC-----
--------ACAAAACCAAATACCAAACCACTCGCATGATGTGAAGATCCTATCGCTAATAATTTCAACAACCTCAGGAGA
CCAAAAAAAAAGGT-AGCAAACGAACGAACCAGATGATCTCG--TCATCATTGCATTATAATAAACTTGAGCATATATTA
GTTTAGATACATCACTCAACTGAGGGAGATTTCGGCATCATCG-AATTGAT-AAACTTTATCAAGGGATTACATACATGA
CTGGACT-GACCGAGAAAAAGAATGAAGGGCCATCTGGCC-----------------TTTTACCCCCCAATCTATCTCTA
CTTCCTAGACTACACTTGGCACATTGTTAACGAAGGGGATTAACACTAGCCGC---------CGGGCGGTTAATTAAATA
CGTGAGCTGCTAGCCTGCTAC-------GAAGGACGAACGTACCTCAACACACAAAGCAGCACCAGCCA---GAGGAGCC
TTTGCCCCCCTACAGCGCTGCGACGACCA----------------------------------ATCAGTAGTGATTGAAC
TTCCTCCTGTGCCGACTGTAGTCTGAGACGTACCTGAACGTCTGCCCGCAGCCTTCAACCAAGCACTCGTACGGGCGCTC
TCCCGTGTGGACTCTTATGTGCTCGGTCTGCGCCCACAGCCACTTGAAGGTCATCCCGCAGCCCTCCCAGGGGCACTTGA
ACGGCCTCTCGTCCCGGTGGACGCACTGGTGCCGCTTCAGGTACTTGTGCGACTGGAAGCGCTTGCCGCACGACTCGTCG
GTGCAGATGTTGCGCTCGTGGGCGCGGAGGTCCGCTCT
>chr4D_1
CTGGCGGGTCCTGAGCGTCGTGTACTCGCCGGCCGCGCGGGCCTTGCTCGTCATGTACTCGCCGGCCGCGCGGGCCCTGA
GCGTCGTGTACT------------------------------------------------------------------CG
CCGGCCGCGAGGGCCTTGCTCGTAGTGTACTCGCCGGCAGCGCT------------------------------------
------------------------------GGCCTGGCTCTTGAGGCTGGCCCAGTAGCGCTCCACCGCCGCCGACGCCG
CGCCCGTGATGCCCCCCGTCGTCCATGGCCCCGCCGGGCCCGGCGCCGGAGCAGCCTCCTGCTTGTGCGCCAGCGCCTTG
AGCATGGCCTCCTCCTCCGCCCCCATGGGCGCCGCCGCCTTCAGCATTGCCTCCGCCGCTCCTTTGGTGTCCATGGCACT
CAGAACGCCGGCCGGGCTTGCTAGAGAGATCAAAGA---------------ATGCTAGGGAATCGATCGAGAAGAGGTGC
GGATATTGCTGCTGCGGCTATGGGGTGGCGGCGAGCTGGAGTTATAAAGGAGCAGGGGCGTTTTATTGCTTGAGAAGAAA
GCGCGCGGCTTGGAGCAGGGGACAAGGAAGAAGCGGGGAGGACGAGCAGCTCCCGTTCCCGTTTGCACTTGAGATTGAGA
TTATCTTCATTCGATCATCAGAAAAGAAAAGAGTTCGTTTCTAAGTGG----------------------TACTTCCTCG
TGTGGTTAATTTGTGTTCTTATCCAATTATTATCCAAGAAGAAGAGGTTAACAACGGGACGCTCTCTTTCTCTTTCT---
------------TTTCCCCTACTCCAAGTCCAAGTCCAAGTCCGCAACGGCCCCGGCTTCCTCCTCAAGACAAGACCTCC
CCTCCCCTGCATATAAGTAGGCACGACCGC-GCACAACCCTGGCC-ACCAAAGCAA------CACAAGCAGAACCAGCGA
CATCG--TCGTCTTCTCTTGA----CGTAGA-AAGTTTTCGATC----TCGGCTTTCGGGACCTGATGGAGAACAAGGAG
GCTCCGGCGGCGGCGGCGGCCGCAG---TGCCGGAGAAGGAGT-------------------------------------
--------CGACGTCGTGCTTCAAGAGCACGGTGGGGGAGGACGCGTCGCTCTTGGAGAAGGCCAAGGACCAGTACAAGC
AGTTCACGGGGGCGCTGGCGGGCGAGCACTGGGAGTGCCTCAAGAACAAGGTCACCTCCATGTTCCCCGACCCCATCCCC
TTCTTCGGCGGAGGCGCCAAGGACCACGGCTCCACCAA---CAACAACACGCCGCCGCCCGTCGAGTCGCACTAGATCAT
C---ATCGTCGTCGTCTAGATGGCCTATATAT--------CGTTACTACTACTA--CTACTACTACTCTATGAGGATCAT
TGGTTGGTTCGGTCTTGTTTTTAGTTCTGGTTA-AAACTTGTATCGTCGTCATTATGTTCAAGT-----------CTTGA
GGAACTGTATATTGTGGATTTTTGAGTTAATTAATTTAGTC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AAGTGATTATGTCGAACAAGAGCTC--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATGAATTCCT
AAGATGTGCACTTTATC----------------------------------------------------------TGTCA
AATCTAG--TTCGCTGGTTTTCTAATCCTAATGC---CATAGGGTTAAACAGGACGTATTTCACTCCAATGCTATG----
-----TATTTTAGTCCTAAAGGCAAAGCAGTAAAGAATCCAACGCCTCGGACTGTTTAACG-----------------TG
TAATCACGTCTAGCGTGTGCCGTTGTTTCCCAGAAAATT-TGGTAGGCCTGCAATTGCAAGGTCCCCAACAATGCTGCTT
CACACACCACAAAACCAAATACCAAACCACTCGCATGATGTGAAGATCCTATCGCTAATAATTTTGACAACTTCAGGAGA
GGAAAAAAAAAAGGCAGCAAACGAACGAACCAGATGATCTCG--TCATCATTGCATT--AATAAACTTGAGCATAGATTA
GTTTAGATACATCACTCAACTGAGGGAGATTTCGGCATCATCG-AATTGATAAAACTTTATAAAGGGATTACATACATGA
CTGGACTTGACGGAGAAAAAGAATGAAGGGCCATCTGGCC-----------------TTTTACCCCCCAATCTATCTCTA
CTTCCTAGACTACACTTGGCACATTGTTAACGAACGGGATTAACACTAGCCGC---------CGGTCGGTTAATTAAATA
CGTGAGCTGCTAGCCTGCTACAACAAACGAAGGACGAACGTACCTCAACACACAAAGCAGCACCAGCCAGAGGAGGAGCC
TTTGCCCCCCTACAGCGCTGCGACGACCA---------------------------------AATCAGTAGTGATTGAAC
TTCCTCCTGTGCCGACTGTAGTCCGAGACGTACCTGAACGTCTGCCCGCAGTCTACAACCGAGCACTCGTACGGGCGCTC
TCCCGTGTGGACTCTTATGTGCTCGGTCTGGGCCCACAGCCACTTGAAGGTCATCCCGCAGCCCTCCCAGGGGCACTTGA
ACGGCCTCTCGTCCCGGTGGACGCACTGGTGCCGCTTCAGGTACTTGTGCGACTGGAAGCGCTTGCCGCATGACTCGTCG
GTGCAGATGTTGCGCTCGTGGGCGCGGAGGTCCGCT--
>chr2B_894
GAGCATAAATTAGTTTAGATACATCACTCAACTGAGGAAGATTTCCGCATCATCGCATCGATAAGCTTTATCAAGGTGAT
TACATACACCACTGAACTCACGGGC-AAAAAGAATGAAGGGCCATCTGGCACATTGTTAAATACTCCCTCTGTTTCTAAA
TATAAATCTTTTTAAAAATTTCAATATGGACTACATACAGCACAAAATAAGTAAATATACACTATAAAATACTATGTCTA
TCTACATCTGTATGTACTGTAGTTCATATCAAAATCTCTATAAAAAGACTTATATTTAGAAACGGAATATTAACGAAAGG
GATTGAAACAAGGAAGGAACAGGGAGA---------TTCCCGTTCCCGTTTGCACTTGGGAAATCATCATCTCATCGGAG
AAGAAAAGAGTCCGTTTTTACTTGTGATCCAGTCCAAAGCTAAGAATCCGTGTATACCT-GTTTTCTTCTATGATGATGA
T------CCGGACTCAG----TAGTTTCTGTGTTCTTATCCAATTATTATCATATTTCTCTCTTTGTTTCTTTCTGTTCC
CCT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------AATCCAAGCCCGCGACGGACCCGGCTTCCTCCTCTAGACAGCCCGA--
CCTCCCCTGCATATAAGTAGCCACGTCCCT-GCAGCTCCATGGCCAACCAAAGCAA------CGCAACCACAACCGGCGA
CATCG--TCTTCTTCTCTTGGGTCTTGGCG------------------TCAGCTTTTTGGACCTGATGGAGAACAAGGGG
GCAGCA---------GCGGCGC---------------------------------CGGAGAAGGAGGCGCAAGCGCAAGC
GCCGGCGTCGTCGACGTGCTTCAAGTGGACTGTGGGGGAGGGCGCGACGCTCATGGAGCGGGCCAAGGACCAGTACAAGC
AGTTCACGGAGGCGCAGGCGAGCGAGCACTGGGAGTGCATCAAGAACAAGGTCAGCTCCATATTCGCCGAGCCCATCCCC
TTCTTCGGCGGGGGCGCCAAGGACCACGGCTCCAGCAGCAGCAACAGCACGCCGCCGCCCGTCGAGTCGCAGTAGATCAT
CGCCATCGTCGTCGTCTAGATGGCCTATATAT--------CGTTTCTACTATATGTTTCTAGA-----------------
-----------------------------------------TATCGTTGTCGCCAAGTTCAGGTCTTGGATTACGCTCGA
GGAACTGTATATTGAGGATTTTTGAGTTGATTAAATTAGTG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CACTGATTATCTCGAAGACGAGCTTTTTTCCTTTTTTC-------
---TTTTCCTGTCCCCTTATTCTGAGGCTCGACCCATAGCAATTTCGTATGATTT-----TTTTTCACTTGAATATGATT
CTTGTTCACTTCTTCATAGGGCTCGGTTCGAAGAAATTTACAGAT-TTTTT-TAGAGGATCTGGATCC--ATGAATTCCT
AGGTTTTGCACTTTATTTCAAAAGAGAATTGCCATCCACCCAAATCTCTTTACAAATCAAACTGTTTTCCTGTGCTGTCA
AATCTAAATTTCTGTGGTTTTGTAATCCTAGTGATATCATAGGGTTAAAGAGGACATATGTCATTCCAATGTTAATTGTT
TTTCTTATTCGAGTCCTGAAAAAACCATATACTA------------------------------GTATAAATCATTGTTG
TCATCATCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CATT--GATAA----------------
--------------------------------------------------T-AAACTTTATCAAGAGAATACATACA---
------TTGACAGAGAAAAAGAATGAAGGGCCATCTGCACCTTGATTGACGCAAAGGTTTAGCCCCCCAAACTATCTCTA
CTTCCTAGACTAAACTCGGCACATTGTTAACCAAGGGAATTAACACTAGGACTACCAGCCATCGGGCGGTTAATTAAATA
CGTGAGCTGCTAGCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr5B_894
GGCAC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------AT-----------------------------------
-------------------------------------------------------------------TGTTAACGAAGGG
GATTAACA-AAGGAGGGAACAGGGAG-AAGGAGTAGTTCCCGTTCCCGTTTGCACTTGTG--------------------
------------------------------------------AGAATCCGTGTTTACTTAGTTTTCTTCCATGATGATGA
T------CCGGACTCAC----TAGTTTCTCGTGTGGCCAACTCGTGTTCTCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AACTCCAAGCCCGTGACGGACCCGGCTTCCTCCTCAAGACGCCCCGA--
CCTCCCCTGC--ATAAGTAGCCACGCCCCCGGCAGCCCCATGGCC-ACCAAAGCAACACGACCACAACCACAACCGGCGG
CATCG--TCTTGTTCCTC---TCGACGCAGACAAGTTTTCAACCTCAG-----TTTTCGGGCTTGATGGAGAACAAGGGG
GCAGCAGCGGGAGCGGCGGCGC---------------------------------CGGAGAAGGAGCCGCAGGCGC----
-----CGGCGTCAACGTGCTTCAAGTGGACGGTGGGGGAGGGGGCGTCGCTGATGGAGCGGGCCAAGGACCAGTACAGGC
AGTTCACGGAGGCGCAGGCGAGCGAGCACTGGGAGTGCATCAAGAACAAGGTCAGCTCCATGTTCGCCGAGCCGA-----
-TCTTCGGCGGAGGCGCCAAGGACCGCGGCTTAAC------CACCAACGCGACGCCGGCCGTCGAGTCGCAGTAGATCAT
C---ACCGTCGTCTTCTAGATGGCCTATATGT--------CGTTTCTACTACTACACTA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr5A_894
AGGGA----------------------------------GATTTCGGCATCATTGCATCGATAAGCTTTATCAAGGTGAT
TACATACATCACTGAACTGACTGGAGAAAAAGAATAAAGGGCCATCTGGCCTTTTACCCCCCAAATCTATCTCTACTTCC
--------------------------TAGACTACACTTGGCACAT-----------------------------------
-------------------------------------------------------------------TATTAAAGAAGGG
GATTAG--------GGGAACAGGGAG-AAGGAGTAGTTCCCGTTCCCGTTTGCACTTGTG--------------------
------------------------------------------AGAATCCGTGTTTACTT-GTTTTCTTCCATGATGATGA
T------CCGGACTCAGTACGTAGTTTCTCGTGTGGCCAACTTGTGTTCT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AACTCCAAGCCCGTGACGGACCCGGCTTCCTCCTCAAGACGCCCCGA--
CACCCCCTGC--ATAAGTAGCCACGCCCCC-GCAGCCCCATGGCC-ACCAAAGCAACACAACCACAACCACAACCGGCGA
CATCG--TCTTATTCTCTCGATCGACGTAGACAAGTTTTCAATCTCAG-----TTTTCGGGCTTGATGGAGAACCAGGGA
GCAGCAGCGGGAGCGGCGGCGC---------------------------------CGG----------------------
--------CGTCGACGTGCTTCAAGCGGACGGTGGGGGAGGGGGCGTCGCTGATGGAGCGGGCCAAGGACCAGTACAGGC
AGTTCACGGAGGCGCAGGCGAGCGAGCACTGGGAGTGCATCAAGAACAAGGTCAGCTCCATGTTCGCCGAGCCAA-----
-TCTTCGGCGGAGGCGCCAAGGACCACGGCTCAGC------CGCCAACACGACGCCGTCCGTCGAGTCGCAGTAGATCAT
C---ACCGTCTTCTTCTATATGGCCTAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr2D_897
TACG----------------------------------------------------------------------------
-----------------------------------------------------------------------------TCC
--------------------------TAGACTGCACTTGGCACAT-----------------------------------
-------------------------------------------------------------------TGTTAACGAAGGG
GATTAAAACAAGGAAGGAACAGGGAGAAAGGAATAGTTCCCGTTCCCGTTTGCACCTGGGAAATCATCATCTCATCGGAG
AAGAAAAGAGTCCGTTTTCACTTGTGATCCAGTCCGACCC--AGAATCCGCGTCTACTT-GTTTTCTTCCATGATGATGA
TGATGATCCGGACTCGG----TAGTTT--------------------------------------------------TCC
TCT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------ACTCGAAGCCCGCGACGGACCCGGCTTCCTCCT-AAGGCACCCCGA--
CCTCCCATGCATATAAGTAGCCACGTCCCC-GCAGCCCCATGGCC-ACCAAAGCAACACGT--ACGACAACAACCGGCGA
CATCG--TCTTC------------ACGTAGACAAGTTTTCAATCTCGATCAGCTTTTCGAGCTTGATGGAGAACCAGGGG
GCAGCAGCGGGAGCGGCGGC---------GCGGGAGAAGGAGGCGCAGG------CGC----------------------
--------CGGCGCCGTGCTTCAAGTGGACGGTGGGGGAGGGCGCGTCGCTCATGGAGCGGGCCAAGGACCAGTACAGGC
AGTTCACGGAGGCGCAGGCCAGCGAGCACTGGGAGTGCCTCAAGAACAAGGTCAGCTCCATGTTCGCCGACCCAA-----
-TCTTCGGCGGAGGCGCCAAGGACCACGGCTCCAG------CACCAACACGCCGCCGTCCGTCGAGTCGCAGTAGATCAT
C---ATCACC----------------------------------------------------------------------
------------------------------------------ATCGTCGTC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr4A_905
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GACGGACCCTTCTTCCTCCTCAAGATAGGCCGA--
CCTCCCCTGCATATAAGTAGCCACGCCCCC----------TGGCC-ACCAAACCAACGCAACCGCAACCATCAACGTCGT
CTTCTTCTCTTC------------ACGTAGACAAGTTTTCAATCTCACT----TTTTCGGGCTTGATGGAGGACAAGGGG
ACAGCAGCTGCAGCGGCGCC---------TTCGGAGAAGGAGGCGCAGGCGGTGGCGG----------------------
--------CGACGTCGTGCTTCAAGAGGACGGTGGGCGAGGACGCGTCGCTGTTGGAGCTGGCCAAGGACCAGTACCGGC
AGTTCGCGGAGGCGCAGGGTCGGGACCACTGGGAGTGCATCAAGAACAAGGTCAGCTCCATGTTCGCCGACCCCA-----
-TCCTCGGCGGAGGCGCCAAGGACCACGGCTCA---------ACCAACACGACGCCGCCCGTCGAGTCGCAGTAGATCAT
CGCCATCGCCGTCGTCTAGATGGCCTATATATATATATATCGTTATCACTACTC----------ACTCCATGAGGATCGT
TAGTTGGTTGGGTCTTTTTACTTCTGGATTAATTAAACTTGTATCGTCGTCATTATGTATA-------------------
--------ATATTTGTGGATTTTGAGTTAATTAAACTACTACCTCTCTCTCAGTTTACAGGGCGTGCGTGTGCCCCTAGG
TCGTTAATTTGACCAACTTAATACAAGTCATATATTACAAAAAAATATACCAATATAAACTTCAGATGCTCTATTTTCAA
ACCGTATAATTTTTGTGCTAATTTTTGTGCTATGTAGTTTATATTAAGGTGATAAAATTGGCAACCTAGGTATACGCGTA
GGACTTATATTAAGGTGATAAAACGGAAGTAGTCAAAGTGATAACCTGGAACAAGAGCTCTTTTTTATTCTCTCAATCAA
TGTTATTCTTGCTCCCTTGTTTTGATATACTCTATCTGTAGCAATTCCCTGGTATGGCTGTTGTTTACTTTGTGTTCCCT
A-------------------GCTCAATTCGAATAAAATTACCGGGGTTTTT-TAGAGGACCTGGATCCTTATGAGTCCCT
AAGATCTGCACTTTATA----------------------------------------------------------AGTCA
CTTAGTCATA----------------------------------------------------------------------
----------------T-AAGGCAAAGCAGCAAAGAATCCAACGCCTCAGACTGTTTAACGAGTGTAAAAATCAATGCTG
TAATCACGTGTAGCGTGTGCCCCAGAAAGAATCA--------GTAGGTCTGCAATTGCAAGGTTCCCAACAATGCTGCTT
CGCCTACCACAAAACCAAATCCCAAACCACTCGCATGATGTCAAGATCCTATTGCTAATAATTC-GACAACCTCAGGAGA
A-----------------AAACGAACGAACCAGACGATCTGTCATCGTCATTGCATT--GATAAACTTTAGCATAGATTA
GTTTAGATACATGACTCAACTGAGGGAGATTTCGGCATCATCGCAATTGATAAAACTTTATCAAGGGATTACATACATGA
CTGGAC-TGACGGAGAAAAAGAATGAAGGGCCATCTGGCC-----------------TTTTACCCCCCAATCTATCTCTA
CATCCTAGACTACACTTGGCACATTGTTAACGAAGGGGATTAACACTAGGACTACCAGCCATCGGGCGGTTAATTAAATA
CGTGAGCTGCTAGCCTGCTACAACAAACAAAGGACCAACGTACCTCAACACACAATGCAGCACCAGCCGGAGGAGGAGCC
TTTGCCCCCCAGCACCGCTGCGACGTCCAATCAGTAATGATTAAACTTCCTCTGCGACGTCCAATCAGTAATGATTAAAC
TTCCTCCGGTGCCGACTGTAGTCCGAGACGTATCTAAACGTCTGCCCGCAGTCAGGGACTGAGCACTCGTACGGGCGCTC
CCCCGTGTGGACTCTTATGTGTTCTGTCTGCGCCCACAGCCACTTGAAGGTCATCCCGCAGCCGTCCCAGGGGCACTTGA
AGGGCCTCTCGTCGCGGTGGACACACTGGTGGCGCTTCAGGTACTTGTGCGACTGGAAGCGCTTGCCGCACGACTCGTCG
GTGCAGATGTTGCGCTCGTGGGCGCGGAGCTCGGCTCT
>SNPs
------S---------------------------------------------S-----------------S---------
------------SSSSSS-SSS-SS-SSSSS-SSS-SS-S-SSS--SSSSS-SSS--SSS--SSS-S-S-S--S-SS---
-------------------------------------------SSSSSSS-SSSS-SSSSSSSSS-SSSSS-SSSSSSSS
SS-S-SSS-SSSSSSSSS-SS-SSSSSSSS--------------------------------------------------
--------------S------S----------------S----------------------------S------------
-----------------S-------------S------------------------------S-----------S-----
------------------------------------SSS-S--SS-SS-SS---------------S---------S--S
------S---------------------------------------------------------S---SS----S-----
--S---------------------------------S--------------------S-------------S---S----
-S--------S-----------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSS----------
------S----------------------S---SSSSS----S------S---------------------------SSS
SSSSSSSSSSSS----------------------------------------------------S------------S--
---------------------------------SS-------S--------------------------S--S-------
----------------------------S-S-----------------------------------------S-------
-------S-----------------SSS----------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------S-----S---S-
--S-S-------------------------------------------------S------------------------S
----------------S---------------------S----------------------------------SS-----
-------------------------S------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------SS-SSS-------
-------------------------------------------------------------------------S------
S----------------------------S------S----------S---S-----SS---------------------
----------------------------------------------------------------------------S---
--S---S------------------------S------------------------------S-------S---------
------S-------------------------------------------------S----------S-------S----
-------------------------------------SSS------S---------------------------------
----------------------------------------------------------------SS--------------
SS---------S-S-------------------------------------------SS----------------S----
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S---------------------------S--S-----S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_712
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CCCTTTCCGTTTGCACTTGG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_3015
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TCAACCAAGCACTCGTACGG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
