>input_sequence_73794
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---------------------------------------------ATGAGGAGCTTGACGACGTCTCTCGTGGCGGCGCT
GATGGTACTGCTGCTGTCGGCGCGGGCAGCTCCGGCCGAGCCGTCGACT---------GCATCTACCGTCTGTGACGGCA
ACTACTCGTGCCCCGAGGGCGCGACCTGCTGCTGCATCTACCGGCAGGGCGAGGAGTGCTTCACCTGGACCTGCTGCCCG
CTCCAGGGCACCACCTGCTGCGATGACAGCTACAGCTGCTGCCCGCAAGATTACGGCTTCTGCGACACCAATCTGGGAAC
CTGCCTCATGGTAAATAACTTCAAGTCTTTTATTTTTTGCGAGATAATAACTTCAAGTCTTCAACTGATATAGTTCAGCT
CACCATCTTGTTATGTAGCACTGTCATAACTTCAAGTCTTCAACTGATTACCGACATGTTGTAAATAACCTGCGGATGTT
GATTGCAATTCTCTCACTTCCCCTGTTGCTTGATGAACAGGGTCAGGACAGCCCGCTTTCAGTGAAGGCGCTGAAGCGTA
CAGTGGCCAAGCCGCACTGGGCTTTCTCGTCAGGACCCAAGGGCACTAATATGTCTGAATCTACGGAAGTATTCGACACT
TGCGACAGCACTACTCGGATCTGTAGCACGTTATAA--------------------------------------------
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----------------------------------------------------------------------------
>chr2D_1_TraesCS2D01G517800
GTCCGGGCGGATGTTTGAGGGTCCGGATTTGCCTACTCCTGGTGTGGATGCTCTTACAGGTTGGAAGGGAGCGACGGGTG
TAGGTCAACCCCATTCGCGTGTGGAAGAACATGCGTGGTGGGATTCGAGCCCGGATACTGCTCCACTAATAGAAGCAAGT
CAACCACCGGCTGTTGGGACTGAAGATGAGCTTGCACACATGCGGAGATGCTTTGTTTACACCTATCGGGAGGTGGGGGA
GTTCAGTTGAGAGGTGCCCTGTCTGTCGTGCCATCGGCGGCGCTGCTGCTGCTATCGATGCGGGCAGCTGCGGCTAAGTA
TGCTCTCTGTTCAGTAGGGATGTTCAGTTCGGGGACATTTGAAAATATATGTCAAAGCTGAGTGTCATGTCACAAGCCTT
CACGTTCAGCAATGCGTCGCTCCATTGACGCCTATCCTTTTGCATGATCAAACACCCCGGCCACCAGCGCCGCCAGTTTT
CGTCTTTTCCTTCCATAAACCAGCCCAGTCATCAACATATCAGGTGAACGACAAAGAGGACAAATCGCACGGGAACTCCC
CGTGGAAACACGCTTGCTTGCTCGTCTTACAAATATGAACTCGGAGTAGTGGGGCCTATTTTACAAAACGAGAGAGGTTA
CAATAAGTAGCAGGTACAGCTCAAGATAGATATAGATACCATGTGTAGTGAACATGGATGCTGGACGTGTGTGCGCGTTG
TCCGGAAGCGGTCCAACTGGTGCCGAGGTGCTCCCGGACGGACTCCCTGCTCTGCTTCCTGCTGGCTATTCCCAAGTGGA
CT-----CTAAACAAGAAACCCAAAGAAAAATCTGAGCTGCCACTCCCGGTACAGATCTCCTCCTCTTCCATAAATCCAT
AAATCGACCCCGAAACCACAGCCATCCTCCATGGAAGACAAAGGCACGGCCCAGCGAGTCCCCCGCTGTCCCACTCTTGT
CGCCTGGGCTTCTTCCTCGGCAGCATAGCCTCCCCGTTGCCGGAGATGAGGAGCTTGACGACGTCTCTCGTGGCGGCGCT
GATGGTACTGCTGCTGTCGGCGCGGGCAGCTCCGGCCGAGCCGTCGACT---------GCATCTACCGTCTGTGACGGCA
ACTACTCGTGCCCCGAGGGCGCGACCTGCTGCTGCATCTACCGGCAGGGCGAGGAGTGCTTCACCTGGACCTGCTGCCCG
CTCCAGGGCACCACCTGCTGCGATGACAGCTACAGCTGCTGCCCGCAAGATTACGGCTTCTGCGACACCAATCTGGGAAC
CTGCCTCATGGTAAATAACTTCAAGTCTTTTATTTTTTGCGAGATAATAACTTCAAGTCTTCAACTGATATAGTTCAGCT
CACCATCTTGTTATGTAGCACTGTCATAACTTCAAGTCTTCAACTGATTACCGACATGTTGTAAATAACCTGCGGATGTT
GATTGCAATTCTCTCACTTCCCCTGTTGCTTGATGAACAGGGTCAGGACAGCCCGCTTTCAGTGAAGGCGCTGAAGCGTA
CAGTGGCCAAGCCGCACTGGGCTTTCTCGTCAGGACCCAAGGGCACTAATATGTCTGAATCTACGGAAGTATTCGACACT
TGCGACAGCACTACTCGGATCTGTAGCACGTTATAACGGTTCAGTCAACGGCTGGGATATTAGGAAGGACAATCTGACGC
AATAGATTCAATTTACCATTTAGCTTCACCTCCGGCTGCTCTTCCTTCTTTCACCAATAATAACTGCTATTTGCTTTTAC
CATAATGATTCGGCTATGGATATACAGCCGAGTAAGGAGACCTTCTCCAAACGTTTGGTTATCCTGTCTCAAACAAACAA
AAAAGTTTGGTTATCCATAGTAAACCTTACCCACCGTTGCGGTTGAGCAGACGATGGGTATGAACATGGAGCAGACGGAG
TCGGAGTTGGAGTATACCTATGCATAACCAATATGGTGAATAGAACCAGTTAAACTTATCGATAAGTTTTTAGACCTTGG
TTTTCCTGGCAGTAAACAAAGAACAATGTAAATACCTGGAAACTGTGGTTGGTGTGGCTGACAGGTGGCAGTACGTATGT
GTATCAAACACAATGAATAATCATTCTTTATTGATGCTTGAGCTTACAAATATATAGCCCCTGGACGGACGCCTTTGTGC
GGACGTGACGCCTTGTGTGGACGCGAGCGACTTAATTAACTCATGGTTAATTAAACCTCAACACTCCCATAATCTCTGCT
ATCTTTTCAAACATCAACATCGTCTTGTTTAAAATCTCCTCCAAAAATCCTATGGAGATATACATAAGATACCATGAAAA
ACTCATTCCAAAAACGCAGTGGGAAAATAAGGAAAAAAAGGACATATCATGATGCTTGTTTTTTTTTGCGGAAAAGATCA
GATCTATTATAAATACTCATCGAAAGTATAAATCACATCGAGGGCCGTCGCCAGAACAAGGCGCCGGCGCGCCGCTCCCA
TACCGGAGCCGGCCTGACATTGTCGATGACAGCCGGGAAATCTTCATGCACGTGCCCGTAAGGACCAGCGTCCCGGAGCC
TAGGGATAGCAATTGGTAGGTATGGACGGGTACAACCTCCTTCTGCCCAAACCCATACCCATGGAAAATTTCTATA
>chr2B_686
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---------------------------------------------TAGTGAACATGGATGCTGGACGTGTTTGTGCATTG
TCCGGAAGTGGTCCAACTTGGGGGGAGGTGCTCTCGGACTCCCAAAG----------------------TCCCAAGTGGC
CTCTAAACTAAACAAGAAACCCAAAGGAGAATCTGAGCTGCCACTCCCGGTACAGATCTCCTCCTCTTCCATAAATCA--
------ACCACGAAACCACAACCATTCTCCATGGAAGACAAAGGCACGGCCCAGCGAGTCCCACGCTGTCCCACTCTTGT
CGCCTGGCCTTTTTCCTCGGTAGCATAGCCTTACCGTTGCCGGAGATGAGGAGCTTGACGACGTCTCTCGTGGCGGCGCT
G------CTGCTGCTGTCGGCGCGAGCAGCTGTGGCAGAGCCGTCGACTGCCACCCCGGCACCTACCGCCTGTGACGACA
ATTACTCGTGCCCGGAGGGCACGACCTGCTGCTGCATCTATCGGCAGGGCGACGATTGCTTCACCTGGACCTGCTGCCCG
CTCCAGGGCACCACCTGCTGCGACGACAGCTACAGCTGCTGCCCCCATGACTACGGCTTCTGCAACACCAATCTTGGAAC
CTGCCTCATGGTA-------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------S--S--S---
--------S---------S-S-SS---------S-----SSS-SSSSSSSSSSSSSSSSSSSSSSSSSS----------S
--------------------------S-S------------------------------------------------SSS
SSSSSS---S----------S----S------------------------------------S-----------------
-------S---S--------S----------SS-----------------------------------------------
-SSSSSS-----------------S------SS---S------------------------S------S--------S--
-S-----------S------S-------------------S-----------S--S------------------------
-----------------------S--------------------S--S--S------------S----------S-----
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_488
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--------------------------------------------------------------------GCCGCCAGTTTT
CGTCTTTT------------------------------------------------------------------------
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>reverse_1541
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--------------------GCTTTCTCGTCAGGACCCAA----------------------------------------
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>forward_1264
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--------------------------------------------GCAAGATTACGGCTTCTGCG----------------
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>reverse_2603
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------------------------------------------CTGCCCAAACCCATACCCAT--------------
