>input_sequence_73788
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ACATCCAAACCAGAGTTCAAAGACAACGTCAGGATAGAGAACAGAGCAACAGCGGAAAGAAGAGTCGTTTGGTACTCGAC
GCAGACCAAGTTTGCTAGGAAACTCGGTTGCTGCCGGCCGGCAGCTTGGCTGATCGACCATGGACAAGATCCTGGCTTTC
TCGATCCTCAGCTCGTCACCGGCAGAGATTGCTGGGGCCGGGTACGCCATGCGGCTGTCCTGGCGGAGCGCCGGAGGAAA
GCAGGCGA---CCGAGAAGAAGCAGCAGGAGGACAAAGTCGAGCGGAGCCCACGGGCAGAGAGGAAGCAGGAGGCGAGGC
CGGCAGGGTTTGCGCCGGAGTTCGACGAGCTCAACTGCTTCGAGTAGATAGTATCCTCTTGAGTGGGTCGCTGGCTGTCT
CCGAGTAGTTTTTCTCCTTTTTCACTTCCCCATCTGCTACTTTTTTTACGT-----------------------------
--TTGGTTGATTATTGACCAAGAGACTTACCATGTCCACAGCGAGAGAATGAATGACCTCACAATCACACAGTTGTTTGA
TTTACTGACGCCTTGTATATGATGGTGTTTACGTTGTGATTCGAAAGGATAACTTTTCACCAATAATGGCAGGTTCCTCC
CACCAAGCCCCAAAAAA---------------------------------------------------------------
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>chr7D_1_TraesCS7D01G067900
CTCTCCTCTTCACCCCCGTCCTAGACCCCGGGTGAAAACCCAAAACCCGTCTCGGGTTGGCCGGCGGCGGCGCCTAGTAT
GTCGCGTCCTTGTTGGAGGCGCCGTCTT-------------------------------TGGTTGGTGGGCGTCCGTCGG
CTGCGAGGCCAAGTTTGCGTTTTTCTGTGGAGGGTGCTCGTTCCTGCAAGAGTCCTTCTTGCGGCCA-TGGAACGGGACC
TGGTGCTCCCCTGCTTCGCCTCTTGGCCTCGGCAGCTTTCTTCTTCGGCGACCTCCCGACGGCTATCCTTCTGCTCTTGG
TTGTTCAGGAGAGGTGGCAGTGCAGCTGTGGTGTGTGCCTGCGGCGTGGCGAGGGCTGTGCAACTTGTCTGCGATGGGGA
TCCGGCTGGCGTCTGCTCTAGTTCTCGGGTGAGCGCCAACGATCCGACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTCTTCGGCGTTGGGAGCGATGT-TCTTCCCTTGCCCTTGGGTTCAGACAGTTCACACCTTTCTCTGGCCTTT
GGCTGATCATCGAGGCTTCTCTGTGGCTCCTCTCTCTGTTGACTATGTGCAGTAGGTTTCGACACTACTAGCAGGGCTCT
TCATGTATTTT-CTTTCTGCTCTAGTGTGTGTTGCATTAAATAGTGGCCACAGTCCATCTGGCCCATTTCTTTTCTTGGG
ACGAGCTTGACCGACCCGGCGGCAGCTAGTGAGCCCCGCCTAGTTCGTTCAATTCAGGGCGGCCCTTGCAGGACGGTGTC
GGGCTGGGTCGCCTAAGGCCACCTCTCCCACTCCGTAAACACTGGATCCCGTCATACTCTCTCATGTCGTTCTTGCTTCC
TGCCGTGTGCCGGTCAGAGTCGGTGTCCCCTGTCCGCGGCGTCCATGGACTTTCCATCCTGCCGCGTCACCGCTCCTTCA
ACAA-CCCGGTTTGCCTCCCCCCTCCTACCC-----CCCCTACGTGTATATATATCATCAGTCGGCATGTGTGGGAAAGC
ACATCCAAACCAGAGTTCAAAGACAACGTCAGGATAGAGAACAGAGCAACAGCGGAAAGAAGAGTCGTTTGGTACTCGAC
GCAGACCAAGTTTGCTAGGAAACTCGGTTGCTGCCGGCCGGCAGCTTGGCTGATCGACCATGGACAAGATCCTGGCTTTC
TCGATCCTCAGCTCGTCACCGGCAGAGATTGCTGGGGCCGGGTACGCCATGCGGCTGTCCTGGCGGAGCGCCGGAGGAAA
GCAGGCGA---CCGAGAAGAAGCAGCAGGAGGACAAAGTCGAGCGGAGCCCACGGGCAGAGAGGAAGCAGGAGGCGAGGC
CGGCAGGGTTTGCGCCGGAGTTCGACGAGCTCAACTGCTTCGAGTAGATAGTATCCTCTTGAGTGGGTCGCTGGCTGTCT
CCGAGTAGTTTTTCTCCTTTTTCACTTCCCCATCTGCTACTTTTTTTACGT-----------------------------
--TTGGTTGATTATTGACCAAGAGACTTACCATGTCCACAGCGAGAGAATGAATGACCTCACAATCACACAGTTGTTTGA
TTTACTGACGCCTTGTATATGATGGTGTTTACGTTGTGATTCGAAAGGATAACTTTTCACCAATAATGGCAGGTTCCTCC
CACCAAGCCCCAAAAAAACCTTGATACTCTCTTTGTAAATAAATATAAGAGCTTTTAGATCACTACTTTAATGACCTAAA
TACTTTTACATTTCTTTGGGGAGGGAGTACTTTGTTAGTACAATAGTACAGTA-TATGCAAAGAAAAGGGATAACAGCAC
TAGTTTATTGGCTC-GAGTGCCAAACAAAGTGTCATGGATAGACACGCCAACGTCCTTGTCGACCAACGCCAAGG-TTGT
TGCCCTGGAGAGGTTGTATACAGAGCTTGTGGCGCCAGCAACACCAATAGGAGCTCAACCACAGGCGCTATGGCAAACAC
ATTCTACTCGATTGACTGCGACAGCATGCGCGCGATCAGGAGGTCTGTGGTTTCCTCGAGAGATTGCGTGGCTGGATAGA
GGCCATCTTCTCCATGTCGAAGTCTGTTGGAATGCTCAACGCCTCAATGGTGTCCCCGGACGCTGAATCAACTGTCGGAG
AGGGTTGCGCGCCTGGGGAAAATATCCTGTGCTCCAATTGATTGTGTGCTCCGGCTGCTTCCTATTAACCACATCCCTTA
GATACATAATTTAGGGATAAGATGCAAGCCGAGCGCTCCGCCATTAGAAATTGGCAAAGAACACCCTGAATGCATACAAA
ATTAGTAGTATTTTCCAATCA-------CCTACCTCTAAGCCA-GCTGCTGTTCCCAAATTGGAAAAGAAGCAACGCCAA
CAAAAGTAGGGCTTTGGGCCTCTGGCGGCGAACCTGTGATGCCGGGCGAACGTTGTCGCCACGGTGCTGACGTACTGGGC
TCCGACGTCCGGCGGGCAAACTCGCCCCATCCCCGCCCTGCCATTCTCCACCTCTCT-CCCTTCCCTATCCAATCAGGCA
CCTACCTGTGCGATCCATCGACGCTGGAGAATAGAACTCCGGTCTTCAAGTATGTTGTTAGATGTTAGAAGCTTGTGTTG
TTTTATGCGTTTGATTGTAATCCATCATTCCCTTTATGTTGATTTCCTAGCTATTTCTATCTTGGAAAA
>chr5D_1
CTCTCCTCTTCACCCCCGTTCCAGACCCCGGGTGAAAACCCAAAGCCCGTCTCGGGTTGGCCGGCGGCAGCGCCTAGTGC
GTCGCGTCCTTGTTGGAGGCGCCGTCTTGGGTGTCTGGTTCTTTGGGAGAGGGATGAGGTGGTTGGTGGGCGTCCGTCGG
CTGCGAGGCCAAGTTTGCTTTTTTCTGTGGAGGGTGCTCGTTCCTGCAAGAGTCCTTCTTGCGGCCA-TGGAACGGGACC
TGGTGCTCCCCTGCTCCGCCTCTTGGCCTCTGCAGCTTTCTTCTTCGGCGACCTCCCGACGGCTATCCTTCTGCTCTTGG
TTATTCAGGAGAGGTGGCAGTGCAGCTGTGGTGTGTGCCTGCGGCGTGGCGAGGGCTGTGCAACTTGTCTGCGATGGGGA
TCCGGCTGGCGTCTGCTCTAGTTCTCAGGTGAGCGCCAACGATTCGACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTCTTCGGCGTTGGGAGCGATGT-TCTTCCCTTGCCCTTGGGTTCAGACAGTTCACACCTTTCTCTGGCCTTC
GGCTGATCATCGAGGCTTCTCTGCTACTCCTCTCTCTGCTGACTATGTGCAGTAGGCTTCGACACTACTAGCAGGGCTCT
TCATGTATTTT-CTTTCTGCTCTAGTGTGTGTTGCATT------------------------------------------
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>chr3A_1
CTCTCCTCTTCACCCCCGTCCCATACCCTGGGTGAAAACCCAAAACCCGTCTCGGGTTGGCCGGCAGCGGCGCCTAGCGC
GTCGCGTCCTTGTTGGAGGCGCCGTTTTGGGTGTCTGGTTCTTCGGGAGAGGGATGAGGTGGTTGGTGGGCGTCCGGCGG
CTGCGAGGCCAAGTTTGCGTTTTTCTGTGGAGGGTGCTCGTTCCTGCAAGAGTCCTTCTTGCGGCCA-TGGAACGGGACC
TGGTGCTCCCCTGCTCCGCCTCTTGGCCTCGGCAGCTTTCTTCTTCGGCGACCTCCCGACGGCTATCCTTCTGCTCTTGG
TTGTTCGGGAGAGGTGGTAGTGCAGCTGTGGTGTGTGCCTGCGGTGTGGCGAGGGCTGTGCAACTTGTCTGCGATGGGGA
TCCGGCTGGCGTCTGCTCTAGTTCTCGGGTGAGCGCCAACGATCCGACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTCTTCGGTGTTGGGAGCGATGT-TCTTCCCTTGCCCTTGGGTCCAGACAGTTCACACCTTTCGCTGGCCTTC
AGCTGATCATCGAGGTTTCTCTGCTGCTCCTCTCTTGGTTGCCAATGTGCAGTAGGTTTCGACACTACTAGCAGGGCTCT
TCATGTATTTT-CTTTCTGCTCTAGTGTGTGTTGCATT------------------------------------------
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>chr7B_1
CTCTCCTCTTCACCCCCGTCCCAGACCTCGGGTGAAAACCCAAAACCCATCTCGGGTTGGCCGGCGGCGGCGCCTTGTGC
GTCGCGTCCTTGTTGGAGGCGCCGTCTTGGGTGTCTGGTTCTTCGGGAGAGAGTTGAGGTGGTTGGTGGGCGTCCGTCAG
CTGCGAGGCCAAGTTTGCGTTTTTCCGTGGAGGGTGCTCGTTCCCGCAAGAGTCCTTCTTGCGTCCA-TGGATCGGGACC
TGGTGCTCCCCTTCTCCGCCTCTTGGACTCGGCAGCTTTCTTCTTCGGCGACCTCCCGACGGCTATCCTTCTGCTCTTGG
TTGTTCAGGAGAGGTGGCAGTGCAGCTGTGGTGTGTGCCTGCGGCGTGGCGAGGGCTGTGCAACTTGTCTGCGATGGGGA
TCCGACTGGCATCTGCTCTAGTTCTCGGGTGAGCGCCAACGATCCGACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTCTTCGGCGTTGGGAGCGATGT-TCTTCCCTTGCCCTTGGGTTCAGACAGTTCACACCTTTCTCTGGCCTTC
GGCTGATCATCGAGGCTTCTCTGCTGCTCCTCTCTCTGTTGACTATGTGCAGTAGGCTTCGACACTACTAGCTGGGCTCT
CCATGTATTTT-CTTTCTGCTCTAGTGTGCGTTGC---------------------------------------------
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>chr7A_1
CTCTCCTCTTCACCCCCGTCCCAGACCCCGGGTGAAAACCCAAAACCCGTCTCGGGTTGGCCGGCGGCGGCGCCTAGTGC
GTCGCGTCCTTGTTGGAGGCGCCGTCTTGGGTGTCTGGTTCTTCGGGAGAGGGATGAGGTGGTTGGTGGGCGTC----GG
CTGCGAGGCCAAGTTTGCGTTCTTCTGTGGAGGGTGCTCGTTCCTGTAAGAGTCCTTC--GCGGCCA-TGGAATGGGACC
TGGTGCTCCCCTGCTCCGCCTCTTGGCCTCGGCAGCTTTCTTCTTTGGCGACCTCCCGACGGCTATCCTTCTGCTCTTGG
TTGTTCAGGAGAGGTGGCAGTGCAGCTGTGGTGTGTGCGCGCGGCGTGGCGAGGGCTGTACAACTTGTCTGCGATGGGGA
TCCGGCTGGCGTCTGCTCTAGTTCTCGGGTGAGTGCCAACGATCCGACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTCTTCGGCGTTGGGAGCGATGT-TCTTCCCTTGCCCTTGGGTTCAGACAGTTCACACCTTTCTCTGGCCTTC
GGCTGATCATCGATGCTTTTCTGCTGCTCCTCTCTCTGTTGACTATGTGCAGTAGGCTTCGACACTACTAGCAGGGCTCT
TCATGTATTTT-CTTTCTGCTCTAGTGTGTGTTGCATT------------------------------------------
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>chr5B_1
CTCTCCTCTTCACCCCCGTCCCAGACCCCGGGTGAAAACCCAAAACCCGTCTCGGGTTGGCCGGCGGCGGCGCCTTGTGC
GTCGCGTCCTTGTTGGAGGCGCCGTCTTGGGTGTCTGGTTCTTCGGGAGAGGGATGAGGTGGTTGGTGGGCGTCCGTCGG
CTACGAGGTCAAGTTTGTGTTTTTCCGTGGAGGGTGCTCGTTCCCGCAAGAGTCCTTCTTGCGGCCA-TGGAACGGGACC
TGGTGCTCCCCTGCTCCGCCTCTTGGACTCGACAGCTTTCTTCTTCGACGACCTCCCGACGGGTATCCTGCTGCTCTTGG
TTGTTCAGGAGAGGTGGCAGTGCAGCTGTGGTGTGTGCCTGAGGCGTGGCAAGGGCTGTGCAACTTGTCTGCGATGGGGA
TCCGGCTGGCATCTGCTCTCGTTCTCGGGTGAGCGCCAATGATCCGACGGTGCGGCGCCTTCGAGCCTAGGCAAGAGGAA
AGGATTCCTCTTCGGCGTTGGGAGCGATGT-TCTTCCCTTGCCCTTGGGTTCAGACAGTTCACACCTTTCTCTGGCTTTC
GGCTGATCATCGAGGCTTCTCTGCTGCTCATCTCTCTGTTGACTATGTGCAGTAGGCTTCGACACTACTAGCTGGGCTCT
CCATGTATTTT-CTTTCTGCTCTAGTGTGTGTTGC---------------------------------------------
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>chr6A_5
----CCTCTTCACCCCCGTCCCAGACCCCGGGTGAAAACCCAAAACCCGTCTCGGGTTGGCCGGCGGCGGCGCCTAGTGC
GTCGCGTCCTTGTTGGAGGCGCCGTGTTGGGTGTCTGGTTCTTCGGGAGAGGGATGAGGTGGTTGGTGGGCGTTCGGCGG
CTGCGAGGCCAAGTTTGCGTTTTTCTGTGGAGGGTGCTCGTTCCTGCAAGAGTCCTTCTTGCGGCCA-TGGAACGGGACC
TGGTGCTCCCCTGCTCCACCTCTTGGCCTCGGCAGCTTTCTTCTTCGGCGACCTCCCGACGGCTATCCTTCTGCTCTTGG
TTGTTCAGGAGAGGTGGTAGTGCAGCTGTGGTGTGTGCCTGCGGCGTGGCGAGGGCTGTGCAACTTGTCTGTGATGGGGA
TCCGGCTGGCGTCTACTCTAGTTCTCGGGTGAGCGCCAACGATCTGACGGTGCGGTGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTCTTCCGCGTTGGGAGCGATGT-TCTTCCCTTGCCCTTGGGTTCAGACAGTTCACACCTTTCGCTGGCCTTC
GGCTGATCATCGAGGCTTCTCTGCTGCTCCTCTCTCTGTTGCCTATGTGCAGTAGGTTTCGACACTACTAGCAGGGCTCT
CCATGTATTTT-CTTTCTGATCTAGTGTGTGTTGCATT------------------------------------------
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>chr6D_109
--------------------------------------------------------------------------------
-----------------------------------------------------------TGGTTGGTGGGCGACCGTCGG
CTGCGAGGCCAAGTTTGCGTTTTTCTGTGGAGGGTGCTCGTTCCTGCAAGAGTCCTTCTTGCGGCCA-TGGAACGGGACC
TGGTGCTCCCCTGCTCCACCTCTTGGCCTCTGCAGCTTTCTTCTTCAGCGACCTCCCGACGGCTATCCTTCTGCTCTTGG
TTGTTCAGGAGAGGTGGCAGTGCAGCTGTGGTGTGTGCCTGCGGCGTGGCAAGGGTTGTGCAACTTGTCTGCGATGGGGA
TCCGGCTGCCGTCTGCTCTAGTTCCCGGGTGAGCGCCAACGATCCGACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTCTTCGGCGTTGGGAGCGATGTGTCTTCCCTTGCCCTTGGGTTCAGACAGTTCACACCTTTCTCTGGCCTTC
GGCTGATCATCGAGGCTTCTCTGCTGCTCCTCTCTCTGTTGACTATGTGCAGTAGGCTTTGACACTACTAGCAGGGCTCT
TCATGTATTTT-CTTTCTACTCTAGTGTGTGTTGCATT------------------------------------------
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>chr4B_109
--------------------------------------------------------------------------------
-----------------------------------------------------------TGGTTGGTGGGCGTCCGTCGG
CTGCGAAGCCAAGTTTGCGTTTTTCCATGGAGGGTGCTCGTTCCCGCAAGAGTCCTTCTTGCGGCCA-TGGAACGGGACC
TGGTGCTCCCCTGCTCCGCCTCTTGGACTCGGCAGCTTTCTTCTTCGGCGACCTCCCGACGGCTATCCTTCTGCTCTTGG
TTGTTCAGGAGAGGTGGTAGTGCAACTGTGGTGTGTGCCTGCGGTGTGGCGAGGGCTGTGCAACTTGTCTGCGATGGGGA
TCCGGCTGGCATCTGCTCTAGTTCTCGGGTGAGCGCCAACGATCCGACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTATTCGGCGTTGGGAGCGATGT-TCTTCCATTGCCCTTGGGTTCAGACAGTTCACACCTTTCTCTGGCTTTC
GGCTGATCATCGAGGCTTATTTGCTGCTCCTCTCTCTGTTGACTATGTGCAGTAGGCTTCGACACTACTAGCTGGGCTCT
CCATGTATTTT-CTTTCTGCTCTAGTGTGTGTTGC---------------------------------------------
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>chr2A_109
--------------------------------------------------------------------------------
-----------------------------------------------------------TGGTTGGTGGGCGTCTGTCGT
CTGCGAGGCCAAGTTTGCGTTTTTTTGTGGAGGGTGCTCGTTCCTGCAAGAGTCCTTCTTGCGGCCATTGGAACGGGACC
TGGTGCTCCCCTGCTCTGCCTCTTGGCCTCTGCAGCTTTCTTCTTCGGCGACCTCCCGATGGCTATTCTTCTGCTCTTGG
TTGTTCAGGAGAGGTGGCAGTGCAGCTGTGGTGCGTGCCAGCGGCGTGGTGAGGGTTGTGCAACTTGTCTGCGATGGGGA
TCCGGCTGGCGTCTGCTCTAGTTCTTGGGTGAGCGCCAACGATCCAACGGTGCGGCGCCTTCGAGCCTAGGCGAGAGGAA
AGGGTTCCTCTTCGGCGTTGGGAGCGATGT-TCTTCCCTTGTCCTTGGGTTCAGACAGTTCACACCTTTCTCTGGCTATC
GGCTAATCATCAAGGCTTCTCTGTTGATCCTCTCTCTGTTGACTATGTGCAGTAGGCTTCGACACTACTAGCAGGGCTCT
TCATGTATTTTTCTTTCTGCTGTAGTGTGTGTTGCATT------------------------------------------
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>chr7D_741
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------------------------------------------------------CAGCGCGGAGCTTGCAGGACGGTGTC
ATGCCGGGTCGCGTCATGCCACTTCTCCCACTCGGTAAACAATCAAACTAGTCAAACTCTCTCAGGCCGTTCTTGCTTCC
TTCAGTGTGCCTTTCAGAGTCGGCGTCCCCGTCCGCAG----CCGTGGGCTCTCGGTCCTGCCACGTCACGGCTCCTTCA
ACCACCCCGCTTTGCCTCCCCCCTACTATCCTATCTCCCGTACGAGTATATATATCATGAATCGGCGTGCGTGGGAAAGT
ACATCCAGACCAGAGTTCAGAGACTTAGTCAGGACAGAGAACAGAGCAACAGCGGAAAGAAGAGTCGTTTGGTACACAGC
GCAGACCAAGATTGCTAGAAAACTATGTTGCTGCCGGCCGGCAGCTCGGCTGATCGACCATGGACAATATCCTGGCTTTC
CCGACCCTCAGCCCATCGCCGGCAGAGATCGCTGGGGCCGGGTACGCCACTCATCTGTCCTAGCTGAGCGGCGGCGGGAA
GCAGGCGACGGCGGAGAAGAAGGAGCAGGAGGACAAGGTCGACCAAAGCCCACGGTCAGAGAGGAAGCGGGAGGCCAGGC
CGGCCCGGTTTGCGCCAGAGTTCGACGGCCTCAACTGCTTCGAGTACGTAGTATCCTCTTGAGTGGGACATCGGTTGTCT
CCCCACAGTTTTTCTCCTTTCTC---------------------------------------------------------
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>chr7D_746
CGGCGCTTGTAG--------------------------------------------------------------------
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----------------------------------------------------------------------GGGCGGTGTC
TTGCCGGGTCGCCTCACGCCACCTCTCCCACTCCGTAAACAACGGATCCCGTCGAACTCTCTCATGTCGTTCTTGCTTCC
TGCCGTGCGCCGGTCAGAGTCGGCGTCCCC-----------------------------------------GCTCCTTCA
ACCACCCCGCTGG-----------------------CCCGTACGTGTATATACATC---AGTCGGCTTGTGCTGGAAAGC
ACATCCAAACCAGAGTTCAGAGACAAAGCAAGACAGAGGAACATAGCAACAGCCGAAAGAACAGTTGTTTGCTACACAGC
GCAGACCAACTTTGCCAGGAAACTCTGTTAGA---GGCCGGCAGCTCGGCTACTCGATCATGGACAGGATCTTTGCTTTC
TCCATCCTCAGCTCGTCGCCGGCAGAGATTGCTGGGGCCGGGTACGCCATGCGTCTGTCCTGGCGGAGCGGCGGAGGGAA
GCAGGCGA---CGGAGAAGAAGCACCAGGAGGACAAGGTCGAGCGGAGCCCACGGCCGGAGAGGAAGCGGGAGGCCAGCC
CGGCACGGTTTGCGCCGGAGTTCGACGGGCTCAACTGCTTCGAGTACATAATATCCTCTTGACTGGGTCGCCGGCTGTCT
CCTGGAAGCTTTTCTTCTTTTTCACTTACACACCTGCTCTGTTTCGAAAAAAGAAAACCTACACATCTGTTGCCCTGTGA
GATTTGTTGCCTACTGACGAAGAGACTTGGCATGTACACAGCGAGAGAATGAATGAGCTGATAGTTACGCACTGGTTTG-
TTTACTGATGCTTGTAAGATGGTGTTGTTTACGTTGGGAATCGAAACCATTATT--------------------------
CACCAGGACCCACAAAAACCTTGATAC-----------------------------------------------------
---------------------------TACTTTATTAGTACAATAGTACAGTACTATGCAAAGAAAAGGGATAACTACAC
TAGTTGATTGGCTCTGAGTGGCAAACAAAGTGTAAGAACG-GACACGTTAGCGTCCTTGTCAACCAACGCCAATGTTTGT
TGCCCTGGAGAGGTCGTAGACAGAGTTTGTGGCACCAGCAATACCAACAGGAGCTCAAGCGCAGGCGTTATGGC------
----------------------------------------AGGTCTGTGGTTTCCTGGAGAGATTGCATGGCTGGATAGA
GGCCATCTTCTCCATATCGAAGTGTGTCGGGATGCTCAACGCCTCAACGGTGTCCCCGGGTGCTGGATCCACTGTTGAAG
AGGGCTGCGCACCTAGGGAAAATATCATGTGCTCCCATTGATTGTGTGCTCTGACTACTCTCGGTGAACCACAGCCGTTA
GATACATAATTTAGGCACAGGATGCAACCCGAGCGCTCCGCCCTTAGAAATTTGCAAACAACACCCCAAATGCATATAGA
ATTAGTAGTATTTCCCCGTCA-------CCTACCTCTAAGCCGTGCGGCTGTTCTCAAATTGGAAAAGAAGGAACTCGAA
CAAA-GTAGGGTGTTGGTCCTCCGGCGGGGGACCTGTGATGCCGGGTGA------------------------ACTGGGC
TCCGAAGTCCGGCGGGCAAACTCGCCCCATCCCCACCCCGCCATTCTCCACCTCGGC-ACCTTCCCCACCCGATCTGGCG
CCTACCTGCAAGATCCGTCGACTCTGGAGAATAGAAGTCCGATCTTCAGGTATGTTGTTAGATGTTAGAACCTTGTGTTA
TTGTGTGCGTTTGATTGTAATTCATCATTCCCTTCGTGCTGATTTTGTAGCTAATTCTATATTGGAAAA
>chr3B_2098
GGGGA---------------------------------------------------------------------------
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--------------------AATATCCTGTGCTCCAATTGATTGTGTGCTCCGGCTGCTCCCTGTGAACCACAGCCGTCA
GATACATAATTTAGGCACAGGATGCAACCCAAGCGCT-CGCCCTTAGAAATTTGCAAACAACACCCTGCATGCATACAGA
ATTAGTAGTACTTCCCCGTCA-------CCTACCTCCAAGC----CGGCTGTTCCCAAATTAGAACAGAAGCAACGCGAA
CAGA-GTAGGGCTTCGGGCCTCCGGCGGCGGACCTATGACGCGGGGCGAACGCGGTCGCCGCGGTGCTGACATACTGGGC
TTCGATGTCCGGCGGGC-AACTCGCCCCATCCCCGCCCCGCCATTCTCCACCTCA-CCCCCTTCCCCACCCGATCTAGCG
CCTACCTGCGCCATCCGCCGACGCTGGAGAATAGAACTCCGGTGTTCAGGTATGTTGCTAGATGTTAGAACCTTCTGTTA
TTTTGTGCATTTGATTGTAATCCGTCATTCCCTTTATGCTGA-TTTGTAGCTAATTCTATCTTGGAAAA
>chr3D_2101
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-----------------GAAAATATCCTGTGCTCCAGTTGATTGTGTGCTCCGGCTGCTCCCTGTGAACCACAACCGTTA
GATACATAATTTAGGCACAGCATGCAACCCGAGCGCT-CGCCCTTAGAAATTTGCAAATAACACCCTGCATGCATACAAA
ATTAGTAGTATTTCCCCGTCACCTACATCCTACCTCCAAGC----CGGCTGTTCCCAAATTAGAACAGAAGCAACGCGAA
CAGA-GTAGGGCTTCGAGCCTTCGGCGGCGGACCTGTGACGCCGGGCGAATGTGGTCGCCGCGGTGCTGACGTACTGGGC
TCCGACGTCCGGCGGGC-AACTCGCCTCATCCCTGCCCGGCCATTCTCCACATCGCCCCCCTTCCCCACCCGATCTGGCG
CCTACCTGCGCCATCCGTCGACCCCAGAGAATAGAACTCCGGTGTTCAGGTATGTTGTTAGATGTTAGAACCTTGTGTTA
TTTTGTGCGTTTGATTGTAA---GTCGTCCCCTTTGTGCTGATTTTGTAGCTAATTCTATCTTGGAAAA
>chr3D_2104
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--------------------AATATCCTGCGCTCCAATTGATTGTGTGCTCCGGCTGCTC-CTGTGAACCACAGCGGTTA
GATACATAATTTAGGCACAGGATGCGACCTAAGCGCT-CGCCCTTAGAAATTTGCAAACAACACCCTGCATGCATACAGA
ATTAGTAGTATTTCCCTGTCACG-------TACCTCCAAGC----CGGCTGTTCCCAAATTAGAACAGAAGCAACGCGAA
CAGA-GTAGGGCTTCGGGCCTCCGGCAGCGGACCTGTGACGCCGGGCGAACGTGGTCGCCGCGGTGATGACGTACTGGGC
TCCGACGTCTGGCGGGC-AACTCGCCCCATCCCCGCCTGGCCATTCTCCACCTCACCCCCCTTCCCCACCCGATCTGGCG
CCTACCTGCGCCATCCGTCGACGCCGGAGAATAGAACTCCGGTGTTCAGGTATGTTGTTAGACATTAGAACCTTGTGTTA
TTTTGTGCGTTTGATTGTAATCCGTCGTCCCCTTTGTGCTGATTTTGTAGCTAATTCTATCTTGGAAAA
>SNPs
---------------------S--------------------------------------------------------SS
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
------------------------S-------------------------------------------------------
--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----SS----------------
SS--S---------S-S------------------------S------------S-------------------------
-----------------------S------SSS-SSS-SSSS--S---S--S--SS-------S------S---------
--S------S--------------S---S----------S------------------S-------S-------------
-------------------S------S-------S----------------------------------------S-SS-
-------------------------S--------------------S---------------------------------
-----------------S-----------------------------------S----------------S------S--
------------S-----------------------S------------------S------------S------S----
-----S---------------------S------------------S------------------------S--------
--SS-S---------------------S-S--S-----SSS---SSS-SSS-----------------------------
----S----SS--S----S---------SS-----S--------------------S--S-S-S-S--S--S-S-----S
--------S--S-SSS-S---S--S-----------S--S------SS--S-S-SSSSSSSSSSSSSSSSSSSSSSSSSS
-----S-S----S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----------------------------------------SS---
-----S--------------S------------S-SSSSSS------SS-S----------S-----------S------
--------------S---S------S-------S-------S-----S----------S-S------S------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S----------S------------
---------------S-------S---S--S----------------S-----------SS----S---S-----S-S--
----S-----S---S--------------------------------------------S---S-S-------S--S---
---------------S-S-S-------S--------------S---------S-----S---------------------
-------------S--SS------------------------S---S------------------------------S--
----S-----------------S-------S----------------------S------S-------------------
--------------------------------------S---------------S-S---------S-S--S---S---S
--------S-------S-------------------------------S---------------------S--------S
----S---------------------------------S------SS------S---------------
>forward_732
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------------------------------------------------------------------------TTCTTGGG
ACGAGCTTGACC--------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_2039
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GGAGGTCTGTGGTTTCCTCG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
