>input_sequence_73787
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------------------------------------------------ACCCGAGCAG-CCTCTCCGATCTCCCATCCCA
GCGCCCCCAGCACCCCCCGCGATGGCCCGCACGAAGCAGACGGCGCGCAAGTCCACCGGCGGCAAGGCCCCGCGGAAGCA
GCTGGCGACCAAGGCGGCGCGCAAGTCGGCCCCGGCGACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCGGGCACCG
TGGCGCTGCGCGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTCCGC
GAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGGCCTA
CCTCGTCGGCCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGC
TCGCCCGCCGCATCCGCGGGGAGCGCGCCTAGGCGCCTCGCTCGCCGCACTGCTAGGTGTTTTAGGCTCCCTGTTCCCGT
CGTGTTCCATGTGTGCGTCGCTCCTATGTAACTGGCTTGTTGCTGTGCTTCGATGTACTACTTATATCGATGAAATATGG
CTACCAGGATGAGATAAAATCCCTCTGA---ATTA---------------------------------------------
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>chr6A_1_TraesCS6A01G155800
CTGCCAGAGCCGCTTCTGGAACTCCACATTCGCCCCCACATGGCGGCTGGAGGCGGGGCGGGTGGTCGCCGACGGCGAGA
AATTGAGAGAGTGGAAAGGGGAATCGGATGGCTCACGGCGGCGAGGGGATATGGTTTGAACCCGCAAAAGGGTCGTGGAA
CCGCACTTATAGTGCTCAGGGCGTGCGGTTTGCGGGCTGCGGCAACATTTTTTGCGGGCCGGGCGAGTATGCGGGTTCTG
TTCTGGCCGGAAAATTGGCCCGAACCCGCATACTCGCCGGAATTTTTGCGGGCCGGACGTTTTGCGGAGTCTGCTAGAGT
TGCTCTGAGCGGACCAACGTACCCCCACTCATTACAGTAAAGGAGAAAAATGCACAATTGGATCTATGTGTCAGCTTGAA
TTCTATAGGATTAGGAATTCATGAAATTTTTGAAAAAAAACGTTTGATTCCACATGAAAAACAAATGAATTGTACCAAGA
GATTTGAGTGGATGAAACCCCCCTACAAAATGGACTGCAAAGCAATTCTTAGGAGTTTTCCTAAGGATTTATCATACAAA
TTAAACAGGTTATATATGGAAAAAAACCCTATGAATCTGAATCCTAAAAAACATATGGAATTCGTTTGAATTAAAGAGCC
ATGAAAAGTTAGAGCAATGTGC--TGGGACGGCCATA-CTGCTACAGTCC--TACTGTGATTGAGTTGGCCCGCGTAGCC
GCGTGAGCAGTGTGGCCGCGTCGAGACGTGAAGCAGCTGCCAGATGGCAGTCTGCCATTCGCCAGCAGTCCCCGCCCACG
GATCGCGATCCGCGCGACGCCTACAAAA-TCGATCGGCACCCTTCACTCATACGCCATCCGACGGCTCCTGTCTC-CCCT
CCCCCACCCGCGGCCGAATTCCGGATCCGCGCTCCGAGCACCAAATCCATCCGCCTCCTATTTATTCCCCCTCGTCTCCC
CTCCATTTCCACACCGCAAAGCAA-TCTCCCCCGCTCCACTTCAAAACACCCGAGCAG-CCTCTCCGATCTCCCATCCCA
GCGCCCCCAGCACCCCCCGCGATGGCCCGCACGAAGCAGACGGCGCGCAAGTCCACCGGCGGCAAGGCCCCGCGGAAGCA
GCTGGCGACCAAGGCGGCGCGCAAGTCGGCCCCGGCGACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCGGGCACCG
TGGCGCTGCGCGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGCTGCCCTTCCAGCGCCTGGTCCGC
GAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGGCCTA
CCTCGTCGGCCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGC
TCGCCCGCCGCATCCGCGGGGAGCGCGCCTAGGCGCCTCGCTCGCCGCACTGCTAGGTGTTTTAGGCTCCCTGTTCCCGT
CGTGTTCCATGTGTGCGTCGCTCCTATGTAACTGGCTTGTTGCTGTGCTTCGATGTACTACTTATATCGATGAAATATGG
CTACCAGGATGAGATAAAATCCCTCTGA---ATTATT---CTCTTATTTCTGTGCTTGTCTCCACCCTCTGAATTACTGG
CTATAGTTTGTCTGTCAGGCGTTCTGTAATCTGAATGCATCTTTCGAATGGATCTACTTCAAAATTAAAATTGCGGCTGG
TGTGGGTGATTTCTGTGTGGGTTGGCAAAAATATTGAAC-----------------------------------------
-------CAGAGCCTGTGAAAGAGGAGTTGTAATTTATTTGCAGTTTGGCGTCGATGTTGTGATTAAATCAGTCTGATA-
--------------------------CAAACCTCACTTCCTATAAGCCTAC-AAGAGAAGCATGATACTCACCATTCTTT
TGGTACAATGTAGTACAGTATATTTTGTCTTAGATTGTAA-GGGTAACTAGTTCTTAGATTGCAGTGTAAGTCATCTGCT
TATACTCTA-TTTCAGAATACATCTTCATCTTGTGAATTTTTACTTAGTCTGAATATTAGGCTTTCTGAATCCAAGATTG
AGGTTGAAATACGGTCTGCTGGATTGCTTCTGGTTTGTGCTTGCTGCTTACCATGTTTTTTTTTTCTGTCAAATTATGAA
TATGGATTAACATCAAGGCCACAAAAATTGTTGAACCAACTGCGGTTCTTGTGAATGAGTAGCTGGAATGTGTTTGCAGG
AACTGCAATTCGTTCATTTGGGAATTGGGAGTGAACTGTGATCCGGAGTCTGAACTTTCATCAAGGTTTGAAGT------
------TCAAACCTGATCATTTCCCAGCACATCCGCACTGCTATTTTGATCAATCATCTGCAAGAGATAAATTCTGTGAT
AGCATTTTAAGCAACATTGTATATCTAACTAGTTGATGATGCCTATGGGCTGCAGAGCTTTGAAAGATCGAAAGGTGGGT
ACGAAAAGGACCCACTGATTACTATATAGGCTATCATCTTCTTTGCTGCTTCTGCCGTTCTCTTCTCCACATGCTCTCCG
CTCTTCACTACCTTACTGTTTCCACGACAAGCATGTTGATTGAAACAGTAAGTTCTGCCATCATATCCACAGGAAGCTCT
AGCCCCGT
>chr6D_617
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--------------------------------------------------------GGAATTCGTTTGAATGATAGAACC
ATGAAAAGTTACGGTGATGTTTCATGGGACGGCCATTCCTGCTACAGTCCTGTACTGTGATTGAGTTTGCCCTCGTAGCC
GGGTGGGCCA----------TCGAGACATGCAGGAGCTGCCAGTTGGCAGTCTTCCATTCGCCACCAGTCACTGCCCACG
GATCGCGATCCGCATGAGGCATGCAAAACTCAATCGGCACCCTTCACCGCTACTCCATCCGACGGCTCCCA--TCTCCCT
CCCCCGCGCCGGGCCGAATTCCGGATCCGCGCTCCGAGCACCAAATCCACCCGCCTCCTATTTATTCCCCCTCGTCTCCC
CTCCATTTCCACACCGCAAAGCAA-TCTTCTCTT---CACTTCAAAACACCCGAGCAAACCTCTCCGATCTCCCATCCCG
GCGCCCCCCGCTCCTCCCGCGATGGCCCGCACGAAGCAGACGGCGCGCAAGTCCACCGGCGGCAAGGCCCCGCGGAAGCA
GCTGGCGACCAAGGCGGCGCGCAAGTCGGCCCCGGCGACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCGGGCACCG
TCGCGCTGCGCGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTGGTCCGG
GAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCCGCCCTGCAGGAGGCCGCCGAGGCCTA
CCTCGTCGGCCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGC
TTGCCCGCCGCATCCGCGGGGAGCGCGCCTAGGCGCCTCGCTTGC--CATTGCTAGGTGTTTAGGA---TCTGTTCCCGT
CGTGTTCCATATCTGCGTCGTTCCTGTGTAACTAGCTTGTTGCTGTGCTTCGATGCTT--------TCAATGAAATATGG
TTACCAGTATGAGATAAA-TCCCTCTGAATTATTATT---CTCTTTTTTCTGTGCTTGTCTTCACCCTCTGAATTACTGG
CTATAGTTGGTCTGTCAGGCGT-------TCTGAATGCATGTTTTGAATGGACCTGG-------TTAAAATTGCGGCTGG
TATTGGTGATTTCTGTCTGTGATGGTACCATTTTTATTTAAGAATGTGGTGGATTTGCATTAAAGCTTGTGACAAAAAAA
TCAACCGCAGAGCCTGTGAATGAGCAG---TAATTTATTTGCAGTTTGGCGTGAATGCTGTGATTAAATCGTCTGACAAC
AGCCGTGACAAAAATATTGTTAGCTTCAAACCTCATCTCCTATAAGCCTACAAAGAGAAGCATGATACTCACTATTCTTT
CGCAGTTTTGCTACAATTG-TATTTTGTCTTATATTGTAAAGGGTAATTAGTTCTTAGATTGCGGTGGAAGT----TGTT
TATACTCTATTTTCAGAATACATCTTCATCTTGTGAAAATTTACTTAGCCTGAATATTAGGCTA--TGAATCCAAGATTG
AGGTTGAAATATGGTCCGCTGTACTACTTCTGGTTTGTGCTTGCTGTTTACCATGTAAATTCATTGATGCAATTTATGAA
TATGGATCAACATCAAGGCCACAAAAATTGTTGAACCAACTGCGGTTCTTGTGAGTGAGTAGTTGGAATGTGTTTGCAGG
AACTGCAATTCGTTCATTTGGGAATTGGGAGTGAACTGTGATCCGGAGTCTGAACTCTCATCATATATTCAATCAAACCT
GATCAATCAAACCTGATCATTTCCCAGCACATCCGCGCTGCTATTTTGATCAATCATCTGCAAGAGATAAATCCCGTGAT
AGCATTTTAAGCAACATTGTATATCTAACTAGTTGATGATGCCTATGGGCTGCAGAGCTTTGAAAGATCGAAAGGTGGGT
ACGAAAAGGACCCACTGATTACTTTAGAGGCTATCATCTTCTTTGCTGCTTCTGCTGTTCTCTTCTCCACATGCTCTCCG
CTCTTCACTACCTTGCTGTTTCCACGACAAGCATCTTGATTGAAAATGTAAGTTCTGCCATCATATCCACAGGAAGCTCT
AGTCCCGT
>chr6B_738
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----------------------GAGATGTGAAAGAGTTGCCAGATGGCAGCCTTCCATTCGTCACCATTCACGACCCACG
GATCGCGATCCGCGTGACGCCTGGAAAAATCGATCGGCACCCTTCACTCATACGCCATCCGACGGCTCCCACCTCCCCTC
CCCCCACCCGCGGCCGAATTCCGGATCCGCGCTCCGAGCACCAAATCCACCCGCCTCCTATTTATTCCCCCT-GTCTCCC
CTCCATTTCCACATCGCAAAGCAAATCTCCCCCGCTCCACTTCAAAACACCCGAGCAAACCTCTCCGATCTCCCATCCCA
GCGCCCCC-GCTCCTCCCCCGATGGCCCGTACGAAGCAGACGGCGCGCAAGTCCACCGGCGGCAAGGCCCCGTGGAAGCA
GCTGGCGACCAAGGCGGCGCGCAAGTCGGCCCCCGCCACCGGCGGCGTGAAGAAGCCGCACCGCTTCCGCCCGGGCACCG
TCGCGCTGCGCGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGCTCCCCTTCCAGCGCCTGGTCCGT
GAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGAGCTCCGCCGTCTCTGCCCTGCAGGAGGCCGCCGAGGCCTA
CCTCATCGGCCTCTTCGAGGACACCAACCTCTGCGCCATCCATGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGC
TCGCCCGCCGCATCCGCGGGGAGCGCGCCTAGGCGCCTCGCTTGT--CGTTGCTAGGTGTTTTAGATTCTCTGTTCCCGT
CGTGTTCTATGTGTGCGTCGTTCCTATGTAACTGGCTTGTAGCTGTGCTTCGATGTACTGCTTATATCAATGAAATATGG
CTACCAGGATGAGATAAA-TCCCTCTGA---ATTGTTACCCTCCTTTTTCTGTGCTTGTCTCCACCTTCTGAATTACT--
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S-S---S--
-----------SS-SS----SS--------------S------------------------------S----S-------
-S---S--SSSSSSSSSSSS-------------S-------------------S----------S-----S-S-------
--------------S-------S----------------------------------------------SSS--------
-------------------------------------------------S------------------------------
---------------------------------------------------------S----------------------
--------S--S--S-----------------------------------------------------------------
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-S--------------------------------------------------------S--------------------S
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------------------------------------------S--SS--S---------------SS--S----------
--------------------S--------------------------------------S--------S-----------
------------------S--------------------------S----------------------------------
--------S-------------SSSSSSS-----------S---S-------S--SSSSSSSSS----------------
-S-S------------S--S-S---S-SS-S-S--SSSS-----------------------------------------
--------------------S---S--SSS----------------------SS---S------------SSSSSSSS--
-----------------------------------SS-----------------------------------S-------
S-SSSSSS--SSSS-SSSSS------------S--------------S---------------S---S----SSSS--S-
-------------------------------------SS---------S--------------SSS--------------
-----------S----S----S-S-S--------------------S---------SSS--SS--SSSS---S-------
-------S----------------------------------------------S-------S-----------------
--------------------------------------------------------S------SSSS--S--SS------
------------------------------------S-----------------------------------S-S-----
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-----------------------S--S----------------------------S------------------------
--------------S-------------------S----------SS---------------------------------
--S-----
>forward_316
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--------------------------------------------------------ACGTTTTGCGGAGTCTGCTA----
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>reverse_2186
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-------------------------GCTTCTGGTTTGTGCTTGCT-----------------------------------
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