>input_sequence_73779
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---------------------------------------------------GCCACCCACCAAGGAAAGGAGGATGTCTT
GCTGCGGCGGCAACTGCGGGTGCGGCGCCGGCTGCAAGTGCGGCAACGGCTGCGGCGGGTACGTGCTGTGCTGTGCTACG
TACAGAAGGACGCCTGAGCTAAACTAACGTTTCAGAGTAGGTACTGA-------TTTGCATGTGTGCGTTT---ACGTAG
GTGCAAGATGTTCCCCGACGTGGAGGCCACCGCCGGCGCCGCCGCCATGGTCATGCCCACCGCCTCCCACAAGGGGTACG
TATCG----CGCCAACTAATTAACCGCGCT---TGTTCAACTGAGAACATGCAT--ATGGATCTCTGACTGACT------
------------GGTGGATGGACTGGCCTGACTCTGCTTGTGCAGGAGCTCCGGCGGGTTCGAGACGGCCGG---GGAGA
CCGGCGGCTGCGACTGCACCACCTGCAAGTGCGGCACCGCGTGCGGCTGCTCCTGCTGCAGCTGCAACTGAGCCGGCGCC
CAGGAGGCCGGCCGGCAGAGGCGAGCACGAGGATGAGGAGGACAAG----CAAGCAAGCACCATCACCACCAGTTCACCA
CCACCCAGCGTATCATCACCAGCCGCCGCATGCGCTCGCGCGCGCGCGCGCTGAATAAAATAAAACCACCGTTCGTGT--
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>chr1D_1_TraesCS1D01G034800
GCAGAATAAATCCCGTAAAATATTTTATGGTACTGATAAATTCCATAAGAGTAACGCTACACGTACAAAAGAGTTACAAG
GTTTTGCAAAGAGAGTTAATTTGATTGGTCAATAGGTGAGGAACACGGTTCACCCCCCTGAAAATCAGGGGGGGGGGCAA
GTTTGTGATTGGTTACTAGATGAAAAGAGCCTGTAAAATCCTGTAATCTTTTGTACGTCTAGCATTTTTGATTCCATAAA
CCCCCTAAAAAGCGTCCGTTAAATTATAATTGAATCCGCGCGTTTTGTCGGTGACAGCGCCGCCGTGGAGCAAGACGAGG
ACCACGGGGACGGAGACGACGAGCGGCTAGCTCGCGGCGGCTAGCTAGCTAGCTTGCGGTGGCGATAGCTGTAGCAGTAG
CTCACGAGCGACGGTAGCGGATGAGGGATCCTATAAAACATGGCGAAATCCCATAGATACAGAGAAATCGGGCTCGCGGA
TGAGGGATCTCACAAAAAGAATATTGCACAGTCAAATTTGAAGTAGCCCAACGGTTATTATAGCGGACGGTCCGGTTCGA
GAGATCTGCGAGAGATGCTCTCGGTACTACTCGGTGCGTGCCGCTCGTGCTACTGATGTAGGGTGGCGCTCATCGTGCGT
GCATGTTAGTGTGGCGTCGATCGAGTGCGCTCAGCGGCCGTCTACGTCTATTTCCAGTGGTATTTCTCTCGCACTTTATT
TACCTATACAGTGATGGAATCGGAGGCGGGCAGAAAGAGAAGGCGCATGCGTACCGCCGGCGTCTACT---GCTGCTACG
ACGTCGAC--CGACGTTGATGATGATTCCTCTTCCCGATTAAAGTTGGCGCGGTGGGGCAGCGCGCGCTCCCCGCCATCC
TTTGCCGCCCCGCGCCCGGCCTATTTATAGGCCCCCTCCTCGCCTTCTTCCTCCTCACCAAGCAAGCACACCAGCCTCCT
CAGTCCTCACAG------CATCCTCTCAGTCCTTAGCTTCCTTCCCTCGCCGCCACCCACCAAGGAAAGGAGGATGTCTT
GCTGCGGCGGCAACTGCGGGTGCGGCGCCGGCTGCAAGTGCGGCAACGGCTGCGGCGGGTACGTGCTGTGCTGTGCTACG
TACAGAAGGACGCCTGAGCTAAACTAACGTTTCAGAGTAGGTACTGA-------TTTGCATGTGTGCGTTT---ACGTAG
GTGCAAGATGTTCCCCGACGTGGAGGCCACCGCCGGCGCCGCCGCCATGGTCATGCCCACCGCCTCCCACAAGGGGTACG
TATCG----CGCCAACTAATTAACCGCGCT---TGTTCAACTGAGAACATGCAT--ATGGATCTCTGACTGACT------
------------GGTGGATGGACTGGCCTGACTCTGCTTGTGCAGGAGCTCCGGCGGGTTCGAGACGGCCGG---GGAGA
CCGGCGGCTGCGACTGCACCACCTGCAAGTGCGGCACCGCGTGCGGCTGCTCCTGCTGCAGCTGCAACTGAGCCGGCGCC
CAGGAGGCCGGCCGGCAGAGGCGAGCACGAGGATGAGGAGGACAAG----CAAGCAAGCACCATCACCACCAGTTCACCA
CCACCCAGCGTATCATCACCAGCCGCCGCATGCGCTCGCGCGCGCGCGCGCTGAATAAAATAAAACCACCGTTCGTGTTC
CGTAGTTCTGTATGCCCCTGTCGCGTGTGTTCGACCAGTACTGTCCTTCCTCATGCCTCCACTTCTAATGAATATATGGC
GCCTCAACTTTGAATGATCTTTGTCTCTGTTCTCCAACTGTTTCTCAATCTGAACGCCTCTGCTAAGAACTTAATTACTG
ATCACTACGCAAGTTAAGGAAACTGCTGGCAAAAGAATGTGCAAATAAACAGGAAATGGAAAATCAGTTAGCTCCTCTGA
TCCAGCGATCCTGATCGATACGAATGTACAAACGAACGGATCTGGTTTGTGGGAGGAGTTCTTGCATGTTAATTGTTGGC
TACCTGGAGATCGATCTCTTCGCTTGTTCAACCTTGATGAACTCTGAATGAACGGCAAGAACGAACGGATTGCATGCAGA
AGAGATGACGAGAGAACGCTGTGCCGAACAGCCGGTTGTGTACAGTTGCGATGCACGACGATCATGATCATGGTGGTGAC
TAGGCGCTAGGAGCTAGGAGTGCGTGCAGTGCGGCGAGGACAAGTTAGCTGAGTCAGCGACGATTGGGATAAGGACATGG
GCACGGGCGGTGGCGAGGGCGACGCCTCTCTAGCTAGGCCGAGGTACGTAGAGGTCACATGCAGTGTCGCACTCGCACGG
CTACCTAACTCGGAGAACAGACAAAACACCAACGGAGAGTCTCATTGAGAGAGCTTTCTTTCCTTCCTAATCATCCGACG
GACGGACGTGCACGAGCACCACGGCCTCCCTCGACCCATCGATTGTTGTGCAGAATTTCTTTCTTGACAAACCCTTTTGT
TTTGGGTAATGTTACCCGGCTGACGTTCGCCTGGGGGAGGGTGGCAAGCGAACACCGACGACAGTTTAAGCTGTGAAGAA
ATATCAAACGACAGCACGGAAAATGCCTTCTCTCGAGAAACTGCCGTGTCGCTTTGAAGAAACCGCCATCCCTGCACAAC
TAAAAATGCCATCTAGAATGTTCGCAAATGCCACCCTC
>chr1B_745
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------------------------GGCGGGCAGAAAGGGAAGGCGCATGCGTGCCGCCGGCGTCTACTGCCGCTGCTACG
ACGTCGACGTCGACGTTGATGATGATTCCTCTTCCCGATTAAAGCTGGCGCGGTGGGGCACCGCGCGCTCCCCTCCATCC
TTTGCCGCCCCCCGCCCCGCCTATTTATAGGCCCCCTCCTCGCCTTCTTCCTCCACACCC--CAAGCACACCAGCCTCCT
CACTCCTCACAGTCGCAGCATCCTCTCAGTCCTCACCTTCCTCCCCTCGCCACCACCCACCAAGGAAAGGAGGATGTCTT
GCTGCGGCGGCAACTGCGGATGCGGCGCCGGCTGCAAGTGCGGCAACGGCTGCGGCGGGTAAACATCTTGAACCAAACTG
GACGTGTGTGGGTG-------AATTAACGTTTCAGACTAGGTACTGACTCGCCGTTTGCATGTGTACCTGTGCAACGTAG
GTGCAAGATGTTCCCCGACGTTGAGGCCACCGCCGGCGCCGCCGCCATGGTCATGCCCACCGCCTCCCACAAGGGGTACG
TATCGTACGCGCTGACTGATTAATCAGCTCTTCTGTTTAACTGAGAACGTGCATGCATGGATCTCTGACTGACTGACTGA
CTGACTGGTGGTGGTGGATGGACCGACCTGGTTGTGATTGTGCAGGAGCTCCGGCGGGTTCGAGACGGCCGGCGGGGAGA
CCGGCGGCTGCGACTGCACCACCTGCAAGTGCGGCACGGCCTGCGGCTGCTCCTGCTGCAGCTGCAACTGAGCCGGCGCC
CAGGAGGCCGGCCGGC-GAGGCGAGCACGAGGATGAGGAGGACAACTGGACAAGCAACCACCACCACCACCACCAC----
-------------CATCACTAGCCGCTGCATGCGCCCGCCCGCGCGCGCGCTGAATAAAATAAAACCGTCGT--GTGTTC
CTTAACTCTGTACCTGTACGCC-CGTGTTTTCCACCAGCAGTGTCCTTGCTCATGCCTCCAACTCTAAT-----------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS-------------S--------------S---------------------------
--------------------------------------------S---------------S------------S------
-----------S-----S------------------------------------S----SSS------------------
--S------------------------------S-S------S--------S----------------------------
-------------------S-----------------------------------------SSSSSSS--SSSSSSSSS-
S--SSSS-SSS-SSSSSSSSS--S------------S----------------------------S-S-S----------
---------------------S----------------------------------------------------------
------------SS---S-----S-SSSSS-------S----------S-------------------------------
-----------------------S-S----SS-S--S-------------------------------------------
-------------------------------------S--S---------------------------------------
----------------S----------------------------S-----------S-----S--------SSS-SSSS
SSSSSSSSSSSSS------S------S--------S---S---------------------------SS---SS------
-S--SS------SSSSSSS-S-S-----S---S-----S-S-------S------------SS------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_665
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-----TTAGTGTGGCGTCGATCGAG-------------------------------------------------------
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>reverse_2488
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-------AATGTTACCCGGCTGACGTT-----------------------------------------------------
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