>input_sequence_73753
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-------------------------------ATGCGGCGGGGCGGCGGCGCTGCGACGGCCGTTGCGGCTGCGGCGGAGG
CGGAGCGGGACGCGGGAGCACGGTTCCGCGGCGTGCGGAAGCGTCCGTGGGGCCGGTACGCGGCGGAGATCCGCGACCCG
GCCAAGAAGGCGCGGGTATGGCTCGGCACCTTCGACTCCGCCGAGGACGCCGCCCGCGCCTACGACGCCGCCGCGCGCAT
GCTGCGCGGGCCCAAGGCCAAGACCAACTTCCCCCTCTCCCTTCCCCATCACCACCAACTACAGGCCAGCTACTCGCCCT
ACCCCGTCGCCGCCGCCGCCGCTGTCCCGACGTCGGTCGCCGCGGCGGCGGCCAGGCCAGCCTGCAGCAGCCTGAGCTCC
ACCGTCGAGTCCTTCGGCGGCCCGCGGGCGCGGCCGGTGCTCCCACCGCGGCCTCCGCCGCCGCCGATCCTCGACGGTGA
CTGCCATAGCGACTGCGGGTCCTCGGCCTCGGTGGTGGACGACGATTGCGCGGACGCCGCCGCCTCGCCGTCCTGCGGTC
TCCTGCTCCCGTTCGACCTCAACCTGCCCCCGGAGTTTGGCGGCGTTGCATGTAACGACGACGACGAGCTGAAGCTGACG
GCGCTGCGGCTCTGA-----------------------------------------------------------------
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>chr6D_1_TraesCS6D01G161300
CGGTGCTTCATAATTATTTGTGATGTCAAGGGCACTCAACCGCACACAAAGTGGCAATAACACCACAACAAACATTATAA
CTTCTGCTATCCGAAAGAGAATGCACAAATAACTCGTAAATTATCCCTGGCGCTAAACCAAAGATAAACGTTGCACGTCA
GAATACGAAGATCACGCATGTTGATAGCGAGGTGGCATTTAGGTTGCACGTAAGAATATAGTAGGGGTCCTATGTGGCCG
TTCATGGTAAATGAGATGGTGGAGACCGGAGAGTCCTGATGTGTGAGCTTTAAGAATGAATCATTTGTTACAATGTTTGC
AATGATGAGAAAGATACAAGGCATAGAGGATCATCCTGTCTCATCACATGACGTCAAGATGTCAAATAGCCCGAGACGCT
ATTCAAATGCCTATTAAAGACAAATCCTATCACGTCACAAAGATAGGAGAGTCAAATTTAACTTTGGCATTTAGAGGGCT
AATTCGGATGATTTTCGTGCCAAAAACACGGTACTATGCATCACATAGTGCTT-------AACCTTTTTTTTTGAGGGGT
ACATATATTGCTT-------------------------------------------------------------------
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----------------------------------AAGCAAGGAAACAAATCT-----TCAAAGAAATAAAAGGGAAGTTT
ATAAAAAGAGGGAAGAAAAGAAAAGGCCCAAAAGCAGCCCATAGAGGCATTGACACAGCCGTTTGAAACGAAAGAGAAAA
GTCGGAAGAAGAAA--------AAGAAAAGGCGAAAC--CTCCCGCGAGACCGAGAAGAAAAAGCCGGCAGGGCGGGC--
--------TGGTGGTGGTGGTGGGAGGCGCGCGCGGGTGGGGTGGGCGTCGTGGGCGGTGGCAGCACAAACAAGCAAACC
TTCCAATTTACTCCTCCCCACCTTCCCATCCTCCTCCTCCTCCT------TCCCCCCTTCCCCAAATCTCAAAATTCCCG
ATTCCCGTTCCGA----CCCTCCTGCGCCGTACCAAAGCTCACGAGCACACGCCACGTGATTCCGATCCTGCTAGAGGAA
TCCCGAGGCTCGGCTTT--------GCCGGCATGCGGCGGGGCGGCGGCGCTGCGACGGCCGTTGCGGCTGCGGCGGAGG
CGGAGCGGGACGCGGGAGCACGGTTCCGCGGCGTGCGGAAGCGTCCGTGGGGCCGGTACGCGGCGGAGATCCGCGACCCG
GCCAAGAAGGCGCGGGTATGGCTCGGCACCTTCGACTCCGCCGAGGACGCCGCCCGCGCCTACGACGCCGCCGCGCGCAT
GCTGCGCGGGCCCAAGGCCAAGACCAACTTCCCCCTCTCCCTTCCCCATCACCACCAACTACAGGCCAGCTACTCGCCCT
ACCCCGTCGCCGCCGCCGCCGCTGTCCCGACGTCGGTCGCCGCGGCGGCGGCCAGGCCAGCCTGCAGCAGCCTGAGCTCC
ACCGTCGAGTCCTTCGGCGGCCCGCGGGCGCGGCCGGTGCTCCCACCGCGGCCTCCGCCGCCGCCGATCCTCGACGGTGA
CTGCCATAGCGACTGCGGGTCCTCGGCCTCGGTGGTGGACGACGATTGCGCGGACGCCGCCGCCTCGCCGTCCTGCGGTC
TCCTGCTCCCGTTCGACCTCAACCTGCCCCCGGAGTTTGGCGGCGTTGCATGTAACGACGACGACGAGCTGAAGCTGACG
GCGCTGCGGCTCTGAAGTCAGAACCACCGGCTGGTGGTTAGAGAAAAAGGATAAGGAGAAAAATATTTGGTTCTTCCCTT
CTCTCCATAGCCAGCACGATCCACCTCCACGCTGTTGTTGCTGTTGCTGTTTACATGATCTGATGATGATTAATATGGCC
TGATCTACCAATCGGCCTGCTTGTTGCCGCTGGTAGCGGTGATTATTGCCGACTACCGCCGGCAGCTCGCTGTGGTTGTT
GTAATATAGCAACGTTTTACTTGCTTCCTCTTGTGAGGAAGTAGACACCTAAAGTAACTTATTTTCTT-TTTAGCCACAT
GTGTTACTGTTACTCATTTAGGCTCATTTGTTTCGAATTGAGAACAATGGAAAACAAAGTTTTGTTTATGAGAATGGTAC
TGGGTGCTTAAATGCTAGAAAATTCGAGCTAAAGGTTGTTGTGTTAGAGGGATGACCTTGATCTTAATTTCAACCCTGGT
ACAACCTTCTACCTGAATACCCCCATTATTCTTCGAGTACTGTAAATAGACTAACCTTACCATGGTTCTCATAATGCTTA
TGTTGCTAACATGTGATTTCTTCTGACATGTAGTTTTGGTTCTTAAATCAAGTCTCACACTGATGTAGATGTCTGTCAGA
A---AAAGAGAAGTTTACTTTGGCTGCTCAAGATGATGGGATGTTTGTCCTATTCTAATTCATATAAAGTAAGTTCACAA
ACTAATTTGTTGTGGACACCTTCAGCTATGATTAATGCCTTTGGCATAATTTATGCCGAATCATTAGCTTGTATAATTGG
GCATACTCATGAGCTGAAATCAACAGACAACACAACTGATCATGATGACACAAGATGCTAACAAGATTAGTTCTGATAAT
TAGCAAAGT--TATGCTAACAGCAAACTATGATGGAGTAACATGAAAGTAAAAGGATTTTGAATATACTCTTGTATCAGT
AGATTTTTCGTTTCTGTTTGATGTATGCTAACGAGATTATATTTGATTGCTTTACTGGTTG
>chr6B_4
---TGCTTCGTAATTATTTGTGGTGTCAAGCGCACTCAACCGCACACAAAGTGGCAATAACACCACAACAAACATTATAA
CTTGTGCTACCCGAAAGAGCATGCACAAATAACTCGTAAATTATCCCTGGTGCTAAACCAAAGATAAACGTTGCACGTAA
GAATATGAAGATCATGCATGTTGATAGCGAGGTGGCATTTAGGTTGCACGTAAGAATATAGTAGGGTCC-TAGGTGGCCG
TTCATGGTAATTGAGAAGGTGGAGATCGGAGAGTCCAGATGTGTGAGCTTTAAGAATGAATCATTTGTTACAATGTTTGC
AATGATGAGGAAGATACAAGGCATAGAGGATCATCCTATCTCATCACATCACGTCAAGATGTCAAATAGCCCCAGATGCT
ATTCAAATGCCTATTAAAGACAAATCCTATCACGCCACAAAGATAGGAGAGCCAAATTTAACTTTAGCATTTAGGCAGCT
AATTCGGACGAATTTCGTGCTAAAAACACGGTACTATGCATCACATATTGCTT-------ATCC-TTTTTTTTGAGGGGT
ACATATATTGCTTTTTTAGGGAAATGTCATCATGGCGGTCTATATTTCATGTGAGAATAAAGATACATCGTTTGTTAAAA
CATCCACTAAGAAACCCGGGGGCTCCGATTTCCAAACAATTGTTCAAGACACCTCCGAGTTCTTAGCTAGCAGTTCTGCC
GCCATATTGGCTTCTCGAGGGCAATGGCTAAAAACTACAGAGATAAAATTGCTAGATAAGAAAGTGCATTCTTCATATAT
TGCCGCTGCTGGTCCTGGTGAATTCCCACCACTCAGCATGATCTCGATTACCTCCAAACAGTCCGCTTCAACATAAAGTT
TGTTCCAACCAACTTCATTCGCTAGTAGGAGGCCATCTCCTAGTCCTCTAGCATCTACCATCGTTGTGTCTTCCACAAAG
GGTATATATCACTGCAGGAAGCAGCGACAAAGAAACCGGCCTCATCACGCAGCACTGCTCCCGTACCCCCTGTACCAGTG
TCCTAATCAAATGCTGCATCGACATTAAGTTTGAGGACGCCCTTAGGCGGTTTGGACCAGCCATGTCTTTTAATTTTAGT
TTGCTTCAACCTTGCTCGTGAAAAGTTCTGCGCTAAAGTTGATATAGCTTGGGCCGACCTGGCCGACTCATAGATGTTCT
CACCGTGTGTGTATTTGCGTCGTTCCCACCATGCATACCAGATTGTTGTGGCCACTAGATCATTGCGCTGGACATCAGCC
ACCAGTGGACATATGGTACTTTTGGATAGTAGGAGATCGACCATCTCTCTCTACTGTGCTGATTTCATTCACTAGCTCCT
GTAGTCCAAGAATTCGCCAGATTTCCCGCACCCTCGGGCATAGAAACATGGCATGCCTAATGCTCTGACAGTCCGAACTA
CAAAGGGGAAACTGGGAGCTTGTAATCATATGTCTGTTCGCTAAAACACCACAACAAGGAATAGCTCCAAGCAAAGTCCT
CCAACACATGGATTTTGATTTTTGATGGCACACACAATTTCCAAACGGTACGCCAGACTGGACTAGTACTTGAGGCTTGT
AATGAGTTTGTCGCCCTCAACTTGTATATTGGTTAAGCAAGGAAACAAATCT-----TCAAAGAAATAAAAGGGAAGTTT
ATAAAAAGAGGGAA-AAAAGAAAAGGCCCAAAAGCAGCCCATAGAGGCATTGACACAGCCGTTTGAAACGAAAGAGAAAA
GTCGGAAGAAGAAAGAGGAGAAAAGAAAAGGCGAAAC--CTCCCGCGAGACCGAGAAGAAAAAGCCGGCAGGGCAGGCGG
GCTGGTGGTGGTGGTGGTGGTGGGAGGCGCGCGCGGGTGGGGTGGGCGTCGTGGGCGGTGGCAGCACAAACAAGCAAACC
TTCCAATTTACTCCTCCCCACCTTCCCATCCTCCTCCTCCTCCTCCTCCTTCCCCCCTTCCCCAAATCTCAAAATTCCCG
ATTCCCGTTCCGA-------------GCCATACCAAAGCTCACGAGCACACGCCACGTGATTCCGATCCTGCTAGAGGAA
TCCCGAGGCTCGGC-----------------ATGCGGCGGGGCGGCGGCGCTGCGACGGCCGTTGCGGCTGCGGCGGAGG
CGGAGGGGGACGCGGGGGCGCGGTTCCGCGGCGTGCGGAAGCGGCCGTGGGGCCGGTACGCGGCGGAGATCCGCGACCCG
GCCAAGAAGGCGCGGGTATGGCTCGGCACCTTCGACTCCGCCGAGGACGCCGCCCGCGCGTACGACGCCGCCGCGCGCAT
GCTGCGCGGGCCCAAGGCCAAGACCAACTTCCCCCTCTCCCTTCCCCATCACCACCAACTGCCGCCCAGCTACTCGCCCT
ACCCT---------GCCGCCGCTGTCCCGACGTCGGTCGCCGCGGCGGCGGCCAGGCCAGCCTGCAGCAGCCTGAGCTCC
ACCGTCGAGTCCTTCGGCGGGCCGCGGGCGCGGCCGGTGCTCCCGCCGCGGCCTCCGCCGCCGCCGATCCTCGACGGCGA
CTGCCATAGCGACTGCGGGTCCTCGGCCTCGGTGGTGGACGACGATTGCGCGGACGCCGCCGCCTCGCCGTCCTGCGGTG
CCCTGCTCCCGTTCGACCTCAACCTGCCCCCGGAGTTTGGCGGCGTTGCATGTAACGACGACGACGAGCTGAAGCTGACG
GCGCTGCGACTCTGAAGTCAGAACCACCCGGTGGTGGTTAGAGAAAAAGGATAAGGAGAAAAATATTTGGTTCTTCCCTT
CTCTCCATAGCCAGCACGATCCACC---ACGCTGTTGTTGCTGCTGCTCTTTACGTGATCTGATGATGATTAATGTGGCC
TGATCTACGAATCGGCCTGCTTGTTGCCGCTGGTAGCGGTGATTATTGCCGACTACCGCCGGCAGCTCGCTGTGGTTGTT
GTAATATAGCAACATTTTACTTGCTTCCTCTTGTGAGGAAGTAGACACCTAAAGTAACTTATTTTCTTTTTTAGCCACAT
GTGTTACTGTTACTCATTTAGGCTCATTTGTTTCGAATTGAGAACAAAGGAAAACAAAGTTTTGTTTATGAGAATGATAC
TGGGTGCTTAAATGCTAGAAAATTCGAGCTAAAAGTTGTTGTGTTAGAGGGATGACCTTGATCTTAATTTCAACCTTGGT
ACAACCTTCTACCTGAATACCCCCATTATTCTTCCAGTACTGTAAATAGACTAACCTTACCATGGTTCTCATAATGCTTA
TGTTGCTAACATGTGAATTATTCTTATATGTAGTTTTGGTTCTTAAATCAAGTCTCACACTGATGTAGATGTCTGTCATA
GAACAAAGAGAAGTTTACTTTGGCTGCTCAAGATGATGGGATGTTTGTCCTATTCTAATTCATATAAAGTAAGTTCACAA
ACTAATTTGTTGTGGACACCTTCAGCTATGATTAATGCATCCGGCATAATTTAGGCCGAATCATTAGCATGTATAATTGG
GCATACTCATGAGCTGAAATCAACAGACAAAACAACTGATCATGATGACACAAGATGCTAACAAGATTAGTTCTGACAAT
TAGCAAAGT--TATGCTAACAGCAAACTGTGATGGAGTAACATGAAAGTAAAAGGATTTTGAATATACTCTTGTATCAGT
AGATTTTTTGTTTCTGTTTGATGTATGATAACGAGATTATATTTGATTGCTTATTGGTTG-
>chr6A_5
----GCTTCATAATTATTTGTGGTGTCAAGTGCATTCAACCGCACACAAAGTGGCAATAACACCACAACAAAGATTATAA
TTTTAGCTATCAGAAAGAGCATGCATAGATAACTCAT-AATTATCCTTGGCGCTAAACCGAAGGTAAATGTTGCATGTAA
GAACACGAAGTTCATGCATGCTGATAGCGAGGCGGCATTTAGGTTGCACATAAGAATATAGTAGGATAG-TAGGTGACGG
TTCATGGTAAACGAGATGGTGAAGATCGGAGAGTCCTGATGTGTTGGCTTTAAGAATGAATCATTTG-TACAATGTTTGC
AATGATGAGGAAGAGACAAGGGATAGAGGATCATCCTGCCTCATCGCATTGCGCCG-GATATCAAATTGCCCGAGACGTT
GTTCAAACGCCTTTTAAAGACAAATCCTATCACGTCACAAGGATAGGAGAGTCAAATTTAACTTTGGCATTTAGGGAGCT
AATTTGGACGAATTTCGAGCCAAAAACACGAGACTATTCGTCAAATATTTGCTTATAGGAAACTTTATTTTTTGAGAAAC
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----------------------------------AACCAAGGAAACAAATCTTCAAATCAAAGAAATAAAAGGGAAGTTT
ATAAAAAGAGGGAAGAAAAGAAGAGGCCCAAAAGCAGCCCATAGAGGCATTGACACAGCCGTTTGAAATGAAAGGAAAAA
GTCGGAAGAAGAAAGAGGAGAAAAGAAAAGGCGAAACCTCTCCCGCGAGACCGAGAAGAAAAAGCCGGCAGGGCGGGC--
-----------TGGTGGTGGTGGGAGGCGCGCGCGGGTGGGGTGGGCGTCGTGGGCGGTGGCAGCACAAACAAGCAAACC
TTCCAATTTACTCCTCCCCACCTTCCCATCCTCCTCCACCTCCTC---CTTCCCCCCTTCCCCAAATCTCAAAATTCCCG
ATTCCCGTCTCAACGAGCCCTCCTGCGCCGTACCAAAGCTCACGAGCACACGCCACGTGATTCCGATCCCGCTAGAGGAA
TCCCGAGGCTCGGCTCGGCTCTGTCGCCGGCATGCGGCGGGGCGGCGGCGCTGCGACGGCCGTTGCGGCTGCGGCGGAGG
CGGAGGGGGACGCGGGGGCGCGGTTCCGCGGCGTGCGGAAGCGGCCGTGGGGCCGGTACGCGGCGGAGATCCGCGACCCG
GCCAAGAAGGCGCGGGTATGGCTCGGCACCTTCGACTCCGCCGAGGACGCCGCCCGCGCCTACGACGCCGCTGCGCGCAT
GCTGCGCGGGCCCAAGGCCAAGACCAACTTCCCCCTCTCCCTTCCCCACCACCGCCAACTGCCGCCCAGCTACTCGCCCT
ACCCCGTCGCCGCCGCCGCCGCTGTCCCGACGTCGGTCGCCGCGGCGGCGGCCAGGCCAGCCTGCAGCAGCCTGAGCTCC
ACCGTCGAGTCCTTCGGCGGCCCGCGGGCGCGGCCGGTGCTCCCGCCGCGGCCTCCGCCGCCGCCGATCCTCGACGGCGA
CTGCCATAGCGACTGCGGGTCCTCGGCCTCGGTGGTGGACGACGACTGCGCGGACGCCGCCGCCTCGCCGTCCTGCGGTC
TCCTGCTCCCGTTCGACCTCAACCTGCCCCCGGAGTTTGGCGGCGTTGCATGTAACGACGACGACGAGCTGAAGCTGACG
GCGCTGCGGCTCTGAAGTCAGAACCACCCGGTGGTGGTTAGAGAAAAAGGATAAGGAGAAAAATATTTGGTTCTTCCCTT
CTCTCCATAGCCAGCACGATCCACCTCCACGCTGTTGTTGCTGTTGCTGTTTACGTGATCTGATGATGATTAATATGGCC
TGATCTACGAATCGGCCTGCTTGTTGCCGCTGGTAGCGGTGATTATTGCCGACTACTGCCGGCAGCTCGCCGTGGTTGTT
GTAATATAGCAACATTTTACTTGCTTCCTCTTGTGTGGAAGTAGACACCTAAAGTAACTTATTTTCTTTTGTAGCCACAT
GTGTTACTGTTACTCATTTAGGCTCATTTGCTTCGAATTGAGAACAATGGAAAACAAAGTTTTGTTTATGAGAATGATAC
TGGGTGCTTAAATGCTAGAAAATTCGAGCTAAAAGTTGTTGTGTTAGAGGGATGACCTTGATCTTAATTTCAACCTTGGT
ACAACCTTCTACCTGAATACCCCCATTATTCTTCGAGTACTGTAAATAGACTAACCTTACTATGGTTCTCATAATGCTTA
TGTTGCTAACATGTGATTTATTCTGACATGTAGTTTTGGTTCTTAAATCAAGTCTCACACTGATGTAGATGTCTGTCATA
GAACGAAGAGAAGTTTACTTTGGCTGCTCAAGATGATGGGATGTTTGTCCTATTCTAATTCATATAAAGTAAGTTCACAA
ACTAATTTGTTGTGGACACCTTCAGCTATGATTAATGCATTTGGCATAATTTAGGCTGAATCATTAGCATGTATAATTGG
GCATACTCCTGAGCTGAAATCAACAGACAACACAACTGATCATGATGACACAAGATGCTAACAAGATTAGTTCTGACAAT
TAGCAAAGTTATATGCTAACAGCAAACTGTTATCGAGTAACATGAAAGTAAAAGGATTTTGAATATACTCTTGTATCCGT
AGATTTTTCGTTTCTGTTTGATGTATGCTAACGAGATTATATTCGATTGCTAATTGGTTG-
>SNPs
SSS-------------------S-------S-------------------------------------------------
---S---------------S----------------------------------------------------------S-
--------------S---------------------------------------------------SS-S--S-------
-------------------------S------------------------------------------------------
---------S---------------------------------------S------------------------------
--------------------------------------------------------------------------S-S---
--------S--S-----------------------------------S--------------------------------
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---------------SS---------------------------------------------------------------
-----S----------S--S-----------------------S------------------------------------
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------------------------------------------------------------S-S-S---------------
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--------------------------------------------S--------------------------------S--
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----------------------------S-S-------------------------------------------------
------------------------------------------------------S-------------------------
--------S-----------------------------------------------------------------------
-------------S------------------------------------------------------------------
----------------------------------------------------------------------------S---
---------------------------------S-----------------------------------------S----
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-------------------S----------------------------------------------------------S-
S-------------------------------------------------------------------------------
--------------------------------------S--------------S--------------S-----------
----------------------------------------------------------------------------S---
----------------------------S---------------------------------------------------
----------------------------------------------------SSSS-S-SS
>forward_175
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------------------------------------------------------------------------GCACGTCA
GAATACGAAGATCAC-----------------------------------------------------------------
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>reverse_2558
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-----------------------------------------------------------------------------TGA
CTGCCATAGCGACTGC----------------------------------------------------------------
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>forward_2383
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-------------------------------------------CCCCATCACCACCAACTACA-----------------
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>reverse_3196
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---------------------------------------------------------------------------CTGGT
ACAACCTTCTACCTGAA---------------------------------------------------------------
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