>input_sequence_73746
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-----------------ATGCGGCGGGGCGGCGGCGCTGCGACGGCCGTTGCGGCTGCGGCGGAGGCGGAGGGGGACGCG
GGGGCGCGGTTCCGCGGCGTGCGGAAGCGGCCGTGGGGCCGGTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGGCGCG
GGTATGGCTCGGCACCTTCGACTCCGCCGAGGACGCCGCCCGCGCCTACGACGCCGCTGCGCGCATGCTGCGCGGGCCCA
AGGCCAAGACCAACTTCCCCCTCTCCCTTCCCCACCACCGCCAACTGCCGCCCAGCTACTCGCCCTACCCCGTCGCCGCC
GCCGCCGCTGTCCCGACGTCGGTCGCCGCGGCGGCGGCCAGGCCAGCCTGCAGCAGCCTGAGCTCCACCGTCGAGTCCTT
CGGCGGCCCGCGGGCGCGGCCGGTGCTCCCGCCGCGGCCTCCGCCGCCGCCGATCCTCGACGGCGACTGCCATAGCGACT
GCGGGTCCTCGGCCTCGGTGGTGGACGACGACTGCGCGGACGCCGCCGCCTCGCCGTCCTGCGGTCTCCTGCTCCCGTTC
GACCTCAACCTGCCCCCGGAGTTTGGCGGCGTTGCATGTAACGACGACGACGAGCTGAAGCTGACGGCGCTGCGGCTCTG
A-------------------------------------------------------------------------------
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>chr6A_1_TraesCS6A01G171900
TTGTGGTGTCAAGTGCATTCAACCGCACACAAAGTGGCAATAACACCACAACAAAGATTATAATTTTAGCTATCAGAAAG
AGCATGCATAGATAACTCAT-AATTATCCTTGGCGCTAAACCGAAGGTAAATGTTGCATGTAAGAACACGAAGTTCATGC
ATGCTGATAGCGAGGCGGCATTTAGGTTGCACATAAGAATATAGTAGGATAG-TAGGTGACGGTTCATGGTAAACGAGAT
GGTGAAGATCGGAGAGTCCTGATGTGTTGGCTTTAAGAATGAATCATTTG-TACAATGTTTGCAATGATGAGGAAGAGAC
AAGGGATAGAGGATCATCCTGCCTCATCGCATTGCGCCG-GATATCAAATTGCCCGAGACGTTGTTCAAACGCCTTTTAA
AGACAAATCCTATCACGTCACAAGGATAGGAGAGTCAAATTTAACTTTGGCATTTAGGGAGCTAATTTGGACGAATTTCG
AGCCAAAAACACGAGACTATTCGTCAAATATTTGCTTATAGGAAACTTTATTTTTTGAGAAAC-----------------
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-----------------AACCAAGGAAACAAATCTTCAAATCAAAGAAATAAAAGGGAAGTTTATAAAAAGAGGGAAGAA
AAGAAGAGGCCCAAAAGCAGCCCATAGAGGCATTGACACAGCCGTTTGAAATGAAAGGAAAAAGTCGGAAGAAGAAAGAG
GAGAAAAGAAAAGGCGAAACCTCTCCCGCGAGACCGAGAAGAAAAAGCCGGCAGGGCGGGC----------TGGT---GG
TGGTGGGAGGCGCGCGCGGGTGGGGTGGGCGTCGTGGGCGGTGGCAGCACAAACAAGCAAACCTTCCAATTTACTCCTCC
CCACCTTCCCATCCTCCTCCACCTCCTCCT------TCCCCCCTTCCCCAAATCTCAAAATTCCCGATTCCCGTCTCAAC
GAGCCCTCCTGCGCCGTACCAAAGCTCACGAGCACACGCCACGTGATTCCGATCCCGCTAGAGGAATCCCGAGGCTCGGC
TCGGCTCTGTCGCCGGCATGCGGCGGGGCGGCGGCGCTGCGACGGCCGTTGCGGCTGCGGCGGAGGCGGAGGGGGACGCG
GGGGCGCGGTTCCGCGGCGTGCGGAAGCGGCCGTGGGGCCGGTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGGCGCG
GGTATGGCTCGGCACCTTCGACTCCGCCGAGGACGCCGCCCGCGCCTACGACGCCGCTGCGCGCATGCTGCGCGGGCCCA
AGGCCAAGACCAACTTCCCCCTCTCCCTTCCCCACCACCGCCAACTGCCGCCCAGCTACTCGCCCTACCCCGTCGCCGCC
GCCGCCGCTGTCCCGACGTCGGTCGCCGCGGCGGCGGCCAGGCCAGCCTGCAGCAGCCTGAGCTCCACCGTCGAGTCCTT
CGGCGGCCCGCGGGCGCGGCCGGTGCTCCCGCCGCGGCCTCCGCCGCCGCCGATCCTCGACGGCGACTGCCATAGCGACT
GCGGGTCCTCGGCCTCGGTGGTGGACGACGACTGCGCGGACGCCGCCGCCTCGCCGTCCTGCGGTCTCCTGCTCCCGTTC
GACCTCAACCTGCCCCCGGAGTTTGGCGGCGTTGCATGTAACGACGACGACGAGCTGAAGCTGACGGCGCTGCGGCTCTG
AAGTCAGAACCACCCGGTGGTGGTTAGAGAAAAAGGATAAGGAGAAAAATATTTGGTTCTTCCCTTCTCTCCATAGCCAG
CACGATCCACCTCCACGCTGTTGTTGCTGTTGCTGTTTACGTGATCTGATGATGATTAATATGGCCTGATCTACGAATCG
GCCTGCTTGTTGCCGCTGGTAGCGGTGATTATTGCCGACTACTGCCGGCAGCTCGCCGTGGTTGTTGTAATATAGCAACA
TTTTACTTGCTTCCTCTTGTGTGGAAGTAGACACCTAAAGTAACTTATTTTCTT-TTGTAGCCACATGTGTTACTGTTAC
TCATTTAGGCTCATTTGCTTCGAATTGAGAACAATGGAAAACAAAGTTTTGTTTATGAGAATGATACTGGGTGCTTAAAT
GCTAGAAAATTCGAGCTAAAAGTTGTTGTGTTAGAGGGATGACCTTGATCTTAATTTCAACCTTGGTACAACCTTCTACC
TGAATACCCCCATTATTCTTCGAGTACTGTAAATAGACTAACCTTACTATGGTTCTCATAATGCTTATGTTGCTAACATG
TGATTTATTCTGACATGTAGTTTTGGTTCTTAAATCAAGTCTCACACTGATGTAGATGTCTGTCATAGAACGAAGAGAAG
TTTACTTTGGCTGCTCAAGATGATGGGATGTTTGTCCTATTCTAATTCATATAAAGTAAGTTCACAAACTAATTTGTTGT
GGACACCTTCAGCTATGATTAATGCATTTGGCATAATTTAGGCTGAATCATTAGCATGTATAATTGGGCATACTCCTGAG
CTGAAATCAACAGACAACACAACTGATCATGATGACACAAGATGCTAACAAGATTAGTTCTGACAATTAGCAAAGTTATA
TGCTAACAGCAAACTGTTATCGAGTAACATGAAAGTAAAAGGATTTTGAATATACTCTTGTATCCGTAGATTTTTCGTTT
CTGTTTGATGTATGCTAACGAGATTATATTCGATTGCTAATT
>chr6D_1
TTGTGATGTCAAGGGCACTCAACCGCACACAAAGTGGCAATAACACCACAACAAACATTATAACTTCTGCTATCCGAAAG
AGAATGCACAAATAACTCGTAAATTATCCCTGGCGCTAAACCAAAGATAAACGTTGCACGTCAGAATACGAAGATCACGC
ATGTTGATAGCGAGGTGGCATTTAGGTTGCACGTAAGAATATAGTAGGGGTCCTATGTGGCCGTTCATGGTAAATGAGAT
GGTGGAGACCGGAGAGTCCTGATGTGTGAGCTTTAAGAATGAATCATTTGTTACAATGTTTGCAATGATGAGAAAGATAC
AAGGCATAGAGGATCATCCTGTCTCATCACATGACGTCAAGATGTCAAATAGCCCGAGACGCTATTCAAATGCCTATTAA
AGACAAATCCTATCACGTCACAAAGATAGGAGAGTCAAATTTAACTTTGGCATTTAGAGGGCTAATTCGGATGATTTTCG
TGCCAAAAACACGGTACTATGCATCACATAGTGCTT-------AACCTTTTTTTTTGAGGGGTACATATATTGCTT----
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-----------------AAGCAAGGAAACAAATCT-----TCAAAGAAATAAAAGGGAAGTTTATAAAAAGAGGGAAGAA
AAGAAAAGGCCCAAAAGCAGCCCATAGAGGCATTGACACAGCCGTTTGAAACGAAAGAGAAAAGTCGGAAGAAGAAA---
-----AAGAAAAGGCGAAAC--CTCCCGCGAGACCGAGAAGAAAAAGCCGGCAGGGCGGGC----------TGGTGGTGG
TGGTGGGAGGCGCGCGCGGGTGGGGTGGGCGTCGTGGGCGGTGGCAGCACAAACAAGCAAACCTTCCAATTTACTCCTCC
CCACCTTCCCATCCTCCTCCTCCTC---CT------TCCCCCCTTCCCCAAATCTCAAAATTCCCGATTCCCGTTCCGA-
---CCCTCCTGCGCCGTACCAAAGCTCACGAGCACACGCCACGTGATTCCGATCCTGCTAGAGGAATCCCGAGGCTCGGC
TTT--------GCCGGCATGCGGCGGGGCGGCGGCGCTGCGACGGCCGTTGCGGCTGCGGCGGAGGCGGAGCGGGACGCG
GGAGCACGGTTCCGCGGCGTGCGGAAGCGTCCGTGGGGCCGGTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGGCGCG
GGTATGGCTCGGCACCTTCGACTCCGCCGAGGACGCCGCCCGCGCCTACGACGCCGCCGCGCGCATGCTGCGCGGGCCCA
AGGCCAAGACCAACTTCCCCCTCTCCCTTCCCCATCACCACCAACTACAGGCCAGCTACTCGCCCTACCCCGTCGCCGCC
GCCGCCGCTGTCCCGACGTCGGTCGCCGCGGCGGCGGCCAGGCCAGCCTGCAGCAGCCTGAGCTCCACCGTCGAGTCCTT
CGGCGGCCCGCGGGCGCGGCCGGTGCTCCCACCGCGGCCTCCGCCGCCGCCGATCCTCGACGGTGACTGCCATAGCGACT
GCGGGTCCTCGGCCTCGGTGGTGGACGACGATTGCGCGGACGCCGCCGCCTCGCCGTCCTGCGGTCTCCTGCTCCCGTTC
GACCTCAACCTGCCCCCGGAGTTTGGCGGCGTTGCATGTAACGACGACGACGAGCTGAAGCTGACGGCGCTGCGGCTCTG
AAGTCAGAACCACCGGCTGGTGGTTAGAGAAAAAGGATAAGGAGAAAAATATTTGGTTCTTCCCTTCTCTCCATAGCCAG
CACGATCCACCTCCACGCTGTTGTTGCTGTTGCTGTTTACATGATCTGATGATGATTAATATGGCCTGATCTACCAATCG
GCCTGCTTGTTGCCGCTGGTAGCGGTGATTATTGCCGACTACCGCCGGCAGCTCGCTGTGGTTGTTGTAATATAGCAACG
TTTTACTTGCTTCCTCTTGTGAGGAAGTAGACACCTAAAGTAACTTATTTTCTT-TT-TAGCCACATGTGTTACTGTTAC
TCATTTAGGCTCATTTGTTTCGAATTGAGAACAATGGAAAACAAAGTTTTGTTTATGAGAATGGTACTGGGTGCTTAAAT
GCTAGAAAATTCGAGCTAAAGGTTGTTGTGTTAGAGGGATGACCTTGATCTTAATTTCAACCCTGGTACAACCTTCTACC
TGAATACCCCCATTATTCTTCGAGTACTGTAAATAGACTAACCTTACCATGGTTCTCATAATGCTTATGTTGCTAACATG
TGATTTCTTCTGACATGTAGTTTTGGTTCTTAAATCAAGTCTCACACTGATGTAGATGTCTGTCAGAA---AAAGAGAAG
TTTACTTTGGCTGCTCAAGATGATGGGATGTTTGTCCTATTCTAATTCATATAAAGTAAGTTCACAAACTAATTTGTTGT
GGACACCTTCAGCTATGATTAATGCCTTTGGCATAATTTATGCCGAATCATTAGCTTGTATAATTGGGCATACTCATGAG
CTGAAATCAACAGACAACACAACTGATCATGATGACACAAGATGCTAACAAGATTAGTTCTGATAATTAGCAAAGT--TA
TGCTAACAGCAAACTATGATGGAGTAACATGAAAGTAAAAGGATTTTGAATATACTCTTGTATCAGTAGATTTTTCGTTT
CTGTTTGATGTATGCTAACGAGATTATATTTGATTGCT----
>chr6B_1
TTGTGGTGTCAAGCGCACTCAACCGCACACAAAGTGGCAATAACACCACAACAAACATTATAACTTGTGCTACCCGAAAG
AGCATGCACAAATAACTCGTAAATTATCCCTGGTGCTAAACCAAAGATAAACGTTGCACGTAAGAATATGAAGATCATGC
ATGTTGATAGCGAGGTGGCATTTAGGTTGCACGTAAGAATATAGTAGG-GTCCTAGGTGGCCGTTCATGGTAATTGAGAA
GGTGGAGATCGGAGAGTCCAGATGTGTGAGCTTTAAGAATGAATCATTTGTTACAATGTTTGCAATGATGAGGAAGATAC
AAGGCATAGAGGATCATCCTATCTCATCACATCACGTCAAGATGTCAAATAGCCCCAGATGCTATTCAAATGCCTATTAA
AGACAAATCCTATCACGCCACAAAGATAGGAGAGCCAAATTTAACTTTAGCATTTAGGCAGCTAATTCGGACGAATTTCG
TGCTAAAAACACGGTACTATGCATCACATATTGCTTATCC--------TTTTTTTTGAGGGGTACATATATTGCTTTTTT
AGGGAAATGTCATCATGGCGGTCTATATTTCATGTGAGAATAAAGATACATCGTTTGTTAAAACATCCACTAAGAAACCC
GGGGGCTCCGATTTCCAAACAATTGTTCAAGACACCTCCGAGTTCTTAGCTAGCAGTTCTGCCGCCATATTGGCTTCTCG
AGGGCAATGGCTAAAAACTACAGAGATAAAATTGCTAGATAAGAAAGTGCATTCTTCATATATTGCCGCTGCTGGTCCTG
GTGAATTCCCACCACTCAGCATGATCTCGATTACCTCCAAACAGTCCGCTTCAACATAAAGTTTGTTCCAACCAACTTCA
TTCGCTAGTAGGAGGCCATCTCCTAGTCCTCTAGCATCTACCATCGTTGTGTCTTCCACAAAGGGTATATATCACTGCAG
GAAGCAGCGACAAAGAAACCGGCCTCATCACGCAGCACTGCTCCCGTACCCCCTGTACCAGTGTCCTAATCAAATGCTGC
ATCGACATTAAGTTTGAGGACGCCCTTAGGCGGTTTGGACCAGCCATGTCTTTTAATTTTAGTTTGCTTCAACCTTGCTC
GTGAAAAGTTCTGCGCTAAAGTTGATATAGCTTGGGCCGACCTGGCCGACTCATAGATGTTCTCACCGTGTGTGTATTTG
CGTCGTTCCCACCATGCATACCAGATTGTTGTGGCCACTAGATCATTGCGCTGGACATCAGCCACCAGTGGACATATGGT
ACTTTTGGATAGTAGGAGATCGACCATCTCTCTCTACTGTGCTGATTTCATTCACTAGCTCCTGTAGTCCAAGAATTCGC
CAGATTTCCCGCACCCTCGGGCATAGAAACATGGCATGCCTAATGCTCTGACAGTCCGAACTACAAAGGGGAAACTGGGA
GCTTGTAATCATATGTCTGTTCGCTAAAACACCACAACAAGGAATAGCTCCAAGCAAAGTCCTCCAACACATGGATTTTG
ATTTTTGATGGCACACACAATTTCCAAACGGTACGCCAGACTGGACTAGTACTTGAGGCTTGTAATGAGTTTGTCGCCCT
CAACTTGTATATTGGTTAAGCAAGGAAACAAATCT-----TCAAAGAAATAAAAGGGAAGTTTATAAAAAGAGGGAA-AA
AAGAAAAGGCCCAAAAGCAGCCCATAGAGGCATTGACACAGCCGTTTGAAACGAAAGAGAAAAGTCGGAAGAAGAAAGAG
GAGAAAAGAAAAGGCGAAAC--CTCCCGCGAGACCGAGAAGAAAAAGCCGGCAGGGCAGGCGGGCTGGTGGTGGTGGTGG
TGGTGGGAGGCGCGCGCGGGTGGGGTGGGCGTCGTGGGCGGTGGCAGCACAAACAAGCAAACCTTCCAATTTACTCCTCC
CCACCTTCCCATCCTCCTCCTCCTC---CTCCTCCTTCCCCCCTTCCCCAAATCTCAAAATTCCCGATTCCCGTTCCGA-
------------GCCATACCAAAGCTCACGAGCACACGCCACGTGATTCCGATCCTGCTAGAGGAATCCCGAGGCTCGGC
-----------------ATGCGGCGGGGCGGCGGCGCTGCGACGGCCGTTGCGGCTGCGGCGGAGGCGGAGGGGGACGCG
GGGGCGCGGTTCCGCGGCGTGCGGAAGCGGCCGTGGGGCCGGTACGCGGCGGAGATCCGCGACCCGGCCAAGAAGGCGCG
GGTATGGCTCGGCACCTTCGACTCCGCCGAGGACGCCGCCCGCGCGTACGACGCCGCCGCGCGCATGCTGCGCGGGCCCA
AGGCCAAGACCAACTTCCCCCTCTCCCTTCCCCATCACCACCAACTGCCGCCCAGCTACTCGCCCTACCCT---------
GCCGCCGCTGTCCCGACGTCGGTCGCCGCGGCGGCGGCCAGGCCAGCCTGCAGCAGCCTGAGCTCCACCGTCGAGTCCTT
CGGCGGGCCGCGGGCGCGGCCGGTGCTCCCGCCGCGGCCTCCGCCGCCGCCGATCCTCGACGGCGACTGCCATAGCGACT
GCGGGTCCTCGGCCTCGGTGGTGGACGACGATTGCGCGGACGCCGCCGCCTCGCCGTCCTGCGGTGCCCTGCTCCCGTTC
GACCTCAACCTGCCCCCGGAGTTTGGCGGCGTTGCATGTAACGACGACGACGAGCTGAAGCTGACGGCGCTGCGACTCTG
AAGTCAGAACCACCCGGTGGTGGTTAGAGAAAAAGGATAAGGAGAAAAATATTTGGTTCTTCCCTTCTCTCCATAGCCAG
CACGATCCACC---ACGCTGTTGTTGCTGCTGCTCTTTACGTGATCTGATGATGATTAATGTGGCCTGATCTACGAATCG
GCCTGCTTGTTGCCGCTGGTAGCGGTGATTATTGCCGACTACCGCCGGCAGCTCGCTGTGGTTGTTGTAATATAGCAACA
TTTTACTTGCTTCCTCTTGTGAGGAAGTAGACACCTAAAGTAACTTATTTTCTTTTT-TAGCCACATGTGTTACTGTTAC
TCATTTAGGCTCATTTGTTTCGAATTGAGAACAAAGGAAAACAAAGTTTTGTTTATGAGAATGATACTGGGTGCTTAAAT
GCTAGAAAATTCGAGCTAAAAGTTGTTGTGTTAGAGGGATGACCTTGATCTTAATTTCAACCTTGGTACAACCTTCTACC
TGAATACCCCCATTATTCTTCCAGTACTGTAAATAGACTAACCTTACCATGGTTCTCATAATGCTTATGTTGCTAACATG
TGAATTATTCTTATATGTAGTTTTGGTTCTTAAATCAAGTCTCACACTGATGTAGATGTCTGTCATAGAACAAAGAGAAG
TTTACTTTGGCTGCTCAAGATGATGGGATGTTTGTCCTATTCTAATTCATATAAAGTAAGTTCACAAACTAATTTGTTGT
GGACACCTTCAGCTATGATTAATGCATCCGGCATAATTTAGGCCGAATCATTAGCATGTATAATTGGGCATACTCATGAG
CTGAAATCAACAGACAAAACAACTGATCATGATGACACAAGATGCTAACAAGATTAGTTCTGACAATTAGCAAAGT--TA
TGCTAACAGCAAACTGTGATGGAGTAACATGAAAGTAAAAGGATTTTGAATATACTCTTGTATCAGTAGATTTTTTGTTT
CTGTTTGATGTATGATAACGAGATTATATTTGATTGCTTATT
>SNPs
-------------S---S-------------------------------------S-------S--SS------S-----
--------S-S-------S----------S------------S---S----S------S-------S------S------
---S-----------S----------------S---------------SSSS-------S-S------------S-----
----S----------------------SS------------------------------------------------S--
----S----------------S------S---SS--S-S----S------S----------S-S------S----S----
-----------------------S-------------------------------------------S------------
S------------SS-----S-S---S-----SSS-SSSSSSS---S--S---------SSSS-----------------
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-------------------S---------------SSSSS----------------------------------------
-----S---------------------------------------------S-----SS---------------------
--------------------SS----------------------------------------------------------
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--------------------S----SSS----------------------------------------------SS-S-S
SSS----------------------------------------------------S------------------------
-SSSSSSSSSS---------------------------------------------------------------------
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---------------------------------------------------------S----------------------
----------------------------------S----S----------------------------------------
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-------------------------------S------------------------------------------------
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------------------------------------------S-------------S-----------------------
---------------------S-----------------------------------S----------------------
-----------------S--------------------------------------------------------------
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-----------------------------------------------S--------------------------------
-----------------------------------------------------------------------S--------
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-------------------------------------------S-------------------------------S----
----------------------------------------------------------------------------SS--
-----------------S--S-------------------------------------------S---------------
------------------------------S-------S---
>forward_391
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---------------------------------------------------GCCCGAGACGTTGTTCAAAC---------
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>reverse_3352
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-----------------------------------------------------------------------GAAGAGAAG
TTTACTTTGGCTGCT-----------------------------------------------------------------
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