>input_sequence_73724
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-------------------------------------------ATGGCGTCCAAAGTCCTTCTTGCAATCCTCCTCCTCG
CCGCGGCGACGCCAGCGTCGCTGGCTGCCATCGATGTGGCGCAGATGCTCGCTGACAAGCCCCAGTACGCGACCTTCCTG
AGGCTCCTGAAGGAGACAAAGGTCGCCGATGACGTGAGCCGGCTCAAGTCGGCTTCCGTGCTGGTCGTCCCCGAGAAGGC
CGTAAAGCCACTCTTGGCGGTGCCGGCCGCCAAGCAGCGGACGATCCTCCAGCATCATGTCCTCATCAAGTATTTCGACC
CCATCCAGCTGGGCGAGATGAAGACCAACGTTGCCAAGCTCCAGACCATGCTCTCCAACACAGATAAGGACATGGGCACC
ATCGACTACTCCAAGGACAAGGACGGCCAGATGTACCTACGCTCCCCAGGCGCCGATAGTGTCGCCAAGCTCGTCAAGGT
CGTCGCCGCGCGCCCCTTCACCGTCTCCATCATGGAGATCAGTGCGCCGCTCTTGTGCCCCAAGCTACTCGGCCCTGGCG
CCGCCGGCGCTGCCGCTGGGAGGCCCAAGGGGAAGGGGAAGGGCAAGGGCAAGATCAAAACCATGTCCGCTGAGGATGGG
GCCGCCGCCGCTGCTCCGACGGCCTGA-----------------------------------------------------
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>chr3D_1_TraesCS3D01G000200
GGATGTCACGTGTCCTTCACTTTGCCTATCAATTTTCAATGCCAGCCAGCGATTCCCGATTCGATTCCTTCGCTGCCTTG
GTGTGGCGAACGACCTCGTCCCCGGCGGCTGAACGGCATGACGAAACTACTACCTCTCATCCAAGGCCACACCGAAGGAT
CTCATCACCGGCGGCCACGAGACATGATGCTGTGACAACTTCTCGTCTATATTCACGCCGGAGGACTTCGTTGGCGGCGT
TGCTGACCGACTCCACGTTCATCTTGGCAGTACGCCAAGACGCTGTTGGCGATGGCCGGGCGGATTGTCAACGGCGGCAA
CGAGGCAAGACGACTCCTTGATCATGGCGGAAGCGGGCCAAGACAGTCATGTCACTAGCGGCCGAACCTGCTACTTGTTG
ATGCTGGCTTTGCGCCAAGACCGATCGGGCTACTCCATGGTGCCGCAGTTTAATTCCATCGGTGGATCGAGAGAGCAAAA
AATGCATCACACCATCACCAGCTGGGACACGATGCCACTGTCGAATTTCATCAAAGAGCGTGCACCATGCCCAAAAATTC
TAAAAATAATAATCAGGAATAATGTAGTACATCGCTATAGAAGTGATAAACGATATGGAAATGCAAATACAAAATCTTGA
ACCACATAAAAATGCAAATATAAAATCTTGAACTAGGTTAAAACTCCACGTCCCCGTCTATC-CCCTTCTTTAGTAATAC
CTATAAATAAACACGTAAAGGATGGAGAACCGGCATATAGATGTGGAGTGGCCACAATATGTGAACCAATGGAAGTTTCT
TTTCTTTTTGCAG--AAAGAGAGGCCTTCCCTTCGATTTCCATTAATAGAAACCATGGTCTGAAATTACCCGAAACCAAT
GGCTTGCCGTCCGCAGAATGTTTGGAGGAAACAAACCCTTCTTCGACAAAAATAGCAATAACCCCAGCCTTTATAATCAG
CCATACATCTCGACCATCACCGTCATATCGACAATCAACCACGATGGCGTCCAAAGTCCTTCTTGCAATCCTCCTCCTCG
CCGCGGCGACGCCAGCGTCGCTGGCTGCCATCGATGTGGCGCAGATGCTCGCTGACAAGCCCCAGTACGCGACCTTCCTG
AGGCTCCTGAAGGAGACAAAGGTCGCCGATGACGTGAGCCGGCTCAAGTCGGCTTCCGTGCTGGTCGTCCCCGAGAAGGC
CGTAAAGCCACTCTTGGCGGTGCCGGCCGCCAAGCAGCGGACGATCCTCCAGCATCATGTCCTCATCAAGTATTTCGACC
CCATCCAGCTGGGCGAGATGAAGACCAACGTTGCCAAGCTCCAGACCATGCTCTCCAACACAGATAAGGACATGGGCACC
ATCGACTACTCCAAGGACAAGGACGGCCAGATGTACCTACGCTCCCCAGGCGCCGATAGTGTCGCCAAGCTCGTCAAGGT
CGTCGCCGCGCGCCCCTTCACCGTCTCCATCATGGAGATCAGTGCGCCGCTCTTGTGCCCCAAGCTACTCGGCCCTGGCG
CCGCCGGCGCTGCCGCTGGGAGGCCCAAGGGGAAGGGGAAGGGCAAGGGCAAGATCAAAACCATGTCCGCTGAGGATGGG
GCCGCCGCCGCTGCTCCGACGGCCTGATCTGAGAATTGAGTAAGGTGGCCCTGCAGGACGCCCCCCGTGGAACCATGCGT
GCACAAGTTTGGATTTTATCTTTATTATGCAAAGGCTTCATACATCTTCTTTTTTT-TG----CTACTGTACTAATTTTG
TGTTTCCAGTATTCTATGATT-----------------------------------------------------------
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-----------------------------ATTAGTGAAGTGAACTGAGTACAACTAGA----GGTTGGGGCGCGCCTCCT
GTGCATTGTGCGCGTTTTTTTTGGGTGCCAAGGCAGTCAATCGAGGAAGAATGTAACAATTACCTTATTTTTTGAGACAT
CTGCTTTCTTTTTTGAGACAACCTCGCGAAGCTTTTTATTAAAGCGTCACAATGTTTACAGGAACGAAAGAAAGATCTTC
GGGATGACCTAACCAAACATGGCGGCCACCCCCGAGAGACAACTGCTTGTGATGTTAATTTGATTTTATGGACCCTGATA
TCTCCTGTACCGAACCAACCGTTAGCTGGGTAGGTTCGATCAATCGAACAGCGCGACCCAACCCCCCAACGCTCGCTAAT
AGCGTCTGCATCAATCCAAGGCTGGGCCAAAAACGTGCCAAGTACTAGCCCAAAAAACAAGCCTTATTAACGCTGGCCCA
AAAGACGTCCCTCTTGCACTGGCACGGCTAGGAAAAGCTAGTACGTATTTGCCATGTCTTACTGTAGATTCAAAACACCA
CATCCTAAAACTGTTGAGACTACAAAAAAATGCAGTGGAAAAAATACGCAAAAATATGTAACGCATAGCAATTTGGTGAG
GATATAATACACATTGGCCTTGTGGTATATCTTTCTACCTTGTGAAAAATATGATATGTGTTTGCCGTACTCTAGTTTAT
AAAGTTTTTCATGCTTTAATTAATAAAAATTAACTTATACCACAAACTAGA-----------------------------
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-----------GTATGAGGCATGCGTACTC-----TTTTGGCATATCTTAATCCACATAACGTTTTTGCCATGACATGGT
CAATGAACTAGG--------------------------------------------------------------------
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---------------------------------------------------------CATTGTAGTGGCGTACTGAAAAT
ATGAACAAAGTTGC------------------------------------------------------------------
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>chr3A_551
CCAAAAATT-----------------------------------------------------------------------
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TAAAAATAATAATCAGGAATAATGTAGTACATCAATATAGAAGTGATAAAGGATATGGAAATGCAAATACAAAATCTTGA
ACCGCATAGAAATGC-AATATAAAATCTTGAACTAGATTAAAACTCCAAGTCCAC----ATC-CCCTTCTTTAGTAATAG
CTATAAATAAACACGTAAAGGACGGAGAACCGGGGTATAGATGTGAAGTGGCCACAATATGAGATCCAATGCATATTTAT
T---TTTTTGAAG--AAAGAGAGGCCTCACCTTCGATTTCCATTAATAGAAACCAGGGTGTGAAATTACCCGGAACCAAT
GCCTGGCCGTCCGCAGAATGTTTGGAGGAAACAACCTCTTCC---ACAAATATAGCTGCAACCCCATTCTTTATAATGAG
CCATACATCTAGATCATCACCATCATATCCACAATCAACCACGATGGCGTCCAAAGTCCTTGTCGCAATCCTCCTGCTCG
CCGCGGCGACGCCAGCGTCGCTGGCTGCCATCGATGTGGTGCAGCTGCTCGCCGGAAAACCCCAGTACGCGACCTTCCTG
AGGCTCCTGAAGGAGACAAAGGTCGCCGATGACGTGAGCCGCCTCAAGTCGGCTTCCGTGCTGGTCGTCACCGAGAAGAC
CGTGAAGCCACTCTTGGCGGTGCCGGCCGCCAAGCAGAGGACGATCCTCCTGCATCATGTGCTCATCAAGTATTTCGACC
CCATCCAGCTGGGCGAGATGAAGACCAACGTTGCCAAGCTCCAGACCATGCTCTCCAACACGGATGAGGACATGGGCACC
ATCGACTACTCCAAGGACAAGGACGGCCAGATGTACCTACGCTCCCCAGGCGCCGACAGTGTCGCCAAGCTCGTCAAGGT
CGTCGCCGCGCGCCCCTTCACCATCTCCATCATGGAGATCAGCGCGCCGCTCTTGTGCCCCAAGCTACTCGGCCCTGGCG
CCGCCGGCGCTGCCGCTGGCAGGCCC------AAGGGCAAGGGCAAGGGCAAGATCAAAACCATGTCCGCTGAGGAAGGG
GCCACCGCCGCGGCTCCAACTGCCTGATCTGAGAATTGAGTAAGGTGGCCCTGCAGGT---CCCCCGTTGAACCATGCGC
GCACAACTTTGGATTTTATCTTA---ATGCCAAGGCTTCATACATCTTCTTCTTTTCTG----CTACTGTACTAATTTTG
TGTTTCCAGTATCCTATGATTATTAGTGAAGTGAATCGCAGTACTACTAGAGGTTGGGGCGCACCTCCTGTGCAGCGTGC
GTGTTTTTTTCTTGTTTGGTGCAAAGGCAGTCAGATCGAGGAAGAATGTAACAACTGCCTTCTTTTTGAGACAACTACTT
TTGTTGTTGCTTTTTCTATGGACCCTGGTATCTCCCGAACGTTCCGTCTGCGGGGCTCCTGTACCGAACACACAGTTTTT
TTAGGGAATACCGAACACACCGTCAGCAGTCGATCCATTGAACGATTTCGTTTGCTAGGCGAAACCCTCCAGCACGATCC
CCCAACGTGACATACCCCTCCCATCGAGCATTTTATATTTGGAGCTGAAGGTGCTGGTTAAGGTGGCCCTCCAGGACGCC
CCGTTGAACCATGCGTGCACAACTTTGGATTTTATCTTAATGTCAAGGCTCCATACATCTTCTTTTTTCTGCTACTGTAT
TAACTTTGTGTTTCCAGTTTCCTATGATTATGAGTCAAGTGAACCAAGTACAACTAGA----GGTTGGGGCGCGCATCCT
GTGCAGTGTGCGCATTTTTTT-GGGTGCAAAGGCAGTCAATCGAGGAAGAATGTAACAACTGCCTTATTTTTTGAGACA-
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-----------------------------------------ACTGCTTGTGATGTTAATTTGATTTTATGGACCCTGATA
TCTCCTGTACCGAACCAACCGTTGGCTGGGTAGGGTCGATCAATCGAACAGCGTGACCAAACACCCCATCGCTCACTAAT
AGAGGTTGCATCAATCCAACGCTGGGCCAAAAACGTGCCAAGTAGTAGCCCAAAAAACAAGCCTTATTAACGCTGGCCGA
AAAGATGTCCCTCTTGCACTGGCACGACTAGGAAAACCTAGTA----TTTGCCATGTCTTACTGTAGATTCAAAACACCG
CATCCTAAAACTGTTGAGACCACAAAAAAATGCAGAGGAAAAAATACGCAAAAATATGTAACGCATAGCAATTTGGTGAG
GATATAATATGCATTGGCCTTGTGGTATATGTTTCTACCTTGTGTTGGCCA----------------TACTCTAGTTTAT
AAAGTTTTTCATGCTTTAATTAATAAAAATTACCATGGTGGTGTATTTTAAGTTGTCGTGGTAAAACATGAGGATTAAAT
CTTCAGGTATTATTTCACGGGTGGGGCGAGTTAGAATTTACCTATGATTTTAAAAACGTTAGCACAGAAAATGTGGATTA
TTTTTGTAAGGTGTTTGACAACGTACATGAAGGCACAAAATATGTGGATTAAAAATTGCCATCACGTAGAACACAAAAAG
TGTACCATATATTGTTTAATAGTAATTTTTCATGTTTCATATAGAAAAATTAACGTGGTCCCATGCATGCAAAGAATCCC
ACAAACGATGAAACTAAAATTTTCATGGATGTAAATTAAATTTACAGGGCACTATAAGTAAATTTTCCACGGCAAAAAAG
GTAAATTTTTCATGAGCAATTAAATTAAAAATTCCCATATATGGTAAAGATAAAATTTCCATGGAAAATAAAAAAAGGAA
AAACTTTTCATGGCAATAAAAGTAAACTTGCCATGGAAATAGGTTAATTTGCCATGCCACAAAGTAAAATTTTCCCTACT
CTTAAAAAGGATAAAATGTTATGAACATCAAATTTTCATACATGTTTGTCATGTGATAAATTCCATGAAATATCTCAAAT
CTTGATTTGATGTATGAGGCATGCATTTTTGAAAATTTTGGCATATCTTAATCCACATAACTTTTTTGCCATGACATGGT
TAATGAACTAGACACACTAGTAGAAAACGGCCCATTAGCCCCGGTTCCAGAGGCCCTTTAGCCCCGGTTCTGGAATCGGG
ACTAAAGGGTCGGGACTAAAGCCCAAAACCATTAATCTTGGTTCGCTTACGAACCGGGACAGAAAGGGTTCCACGTGGCC
GTTGCGGGGCGCCTAGGCAGAGGACCTCTAGTCCCGGTTGGTAACACCAACCAGGACCAAAAGGCATCCACGCGTCAGGA
GCTGGCTGGAGCAGCGGGTTATGTTTTTTTTTTTTGAAAGGGGGGGGGGTTAGGGGGTTTTGAAGGGTTAATTTAGTGGT
TTCATATATTGAGTTAGCTAGCTAATAGAGGGAAGTGTATGAACAAAGTTGCCATGGTAGATGCATATTAAAAAATTTCC
ATTCTATTTTTTTCTTATAATTGTCATGATTTGTGTAAGAAAAATGCCATGTATGTACATTGTAGTGGCGTATTGAAAAT
ATGAACAAAGTTGCCATGGTAGATGCATATTTAAAATTTCCATTCTATTTTTCCTTATAATTGTCATTCTTTGTATAAGA
AAAATGCCATGTATATAAATTATTTCTGCCATGATACAAAGGTCGGCACCGCCAAGAGTGGCTTTATGCGACCTTCCCGT
GGCTCCCGAAGGAGATAAAGGTCACCGATGCACTACTAGGGAAAACTCTATACACAGAATCTTAGCAGCAGCGCGGCTCA
AAAAGGAGCGCTGCTACTAATTAGCAGTAGCGCGGGTGTGGAAAACCCGCTACTGACAAGTGCTTAGCAGTAGCGCGCTC
GGCGTAACCCGTGCTGCTACAAATATCGAGCGATAGTGCCCACCCAACTCCATTTAGCAGCAGCGCGGTGCCGCCAGCCG
CGCTACTGCTATAGCTGTAGCAGTAGCGCGGTTTTTCTGAGGTCGCTGCTGCTAATTTTTAAATCGGGCACACTTTTGGC
CCCGGTTAGCTGTAGCGCTTGTACTGAAAGCGCGCTGCTGCTACTTTCTTAGCAGCAGCGCGTTTTACGTACCGCGCTAC
TGCTAATCCACACCCACCATCTTTTCCCCACCCGTCCTCCCCCTCCCCCAAATCCCTCCTCTCTTCCGCCACTCTCTCCT
CTCTCTCTCTCTCTCCATACGTTCTCACATTGACCTCTTGCCCATGCGCCCTCCTCCTCCATGGCATCGAAAGAGGGCGC
CGCCTCGCGCCACTGGTGTCTAGGAGCTCGCCGGTCTTCCACCGGCGTCTAGGAGGCCGCCGCCTCGCGCCACCACGCCG
GAGACCTAACCACCGGTGACCAGCCCCGCTACTCCCTCCCTCTCCTTCCTCTCTCCCTTGGTTTTCTCTCTCTCTCTCTC
TCTCTCCCTTTGGTTTGACTCACAATCCCATGTCCATGCCCGTGCAGGTAGTCGCCATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNACCTCTTGCCCATGCGCCCTCCTCCTCCATGGCATCGAAAGAGGGCGCCGCCTCGCGCCAC
TGGTGTCTAGGAGCTCGCCGGTCTTCCACCGGCGTCTAGGAGGCCGCCGCCTCGCGCCACCACGCCGGAGACCTAACCAC
CGGTGACCAGCCCCGCTACTCCCTCCATCTCCTTCCTCTCTCCCTTGGTTTTCTCTCTCTCTCTCTCTCTCTCCCTTTGG
TTTGACTCACAATCCCATGTCCATGCCCGTGCAGGTAGTCGCCATGGACGACCATATCTGGCATGGTCGGGAAGAGGAGC
CCCACGCCGCTGCCTTGCTCTTCCATGGAAACAGGCCCTCCTGCAACAGCCACTGCCAGATCTGGTCTGCCGCTGCTCGT
TCATGCCTCCGGCGACCCCAACCATTGCTGGATCGAACAACTGCTGCCATTAACAACACGCACGGGATCGATATATCTTT
TTCTTTTGAATGTAATAGTAGTAGCGCGGGGTATAAGACCCGCTACAGATAATTAGCAGTAGCGTTGTACTGCAACGCAC
ACTACAGCTAACTATGTATAGCAGTAGCACGTGTCAACACGCGCTACTGCTACAAGTTAGCTGTGGCGCCGTATTAGTAG
CGCGGGCGCCCCGCGCTACTGATACACCCAAAACCTGCGCTACTGCTGAGCTTTTCCCTAGTAGTGATGACGTGAGCCGG
CTCAAGGCGGCGTCCGTGCTGGTCGTCCCCGAGAAGGCCATAAAGCCACTCGTGGCGGTGCCGGCCGCAAAGCAGCGGAC
AATCCTCCTGCATCATGTGCTCATCAAGTATTTTGACCCCATCCAGCTGGGCGAGATGAAGACCAATGTTGCCAAGCTGG
AGATCATGCTCTCCAACATGGATAAGGACAAGGCACCATCGACTATTCCATGGACAAGGACGGCCAGATGTACCTACGCT
CCCCAGGCGCCGAAAGTGTCGCCAAGCTCTTCAAGGTCGTCGTTGCGCGCCCCTTTACGGTCTCCATCATGGGGATCAGC
GCGCCGCTCTTGTGTCCCAAGCTACTCGGCCCCGGCTTCGCCGGCGCTGTCGCCGCTGGCAGGCCCAAGGGCAAGGGCAA
GATCAAAAACATGTCCGCTGAGGAAGGGGCCACCGCCGCTGCTCCAACTGCCTGATCTGAGAATTGAGTAAGGTGTGTTG
GAATAAGCTACAACGGCCGTGGCGCGCGGCGGCGTCCGCGGTGCCCGCGGTGCGCGGCGGATATGAAGGTCTTGGCAACG
GTGCACGGCGAGCGCGTGGCGTCCGCATCGCGCGACGAGTCCACGGCGGTGTGGCGTGATGCCGGGCGCGCGGCGAGCGC
GTGGCATCGGCAACGCGCGGCGAGTCCACGGCGGTGTGGCGTGATGCCGTGCGCACGACGAGCAGCGTTTGCGGAGACGA
GGAGGTCGCGGAGGACCTGCGTGGTGTCGCAGAGGCCGCGGCGGCTCGGCGCGATGACCGTGGAGGCGCTGCGCTGCGGT
TGACGGCGCAACGGTGCAGGGCAATAAGCGCGGCGGCGAGCCGGGCGCGACCGGTGCGTGTTATGCGTGCGCACCAGACG
CGTCGGGCGCGTCGGGACCGCGGGAGTGGACCGCGTCGAGGCGCTGGACCTGGTTGCGCAGATCACGTACGTGCGCGGCG
GGAGTGCGGGGACGTGGGGACTGCGCGCGAAGGGCACGGCGGCACGGTGGCAGGCTTGGCAGCGACATCAGGGTGGTGGC
GGCTACAACGTCGACGACGACGGACTCCTCTAGGTCGTGGCTTAGGGAGTGTGTGTTGGAATAAGCCATGGCATGTGTGG
TCGGGCTCGTCGGGCGCGTCGGATGCGCGCGGGACACACTGATGCCGTCGGGCGCGTCGGTGGCGCGCGGGACGGACGGA
ACGTGCGAGACACAACAACGTGGCATATGTGTGTAGCGTGTGTACTCAGTCTGGCACGTAGAGCAGGCCGTTGGCGAGTG
TGCTGGCCAAGTTTGCTACTCCTACATGCAAGGCTGAGTTAGTTAGCTAGGTGAGCTTTTCTAGGAGTGGATGAGTACGT
GCGGTTAGTGGCCGGTTGTGAGGCCGGGTCCTGCGTAGGTGCATAGATTAGTGGCCGGTGTGGTCGATGAGCTGTGCGCG
TGCATCTTCTACTTAAGTGTTGTGCTTGTGCCTGTAGCCGTGAGGCAGTTGGAGCTCTGAATAATAACGGGGCTGTGAAG
TCGGATGAAACTCCAGTGTACTGTGTGCTCCTCCTTTTTCTACCTTCATTCATCCGTGTAAGAGAACGGTTCCAACAAGG
TGGCCCTGCTGGACGCTCCCGTTGAACCATGCCTGCATAAGTTTGGATTTTATCTTACTGTCAAGGCTTCATACGTCCTC
CTTTTTTTCTGCTACTGTACTAATTTTGTGTTTCCAGTATCCTATGATTATTAGTGAAGTGAACCGAGTACAACTAGAGA
TTGGGGCGCGCCTCCTGGTGCAGCGTGCGCGTTTTTATTTTCTTTTTTACGGGTGCAAAGGCAGTCGATGGAGGAAGAAT
GTAACAACTGCCTTCTTTTTTGAGACAAATGCTTGTGTTGTTACTTTATTTATGGACCCTTATATCTCCCAAACGTTCCG
TCTGCATGCGGGGCTCCTGTATCGAACAAACCGTTAGCTGGGTAGGGTCAATCTATCAAACGAGGGAGCAACTAGTTAAC
GAGCGCTCCTTCGGGAGCATCGCAATGATCAGCACCACTTGATGCGTTTTTAGCCATTTACCACGTGTCGCACTTTGGAC
GCTCCCTTCGGATTTTGTTTTTTTATTTTTCCGCACGTGTTTTCGTCTTTTTAAACGTTTTTTTCCGGGTTTTTTCGACG
TTTTGGTTTTCCCCTGGTCTTTCTTACCTTTTCGATAAAAAAAATTCGAAATTTTTTTTTGCGCGAAAAAACGGATTTTC
TTTTTTTTTCCTTTCGCGAAAGTCACGGTTTTTCTTCCACGAGAGATGTGCCTTTCGGAAACGGAAAAAATGTGTTTTCT
GTTTTTTTCATACGCACACGCAAGATCATGGTGATGCATAGCAACGAGAGGGGAGAGTGTTGTCTACGTACCCTCGTAGA
CCGTTCGCGGAAGCGTTATATCAACGCGGTTGATGCAGTCGTACATCTTCACGATCCGACCGATCCAAGTACCGAAAGAA
CGGCATCTCCGAGTTCTGCACACGTTCGGCTCGGTGACGTCCTCGCCTTCTCGATCCAGCAAGAGGGGCGAAGTAGTAGA
TGAGTTCCGGCAGCACGACGGCGTGGTGACGGTGTTGGTAAAGAACAATCTCCGCAGGACTTCGCCTAAGCACTACGAAA
ACTAGGACGGAGGATAAACTAGTGGGGACGGGGTTGCCGGCACACGGCTTGGTGTTTCTTGATGTGTCTTGGGTGCTAGC
CCTACCCCTCTATTTATATGTTGAGCCTTGGGGTCGAAACTTGGAGTAAAAGCCTCCACAAAGTCGGTTTCATCCGAAAG
GTAAGAGTCCTTCTCGGACTCCAGGGCCAGACGCCAGGGTTCCCGGCGTCTGGACCCAAACGCCAGGGACCTGGCGTCTG
GCCCCTGGACTCCGCAAAACTTCCTTTTGGTCTTTTCCAAAAACCTTGTGGGCTTTCCCCTTTGGGCAAAATAAAGTGTT
CTCGTACCCAAACATTTCGGGAAACATTCGGAACCCCTTCCGGTGAATTCCGGAACCCTTCCGGTGACCAAACACTATTA
TCCCATATATCAAACTTTATCTCCGGACCATTCCGGAGTTCCTCATCGTGTGCATGATCTCATCCCGGACTCCGAACAAC
ATTCAGTCACCAACATACATAACTTATAGTACTATATCGTCAACGAACTTTAAGCGTGCGGACCCTACGGGTTCGAGAAG
TATGTAGACATGACCGAGACACCTCTCTGGTCAATAACCAATAGCGGGACCTGGATGCCCATATTGGCTCCTACATATTC
TACGAAGATCTTTATCGGTCAGACCGCATAACAACATACGTTGTTCCCTTTGTCACCGGTATGTTACTTGCCCAAGATTC
GATCGTCGGTATCTCAATACCTAGTTCAATCTCGTTACCGGCAAGTCTCTTTACTCGTTCTGTAATACATCATTCCGCAA
CTAACTCATTTAGTTGCATTGCTTGCAAGGCTTAAGTGATGTGTATTACCGAGAGGGCCCAGAGGTACCTCTCCAACAAT
CGGAGTGACAAATCCTAATCTCGAAATACAACAACCCAACAAGTACCTTTGGAGACACCTGTAGAGCATCTTTATAATCA
CCCAGTTACGTTGTGATGTTTGGTAGAACACAAAGTGTTCCTCCGGTAAACGGGAGTTGCATAATCTCATAGTCATAGGA
ACATGTATAAGTTATGAAGAAAGCAATAGCAACAAACTAAACGATCAAGTGCTAAGCTAACGGAATGGGTCAAGTCAATC
ACATCATTCTCCTAATGATGTGATCCCATTAATCAAATGACAACTCTTTGTCTATGGCTAGGAAACATAACCATCTTTGA
TCAACGAGCTAGTCAAGTAGAGGCATAATAGTGACACTCTGTTTGTCTATGTATTCACACATGTATCATGTTTCCGGTTA
ATACAATTCTAGCATGAATAATAAACATTTATCATGATATAAGGAAATAAATAATAACTTTATTATTGCCTCTAGGGCAT
ATTTCCTTCATAATACACATTGCCTTGTGGTATATGTTTCTACGTCGTCAAAAATATGGCATGTCTTAGCTATACTCTAG
TTTATAAAATTTTTCATGCTTTAATTAATAAAAATTA
>chr3B_553
--AAAAATT-----------------------------------------------------------------------
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CTAAAAGAATAATCAGGAACAATGGTGTACAACACTATAGAAGTGACAAACAATATAGAAATGCAAATACAAAATCTTGA
ACCACGTGGAAATGTAAATACAAAATATTGAACTCGTTTAAAACCCCACGTCCAC----ACCTCCCTTCTTTGGTAAAAC
CTATAAATAAACACGTAAAGGACGGAGAGCCGGCATGTAGATGCGGAGTGGCCACAATATGTGAACCAATGAAAGTTTCT
TTTCTTTTTGAAGAAAAAGAGAGGCCTTCCCTCCTATTTCCATTAATAGAAACCATGGTCCGAAATTACCCGAAACCAAT
GGCTTGCCGTCCGCAGAATGTTTGGAGGAAACAAACTCTTCTTTGACAAAAATAGCAATAACCCCAGCCTTTATAATCAG
CCATACATCTCGACCATCACCGTGATATCGACAATCAACCATGATGGCGTCCAAAGTCCTTCTCGCAATCCTCCTCCTCG
CCGTGGCGACGCCAGCGTCGCTGGCTGCCATCGATGTGGCGCAGATGCTCGCTGACAAGCCCCAGTACGCGACCTTCTTG
AGGCTCCTGAAGGAGACAAAGGTCGCCGATGACGTGAGCCGCCTCAAGTCGGCTTCCGTGCTGGTCGTCCCCGAGAAGGC
CGTAAAGCCACTCTTGGCGGTGCCGGCCGCAAAGCAGCGGACCATCCTCCAGCATCATGTGCTCATCAAGTATTTCGACC
CCATCCAGCTGGGCGAGATGAAGACCAACGTCGCCAAGCTGGAGACCATGCTCTCCAACACGGATAAGGACATGGGCACC
ATCGACTACTCCAAGGACAAGGACGGCCAGATGTACCTACGCTCCCCAGGCGCCGATAGTGTCGCCAAGCTCGTCAAGGT
CGTCGCCGCGCGCCCCTTCACCGTCTCCATCATGGAGATCAGCGCGCCGCTCTTGTGTCCCAAGCTACTCGGCCCTGGCG
CCGCTGGCGCTGCCGCTGGCAGGCCC------AAGGGGAAGGGCAAGGGCAAGATCAAAACCATGTCGGCTGATGAAGGG
GCCGCCGCCGCTGCTCCAACTGCGTGATCTGAGAATTGAGTAAGGTGGCCCTGCAGGACG-CCCCCGTTGAACCATGCGT
GCACAACTTTGGATTTTATCTTC---ATGCCAAGGCTTCATACATCTTCTTTTTTT-TCTCTTCTGCTGTACTAATTTTG
TGTTTCCAGTATCCTATGATTT----------------------------------------------------------
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---------------------------TTCTTAGTGAAGTGAATCGAGTACAACTAGAGGTTGGTTGGGGCGCGCCTCCT
GTGCAGTGTGCGCGTTTTTTT-----------------------------------------------------------
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>chr3A_1631
GGCATATCTTAATCCACATAACTTTTTTGCCATGACATGGTCAATGAACTAGACATTGTAGTGCCGTATTGAAAATATGA
ACAAAGTTGCCATGGTAGATGCATATTAAACATTTCCATTCTATTTTTTCTTATAATTGCCATGCTTTGTATAAGAAAAA
TGCCATGTATGTAAATTATTTTTGCCATGATACAAAAAAGAAATTTGCCATGGTACTTGAATTAAACTTGCAATGGTCCA
TAAATTA-------------------------------------------------------------------------
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--------------------------------------AGTAAGGTGGCCCTGCAGGACA-CACCCATTGAACCATGCAT
GCACAAGTCTGGATTTTATCTTA---ATGTGAAGGCTTCATACATCTTTTTTTT--CTG----CTACTGTACTAATTTTG
TGTTTCCAGTTTCGTATGATTA----------------------------------------------------------
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---------------------------TTC---GTGAAGTGAACCGAGTACAACTACA----GGTTGGGGCATGCCTCCT
GTGCAGTGTGTGGGTTTTTTTTG---------------------------------------------------------
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-------------------------------------------------CGGGTGCAAAGGTAGTCGATCGAGGAAGAAT
GTAACAACTGCCTTCTTTTTGCGACAACTACTT-----------------------------------------------
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>SNPs
---SSSSSSSSS---SSSSSSS-SSS-SS-S--SSSSSSSS-S-SSS-SSSSSSSSS-SSSS-SSSSS--SSSSSSS-SS
SSSSS-SSSS-SSSS-S-SSS-SSSSSSSSS-SSSS---SSSSSSSS-S--SSSSS-SSS-SSSSSSSSS-SSSS-SS-S
SS-SSSSSSS-SSSSSSSSSSSSSSS---S-SSS-S--SSSSSSS-SSSSSSSS--SSSSSSSS-SS-S-SSSSS-S-SS
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
---------------------------------S----------------------------------------------
--------S---------------------------S----------------S-SSSS---------------------
----------------------S------------------------------------------------S--------
----------S---------------------------------------------------------------------
------------------------------------S------S------------------------------------
---------------------------------------------------------------S----------------
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-----------------------------------------S--------------------------------------
------------------------------------------------------------S-------------------
-------------------------------------------------------------S------------------
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------------------------------------------S-------------------------------------
-------------------S------SSSSSS--------------------------------------------S---
-----------------S--S---------------------------------------S-------S-----------
----------------------SSSS----S-------------------------------------------------
------------S-------------------------------------------------------------------
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--------------------------------------------S-----------------------------------
-----S----------------------S------------------------------S-S-----------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------
-----------------------S----------S------------------S----S---S-----S-----S-----
--S-SS-------------S------------------------S---------------------------------S-
-----S--------------------S---------S------SSSS--------------------------------S
--------------------S--------------S--------------------------------------------
---------SS-------------------S-------------SSSSSS-SSSSSSSSSSSSSSSS-------------
--------------------------------S-S-SSSSSSSS-SS-SS------------------------------
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------------------------S-SS-S-------------------------------S------------------
S----------S--------------------------------------------------------------------
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>forward_442
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----------------------GATCGGGCTACTCCATGGTG--------------------------------------
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>reverse_2511
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------------------------------CCCGAGAGACAACTGCTTGT------------------------------
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-------------------------------------
