>input_sequence_73721
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---------------------------------------------------------------------ATGGACGGCAA
GGCGCCTCAT---CTGCTGCCT----------------------------------------------------------
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---------------------CTGAGTCTGAGCGAG---GCCAAAAAGAAGATCCGGGATGACGTCCCACTGGTCTGCGG
ATGGGCGCTCCTCAACGCCTTCGCCACGCTCTGCGGCGTAGCAAGCGGCTACATAGCTGACTACATCCATGTGTCGTGCA
GCCAGGTA--ACCACCTACC-----------CGTC----ACCCT-TCGGA-----------TGTTTCAC-------ATCG
CA-----ACCGATCCATCATGCCCCAAGCTGCTATGGTGTT-------CCTCTGCAGTCCTCCTTCATTCTGCCGTGCAT
CGAGCTGACGGACGCGGAGGCCGCCAGGCTAATCGCCCTCTGCGTCGGGCTGCTGTGCTGCGCCCCATTCCAGGCGGCCG
CGGCGGCGCTGGCGCTGCTGCTCCCATGCCGCCGTCGCCGGGCCCGCCGGGCCCTCGCCTACCTCGCGCTGGCGGTCACC
ATCCTCTTCCATTGCATGTACGCCAGCGCCGTCTGGGTCTTCCTCGCCGCCGACCTAGGATACATCTTCGGCAGGATCTA
CTTCACCACGGGCCTCTGCTTCTTCGTGGTGGGCGACCTCCTCAGCTTCCGGGTCCTCCT--GGGTGGTGAGGGGTGGGG
CATGAA----GTACGTAGCCTATTTCTT---CTGA---------------------------------------------
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>chr3B_1_TraesCS3B01G337000
GTCGGAAAAGATTAAGGGGGTGTTTGGTTCAGGGACTTTTTAGTCCCAGAGACTAGAAAAAGTCCCTAAAAAAACCCTAG
GAACCAAACAGGAGGGACTTTTTCTACAGGGACTAGAAAAAAACTCTACTAGAGAGTCTTTTTTGATTAGTCCCTGAGAC
TAGAAAAAGTCCTAAGACTCCTAAACCAAACACCCCCTAACT--------------------------------------
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----------------------------------------------------AAACCAGACAATTCAGTCAAATCGTTGT
ACTAGCTAGCTGATCCGAATGTGGATGAGCCACCGCCAGTCATCGGAGTGGTACGGTGTGGAT---GGTGCACCGTGCAG
GAAGCCGGGGTTATTATTACGAGTACATGCG-----------------TAGAAATCACACTAGCTATAGTTTGAAACTT-
AAACTGGCCGTGCAGCTAATTAGAACGAGCAGGCTAGCAAGCTTTTCACTGCC------CCGTATGCATGTGCGCGTGCT
ACGTT--TTCACGTTTTTGTCAACCTGCAAAGAAACTGAGTGTGCCA--CCTCGTTGCCAAAGAGGGTATGGGTGCTTCG
CGGACGCAA-CTTCGCGGTAGTTTCCTTTCTC-ACTGCCATTGCCATGAGATGAACCGGA--CTCTCCTCCCTGTGTGTG
TGTGTGTGT----GT------------GTGTCTGTGTGTG----------------TGTGCGC-----------------
------------GCTGCGGCTGGTCGACACGTA--GGGTTTTGGAGCGGCCCCACGTCGCTGCTGCGGTGCC--------
----------------------------------CTCGGCCACTTAAACTCCC-CCCTCCACCACTAGCTAGCGTCGTCG
TTGCCCTCTGTGG--------TTGTAGCTCGAGCCCTTTCAG--------------------------------------
--------------------------------------------------------------------------------
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--------AAGGAAGCACGCCAAGCTAGCAAGCTAGG-AAGAACCTCCCTCCCGTGCATCTGACCAGCGA-----GTGA-
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------------------------------------------------------------CGGTGAGTCCCCTCCATCTC
CGG-----------------------------------------------------------------------------
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-----------------------------------------------------------------------------CCA
TCTTGCTAATGTG------------------------------CTTTTCCTCTTCTTCTTTC------------------
TCCTCCTCTTCTTCTTTTATGTCGAATGGGGACATGAAATTAGAGAAG-A-GGAACTAACCATACG----------TTGT
TGCTGATCTCGTGAACTCATCCTACTCCTAC----------------CTAG---CTTG----GATCTCCATGGACGGCAA
GGCGCCTCAT---CTGCTGCCT----------------------------------------------------------
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---------------------CTGAGTCTGAGCGAG---GCCAAAAAGAAGATCCGGGATGACGTCCCACTGGTCTGCGG
ATGGGCGCTCCTCAACGCCTTCGCCACGCTCTGCGGCGTAGCAAGCGGCTACATAGCTGACTACATCCATGTGTCGTGCA
GCCAGGTA--ACCACCTACC-----------CGTC----ACCCT-TCGGA-----------TGTTTCAC-------ATCG
CA-----ACCGATCCATCATGCCCCAAGCTGCTATGGTGTT-------CCTCTGCAGTCCTCCTTCATTCTGCCGTGCAT
CGAGCTGACGGACGCGGAGGCCGCCAGGCTAATCGCCCTCTGCGTCGGGCTGCTGTGCTGCGCCCCATTCCAGGCGGCCG
CGGCGGCGCTGGCGCTGCTGCTCCCATGCCGCCGTCGCCGGGCCCGCCGGGCCCTCGCCTACCTCGCGCTGGCGGTCACC
ATCCTCTTCCATTGCATGTACGCCAGCGCCGTCTGGGTCTTCCTCGCCGCCGACCTAGGATACATCTTCGGCAGGATCTA
CTTCACCACGGGCCTCTGCTTCTTCGTGGTGGGCGACCTCCTCAGCTTCCGGGTCCTCCT--GGGTGGTGAGGGGTGGGG
CATGAA----GTACGTAGCCTATTTCTT---CTGATCATGTTCGTGGATCAGC------TCACTGCGTACTGAT----GA
GAGCGTG------------------GAGTATGCATTAAGTATGCTGTGACGATTGAT--GGAGTAGTGCC----------
--------------------ATATTTGCGAATCTAGTAGCTGGTGTAGTGTTAATTAGTATCCAGATCGACTCTATTAGT
AG------TTACTCCATTTGGGCAATGCTTTGCTGGCTAGTATATAATTAGACTGGATGGATTGGTAGATTGCGGTTATC
TTTGCTGTATTATTCAACCCTCTATGTATGCATGTGATCATCAGACATGAGTTATAT----GCTTACATAGGTCCAGCTT
CGCTATAATTTGATGTCTCTGAAATTGCTGCTGCAGTGTATATCTATGCACACAT-GTTGTTTCTGATGTTAAATTTTGT
TTTTCATTCATTCCGGCAACCGCTGGCTTGTCCTCTC------GGCTGGGCTGCGTG-GGGTGCTCTCAGCTGAGATTGA
GTGACCCCCGTCCCGACCATGCTTGTGACCATGCAATCACAATTTGATGTATGGGACAACATGATTTGGAATGCCCTCCT
GCCGATTGAGGTTCTTTTT-TATGCCTTTTCCTATATGGGGATCCACACGCCGTCACTTGACTTGTGGGAGCG----GTT
TCACCACAACGCCGTGCATGTAGCCACATATGGCGGATGTAATACAAAAATAAAGAACACAATGATCCTCCTTGAACCTT
CAAAAATTAAGTTTCTTCTGATCGTGGAGTCAATATTTAGCTCATGAGTTATCAATCATCCAAAGAGTTGTGAAATTGTT
CCACAACTTACACATCCCGGAACGCCTCAAACTAATGGGGTATCCGAAAGGCGTAATTGAACTTTGTTGGACATGGTCG-
ACT--GAGAGAAATACATATTTCAACCTTATCAACTTCTAGTTTAATTTACAACCCCAACTCCAAATATGATTAGGACAA
CGTTCAATTAACGGCATAGGACGATTGGATGGTGGTTCTGCATGATGTAGCATCTAGGCTAACTAGTCAAGGTTGATGGC
A
>chr3B_198
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-------------------------------------TAACT--------------------------------------
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----------------------------------------------------AAACCAGACAATTCAGTCAAATCGTTGT
ACTAGCTAGCTGATCCAAATGTGGATGAGCCACCGCCAGTCATCGGAGTGGTACGGTGTGGAT---GGTGCACCGTGCAG
GAAGCCGGGGTTATTATTACGAGTACATGCG-----------------TAGAAATCACACTAGCTATAGTTTGAAACTT-
AAACTGACCGTGCAGCTAATTCGAAAGAGCAGGCTAGCTAGCTTTCCACTGCC------CCGTATGCATGTGCGCGTGCT
ACGTTCATTCACGTTTTTGTCAACCTGCAAAGAAACTGAGTGTGCCA--CCTCGTTGCCAAAGAGGGTATGGGTGCTTCG
CGGACGCAA-CTTCGCGGTAGTTTCCTTTATC-ACTGCCATTGCCATGAGATGAACCGGA--GTCTCCTCCCTGTGTGTG
TGTGTGTGT----GT------------GTGTGTGTGTGTG----------------TGTGTGTGTGTGTGTGTGTGTGTG
CAGCTCATGCATGCTACGGCTGCTCGACACGTAGTGGGTTTTGGGGCGGCCCCACGTCGCTGCTGCGGTGCC--------
----------------------------------CTCGGCCACTTAAACTCCT-CCCTCCACCACTAGCGT---------
----GCTCTGTAG--------TTGTAGCTTGAGCCCCTTCAG--------------------------------------
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--------AAAGAAGCACACCAAGCTAACAAGCTAGG-AAGAACCTC--TCCCTTGCATCCGACGAGCGA-----GTGA-
--------------------------------------------------------------------------------
------------------------------------------------------------CGGTGACTCCCCTCCATCTC
CGG-----------------------------------------------------------------------------
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-----------------------------------------------------------------------------CCA
TCTTGCTAATGTC------------------------------CTTTTCCTCTTCTTCTTTCCCCTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTTTATGTCGAATGGGGACATGAAATTAGAGAAGAA-GAACCTAACCATAAG----------TTGT
TGCTGATCTCGT--------CCTACTCCTACAGTCC--------TACCTAG---CTTGGATCGATGTCCATGGACGGCAA
GACCCCTGAT---CTGCTGCCT----------------------------------------------------------
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---------------------CTGAG------CGCG---GCCAAGAAGAAGATCCGGGATGCCGTCCCGCTGGCCTGCGG
ATGGGCGCTCCTCGACGCCTTCGCCACGGTCTGCGGCGTAGCAAGCGGCTACATTGCCGAGTACATCCATGTGTCGTGCA
GCCAGGTA--ACTACCTACC-----------CGTC----ACCCT-TCGGA-----------TGTTTCAC-------ATCG
CG-----ACCGATCCATCATGCGCTAAGCTGGCATGGTGAT-------CCTCTGCAGTCCTCCTTCATTCTGCCGTGCAT
CGAGCTGACGGACGAGGAGGCCGCCAGGCTAATCGCCCTCTGCGTCGGGATTCTGTGCTGCCCCCCATCCCAGGCGGCCG
CGGTGGCGCTGGCGCTGCTGCTCCCATGCCAGCGTCGCCGGGCCCGCCGGACCCTCGCCTACCTCGCGCTGGTGGTCACC
GTCCTCTTCCATTGCTTGTTCGCCAGCGCCGTCTGGGTCTTCCTCACCGCCGACCCAGGATACATCTTCGGCAGGATCTA
CTTCACCGCGGGCTTCTGCTTCTTCGTGGTGGGCGACCTCCTCAGCTTCCGGGCCCTTCT--GGGAGGTGATGGGTGGGG
CATGAA----GTACGTAGCCTATTTCTT---CTGATCATGTTCGTGGATCAGC------TCATGAGGTACTACT-GATGA
GAGCGTAGTTCTAGGGCGTACTCTAGAGTATGCATTGATTCTGCTGTGACGACTGATATGGAGTAGTGCC----------
--------------------ATATTTGCGAATCTAGTAACTGGTGTAGTGTTAATTAGTATCCAGATCGACTCTAGTAGT
AG------TTACTCCATTTGGGCAATGCTTTGCTGGCTAGTATATAATTAGACTGGATGGATTGGTAGATTGCGGTTATC
TTTGCTGTATTATTCAACCCTCTATGTATGCATGTGATCGTCAGACATGAGTTATAT-----CTTATATAGGTCCAGCTT
CGCTATAATTTGATGTTTCTGAAATTGCTGCTGCAGTGTATATCTATGCACACATTGTTGTTTCTGATGTTAAATTTTGT
TTTT-ATTCATTCCGGCAACCGCTGGCTTGTCCTCTC------GGCTGGGCTGCGTG-GGGTGCTCTCAGCTGAGATTGA
GTGACCCCCGTCCCGACCATGCTTGTGACCATGCAATCACAATTTGATGTATGGGACACCATGGTTTGAAATGCCCTCCT
GCCGATTGAGGTTCTTTTTTTATGCTTTTACC--TATGGAGATCCACACGCCGACACTTGACTTGTGGGAGCGCGCGGTT
TCACCACAACGCCGCGCGTGTAGCCACATATGGCGGATGTAATACAAAAATAAAGAACGCAATGGTCCTCCTTGAACCTT
CAAAAAATAAGTATCTTCTGATCGTGGAGTCGATATTTGGGTCACGAGTTATCAATCATCCAAAGAGTTGTGAAATTGTT
TCACAACTTACACATCCCGGTACGCCTCAAACTAATGGGGTATCCGAAAGGCATAATTGAACTTTGTTGGATGTGGTTCA
ACTAAGAGAGAAATACATATTTCAACCTTCTCAACTTCTAGTTTAATTTAGAACCCCAACTCCAAATACGGTTAGGACAC
CGTTTGATTAGCCGCATAGGACGATTGGAGGGTGGTTCTACATGATGTAGCATCTAGGCTAACTAGTCAACGTTGATGGC
A
>chr3D_198
GATCATGTTCGTGGATCAGCTCACCACGTCTGATGAGAGCGTGGAGTATGCATTAGTTCTGCTGTGACGATTCATGGAGT
AGTGCCGTATTTGCGAATCTAGTAGCTGGTGTAGTGTTAATATCTAGATCGAGTCCATTTGGTCAATGCTTTGCTGGCTA
TATAATTAGACTGGATAGATTGTGGCTATGTTTGATGTATTCGACCTTAATTTTCTCTATATGTGATCGTCAGACATGAG
TTATATGCTTATTTGGCACCAGTTTCGGTATAATGGATGTTGCTCCTTTTCAAGAAGAAAAAAAATTGATGTTGCTGAAA
TTGCTGCTGCAGTGTATAATTCGAGCTTTTAGTTTCACAGTTTTCCCATCAGACAACTTCCAACTTTTCCACAATTCTCA
CCTCACAACAACTTTCTCACGACTCACATAAGATTTTTCAAAATCCACAGCTCAACCAAACACACTTGATGTCATGTTGA
GGCTACAAATTCTTTTCTTATGACTAATGTGAGATCTTTATTGCTCATGTAAAGGGTTATATATAGTCAGCTAACATAAG
TTGCGAAATACAATCATGCGGCAGTTGCAACCAATAAATGGTGCGAGCCTCAGTCCGATCGTAGTTAACTAAGACATGAC
TAACCTATTCTAATATAGTCGCAAGTGCTAACTCGATATCCACTGAATCAAAGACACTATCTTCTAGTACAATCTGAAAA
AGGAATTACCTTGGTTTCAGTCTGCAAGACAAATATGATGCATCCACATATGTTACTACACTCCTTGTGGTTAACTGACC
GGGGAGTTTTTTCTTCTGAAACTCAGGGCAAAACCTGTGGCTTGTTTTCATTAATTAAGAAGGGGTTAAAGTTATGTATA
AACACCACAAAGGCGATAGAAAGAACAAAACAACTACTCTCGAGAAATCACACTAGTTGAAACCTTTTTTTGATGAAATT
ACTTGTATTACCCACATAGAGAATTACATTGTCTAACAACCACATCAAGCAAAATTTCTATCATAAGTGTAAATGGCTTA
CAAGAATTTTACTACATCGTGTGAGAGTAATACAAGAAATTTGTTGCTCCATGAATAATTAAACGTCGCACTGCATTACA
AAAGAAAAAAACTGAAAGAAAAATAAACCAAGCCGGAAGCCTGATTTTTTTCCTTTTCGGAGAGGCAGAGTTGTACTTCT
TGTGGAAGCAAATATGTGCCTCGCGAGAAGCAAATCTGTGCCTCTCGCAAAAGAAAGAAAAAAAGGTGTTTTTCCCTTTT
ACATGAGGCACAATTGTGCCTCTCATGAAAGCAAATATGTACCTGCACGAGAAGCAAATCTATGCTTCTCGAGGAAAAAA
CTGTGGTTTTTTTTACTTTTCCATGAGGCATAGCTAAGCCTCTCACAGATACAAAATCGTACCTCCATAAGAAGCAAATC
TTTATCTCTTTTGAAGAAAATAACACATTTTTTCTGTTTTCGAGAGGCATCTCTCGCAAAGCAAATCTGTGTCTCCACGA
GAAACAAAATTGTGTCTCTCGTGGAGAAAAAAACGTATTTTTTTCCTTTTTCGAGAGACACAGATGTGCCTCTCGCAGAA
GCAAACTTGTACGTCCATGAAAAACAAATCTGTGCCTCTTGCAGAAAAAAGAACATATTTTCTGCATAAAATTTTGATTT
TTTTTGCCAGAACCTAGGGAAAAGCGGGGAAAAACGAGAAGCTGAAAATCCGAAAAAAAATCATTTAAAACTCGAAAACA
TGTACAGAAAAAGAAAAAGGAAACCTGAAGAAGCAACCAGCACACGGCATATGGCGACGGCTGAGAAGCCAAAGTGACCC
TTGAGAGGCTCTCGCAGGGGTACCCCTCAATTAGTTACTCTCGGAGATCCCACGTCGTTTCATGGGCTCCCGAATAGACT
AGCGCTCGCACGATCTCTGAACGGGCTGCAGCCCATTAGTTTGATCGCTAGCTTCGGTTGTTCACGATCACGAGAGGGTA
TTTCCCGTCCGTATTGATTCCTATTATAAATCGCCTACGGGAAATAGCGGGTTGGCCCAAGACTTTAGCGTAGGTTTATC
TGTTGATGCTTTTTATCCTTTTTTCATCGTTATAGCCTGTTTTTTTATTTCTCTTTTCTTAGCTTTGTTCATATTTCATT
CTTTGGTTTTCTTCACTTTTTTTGGTATACGTTAGGGACATTTATTTGCAAACTTTAAACATTTTCAAAATACATGATTA
ATTTTATCTTATTATATCTTTTAATGTTTATTTTTCGCACATGCTGTACACTTTTTGAATACTTTAGGAAAAAGATTTAC
ACATGATAAAAAAATGCAAGTAGATAATTAACAAAAAAACTCAAATATACTCTTAGATGTCAAGTATTTTTCCACACATG
TCTACATTTTTTGTATACATTTATATATTTTTTGTATACATTAGAAATGTTTAGAAATTTTCGAATATATGATTAAGATT
TTTTTCAAATATATTTTTTGATGTCTACTTTTTTAATACATACTATACATTTTTCTTATACATGTAAAATATTTTTCTAC
AGTTTTAATCATTTTCATATGCAATATAAAATTACTTTACACATATGTTTTGATGTTTACTTTTCTCATACACATTGTAC
ATTTTTCGTATACACCTGAGTTTTTTATACATGTATAAAAAAATTAAATACATGTTTTGATGAAGATGTTTTATACACAT
TGTCTACTTTTTGTGTATATCAGGAACTTTTTTTAAACACGTTTAAGATTTTCTCAAATACATGATTAACTCTTTTTGAA
AAAGCAAAAGATTAAAAATATAATAAAAATTAGAAACAGAAAAGCTAAACAAAAGAAGAAGAAAAAAACATGAAGTCAGC
TACTGCCTCGCATGAGACGGTTGCCTTGAGGCGAGGCAAGCTAATGCCTCGCAGCAGGCGGGACATAGCTGTGCCCGTTC
GTAATATCTACTCGTGTATCAGTCAATTTATGAGAACGATTATTCAAATTTTAGAAAATCATTCATTTTAAACAAATTAT
ATATCGTAAAATGTTCATGAATTTGATGATGTTTGTGAAATCTAAAAAATCATGATTTGAAAAAAAATGTAAACTCGAAA
ATGGTTCTTGAATTTGAAAATAACTCACCAATCCAAAAAAATCACGTATTTGAAAAAACCTTGTGAGTTTCGAAAAAAAA
TAGTGAACTCGAAAATCCTAGATTAGCTAGATTTTCTTTAACTTCTAATAATTGGTTTGAGGAGCTCTTAATTGAAATTA
TACCGATTCTCATAAACAATGTATTGCTTATTTCCAATGAATAAAGTTTCGGGGGTTTTATAAAAAATGATGCAGAGGCC
GGGGTTTAACCTCCTCCTCAAAAAAAAATCCCTAAACACAGGCATGACCAGTGAGGACATAACTCCAGAACAACTTCCAT
GTAGCACAATGATGTGATATAATCCCAGTAAAAAAAAATGATGTGATATAATCAATCCTCAGCCGAGTTGAAATTCGCCC
AAGCATGGACGCCCATATGAATGATGCCTATAAAGTCACGAATCATGCCCCAAATGCAAATGCAGAGGCTGTATTCGAAA
AGAATGGGGGCAGCAATTCCTCGCCACTTTACTTGGTAGATACATATCGCCATTGGTGTTTTTCCTTCCTTTGACAAGGG
GTGGAATCGAACCGTTTGCACCTTTAGTGGAGCTTCACCTCCCATTCTTGACATAAGTTGATGAGTGGCTCCTCATAAAC
CTAATCGATGACGACAACAATGTAACCATCCAAGCGTCAGAAAATATTAACTAAACCAAACAATTCAGTCAAATCATTGT
ACTAGCTAGCTGATCCAAATGTGGATGAGCCACCGCCAGTCGTCGGAGTGGTACGGTGTGGAT---GGTGCACCGTGCAG
GAAGCCGGGGTTATTAT------TACATGCG-----------------TAGAAATCACACTAGCTATAGTTT----CTT-
AAACTGGCCGTGCAGCTAATCAGAACGAGCAGGCTAGC------------------------------------------
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>chr3A_198
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-------------------------------------TAACT--------------------------------------
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----------------------------------------------------GAACCAAACAATTCAGTCAAATCATTGT
A--AGCTAGCTCATCCAAATGTGGATGAGCCACCGCCAGTCGTTGGAGTGGTACGGTGTGGCTGCAGGTGCACCGTGCAG
GAAGCTGGGGTTATTAATTATTACATGTGTATGCAGTATGCTAGCTACTAGAAATCACACTAGCTATAGTTTGAAACTT-
AAACTGACCGTGCAGCTAATTAGAAAGAGCAGGCTAGCTAGCTTTTCACTGCC------CCGTATGCATGTGCGCGTGAT
AAGTT--TTCACGTTTTTGTCAACCTGCAAAGACACCGAGTGTGCCAC-CCTCATTGCCAAAGAGGGTATGGGTGCTTCG
CGGACGCAAACTTCGCGGTAGTTTCCTTTGTC-ACTGCCATTGCCATGAGAGGAACCGGA--CTCTCCTCCCTCTGTCTC
TGTGTGTGT----GCGCGCGCGCGCGCGTGTGTGTGTGGG----------------T-----------------------
---------CATGCTGCGGCTGCTCGACACGTAGTGGGTTTTGGGGCGGCCCCACGTCGCTGCTGCGGTGCC--------
----------------------------------CTCGGCCACTTAAACTCCC-CCCTCCACCACTAGCTAGCGTCGTCG
TTGCGCTCTGTAG--------TTGTAGCCCGAGCCCCTTCCAT-------------------------------------
--------------------------------------------------------------------------------
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-------------------CCAAGCTAACAAGCTAGG-AAGAACATC--TCCCTTGCATCCGACGAGCGA-----GTGA-
--------------------------------------------------------------------------------
------------------------------------------------------------CGGTGAGTCCCCTCCATCTC
CGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------C-A
TCTTGCTAATGTCATGTGCTT-------TTCCTCTTCTTCTTTCTCCTC------------------------------C
TCCTCTTCTTCTTCTTTTATGTCGAATGGGGGCATGAAATTAGAGAAG-A-GAAACTAACCATACG----------TTGT
TGCTGATCTCGTGATCTCATCCTACTCCTAC----------------CTAG---GTTG----GATCTCCATGGACGGCAA
GACGCCTCAT---CTGCTGCCT----------------------------------------------------------
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---------------------CTGAGTCTGAGCGAG---GCCAAAAAGAAGATCCGGGATGACGTCCCACTGGTCTGCGG
ATGGGCGCTCCTCAACGCCTTCGCCACGGTCTGCGGCGTAGCAAGCGGCTACATAGCCGAGTACATCCATGTCTCGTGCA
GCCAGGTA--ACCACCTACC-----------CGTGCACTA-CCCTTCCGA-----------TGCTTGAC-------ATTG
AG-----ACCGATCCATCATGTGCCAAGCTGGTATGGTG-T-------CCTCTGCAGTCCTCCTTCATTCTGCCCTGCAT
CGAGCTGACAGACGCGGAGGCCGCGAGGGTAATCGCCCTCTGCATCGGGATGATGTGCTGCGCCCCAACCCTGGCAGCCG
CGGCGGCGCTGGCGCTGCTGCTCCCATGCCGCCGTCGCCGGGCCCGCCGTGCCCTCGCCTACCTCGCCCTTGCGGTCACC
GTCCTCTTCCATTGCATGTACGCCAGCGCCGTCTGGATCTTCCTCGCCGCCGACCCAGGATACATCTTCGGCAGGATCTA
CTTCACCGCGGGCTTCTGCTTCATCGTGGTGGGCGACCTCCTCAGCTTCCGGGCCCTCCT--GGGAGGTGATGGGTGGGG
CATGAA----GTACGTAACCTATTTCTT---CTGATCATGTTCGTGGATCAGTGATATTCCACCAGGTACTGAT----GA
GAGCGTA------------------GAGTATGCATTCATTCTGCTGTGACGGTTGAT--GGAGTAGTGCC----------
--------------------GTAT---------------CTAGTGCAGTG----TTAATATCCAGATCGACTCTACTAGT
TAATTATATTACTCCATTTGGGCAATGCTC-GCTGGC---TATATAATTAGACTGGATCGATTCTAGTAGTTATCCTAT-
---------GTATTCCACCTTAATTTTCTCTATGTGATCGTCAGACATGAGTTATAT----GCT----------------
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>chr3B_357
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------------------------------------------------------------------TAGTTTGAAACTT-
AAACTGACCGTGCAGCTAATTCGAAAGAGCAGGCTAGCTAGCTTTTCACTGCC------CTGTATGCATGTGCGCGTGCT
ACGTTCATTCACGTTTTTGTCAACCTGCAAAGAAACTGAGTGTGCCA--CCTCGTTGCCAAAGAGGGTATGGGTGCTTCG
CGGACGCAA-CTTCGCGGTAGTTTCCTTTCTC-ACTGCCATTGCCATGAGATGAACCGGA--CTCTCCTCCCTGTGTGTG
TGCGCGCGCGCGCGT------------GTGTGT------------------GCAGCT-----------------------
---------CAGGCCGCGGCTGCTCGACACGTAGTGGGTGTTGAGGCAGGCCCACGCCGAT---------CGAGTTGCTT
TGCTTCTCTCTCGCTGCTGCTGCGCTCCTCGCGGCTCGGGCACTTAAACAGGAGCCGCTCCACCA---CCAGCGTGGTCG
TTGCGCTCTGTAGTTGTAGGCTTGTAGCTGGAGCCCCTTCAG--------------------------------------
--------------------------------------------------------------------------------
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--------AAGGAAGCACAGCAAGCTAGCAAGCTAGG-AAGAACCTCCCTCCCGTGCATCTGACCAGCGA-----GTGAC
GGTGACT-------------------------------------------------------------------------
------------------------------------------------------------CGGTGAGTCCCCTCCATCTG
CGG-----------------------------------------------------------------------------
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-----------------------------------------------------------------------------CCG
TCTTGCTA---------------------TGGTTTTTTTTTTCTTCCTC------------------------------T
TCTTCTTCTTCTTCTTTCATGTTGAATGGGGACATGAAATTAGAGAAG-AGGAACCTAACCATAAG----------TTGT
TGCTGATCTCGTGATCTCCTCCTACTGCTAC--TCC--------TACCTAG---CTTGGATCGATGTCCATGGATGGCAA
GACCCCTGAT---CTGCTGCCT----------------------------------------------------------
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---------------------CTGAG------CACG---GCCAAGAAGAAGATCCGCGATGGCGTCCCGCTGGTCTGCGC
ATGGGCGCTCATCAACACCTTCAGCACAGCAGTCAGCTACGTAGCC---------GCCGACTACATCCCCGTCTCGTGCA
GCCAGGTA--ACCACCTACC-----------CGTGTACTA-CCC-TCCGA-----------TCCTTGAC-------ATTT
CG-----ACCGATCCATCATGCGCCCTCTGCA-------------------CTGCAGTCCTCCTTCATTCTGTCGTGCAT
CGAGCTGACGGGCGCGGAGGAAGCCAGGGTAATCGCCCTCTGCATCGGGATTCTGTGCTGCGCCCCATTGCAGGCGGTCC
CAGCGGCGCTGGCGCTGCTGCTCCCATGCCGTCGTCGCTCGGCCCGCCGAGCCCTC------------------------
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>chr3D_357
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------------------------------------------------------------------TAGTTTGAAACTT-
AAACTGACCGTGCAGCTAATTAGAAAGAGCAGGCTAGCTAGCTTTTCACTGCC------CCGTATGCATGTGCGCGTGCT
ACGTTCATTCACGTTTTTGTCAACCTGCAAAGAAACTGAGTGTGCCA--CCTCGTTGCCAAAGAGGGTATGGGTGCTTCG
CGGACGCAA-CTTCGCGGTAGTTTCCTTTCTC-ACTGCCATTGCCATGAGATGAACCGGA--CTCTCCTCCCTGTGTGTG
CGTGTGTGT----GT------------GTGTGT------------------GCAGCT-----------------------
---------CAGGCCGCGGCTGCTCGACACGTAGTGGGTGTTGAGGCAGGCCCACGCCGAT---------CGAGTTGCTT
TGCTTCTCTCTCGCTGCTGCTGCGCTCCTCGCGGCTCGGGCACTTAAGCAGGAGCCGCTCCACCA---CTAGCGTGGTCG
TTGCGCTCTGTAG--------TTGTTGCTCGAGCCCCTTCAG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AAGGAACCACACCAAGCTAGCAAGCTAGG-AAGAACCTCCCTCCCGTGCATCTGACCAGCAA-----GTGA-
--------------------------------------------------------------------------------
------------------------------------------------------------CGGTGAGTCCCCTCCATCTG
CGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCG
TCCTGCTA---------------------TTCTTTCCTTCTTCCTCTTC------------------------------T
TCTTCTTTTTCTTCTTTCATGTTGAATGGGGACATGAAATTAGAGAAG-AGGAACCTAACCATAAG----------TTGT
TGCTGATCTCGTGATCTCCTCCTACTGCTAC--TCC--------TACCTAG---CTTGGATCGATGTCCATGGACGGCAA
GACCCCTGAT---CTGTTGGGTGAATAAGCCGCGGCGGTGCACTGGGCTCGACTGGCGTGTGTATGGGCGCGAGCCGGAC
GCGTCGGGTGCACCGGGTCCGCGGGGTTGGTGTGTGTGTGTACGTGTGGTGCACGGGGTGACCGTGCGGGTAGACACCGT
GCATGTGTGTGTGTGTAGACTAGGTCAGGACATGATCCGAGCGCAGCGGGGGCGCGTGATCGTTGAGGGCTCGGCGCAGG
GCGCGCGCGCGGAGCGCGTCGCGGGGCGTGCAGAGCGGGCCGATCAGAGCGCGCGAGTGGGCAGGAGCGAGTGGGTCGTT
GCCCAGCTTAGCCCGCGTATAAAGCTCACGGAGGTGATCATTGTACTGGGTGGTGTGTGCTGAGTTCGAGCTCAGGGAAA
TTGGCGTTGTTGCGCCGGGAAAAACCACCGTGTCTCCGTGTCCTTCTTCCTCTTCTGATCTTCTTCTTCTCGTTGGTTCG
AGCCACGGCGTCACAGAGAGAGTAGAGAGCTAGGGCGAGGGCATAGCCACGGCAACAAACAGTTGGCATCAGAGCCACGT
TCTGGTCAGGGCGCGCCGGCGATGTCGATCGTCCCGTACGCTGGCGGAACAGGCGGGTCGCTGGCGGAACAGGCGGGTCG
CTGCCGCAGTCGGTGCCACTGCTCACCGGCGACAACTACACGACATGGTCGATCAAGGTGGAGGCGAACCTTGATGCGGC
CGGGCTGTGGGAGGCGGTGGTGGTGCCGGAGGACGCGGTGGCGGCCGTCATCGCGAAGAAGGACAAGCCTGCGCGCGCCT
ACCTGCTCGGTGCACTCGCCGAGGACCTTCTGCTGCAGGTCGCGTCGAAGAAGACGGCGGCCGAGGTGTGGGCGAGTTTG
AAGGCCAGGTTTGTGGGCGCGGACCGCGTGCGCGCGGCGCGGCTCGGCACGGTCCGGGGGGAATTTGAGCTCCTGCGCAT
GGCGGAGTCACAGTCCCTGGACGCGTTCGCCGGGAGGCTTGGTGGCATGGCGGCGCGCTACGCGGCGCTGGGCTCGACCC
TGGAGGACGCGGCGCTTGTCAAGAAGCTGCTCGACTCGGTGCCGAACCGTTTGTACGCGGCGGTGGCAGGGATCGAGCAG
TTCTGCGACGTCGGCACGATGCTGTTCGAGGACGCGTTGGGGCGGCTGAAGGCATTTGACGAGCGGCTGCGGCGACGCGA
TCAGGCAGGCGGCGAGGGCGCGGACGGGCAGCTGCTGTACACCGCGGCACAGTGGCGTGCGCGCGAGCGGCGTCGGAGCG
GTGCACGCGGAGACGACGACGACGACGTGCGCAGCGAGGCGTCGCGCTTCGGCGGGAACCGGCGCGGTCGCTGCTACAAG
TGCGGCGAACGGGGGCATTTCAAGCGCGAGTGCCCGCAGCTCAAGAAGGCGCCGGCGGCGGAGCGAGCCCTGCTCGTGGA
CGATGTCGAGGACGCCGGGCTGCTCTGAGCCGCGGCTTAGGGCGCGAGTGTTGGGTGAATAAGCCGCGGCGGTGCACTGG
GCTCGACTGGCGTGTGTATGGGCGCGAGCCGGACGCGTCGGGGGCACCGGGTCCGCGGGGTTGGTGTGCGTGTGTGTACG
TGTGGTGCACGAGGTGACCGTGCGGGTAGACACCGTGCATGTGTGTGTGTAGACTAGGTCAGGACGTGATCCGAGCGCAG
CGGGGGCGCGTGATCGTTGAGGGCTCGGCGCAGGGCGCGCGCGCGGAGCGCATCGCGGGGCGTGCAGAGCGGGCTGATCA
GAGCGCGCGAGTGGGCAGGAGCGAGTGGGTCGTTGCCCAGCTTAGCCCGCGTATAAAGCTCACGGAGGTGATCATTGTAC
TGGGTGGTGTGTGCTGAGTTCGAGCTCAGGGAAATTGGCGTTGTTGCGCCGGGAAAAACCACCGTGTCTCCGTGTCCTTC
TTCCTCCTCTGATCTTCTTCTTCTCGTTGGTTCGAGCCACGGCGTCAGAGAGAGAGTAGAGAGCTAGGGCGAGGGCATAG
CCACGGCAGCAACATGATCTGCTGCCTCTGAGCGCG---GCCAAGAAGAAGATCCGCGATGGCGTCCCGCTGGTCTGCGC
ATGGGCGCTCATCAACACCTTCAGCACAGCAGTCAGCTACGTAGCC---------GTCGACTACATCCCCGTCTCGTGCA
GCCAGGTA--ACCACCCACC-----------AGTGTACTACCCC-TCCGA-----------TACTTGAC-------ATTT
CG-----ACCGATCCATCATGCGCCCTCTGCA-------------------CTGCAGTCCTCCTTCATTCTGCCGTGCAT
AGAGCTGACGGACGCGGAGGAAGCCAGAGTAATCGCCCTCTCCATCGGGATGCTGTGCTGCGCCCCATTACAGGCGGCCG
CCGCGGCGCTGGCGCTGCTGCTCCCATGCCGCCGTCGCTCTGCCCGCCGTGCCCTCGTCTACCTCGCGCTCGCGGTCACC
GTCCTCTTCCATTGCATGAGCGCCAGCACCGTCTGGATCTTCCTCGCCGCCGACCCAGGATACATCTTCGGCAGGATCTA
CTTCACTGCGGGGTTCTGCTTCATCGTGGTGTGCGACCTCCTCAGCTTCCGGGCCCTCCT--GGGAGGTGATGGGTGGGG
CATGAA----GTACGTGGCCTATTTCTT---CTGATCATGTTCGTGGATCAGC------CCACCAGGTACTGAT----GA
GAGCGTA------------------GAGTATGCATTCATTCTGCTGTGACGATTGAT--GGAGTGGTGCC----------
--------------------GTAT---------------CTAGTGCAGTG----TTAATATCCAGATCGACTCTACTAGT
TAATTATATTACTCCATTTGGGCAATGCTC-GCTGGC---TATATAATTAGACTGGATGGATTG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>chr3D_357
--------------------------------------------------------------------------------
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------------------------------------------------------------------TAGTTTGAAACTTG
AAACTGACCGTGCAACTCATTAGAAAGAGCAGGCTAGCTAGGTTTTCACTGCGCCGTATCCGTATGCATGTGCGCGTGCT
AAGTT--TTCACGTTTTTGTCAACCTGCAAAGAAATTGAGTGTGCCACACCTCATTGCCAAAGAGGGTATGGGTGCTTCG
CGGACGCAA-CTTCGCGGTAGTTTCCTTCGT-------CACTGCCATGAGATGAACCGGA--CACTCCTTCCTGTGTGTG
TGTGTGTTTTTGTGCAG---------------------------------------------------------------
----------------------------------------------------CACGCCGAT---------CGAGTCGCTT
TGCTTCTCTCTCTC-GCTGCTGCGCTCGTCGCCGCTCGGGCACTTCAACAGGAGCCGCTCCACCA---CTAGCGTGGTCG
TTGCACTCTGTGG--------TTGTAGCTCGAGCCCCTTCAG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AAGGAAGCACAGCAAGCTAGCAAGCTAGGAAAGAACCTCCCTCCCGTGCATCTGACCAGCGA-----GTGAC
GGTGAGTCCACTCCATCTCCGGGACGTGGATTTTTAGAACAGCTGCACCCCGGCTTGGTATGCTGACTGTCCAATATTGC
TTTAAGATCTGTGCAACACAACTAACTTTTCATATGAAAACTTCTCTTTTCAGCGAGTGACGGTGAGTCCACTCCATCTC
CGGGACGTGGATTTTTAGAACAGCTGCACCCCGGCTCTGGTATCCTGACTGTCCAATATTGCTTTAAGATCTGTGCAACA
CAACTAACTTTCCATATGAAAATTTCTCTTTTTTGTTTCTCTCACATAAAAGATGTCTTGAAGTTCAAACCTTTGCAGCA
TGGCAAAGCTTTCCATCTAGAATCTAGGATAAATCTTTCAGGATTTTTTGTCAAACATAATATACAAAAAATGATTTTTT
AGATTAAAAAATCATTTTTTGTATATTTATGTTTGACAAAAAATCCTGAAAGATTTATCCTAGATTCTAGATAGAAAACT
TTGCTACGCTGCAAAGGTTTGAACTTCAAAATATGTTTTATGTGAGAGAAACAAAAAAGAAAAATGTGTTTGCATGAATC
GCCATGCGCAGAATAGATGGCTAGATAGAGAGGGCCAGGGTGCAGCTGTTTTATTTTATATTTTCGTACATCTCCGGCCG
TTTTGCTAA---------------------------TGTTCTTTTCTTC------------------------------A
TCCACTTCTTCTTTTTTCATGTTGAACGGGGACATGAAATTAGAGAGG-AGGAACCTAACCATAAG----------TTGT
TGCTGATCTCGTGATCTCCTCCTACTGCTAGTCTGCTACTTACGTACCTAG---CTTGGATCGATGTCCATGGACGGCAA
GACCCCTGAT---CTGCTGCCT----------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------CTGAG------CGCG---GC---CAAGAAGATCCGGGATGCCGTCCCGCTGGTCTGCGG
ATGGACGCTTCTCAACACCTTCAGCACAGCAGTCGGCTACATAGCC---------GTCGACTACATCCATGTCTCATGCA
GCCAGGTA--ACCACCTACC-----------CGTGTACTG-CCC-TCCGA-----------TGCTTGAC-------ATTT
CG-----ACCGA------------------------------------------------TCCTTCATTCTGCCGTGCAT
CGAGCTGACGGACGCGGAGGAAGCCAGGGTAAGCGCCCTCTGGATCGGGATGCTGTGCTGCGCCTCGTTACAGGCGGCCG
CGGCGGCGCTGGCACTGCTGCTACCAGGCCACCGTCGCT-GGCCCGCTGTGCCGTCGCCTACCTCGCGCTCGCGGTCACC
GTCCTCGACCATTGCATGTACGCCAGCACCGTTTGGGTCTTCCTCGCCGCCGACCCAGATTT-ATCTTCGGCAGGATCTA
CTTCACCGCGGGCTTCTGCTTCTTCGTGGTGGGCGACCTCCTCAGCTTCCGGGCCCTCCT--GGGAGGTGATGGGTGGGG
CATGAA----GTACGTAGCCTATTTCTT---CTGATCATGTTCG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>chr3D_400
--------------------------------------------------------------------------------
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------------------------------AGGCTAGCTAGGTTTTCACTGCGCCGTATCCGTATGCATGTGCGCGTGCT
AAGTT--TTCACGTTTTTGTCAACCTGCAAAGAAACTGAGTGTGCCACACCTCATTGCCAAAGAGGGTATGGGTGCTTCG
AGGACGCAA-CTTCGCGGTAGGTTCCTTTTTTTACTGCCATTGCCATGAGATGAACCTCTGGCACTCCTCCCTCTGTGTG
TGTGTGTGT----GT------------CAGTGTGTGTGCGCGCGCGCGCGCGCAGCT-----------------------
---------CATGCTGCGGCTGCTCGACACGTAGTTGGTTTTGGGGCGGCCCCACGTCGCTGCTGCGGTGCC--------
----------------------------------CTCGGCCACTTAAACTCCC-CCCTCCACCTCTAGCTAGCGTCGTCG
TAGCACTCTGTAG--------TTGTAGCTCGAGCCCCTTCAG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AAGGAAGCACAGCAAGCTAGCAAGCTAGG-AAGAACCTCCCTCCCGTGCATCTGACCAGCGA-----GTGAC
GG------------------------------------------------------------------------------
------------------------------------------------------------CGGTGAGTCCCCTCCATCTC
CGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCG
TCTTGTTAATGTT------------------------------CTTTTC------------------------------T
TCTTCCTCTTCTTCTTTCATGTTGAATGGGGACATGAAATTAGAGAAG-AGGAACCTAACCATAAG----------TTGT
TGCTGATCTCGTGATCTCCTCCTACTCCCAC----------------CTAG---CTTG----GATCTCCATGGACGGCAA
GACGCCTCAT---CTGCTGCCT----------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------CTGAGTCTGAGCGAG---GCCAAAAAGAAGATCCGGGATGACGTCCCACTGGTCTGCGG
ATGGGCGCTCCTCAACGCCTTCGCCACGCTCTGCGGCGTAGCAAGCGGCTACATAGCCGAGTACATCCATGTGTCGTGCA
GCCAGGTA--ACTACCTACC-----------CGTGTACTACCCT-TCGGA-----------TGTTTCAC-------ATCG
CG-----ACCGATCCATCATGCGCCAAGCTGGTATGGTG-TT------CCTCTGCAGTCCTCCTTCATTCTGCCGTGCAT
CGAGCTGACGGACGCGGAGGCCGCCAGGCTAATCGCCCTCTGCGTCGGGATGCTGTGCTGCGCCCCATCCCAGGCGGCCG
CGGCGGCGCTGGCGCTGCTGCTCCCATGCCAGCGTCGCCGGGCCCGCCGGACCCTCGCCTACCTCGCGCTGGCGGTCACC
ATCCTCTTCCATTGCTTGTTCGCCAGCACCGTGTGGGTCTTCCTCGCCGCCGACCCAGGATACATCTTCGGCAGGATCTA
CTTCACCGCGGGCTTCTGCTTCTTCGTGGTGGCCGACCTCCTCAGCTTCCGGGCCCTCCT--GGGAGGTGATGGGTGGGG
CATCAA----GTACGTAGCCTATTTCTT---CTGATCATGTTCGTGGATCAGC------TCACCACGTACTGAT----GA
GAGCGTG------------------GAGTATGCATTAATTCTGCTGTGACGATTGAT--GGACTAGTGCC----------
--------------------GTATTTGCGAATCTAGTAGCTGATGTAGTGTTAATTATTATCCAGATTGACTCTACTAGT
ATGTACT-------CATTCGGGTAATGCTTTGCTGGC---TATATAATTAGACTGGGTGGATTG------TGC--TTATC
TTTGCTGTAGTATTCGACCTTCTCTCTATGCATGTGATGGTCAGACATGAGTTATATATATGCTTATATAGGTCCAGCTT
CGCTATAATTAGATGTTTCTAAAATTGCTGCTGCAGTGTATATCTATGCACACAT-GTTGTTTCTGATGTTAAATTTTGT
TTTTCATTCATTCCGGCAACCGCTGGCTTGTCCTCTC------GGCTGGGCTGCGTG-GGGTGCTCTCAGCTGAGATTGA
GTGACCCCCGTCGCGACCATGCTTGTGACCATGCAATCACAATTTGATGTATGGGACACCATGGTTTGGAATGCCCTCCT
GCCGATTGAGTTTCTTTTTTTATGCTTTTTCCTATATGGGGATCCACACGCCGTCACTTGACTTGTGGGAGCG----GTT
TCACCAAAACACCGTGCGTGTAGCCACATATGGTGGATGTAATACAAAAATAAAGAACGCAATGATCCTCCTTCATCCTT
CAAAAAATAAGTTTCTTCTGATCGTGGAGTCAATATTTAGCTCATGAGTTATCAATCATGCAAAGAGTTGTGGAATTGTT
CCACAACTTACACATCCCGGAACGCCTCAAACTAATGGGGTATCCGAAAGGCGTAATTGAACTTTGTTGGACATGGTCG-
ACTAAGAGAGAAATACATATTTCAACCTTATCAACTTCTAGTTTAATTTACAACCCCAACTCCAAATATGGTTAGGGCAA
CGTTCAATTAGCCGCATAGGACGATTGGATGGTGGTTCTGCATGATGTAGCATCTAGGCTAACTAGTCAAGGTTGATGGC
A
>chr5B_598
TGTGTGTGTGTGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------GT----GT------------GTGTGT------------------GCAGCT-----------------------
---------CAGGCTGCGGCTGCTCGACACGTAGTGGGTTTTGGGGCGGCCCCACGTCGCT---------CC--------
----------------------------------CTCGGCCACTTAAACTCCC-CCCCTCCACCA---TTAGCTA-----
----GCTCTGTAG--------TTGCAGCTCGAGCACCTTGAG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGGGAAGCACACCAAGCTAACAAGCTAGG-AAGAGAAAC--TCCCTTGCATCCGACCAGCGCGTGACGTGA-
--------------------------------------------------------------------------------
------------------------------------------------------------CGGTGAGTCCCCTCCATCTC
CGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCA
TCTTGCTACTGTCTTCTTCTTCTT------CTTCTTCTTCTTCTTCTTC------------------------------T
TCTTCTTCTTCTTCTTTCATGTCGAATAGGGACATGAAATTAGAGAAG-AGGAAC-TAACCATAACCATACGTTAATTGT
TGCTGATCTCGTGATCTCGTCCTACTCCTAC----------------CTAGTAGCTTG----GATCTCCATGGACGGCAA
AACGCCTCAT---CGGCTGCCT----------------------------------------------------------
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---------------------CC------GAGCGAG---GCCAACAAGGAGATCCGGGATGACGTCCCACTGGTCTGCGC
ATGGGCGCTCATCAACGCCTTCAGCATCGTCGTCGGAGCAGCAAGCGGCTGCGTAGCCGCCTACCTCCATGTCTCGTGCA
GCCAGGTATACCTACCTACC-----------CGTA----CCC-------CTCGGATGCTTTTGCTTGGCATT----ATTG
CG-----AACGATCCATCATGCGCCAAGCTGGTATGGTG-TTCCTCTTCCTCTGCAGTCCTCCTTCATTCTGCCGTGCAT
CGAGCTGACGGACGCGGAGAAAACCAGGCTAATCGCCCTCTTCATCGGGATGTTGTGCTGCGCCGCGTCCCAGGCGGCCG
CGGCCGCGCCGGCGCTGCTGCTCCCACGCCGTCGTCGCTGGGCCCGCCGTGCCCTCGCCTACCTCGCGCTCGCGGTCACC
ATCCTCTTCCATTGCATGTACGCCAGTTTAGTCTGGATCCTCCTCGCCGCCGACCCAGGACACATGTCCGGCAGGATCTA
CTACACCGTGATCATCTGCTTCATGGTGGTGTGCGACCTCCTGAGCTGCGTGGCCCTCCTCCTGGAGGTGATGAGGCGGC
---GCAAGCAGTGCGTAGCCTAGCCTGTCAACTGATCATGTTCGTGGATCAGC------TCATGAGGTACCGATCGATGA
GAGCGTACTTCTAGGGAATAACGTAAATTATGCATTAAGTCTGCTGTGACGATTGAT--GGAGTAGTGCCGTAGTATTGT
ATTTGTGAATCTAGCTAGCAGTAA---------------CTGGTTTAGTG----TTAATATCCAGATCGACTCTAGTAGC
---------TACTCCATTTGGGCTATATA-TGCTGGC---TATATAATTAGACTGGGTGGATTG------TGTGGTTATG
TTTGATGTATTAATTCCGGC---TTTTCTCTATGTGATCGTTAGACATGAGTTCTATATATGCTTAAATTGATAT---TG
CGGTGTAATTTGGCGTTGCTGAAATCGT---TGCAGTGTAATTCCATGCACACAT-GCTGTT-CTGGTGTTAAAAATTGT
TTCTCATTCATTCCGGCAACCGCTAGCGCGCGTATCCTCTAGAGGCTGGGCTGCGTGCGGGTGCTCTCGGCTGAGATTGA
GTGACCCCTGTCCCGACCA-------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5A_627
GCTGCGG-------------------------------------------------------------------------
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--------------------TGCTCGACACGTAGTGGGTTTTGGGGCGGCCCCATGTCGCT---------CC--------
----------------------------------TTCGGCCACTTAAACTCCC-TCCCTCCACCA---CTAGCTA-----
----GCTCTGTAG--------TTGCAGCTCGAGCACCTTCAG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGGGAAGCACACCAAGCTAACAAGCTAGG-AAGAAAG----TCCCTTGCATCCGACCAGCGAGTGACGTGA-
--------------------------------------------------------------------------------
------------------------------------------------------------CGGTGAGTCCCCTCCATCTC
CGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCA
TCTTGCTAATGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC------------------------------T
TCTTCTTCTTCTTCTTTCATGTTGAATGGGGACATGAAATTAGAGAGG-AGGAAC-TAACCATACG----------TTGT
TGCTGATCTCGT--------CCTACTCCTGC----------------CTAGTAGCCTG----GATCTCCATGGACGGCAA
GACGCCTCAT---CTGCTGCCT----------------------------------------------------------
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---------------------CC------GAGCGAG---GCCAAAAAGGAGATCCGGGATGACGTCCCACTGGTCTGCGC
ATGGGCGCTCATCAACGCCTTCAGCATCGTCTCCGGAGCAGCAAGCGGCTACATAGCCGCCTACTTCCGTATCGCGTGCA
TCCAGGTA--ACCAGCTACCTGCCCGTGTACAGTGTACTACCCC-TCGGA-----------TGCTTGACATTATCGATCG
CG-----ACCGATCCATCATGCGCCAAGCTGGTATGGTG-TTCCTCTTCCTCTGCAGTCCTCCTTCATTCTGCCGTGCAT
CCAGCTGACGGACGCGGAGGAAGCCAGGCTAATCGCCCTCTTCGTCGGGATGCTGTGCTGCGCCGCATCCCAGGCGGCCG
CGGCGGCGCTGGCGCTGCTGCTCCCGCGCCACCGTCGCTGGCCCCGCCGTGCCCTCGCCTACCTCGCGCTCGCGGTCACC
ATCCTCTTCCATTGCATGTACGCCAGCACCATCTGGATCCTCCACGCCGCCGACTCAGGATACATCTTGGGCACGATCTA
CTACACCGTGATCATCTGCTTCATGGTGGTGTGCGACCTCCTCAGCTGCGTGGCCCTCCTCCTGGAGGTGATGGGCGGCG
CAAGCATGCAGTGCGTAGCCTA----------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_669
--------------------------------------------------------------------------------
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--------------------------------------------------------TCGCTGGTGCGGTGCC--------
----------------------------------CTCGGCCACTTAAACTCCC-CCCCTTTGTCTCAAAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAGGGAAGCACACCAAGCTAACAAGCTAGG-AAGAAACTCCCT----TGCATCCGACCA--GCGTGACGTGA-
--------------------------------------------------------------------------------
------------------------------------------------------------CGGTGAGTCCCCTCCATCTC
TGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CCA
TCTTGCTAATGTCTTCTTCGTCTTCTTCT-----------TTCTTCTTC------------------------------T
TCTTCTTCTTCTTCTTTCATGTCGAATAGGGACATGAAATTAGAGAAG-AGGAAC-TAACCATAACCATACGTTAATTGT
TGCTGATCTCG--------TCCTACTCCTAC----------------CTAGTAGCTTG----GATCTCCATGGACGGCAC
GACGCCTCATCATCTGCTGCCT----------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------CC------GAGCGAG---GCCAAAAAGGAGATCCGGGATGACGTCCCACTGGTCTGCGC
ATGGGCTCTCATCAACGCCTTCAGCATCGTCTGCGGCGCAGCAAGCGGATACATAGCCGCCTACATCCATGTCTCGTGCA
GCCAGGTA--CCTACCTACC-----------CGTG----CCCCTCGGAACTCGGATGCTTTTGCTTGACATT----ATTG
CCATGCCACCGATCCATCATGCGCCAAGCTGGTATGGTG-TTCCTCTTCCTCTGCAGTCCTCCTTCATTCTGCCGTGCAT
CCAGCTGACGGACGCGGCGAAAGCCAGGCTAATCGCGCTCTTCATCGGGATGTTGTGCTGCGCCGCATCCCAGGCGGCCG
CGGCCGCGCCGGCGCTGCTGCTCCCACGCCGCCGTCGCTGGGCCCGCCGTGCCCTCGCCTACCTCGCGCTCGCGGTCACC
ATCCTCTTCCATTGCATGTACGCCAGTTTAGTCTGGATCCTCCTCGCCGCCGACCCAGGACACATGTCCGGCAGGATCTA
CTACACCGTGATCATCTGCTTCATGGTGGTGTGCGACCTCCTGAGCTGCGTGGCCCTCCTCCTGGAGGTGATGGGGCGGC
---GCAAGCAGTGCGTAGCCTA----------------------------------------------------------
--------------------------------------------------------------------------------
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-
>chr3D_921
TGAATA--------------------------------------------------------------------------
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---------------------------------------TTAGAGAGG-G-GGAACTAACC-TACG----------TTGT
TGCTTATCTCGT--------CCTACTCCTAC----------------CTAG---CTTG----GATCTCCATGGACGCCAA
GACGCCTCGT---CCACTGCCT----------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------CTGAG------CGCGGCCGCCGAAAAGAAGATCCGGGATGATGTCCCACTGGTCAGCGG
ATGGGCGCTCATCAACGCCTTCGCCATCGCCTGCGGCCAAGCATCCAGCTACATATCTGTCCACTTCCACCTCCCGTGCA
TCCAGGTA--ACTAACTAGCTACCCGTGTACGGTGTACTGCCCC-TCGGC-----------TGCTTGAC-------ATTT
CG-----ACTGATCCATGACGCGCCAAGCTGGTATGGTG---------------CAGTCGTCGTTCATTCTGCGGTGCGT
CAAGCTGACGGACGCGGAGGCCGCCAGGGAAAGCGCCCTCTAGATCGGGAGGATGTGCTGCGCCGCATCCCAGGCGGCCG
CGGCGGCGCTGGCGCTGCTGCTCCCATGCCGCCGTCGCTGGGCTCGCCGTGCCCTCTCCTACCTCGCGCACGCGGTCACC
ATCCTCGTCCATTGCATGTATGCCAGGGCCGTCTGGGTCCTCCTCGCCGCCGACCTAGGATACACCGTCGGCAGGGTCTT
TTACAACGTGGTCATCTGCGTCATGGTGGTGTGCGACCTGGGCTGCCTGGCCCTCCTCCT--TGGAGGTGATGGGTGGGG
CAAGCA----GTACGCAGCCT-----------------------------------------------------------
--------------------------------------------------------------------------------
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-
>SNPs
-SS-S-SSS-S--S-SSS-S-SSSSSSS--S-SSSSSSSSSS-SSSS-SSS-S---SSSSSS-SSSSSS-SSS-SSSSSS
SSSS-SSSSSSSSS-S-SS-SS-SSSSS-S-SSSS-SS--S-S--SS-SSSSSSSSSS--SS-SS--SSS-SS---SSSS
--S--SS--S-SSS-S-SSSSSSSS-S-SSSSSSSSS-------------------------------------------
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----------------S---------------------------------------------------------------
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--------------------------------------S-----------------------------------------
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-------------------------------S----------------------------S-S-----------------
----------------------S---------------------S-----------------------------------
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----S-------------------------------S-------------------------------------------
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------------------S-------------------------------------------------------------
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------------S-------------------------------------------------------------------
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--------------S-----------------------------------------------------------------
-S------------------------------------------------------------------------------
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-S--------------------S--------S-------S----------------------------------------
-------------------------------------------------S------------------------------
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-------S-----S---------------------------------------------------S-----S--------
---------------------------------------------------------------SS---------------
----------------------------------------S---------------------------------------
---------------------------------------------------------------------------S----
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---------------------------------------S--------------------------S-------------
----------------S---------------------------------------------------------------
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----------------------------------------------------------S----S----------------
-------------------------S------------------------------------------------------
-----------------S----------------------------------------S---------------------
------S-------------------------------------------------------------------------
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----------------------------------------------------------------------S---------
----------S-S-------------------------------------------------------------------
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>forward_4301
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-----------------------------------------GTGTGTCTGTGTGTGTGTGC-------------------
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>reverse_8464
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---------------------------------------------------------------TGCGTACTGATGAGAGC
GTG-----------------------------------------------------------------------------
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