>input_sequence_73698
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----------------------------------------------------------------------------ATGT
CGCCGTCTCACTGCCGCCGACTGCTGGCGGTGGCTCTGGTCTGCGTACTGCTCCTGTGGCGGCCGGCCGGAGCGGCTGAG
TACCCGGTCGGCGACGGCATCAACGGCTGGGACACCGGCACCAACTACGCCTCCTGGGCGCAGAGCCGCTCCTTCGCCCC
CGGCGACGTCCTAGGTCAGTATCTCCATCAACCTAGATATATGGGCAATTAGCTAACTAGCCAGGCGCATGGTATGATTC
GATCGATAAATTTGGGGGTGGCTGGTCCACGCAGTGTTCGAGTACGTCAAGAGCCAGCACAACGTCTACCAGGTGACGGA
GGCCGCTTACCGGACGTGCGACGCCTCCGCGGCCGGCGCCGTGCTCGCCACCTACGACACCGGCTTCGACAAGGTTCCTC
TCCCCGAGGCCAAGAGCTACTGGTTCATCTGCGAGATCTCCGGCCACTGCATGGGCGGCATGAAGCTCGCCGTCAACGTC
TCCGCCGGGCCTTCGGGGGGCGGGGCACCGGCGCCCGACGCTCCGCCATCTCCATCGGCCGGGGCCGCCTGCCGCAGCAG
CTGGGTGGCCTGGGCCGCCGGGTTGGTGGTGCTCGCCGCGGTGCACGTCTTGGTCAATTGA-------------------
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>chr7D_1_TraesCS7D01G527600
TCGTTGGGGACATATATGAATCTTCTTTATACAACGTCACCACCGCTGCCGCCGGAACGAAGACTATGTACAGCCGAAAA
ACCTAAGCTACTTGGGTCTAACCTAAAGCTACACGATCCACACACATACATCCGGCGACCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAA
GGAACGAGGCGGAGGGACTCTCCTGGCGGCGGCTAGGGTTTCTTGATTAATATGAGTTTCCAATGTCTGAGAGAAGAGAA
GCACACTACCATTTCCACTCGAAAGCTTCACCTGCT-CTTTCAGCGCAACCAATTCCTGGTAGCAAAAAGGAAGTTCATC
TTGGCCTCTTGTCTGCCAATCACAACAAGATT-----TCCAAGTCAAATGAAATAAAATA-----AAAACACAAGACACA
AAACTACACACAACACGAAGGAGAAACGGTCAGATCAACATGTGGAAAAATTAACCTTGTCCATGTACGGCGTCCTTCGT
TCCGCTCCATATGTCGTGGAGCTAGAACAAGTTGTCTGCTGGTGCATCATA-----TACCATATACGCTTTGACATCATC
TCTCATCACATCT-GCTATTACTTGCTCCGTTAATGGACCCGATCAATCA-TGGATCACATAATCATCATCGATCATGTC
ACGCGCTCGAGAAGAACGGGTCCACGGCCGCCGGCCGGTCACCTTGTCACGTCGACTAGTGGGCATACATATATGGCCAC
AAAGCCACGAGACTAGTGTCCATCACCGCACGTCAACGCCATCTCCATTAC------------------CTACCTAACCC
TGTCATCGAGCTCGATCAACAAGTTTTGTCAAGAAACATAGGCTCGATCAGCAAGCATCCGTCGCTCCGATCCGATATGT
CGCCGTCTCACTGCCGCCGACTGCTGGCGGTGGCTCTGGTCTGCGTACTGCTCCTGTGGCGGCCGGCCGGAGCGGCTGAG
TACCCGGTCGGCGACGGCATCAACGGCTGGGACACCGGCACCAACTACGCCTCCTGGGCGCAGAGCCGCTCCTTCGCCCC
CGGCGACGTCCTAGGTCAGTATCTCCATCAACCTAGATATATGGGCAATTAGCTAACTAGCCAGGCGCATGGTATGATTC
GATCGATAAATTTGGGGGTGGCTGGTCCACGCAGTGTTCGAGTACGTCAAGAGCCAGCACAACGTCTACCAGGTGACGGA
GGCCGCTTACCGGACGTGCGACGCCTCCGCGGCCGGCGCCGTGCTCGCCACCTACGACACCGGCTTCGACAAGGTTCCTC
TCCCCGAGGCCAAGAGCTACTGGTTCATCTGCGAGATCTCCGGCCACTGCATGGGCGGCATGAAGCTCGCCGTCAACGTC
TCCGCCGGGCCTTCGGGGGGCGGGGCACCGGCGCCCGACGCTCCGCCATCTCCATCGGCCGGGGCCGCCTGCCGCAGCAG
CTGGGTGGCCTGGGCCGCCGGGTTGGTGGTGCTCGCCGCGGTGCACGTCTTGGTCAATTGAGCTAGCTAGTTTGACCTGT
TCAAAGTTGGCTCATGTACG---CTAGCTGTTTATTCTTCTGTCCCTGTCCAATTTTTGTATTTAATTTATGATTTTTTG
CGAATCAGTCATGATTCACAGATACAACATTCAATTCAATTGCAGCCACTGTTTGCCACAAACATTTGCATGAAATTTTA
ATGTTGAATAGAATTTATGCGGCAAGTTTTTG----TTTTCCACCCTACCTATCTAGCTCTGTTCAACCACCAATTAGTC
TTCGTCATTTTAAGTTTTGGCATATGCAAAACC-ATGTCAAATCCAGCCAGAGTGCAAACTCCAATTACTCTTTTTGCCA
TAAAAAGTTT-TCACACTGTCAATGAGAAGAGAAGTTGTTATACAAACAAAGGTGCAAACCTGTGCGCCGGGATAACATG
ATAGCCGTTCAGATAGTGCTTCCATTACATGCCAAAAGTTCTTTTGTTGCTTAGATTTTTTTTTTTGCTGCTTAGTTCTA
AACAGAACAAACCCATTGCTTACCACAATTTGACAATTGTCTAAGTAAAAG-AAAACATGCTTTATAAGTATAATGCACA
TGTGGCGGCAGCACTATTAATAATATGAGCATAACAGGGAAGAAGCAGGAAAATGGTGGTAAAAATTCGAAAGTGCTATT
GCGAGCTCGAGCTCACATGATTTTGAGTGAACAGTAAATTCCAAAAAAATAGTAACAACAT--TAAAAAAATCTGAATGT
TTTTTTGCAAGAAACATTGATGTTTTTTCTACACTCATGCAAATTTTCACGATGGAAACACATTTGTGGAGGTGTGGACA
AAAAACAAAGTTGATGCTCCGAAAAGAGTGCCTCTTGAATCATCAATTTTGTGTTTTTGCCCACACTTCCACAAATGTGA
TTTCAACTTGAAAAGTAGCAAGCATGTATAAAAAAATATCAAT-GTTTCTTGTCAAAAAAATTAGATTTTTTGTTGTTTC
CTTTTTAC-TTTTTTTGGATTTAACTGTTCATCTG
>chr7B_351
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------------------------------GGCTAGGGTTTCTTGATTAATATGAGTTTCCAATGTCTGAGAGAAGAGAA
GCACAATACCATTTCCACTCAAAAGCTTCACCTGCTCCTTTCAGCGCAACCAATTCCTGGTAGCAAAAAGGAAGTTCATC
TTGGCCTCCTGTCTGCCAATCACAACAGGCTTTCCAATCCAAGTCAAATGAAAAACAAATATGATAAAGCACAAGACACA
AA-CTACACACAACACAAAGAAGAAACGGTCAGATCAACATGTGCAAAAATTAACCTTGTCCATGTACGGCGTCCTTCGT
TCCGCTCCATATGTCGTGGAGCTAAACCAAGTTGTCCGCTGGTGGGTCATACACC-------ATACCCTTTGACATCATC
TCTAAAACACAACAGCTATTACTTGCTCCGTTAATGGACCCGATCAATCAGTGGATCACATAATCATCATCGATCATGTC
ATGCGCTCGAGAGGAACGGGTCCACGGCCGCCGGCCGGTCACCTTGTCACGTCGACTAGTGGGCATACATATATGGCCAC
AAAGCCACGAGACTGGTGTCCATCACCGCACGTCAACGCCATCTCCATTAC------------------CTACCTAACCC
TGTCATCAACCTCGATCAACAGGTTTTGTCAAGAAACATAAGCTCGTTCAACAAGCATCCGTCGCTCCGATCCGATATGC
CGCCGTCTCACTGCTGCCGGCTGCTGGCGGTGGCCCTGCTCTCCGTGCTGCTCCTGTGGCGGCCGGCCGGCGCGGCCGAG
TACCCGGTCGGCGACGGCATCAACGGCTGGGACACCGGCACCAACTACGCCTCCTGGGCGCAGAGCCGCTCCTTCGCCCC
CGGCGACGTCCTAGGTCAGTATCTCCATCAACCTAGACAGCCG----ATTAGCTAACTAACCACGCGCATGATTTGATTC
GATCGATTAATCT-GGGGTGGCCGGTGCACGCAGTGTTCGAGTACGTCAAGAGCCAGCACAACGTCTACCAGGTGACGGA
GGCCGCGTACCGGACGTGCGACCCCTCCGCCCCCGGCTCCGTGCTCGCCACCTACGACACCGGCTTCGACAAGGTCCCTC
TCCCGGAGGCCAAGAGCTACTGGTTCATCTGCGAGATCTCCGGTCACTGCATGGGCGGTATGAAGCTCGCCGTCAACGTC
TCTGCGGGCTCTTCCGGAGGGGGTGCACCGGCGCCTGACACGCCGCCGTCCCCGTCAGCCGGTGCCGCTTGCCGGAGCAG
CTGGGTGGCCTGGGCCGCCGGCTTGGTGGTGCTCGGCGCAGTGCACGTCTTGGTCAACTGAGCTAGCTAGTCTGACCTGT
TCAAAATTGGCTCCTGTATGCTACTAGCTGTTTATTCTTCTGTCCTTTTCCATTTTTTGTATTTAATTTATGATTTTTGG
CGGATCAATCATGATTCACAGATACAACATTCGATTCAATTGCAGCCGCTGTTTGCCGCAAACATTTCCATGAAATTTGT
ATGTTCAGTTGAATTTATTCGGCAAGTTTTTTTTGTTTTTCCACCCTATCTATCTAGCTCTGTTCAACAACAAAT----C
TTCGTCATTTTAAGTCTTGGCGTATGCAAAACG-ATGCCAAATCCAGCC--AGTGCAAACTCCAATTACTCGTTTTGCCA
GCAAAAGTCT-TCCCACTATCAATGAGATGAGAAGTTGTTATACAAA----GGTGGAAAGGTGCACGCCGGGATAACATG
ATAGCCGTTCA---------------------------------------------------------------------
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>chr7A_429
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----------------------------CACATGCT-CTTTCAGCGCAACCACTTGTTGCA---AAAAAGCAAATTCATC
TTGGCCTCTTGTCTGCCAATCACAACAAGATT-----TCCAAGTCAAATGAAATAAGATA-----ACAACACAAGACACA
AAACTACACACAACACGAAGGAGAAACGGTCATATCAACATGTGGAAAACTTAACCTTGTCCATGTACGGCGTCCTTCGT
TCTGCTCCATATGTCGTGGAGCTAGAACAAGTTGTCTGCTGGTGGATCATATACTGTACCATATACGCTTTGACATCATC
TCTCATCACATCT-GCTATTACCAGCTCCGTTAATGGACCCGATCAATCA-TGGATCACATAATCATCATCGATCATGTC
ACGCGCTCGAGAATAACGGGTCCACGGCCGCCGGCCGGTCACCTTGTCACGTCGACTAGTGGGCATACATATATGGCCAC
AAAGCCGTGAGACTAGTGTCCATCACAGCACGTCAACGCCTTTCCATTACCCACCTAACCGAGATATCTCTACCTAACCC
TTTCATCAAGCTCGATCAACAAGTTTTGTCGAAAAACATAAGCTCGATCAACAAGCATCCGCCGATCCGATCCGATATGT
CGCCGTCTCACTGCCATCGGCTGCTGGCGGTGGCCCTGGTCTGCGTACTGCTCCTGTGGCGGCCGGCCGCAGCGGCTGAG
TACCCGGTCGGCGACGGCATCAACGGCTGGGACACCGGCACCAACTACGCCTCATGGGCGCAGAGCCGCTCCTTCGTCCC
CGGCGACGTCCTAGGTCAGTATCTCCATCAACCTCGATATATAGCCAATTAGCTAACTCGCCAGGCGCATGATTTGATTC
GATCGATTAATTTGGGGGTGGCTGGTGCACGCAGTGTTCGAGTACGTCAAGCGCCAGCACAACGTGTACCAGGTGACGGA
GGCCGCTTACCGGACGTGCGACCCCTCCGCCACCGGCTCCGTGCTGGCCACCTACGACACCGGCTTCGACAAGGTTCCTC
TCCCCGAGGCCAAGAGCTACTGGTTCATCTGCGAGATCTCCGGTCACTGCATGGGCGGTATGAAGCTCGCCGTCAACGTC
TCTGCGGGCTCTCCCGGAGGCGGTGCACCAGCGCCCGACGCGCCGCCCTCGCCGTCAGCCGGAGCCACGTACCGGAGCAG
CTGGGTGGCCTCCGCCGCCGGCTTGGTGGTGCTAGGCGCACTGCACGTCTTGGTCAACTGAGCTAGCTAGTTTGACCTGT
TCAAAATTCGCTCCTGTATGCTACTAGCTATTTATTCTTCTGTCCTTCTCCATTTTTTGTATTTAATTTATGATTTTTGG
CGGATCAATCATGATTCACAGATACAACATTCCATTCAATTGCAGCCGCTGTTTGACACAAACATTTGCATGAAATTTGC
ATCTTCAATTGAATTTATGCGGCAAATTTTTG----TTTTCCACCCTACCTATCTAGCTCTGTTCAACCACAAAT----C
TTCGTCATTTAAGGTTTTAACGTATGCAAAACAAATGCCAAATCCAGCC--AGTGCAAACTCCAATTACTATGTTTGCCA
ACAAAAGTTTCTCCCACTGTCAATGAGATGAGAAGTTGCTCTACAAACAAAGGTGCAAAGGTGTGCGCTGGGATAACATG
ATATCCGTTCAGATAGTGCTTCCATTACATGCCAAAAGTTCTTT--------------------TTGTTGCTTAGTTCTA
AAAAGAACAAACCCATTGCTTACCACAATTTGACAGTTGTCTAAGTAAAAAAAAAACATGTTTGATAAGTTTAACGCACT
CGTGGCGGCTGCATTATTAATATTATGAGCATAACAGAGAAGGGGGGC---AATGGTGGTAAAAATACGAAAGTGCTATT
GT--GCTCGAGCTCACATGATCTTGAGTGAACAGTAAATTCCAAAAAAATATAAACAACATTATAAAAAAATCTGAATGT
TTTTG-GCAAGAAACAC-----------CTACACACATGCAAATTTTCGCGATGGAATCACATTTGTGGAGGTGTGAAGA
AAAACCAAAGTTGATGCTCCAAGAAGAGTGCTTCTTGAATCATCAATTTTGT-TTTTTGGCCACACTTCCACAAATGTGA
TTTCATCATGAAAAGTAGCAAGCATGTAGAGAAAAAACATAATGGTTTCTTATAAAAAAATCCAGATTTTTTGTTGTTTT
CTTTTTATTTATTTTTGAATTTTACTGTTTATCT-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------
-----S--------------S-----------------------------------------------------------
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--------------------------------------------S-----------------------------------
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-------S--------------------------------S---------S-----------------------------
-------------------S--------------S---------------------------------------------
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--------------------------------------------S--------------------------S-S------
-------S------------------S-----------------------------------------------------
----------------------S-------SS-----S------------------------------------------
-------------------------------------------S--------------S---------------------
--S--S--SS----S--S-----S-----------------S-----S--S--S--S-----S-----S-----S-----
---------------------S-------------S---S-----------------S----------------------
-----S-------S----S--------------------------S-S----S-------------------------S-
--S----S------------------------S--------------S------------------------------SS
-----S---S-------------------------------------------------------------S---SSSS-
---------------------S----------S----S-----------SS-----------------------------
SS-----------S--------------S------------------------------SS-------------------
--------------------------------------------SSSSSSSSSSSSSSSSSSSS---S------------
--S--------------------------------S--------------S---------S--S------S---S----S
S--------S---S--------S--------------S----SS-SSSSSS---------------S-------------
-SSS-----------------S-----------------------------SS---------------------------
----SS----------SSSSSSSSSSSS------S-------------S--------S------------------S-S-
----S---------------S-S--------S--------------------S------S--------------------
-----S-S--------------------S-S-----SSSS-----------S-S------SSS----------------S
-------S--S------S----S------S----S
>forward_136
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------------------------------------TCCACACACATACATCCGGC------------------------
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>reverse_1958
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-------------------------------------TCAAATCCAGCCAGAGTGCA-----------------------
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-----------------------------------
