>input_sequence_73658
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---------------------------------------------------------AGCAGCAGCGAGCGATCTGCACT
AGTCACCGCAAGAACCAC---CACCACAAGTGAGTGACTGTCCGAGCAGGGAAAGGCAGGGAGAGATGGCAATGAGGCCG
CTCGTCGTGCTCGCCCTGGCCGTGGCGCTGGCCGGCGTGGCGCTGGGAGGGGGCGCGGCCGAGGGGGCCGGCGAGTGCGG
GAGGGCCTCCCCCGACCGGATGGCCCTGCGCATGGCCCCGTGCATCTCGGCGGCGGACGAGCCGGACTCGGCGCCCTCCA
GCAGCTGCTGCTCGGCGGTGCACACCATCGGCAAGAGCCCCAGCTGCCTGTGCGCCGTCATGCTGTCCGGCACCGCCAAG
ATGGCCGGGATCAGGCCCGAGGTCGCCATCACCATCCCCAAGCGCTGCAACATCGCCGACCGTCCCGTCGGCTACAAGTG
CGGAGGTACTA-CCTACACATCACATTTCACATGTACTCCTACTTT----------CTAACCAGT---------------
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-----------AATAATCTGCTGATAATGTCATATAGCAATGCTAATTATCCGGTTTCTTTGGTTCGACAGATTACACGC
TGCCTTGATGGCCCGGCAATGCTGCCGATCAAGATGAATGCTGTGGAAGGTGTCGTCGTGTGGGAATAAGCGAGTGGTGC
ATGT----------------------------------------------------------------------------
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---------------------------------------------------
>chr7B_1_TraesCS7B01G351900
AAACAAGTTTGTAGCTAGTTCTCCGGATGCAATTTACTGTTGCCGTGGTGT---------TGAGTCACACCAAGACCAAG
TAGATGGATGATGTGCAGTA------------------------------------------------------------
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------------------TTATCAGTTATGTGGATGTTCATGTTCTTTCCTAGTAGTACGCAAAGTTCTTTCCTAGCCCG
GGCTACATGGCACCTACTCTCACCACCATTGATTCACTACCTCGGGATATGTGGAACAGTAAGATGCAGAGTTAGACAAT
TAGCGGACAACATTATCAGCAATCCCACTATTACATTTCATTTCTTACCAGCACGCAACTTTTGACTCAGTCCAGAATCT
TTTTCTGCACTACGCGCCGGAGGAACCCCAGCCAACAGTCTGACCATGTGATTGCTCAGATTCTCAAGGTTTCACGAATT
GAAATAAAGAAAATGAGAAAGTGTAAGCAAGAGAGAGACTGTGTGTCGCATGCAAATGTCGGCAGAGAGAGTTGTGTGAG
CTGCATGCTTGTTTTACAACCTAGATGCAAAAGTTAAGAGAGAGAGAGAGAGCGCATGCTTGTTTTACAACCTAGATGCA
AAAGTTAAGAGAGAGAGAGAGCGCATGCAATTGGAGAGAGTGTGTTGCATGCAGCTGGTCCTGACACACACTGTTCACAC
CTCTCTTTTTTTATTAGCAAGAGACTCTCTGGTGTGCTGCATGCTACTCTCCTTTTTTATTCGCAAGACACTGTTTTCTT
CCTCTCCTCCATCTTACTCTCTCGTGTACCGGCCACAACCACAG------CGCATAGTGCGCGTGGCGCGTTTTAGAATG
TTTATATGGCAGGTCCACGGCGCAAGTGCTGTCCTACCAGAAGCCCACTGGCTAGTGTGTACACCCTTCATCACTACCCA
GAGTGGAGAAACCATTAGCACT--GTCCAGTGCGACTAGAGGAGTGCCAAGTGCTCCATCCATAACGAGGTGCTCCCCAC
AATGACACTGCCA--CACTGCTATATAAGAAGCACCACCCATGCCAGAGCAGGCAGCAGCAGCAGCGAGCGATCTGCACT
AGTCACCGCAAGAACCAC---CACCACAAGTGAGTGACTGTCCGAGCAGGGAAAGGCAGGGAGAGATGGCAATGAGGCCG
CTCGTCGTGCTCGCCCTGGCCGTGGCGCTGGCCGGCGTGGCGCTGGGAGGGGGCGCGGCCGAGGGGGCCGGCGAGTGCGG
GAGGGCCTCCCCCGACCGGATGGCCCTGCGCATGGCCCCGTGCATCTCGGCGGCGGACGAGCCGGACTCGGCGCCCTCCA
GCAGCTGCTGCTCGGCGGTGCACACCATCGGCAAGAGCCCCAGCTGCCTGTGCGCCGTCATGCTGTCCGGCACCGCCAAG
ATGGCCGGGATCAGGCCCGAGGTCGCCATCACCATCCCCAAGCGCTGCAACATCGCCGACCGTCCCGTCGGCTACAAGTG
CGGAGGTACTA-CCTACACATCACATTTCACATGTACTCCTACTTT----------CTAACCAGT---------------
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-----------AATAATCTGCTGATAATGTCATATAGCAATGCTAATTATCCGGTTTCTTTGGTTCGACAGATTACACGC
TGCCTTGATGGCCCGGCAATGCTGCCGATCAAGATGAATGCTGTGGAAGGTGTCGTCGTGTGGGAATAAGCGAGTGGTGC
ATGTACCACTTATGTGGGGCACTAGTGACTCCATGGAGGTGCCACCATGTGATGTGTGCTTGTGGAAATATGTTTCTATA
AGCATGTAATGTTTCGTCTGTGTTAACGTGAACAAACGTCTCCGTGTGGTTTCTATTGTCGTACGAAAGGCTTTCCCCTG
ACTTTATATAAAAAGGCCGCAAACGGCAGCAG-AAGTCCTACAAACACGCAAACACACCACGTCAAGTTCATCGG-----
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---------------------TTACAGATTACGGTCCAAACCAAAATGTTATAAAGCGCGACAATGAAAGGCTTAATCCA
CGTACCTCGTAATCGATGAGCGAAATGTGGTGATCATCGCCATTGCGGCTCCCATTCACGTTCCGTCATGCCTCTTTGCC
GATGGCCTCCAAAGTTGC---ATGTAGATAAGCATTTTGAAGATACCGTCAACCGAGGTGAGAGGGAATAACCCATTCAA
CTGTTAATTTCTTTTTTTTTTGCGGGAAAACTGTTGATTTCTTGACCAAAACAACCTCT-AAGGATCGCCAGCAAGCCTC
GAACACACGGGGGATTCCAGTCACGAGCTAAAAATTTCCCAAGCGGCATCCACATTATTACCTA----------------
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---------------------ACTAAGTGACATAAGAAAAGGATGTGAACACATTATATCACATCCGTTTGACGATGTGA
ACACATTATC----------------------------------------------------------------------
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---------------------CCCCACCAGCTTCGCACCATGAGCTGCAA--------CAGTGTCAGCTACTTTTATCAT
GTGCAAGTTCTAGGACATTTTTATTATTTTTTTAGAAAAGGAGGAAGCCTCTGCGTCTGAACGATGCATGCAGCCAATTT
ATTAATTATTCACACAGGACCTTACAAAGTCATACAACAGCAAGACTAAAACCACCGTCTAAGCAACATCTGTCACTACT
CCTATCCGGTTGATGAAGGGGTGTTGATAGTTTGGGCCTAATACCAAACATACCTCGCAGCCAAACCTAACATTTAAGAC
ATGAGGTCCCAATCAAGACGCTTGCCGAGTATGGGGCACCCACCAGTCTGG
>chr7D_1
AAACAAGTCTGTAGCTGGTACTCCGGGTGCAATTTACTCTTGCCGTGGTGTGTGACTGTGTGAGTCACACCAAGACCAAG
TAGATGGATGATGTGTAGTA------------------------------------------------------------
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------------------TTATCAGTTGTGTGGATGTGCATGTACTTTCCTAGTACTCCGTATATCTTAGTACCGG----
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--------------------------------------CCACAACCACAACGCATAGTGCGCATGGCGCGTTTTAGAATG
CTTATT--GCAGGTCCACGGCGCAAGTGCTGTCCTAGCAGAAGCCCACTGGCTAGTGTGTACACCCTTCATCACTACCCA
AAGTGGAGAAGCCATTAGCATGTGGTCCAGTGCGACTAGAGGAGTCCCAAGTGCTCCACCCATAACGAGGTGCT--CCCC
ACAATGCCGCAATATCACTGCTATATAAGACGCACCACCCATGCCAGAGCAGGCA---GCAGCAGCGAGCGATCTGCACT
ACTCACGGTAAGAACCACAACCACCACAAGTGAGTGACCATCGGAGCAAGGAAAGACCAGGAGAGATGGCAATGAGGCCG
CTTGTCGTCCTGGCCCTGGCCGTGGCGCTCGCCGGCGTGGCACTGGGAGGGGGCGCGGCGGAGGGGGCCGGCGAGTGCGG
GAGGTCCTCCCCCGACCGGATGGCCCTGCGCATGGCCCCGTGCATCTCGGCGGCGGACGAGCCGGACTCGGCGCCGTCGA
GCAGCTGCTGCTCGGCGGTGCACACCATCGGCAAGAGCCCCAGCTGCCTGTGCGCCGTCATGCTGTCCGGCACCGCCAAG
ATGGCCGGGATCAAGCCCGAGGTCGCCATCACCATCCCCAAGCGCTGCAACATGGCCGACCGCCCCGTCGGCTACAAGTG
CGGAGGTACCTCCCTACACATCACATTTCACATGTACTCCTACTTCCGAATACTTGCTAACCAGT---------------
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-----------AATAATCTGCTGATAACGTCGTAGCAATGCTGAG----TCCGGTTTC-TTGTTTCCACAGATTACACGC
TGCCTTGATGGCCCGGCAATGCTGCCGATGAAGATGAATGCTGTGGAAGGCGTCGTCGTGTGGGAATAAGCGAGTGGTGC
ATGTGCCACTTATGTGGGGCACTAGTGACTTCATGGAGGTGCCATCATGTGATGTGTGCTTGTGGGAATATGTTTCTATA
AGCATGTAATGTTTCGTCTGTGTTAACGTCAACAAACGTCTCCGTGTGATTTCTATTTTCAGACAAAATGCTTTCACCCG
ACTTTGTATAAAA--GCCTCAAACGGCACCAAAAAGTCCTACAAACACGCAAACACACCACGTTATGTTCATCCG-----
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---------------------TTACAGATTACCGTCCAAACCAGAAGGTTACAAAGCACCACAGCAAAAGGCTTAACCCA
CGTACCTCATAATCGATGAGCGAAATGCGTTGATCATCGCCATTGCGGCTCCCATTCATGTTCTGTCATGCCTCTTTGCC
GATGGCCTCCAAAGTTG---TATGTAGATAAGCATTTTGAAGACACCGTCAACCGACGTGAGAGGGAAAAACCCATTCAA
CTGTTA------------------------------ATTTCTTGACCAAAACAACCTCTTAAGGATCGCTAGCAAGCCTT
GAACACACGGGGGGTCCAAGTCACAAGCTAAAAATTTCCCAAGGGGCGTCCACATAAGTCCTTCTGGAGATTTCAAAACA
TAAGTCCCTTCGTTTCTAAATATAAGTCCTTCTGGAGATTTCAATACAAACTCCATACGGATGTATATAGACATTTTTAG
AGTGTAGATTCACTCATTTTACTTCATATGTAGTCCGTACTCATTTTACTCCATATGTAGTCCATATTGAAATCTTAAGA
CTTATATTTAGGAACGGAGGGACTAAGTGACATGAGAAAAGGATATGAACACATTATATCACAACCGTTTGAGGATGTGT
ACTCCCAACTTCTTCAGCAAAGACTGAACCCAAACCACCTCACCTGACGCATTTGCCACGTTCTGCATCTGTACTAGAAC
ATGGCAAAGTTACTTGCTTACGAGCACTCCATGGTACAAGATTTGAAACGAGAAACACTGCAAAGCCTCTTTAAGTATGC
CGTCTACTAGACAAACGAAACAGCTGCTCTGGGAAGACAAGTAAAGCTGATAAACAACAGGGTACAGTTACTCACGGATA
GAGCCTGGGCACAGAGGATGAAGAAACCATGCGCTTTGTAATTTCAAAACATCTTCTCTGAGCCGGTAGGTAGGATATTT
CTTGAAGTATCTGGGGGTGAATGAAACACACTGCTATCTTTGCTGGCACAGGTACAAACCTGGGATCGTTTTACAAGAAA
CTGGGTACGATCAATGATGCAGACGCAACGCTAGGATGCCGATGGCCGGTTGAAGCATGGGGATAATACGGAGTTATGGC
CCGCTAGCACGGTAGTGTTCTTGCTTCTCTTTTGTCACAGCTATATAGGAGTACAGACTACAGAGTATGCTAGTTGTTGG
GGCAGAAAGCGAAGAAGAAACGCTCGACCAGCCAAAACTTCAGGACTCGGGAGTGACCTGTTGGACAAGGATGAAGACGT
GCATGGAGGAAAAGCTTTTGCTTTTGCAACCAACATTGGATATTGCATACCTTGGTTTGAGTCTCACAAGTTTAGCCTGG
TAATGGTATATTGTTATTTTTGGAGATGGAACCAAAATCCATTGATCAAACAAGCTCAACGGATTCGTTGGCTACAAGGC
CTAGTACGAAAGCTGGGAGATCCCCACCAGCTTCGCACCATGAGCTGCAAGCCTGCAACAGTGTCAGCTAC-TTTATCAG
GTGCAAGTTCTAGGACA---------------------------------------------------------------
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---------------------------------------------------
>chr7A_28
---------------------------TGCAATTTACTCTTGCCGTGGTGT---------TGAGTCACACCAAGACCAAG
TAGATGGATGATGTGTAGTACTCCCTCCAGCCCTTTTTACTCCATGTATTCCCACCGTTTCTTTTTAGTCTGCATATAAG
ATTTGATCAAAGTCAAAATTTGTAAACTTTGACCAACTTTATAGAAAAAAATATCAACATCTACAATACTAAATCTATAT
GGTGTGGAAATTAATTTCATGATGCATCTTACGATATTGATTTCATATTATGAATCTTAATTTTTTTTTTCTATAAACTT
AGTCAAAGTTAACAAAGTTTGACGCTGACCAAATCTTATATGCAGACTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAACTACATTTCATAATAAATCTAACAATCTTGATTTGGCATT
GTGACTGTTGATACTTATTTCTATAAATTTGGTCAAAGTAGAGATATTTTGACTTCGGACGAAATTTATATGCAGATTAA
AAAGGACTAGAGAGAGTATTATCAGTTATGTGGATGTTCATGTTCTTTCCTAG---------TATCTTAGTACCGG----
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--------------------------------------CCACAG------CGCATAGTGCGCGTGGGACGTTTTAGAATG
TTTATATGGCAGGTCCACGGCGCAAGTGCTGTCCTACCAGAAGCCCACTGGCTAGTGTGTACACCCTTCATCACTATCCA
AAGTGGAGAAACCATTAGCATGTG-TCCAGTGCGACTAGAGTAGTCCCAAGTGCTCCACCCATAACGAGGTGCCCCCCCC
ACAATGCCGCAATGCCACCGCTATATAAGAGGCACCACCCATGCCAGAGCAGGCA---GCAGCAGCGAGCGATCTGCACT
AGTCGCTGCAAGA---ACCACCACCACAAGTGAGTGAACGTCGGAGCAAGGAAAGGCAGGGAGAGATGGCAATGAGGCCG
CTCGTCGTCCTGGCTCTGGCCGTGGCGCTGGCCGGGGTGGCGCTGCGAGGGGGCGCCGCGGAGGGGGCCGGCGAGTGCGG
GAGGTCCTCCCCCGACCGGATGGCCCTGCGCATGGCCCCGTGCATCTCGGCGGCGGACGAGCCGGACTCGGCGCCCTCCA
GCAGCTGCTGCTCGGCGGTGCACACCCTAGGGAAGAGCCCCAGCTGCCTGTGCGCCGTCATGCTGTCCGGCACCGCCAAG
ATGGCCGGGATCAAGCCCGAGGTGGCCATCACCATCCCCAAGCGCTGCAACATGGCCGACCGCCCCGTCGGCTACAAGTG
CGGAGGTACCT-----------ACAAAGCACATGCTCTCCTATATA----------CTCCCTCCATTCCGAATTACTTGT
CGCAGGTATGGATGTATCTAGATGTATTTTAGTTCTAGATATATTCATTTTTGCGACGAGTAATTTGAAACGGAGGGAGT
AATTGCTAACGAATGATCTGCTGATAATGTCGTAGCAATGCTGAG----TCCGGTTTCGTTGTTTCGACAGATTACACGC
TGCCTTGATGGCCCAGCTCTGGTGCTGATGAAGATGAATGCTGTGGAAGATATGGTCGTGTGGGAATAAGCGAGTGGTGC
ATGTACCACTTAAGTGGGGCACTAGTGACTGCATGG---TGCCTACATGTGATGTGTGCTTGTGGGAATAT--TTCTATA
AGCATGTAATGTTTCGTCTGTGTTAACGTGAACACACGTCTCCGTGTGATTTCTATTGTCATACGAAAGGCTTTCCTCTG
GCTTTATATAAAA--GCCTCAAACGGCACCAACAAGTCCTACAAACATGAAAACACACCACGTCAAGTTCATCAGTTTAA
GCATCTTCAACAGCCGCGCAACGCGCCGCGCGCTAAAAGTCGCGATACAGCACCGGATTAGCCAGCTTTTGCTCGCAGCG
GTGCGCTGGCTCCAGCGGCCGCCGCAAATTAGAGCGCATCCACGCCGCTCCAGCAGGCGCGCTATATTTTAGTTTTTTCT
ACTACATATTTGGTTTCGTAGATAGTTCTACTACTACTCGTCCGACTTGGACTCTGTCTCAATGATGTCCTCCTCTGACG
TCGGAGCGTAGGCGTCAAGAAACCGCTCGTCGCCGGAGTTTCGAGACGGAACCGCATGCAGCCGCCCGACCAAATCTCGG
CGGAGTAGGTGCCGGACGGACGCACGCAGACGCCGCGGTAGCCCGTACCTCCCCGGCGCCGAGGCGGCATTGTGGCGCGG
TGGTGGCGTGTCGGCGGCAGAGCGCGGCAGGGGGCGATGGAGAGATGGAGAGAGCAGCAAAGGGCAATGGAGAGAGCGGC
GGAGGCGCTGTAATTTATAGGCGCGCCGGACGCGGCGCGCCAAATGTAGCGCGCGAGCGGTCGCCTTTTCCCGCGCGCGT
TAGTTTCGCGCCACCGCTAGAGCGCGCGAAAACATCCCCCGCGCGCTATAAGCTAATTTACCGCGCACGCGCGTCTTTTG
GCGCGGCTGTTGGAGATGCTCTTACAGATTACGGTCCAAACCAGAAGGTTACGAAGCACCACAGCGAAAGGCTTAATCCA
CGTACCTCGTAATCGATGAGCGAAATGCGTTGATCATCGCCATTGCGGCTCCCATTCATGTTCTGTCATGACTCTTTGCC
GATGGCCTCCAAAGTTGTATTATGTAGATAAGCATTTTGAAGATACCGTCAACCGAGGTGAGAGGGAATAACCCATTCAA
CTGTTAATTTCTTTTTTTTTTGCAGGAAAACTGTTGATTTCTTGACCAAAACAACCTCT-AAGGATCGCCAGCAAGCCTC
GAACAAACGGGGGATTCCAGTCACAAGCTAAAAATTTCCCAAGGGGCATCCACATTATTACCTA----------------
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---------------------ACTAAGTGACATAAGAAAAGGATGTGAACACATTATATCACATCCGTTTGAGGATGTGA
ACACATTGT-----------------------------------------------------------------------
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----------------------CCCCCCAGCTTCGTACCATGAGCTGC--------AACAGTGTCAGCTAC-TTTATCAT
GTGCAAGTTCTAGGACAT--------------------------------------------------------------
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---------------------------------------------------
>SNPs
--------S-------S--S------S-----------S-----------------------------------------
---------------S----------------------------------------------------------------
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-------------------------------------------------------S-S--S-S-SS-SSS-S-SS-SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------
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S-------------------SS-----------------------S------------S-------------------S-
-SSSSSS-SSSSS-----------------S------------------------SSS----------------------
------S-------------------------------S---S-----S-------------------------------
--------S--S-----------------------------------------------S--------------------
----S---------------------------------------------------------------------------
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-------------S---------------------------------------S--------S-----------------
---------SS----------------------------------S----------------------------------
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-------------------------------S--SSSSSSSSSSSSSSS---------S---S-----------------
-----------------------------S--------------------------------------------------
------------------------------S-------------S--------------------S--------------
------------------------------------------------S-----------S-------------------
-------------SS---S---------S--S-----------------------------------------S------
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-------------------------------------------S--S----S-----S-S---SS---------------
---------------------------S-S----------------------------S----S----------------
-----------------S--------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------------------S------------------S------------------------------------
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------------------------------------------------------------------------S-------
---------S----------------------------------------------------------------------
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-----------------------------------------------------------------------S--------
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1394
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--------------GAGAGAGCGCATGCAATTGG----------------------------------------------
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>reverse_5202
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-TGAGGTCCCAATCAAGACGC------------------------------
