>input_sequence_73650
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-----------------------------------------------ATGCTGCCAGTGCCATACCACAATTCGTGGTCT
CTCTATGTTGTTGATGTCGACGAGAAGACGCTACTTGTTAAGGACCCGTGCGAGACCTCAAATGGAGAGGACGCCATGAA
ACTGAAGCACGAAGATAATGCAAACCACATCATCGAGGGACTCCGTCGATGCATCCATGAAAACATTGCAGGCTGGTATG
TGCCAGCTCAAGGGTGGAGGGTGAACTACAATGTAGGGATGCACCCCAACAGCGAAATGTGCGTGCCCT--TCTTTGATA
ATTGCAAAACTACTTAGCAGATGTTGTTAAAACAAGATTTTGAACTGGTTCGACTAAAATTTGTGCAGCCATGACAGCCA
CCTGCATGTGGTGAACTACATCAGGGAGTTCACGGGCCTGTACATCTACAATCCTCTCACACCGGTACGTGCAGTGTTCA
TGATGCTCCATA-----------CACTATTTTTGAAACAAGTTGTAAGAGGAATCATGAACAACTAGTGATGCTGACATA
GATTACTACTGCCAAATTTCAGAATCGCCTACACTACTTCCGGCAGATGATTGCTTACGAGGTCATTTCAATGAGGGGAA
ACAAAGCAGAGCTACCTGATTTTATGCTGGAGGTGGTGCCATTCTGA---------------------------------
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>chr7A_1_TraesCS7A01G451400
AAGTAAGATATCATATGACTGACACTAGCAGCATGGATTTGCGTGACCTGACCGGCTGATCATGTAATACAGTTACTGCA
TCTGGTGGATCATCAGTAGCAGCTAATCGCGTGGTGGGGTCTGCATCGGCAGGGGGCGAGCAGCATCTCCATCAAGGTAT
AGGTTACAAAATTATGCATTCAAAACTGACGTTGACAACCTAGAAGCATAACATCTTTGTCGGACGGGTGTTTCAGCTGA
TGCAGCCAGCAATCAGGGCGCTGAGCCTAGTCTGGGAGGCTCGGGACCTGTAAGGGTGCAAGTCGGTATGGTTAGGACAT
TTGTGAAGAATGAAATGGGAGACAAATTCCCGGGGAAAGCTGGACTGAAGCATGAAGAGCCGACAACAAAGAATGTGGTG
TACTTCTTCGACAAAATGCTGACATGCACGAGACAGGAGCTCGACAAGTAAGTTCAAAAGCAGAGACATTAGAAGAAGGT
GCATCCACCCATCCCGACATGGATTACTTGTACTTACCACTTGCTGAACTCATTTCGCAGGAAATGGTTCAAACACCTTG
CCTCGTACCTAGTTGTGATGTGTGGTGATGATTTTCGGAAAGAATTTGGGCCGAATGGAAGGCTAACAATTACTGGTTGC
GTTTGCTTGAGCCGAATGATCACTTACAAGGAAGGGCTCATGTACGGTTCATGGCAGATCAGGTGGCGCCATGTCTTTGA
TGTGCGCTTTGTGGTGAGTCGTTGACATGATTTTTGCGCTTGTGCCTCTTGAGTAACATGTATGACCCGCTAACTGGAAA
TA-TTTGGTTGCAGCTTGCCTTGATGTACAACTCATACAGTCTAGATTTCAAATTCATGAATACAATGATGAGCTTTGAG
GCGCTTGGATATAGGTTTCAGTGGACCAAGAAGGTTAGCGATTAATCATCCTGATAT------TGTACTATATTATACTT
GGTTTGCCCTGAATCGGAGCGCTAACTACGGTGATCATTTTCAGCTGATGCTGCCAGTGCCATACCACAATTCGTGGTCT
CTCTATGTTGTTGATGTCGACGAGAAGACGCTACTTGTTAAGGACCCGTGCGAGACCTCAAATGGAGAGGACGCCATGAA
ACTGAAGCACGAAGATAATGCAAACCACATCATCGAGGGACTCCGTCGATGCATCCATGAAAACATTGCAGGCTGGTATG
TGCCAGCTCAAGGGTGGAGGGTGAACTACAATGTAGGGATGCACCCCAACAGCGAAATGTGCGTGCCCT--TCTTTGATA
ATTGCAAAACTACTTAGCAGATGTTGTTAAAACAAGATTTTGAACTGGTTCGACTAAAATTTGTGCAGCCATGACAGCCA
CCTGCATGTGGTGAACTACATCAGGGAGTTCACGGGCCTGTACATCTACAATCCTCTCACACCGGTACGTGCAGTGTTCA
TGATGCTCCATA-----------CACTATTTTTGAAACAAGTTGTAAGAGGAATCATGAACAACTAGTGATGCTGACATA
GATTACTACTGCCAAATTTCAGAATCGCCTACACTACTTCCGGCAGATGATTGCTTACGAGGTCATTTCAATGAGGGGAA
ACAAAGCAGAGCTACCTGATTTTATGCTGGAGGTGGTGCCATTCTGAAGAGAGGAAACAAAGAAGATTGCAAGACGTCTG
GATTCACCAGCTCCATCAAGTAGTAAACGCTGGACAGGGAACATTAGCTACCATCCCAAAGTACTTCAACCCGTGTGGTA
GTGGTTCCATCACTTTTGGGTTTGCTGCAAAAGTTTGCGAGACTAGTCCATGAAGCGGCGCGACATGGTGGAAATGTTAG
CTGCCATCCCCACGGTGTGGTAGTGGTTCCCCCTGCGGTTCGAATTAAAGCCCTAACTAATTATGGGCACATGAAATAGA
CATGTTTAAGTTTGGTATCAGGCTGAATTAAGAACCCTATATGTAGAACTTTCGTTTGGTGGGAGCAATGTTTGTTCGGA
CCGATGTTTGTTCGGTTTATTTGGTGGATGCATGGTTTGTTACCTAAAAAATGCATGCGTTGGTGAGTTCAGTAGACATA
GACCATGTATCACCTGAAAAATTTGGTATGCAAAGATCGTGTCATCTTGTGAAGGATGGGCTGATAGATTTTGTAATAAC
CTATCCTCACAGAATGATAGATTAAGACCACGGATGATATACTGCCTGCATGTATCACGAATTTGGGAGGTGTTTGTTGC
AATGGCATATCACTGAATATTTGGAAGGGTTCATCCAATGTTGATTTGGGGATGAATTAATGTTCACTTTGTACGTGCCT
GAAAGCTTAGGACGGGAACAAGGCTTGTTTCAAAAATTAATTGTCAATCCTTGCTACGAAACCAGGCTCATTCGGCTAGA
AATGGTAAATTGGTTCACATATTGATATATGTGTGTGAACATGGTTCCAAGGTACACATAATACAACAGCTAGGGCCACG
AATTAGGCAACTATTCATTGCCACAACATGAGACCGAATGGTTGGTGTGATTTATCTGTTGTTGATTTGGAAATGAATTT
ATTTTAATTTAGTGGGATTACATGACTTTACTGCTGAATGAACACAATGCCCATGTTCACAGTCGTTGTTGACCCTTGGA
AACAAAC
>chr2A_1
AAGTAAGATATCATATGACTGACACTAGCAGCATGGATTTGCGTGACCTGACCGGCTGATCATGTAATACAGTTACTGCA
TCTGGCGGATCATCAGCAGCAGCTAATCGCGTGGTGGGGTCTGCATCGGCAGGGGGCGAGCAACATCTCCATCAAGGTAT
AGGTTACAAAATTATGCATTCAAAACTGACGTTGACAACCTAGAAGCATAACATCTTTGTCGGACGGGTGTTTCAGCTGA
TGCAGCCAGCAATCAGGGCGCTGAGCCTAGTCTGGGAGGCTCGGGACCTGTAAGGGTGCAAGTCGGTATGGTTAGGACAT
TTGTGAAGAATAGAATGGGAGACAAATTCCCGGGGAAAGCTGGACTGAAGCATGAAGAGCCGACAGCAGAGAATGTGGTG
TACTTCTTCGACAAAATGCTGACATGCACGAGATAGGAGCTCGACAAGTAAGTTCGAAAGGAGAGACATTAGAAGAAGGT
GCATCCGCCCATCCCGACATGGATTACTTGTACTTACCACTTGCTGAACTCATTTTGCAGGAAATGGTTCAAACACCTTG
CTCCGTACCTAGTTGTGATGTGTGGTGATGATTTTCGGAAAGAATTTGGGCCGAATGGAAGGCTAACAGTTACTGGTTGG
GTTTGCTTGAGCCGAATGATCACTTACAAGGAAGGGCTCATGTACGGTTCATGGCAGATCAGGTGGCACCATGTGTTTGA
TGTGCGCTTTGTGGTGAGTAGTTGGCATGATTTTTGCGCTTGTGCCTCTTGAGTAACATGTATGACCCGCTAACTGGAAA
TA-TGTGGTTGCAGCTTGCCTTGATGTACAACTCATACAGTCTAGATTTCGAATTCATGAATACAATGATGAGCTTTGAG
GCGCTTGGATATAGGCTTCAGTGGACCAAGAAGGTTAGCGATTAATCATCCTGATAT------TGTACTATATTATATTT
GGTTTGCGCTGAATCGGAGCGCTGACTACGGTGATCATTTTCAGCTGATGCTGCCAGTGCCATACCACAATTCGTGGTCT
CTCTATGTTGTTGATGTCGACGAGAAGACGCTACTTGTTATGGACCCGTGCGAGACCTCAAATGGAGAGGACGCCATGAA
ACTGAAGCACGAAGATAATGCAAACCACATCATCGAGGGACTCCGTCGATGCATCCATGAAAACATTGCAGGCTGGTATG
TGCCAGCTCAAGGGTGGAGGGTGAACTACAATGTAGGGATGCACCCCAACAGCAAAATGTGTGTGCCCT--TCTCTGATA
ATTGCAAAACTACTTAGCAGATGTTGTTAAAACAAGATTTTGAACTGATTCGACTAAAATTTGTGCAACCATGACAACCA
CCTGCATGTGGTGAACTACATCAGGGAGTTCACGGGCCTGTACATCTACAATCCTCTCACAAAGGTGCGTGCAGTGTTCA
TGATGCTCCATGGCTGTAAGAGGCACTATTTTTGAAACAAGTTGTAAGAGGAATCATGAACAACTAGTGATGCTGACATA
GATTACTGCTGTCAAATTTCAGAATCGCCTACACTACTTCTGGCAGATGATTGCTTACGAGGTCATTTCAATGAGGGGAA
ACAAAGCAGAGCTACCTGATTTTATGCTGGAGATGGTGCCATTCTGAAGAGAGGAAACAAAGAAGATTGCAAGACGTCTG
GATTCACGAGCTCCATCAAGTAGTAAACACTGGACAGGGAACATTAGCTACCATCCCAAAGTACTTCAACTGGTGTGGTA
GTGGTTCCATCACTTTTGGGTTTGCTGCAAAAGTTTGCGAGACTAGTCCATGAAGCGGCGCGACATGGTGGAAATGTTAG
CTGCCATCCCCACGGTGTGGTAGTGGTTCCCCCTGCGGTTCAAATTAAATCCCTAACTGATTATGGGCGCATGAAATAGA
CATGT----------------------TTAAGAACCCTATATGTAGAACTTTTGTTTACTGGGAGCAATGTTTGTTCGGA
CCGATGTTTGTTCGGTTTATTTGGTGGATGCATGGTTTGTTACCTAAAAAATGCATGCGTTGGTGAGTTCAGTAGACATA
GACCATGTATCGCCTGAAAAATTTGGTATGCAAAGATCGTGTCATCTTGTGAAGGATGGGCTGATAGATTTTGTAATAAC
CTATCCTCACAGAATGATAGATTGAGACCATGGATGATATACTGCCTGCATGTATCGCGAATTTGGGAGGTGTTTGTTGC
AACGGCATATCACTGAATATTTGGAAGGGTTCATCCGATGTTGATTTGGGGATGAATTAATGTTCACTTTGTATGTGCCT
GAAAGCTTTGGACGGGAACAAGGCTTGTTTCAAAAATTAATTGTCAATCCTTGTTACAAAACCAGGCTCATTCGGCTAGA
AATGGTAAATTGGTTCAAATATTGATATATGTGTGCGAACATGGTTCCAAGGTACACATAATACAACAGCTAGGGCCACG
AATTCGACAGCTATTCATTGCCACAACATGAGACCGAATGGTTGGTGTGATTTATCTGTTGTTGATTTGGAAATGAATTT
ATTTTAATTTAGTGGGATTACATGACTTTACTACTGAATGAACACAATGCCCATGTTCACAATCATTGTTGACCCTTGGA
AACAAAC
>chr7B_532
ATTTG---------------------------------------------------------------------------
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---------------------------------------------------------CAGGAAGTGGTTCAAACACCTTG
TCCCGTACCTGGTTGTCCTGTGTGGTAATGACTTCGTGAGAGAATTTGGTCCTAACGGTAGGCTAACAGTGATTGGGTGA
GTTTGTCTTGGCCGAATGGTCACTTACAAGGAAGGACAAATGTATGGATCAAGGCAACTCAGGTGGCGCCACATATTCGA
TGTGCGCTTTGTGGTGAGTAATCGGTGACTTTGTGCTCAATTTGAGAG----GTGACATTTACCAGTCACTAACTAAAAC
ACGTGTGGGTGCAGCTTGCATTGATGTACAACTCCTATAGCCTGGACTTCGATTACACGAATACAATGATGAGCTTTGAG
GTGCTTGGCTACATGCTTGAGTGGACCAAGAAGGTCAGCACATGTTTAAACACATATGTTGGCTATACTATGATATATAT
GCCTTGCCCTTCGTCCAGATACTAGTTTGGTTCATCA-TTTCAGCTGATGCTCCAAGTGCCATCCATGAATCTGTGCTCT
CTTTATGTTGTTGATGTTGAGTAAAAGGCACTACTCGTGATGGACCCATGCGAGACATCCAAAGACAAAGATGACATGAA
GCTCAAGCATGAAGACAACGCAAACATCATCCTGGAGGGACTCTATCGCTGCATCCATGCAAACATATCAGGGTGGTATG
TGCCATCTTTAGGTTGTAAGATGCTCTACAATGTGGGGATGCATCACAGCTCTGAAATGTTTGTGCCCCACTCTCTGATA
TTCTCGAGTTCCTTAGCTAAGTAGGCTAAATAGAAGTGATACTGACTTGAC--CTGAAATTTCTGCAGCCAGGACAACCA
CCTACATGTGGGAAATTACATCAGGGAGTTCACAAATCTGTACATCTACAATCCTCTCACACCGGAACACGCAGTGGTCC
TGATGCTCTCAT--------------------------------------------------------------------
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>SNPs
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-----S----------S---------------------------------------------S-----------------
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-----------SS----------------------------------------------------S--S-----------
---------------------------------S---------------------S----S-------------------
------S------------------------------------------------S------------------------
--S-----------------------------------------------------------------S----------S
--------------------------------------------------------------------------S-----
-------------------S----S-------------------------------------------------------
----S---------------------------------------------S-----------------------------
---------------S-------------------------------------------------------------S--
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----------------------------------------S---------------------------------------
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-------------------------------------------------------------S------------S-----
-----------------------------------------------S----------------------------S---
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-----------S--------------------------------------------------------------------
-------S---S----------------------------S---------------------------------------
--------------------------------S-----------------------------------------------
-------S--------------------S-----------------------------------------SS--------
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-----------------------------------------S-------S--------S---------S-----------
-----SSSSSSSSSSSSSSSSSSSSSS-------------------------S----SS---------------------
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-----------S--------------------------------------------------------------------
-----------------------S------S-------------------------S-----------------------
--S---------------------------------S------------------------------------S------
--------S--------------------------------------------S---S----------------------
-----------------S-----------------S--------------------------------------------
----S-S--S----------------------------------------------------------------------
--------------------------------S----------------------------S--S---------------
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>forward_389
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-------------------------------------------------GCATGAAGAGCCGACAACAA-----------
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>reverse_1751
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----------------------------------------------------------------------CCGTGTGGTA
GTGGTTCCAT----------------------------------------------------------------------
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