>input_sequence_73639
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--------------------------------------------CTATTTATACACACCACCTACCTGCTCCACTCATGG
TGAGGCTGTGAC-TGAGAGCAGAGCACAGAGCGAGGAAAAACGCAGCGATGAGGTTCCTTGGCCTTGTGAGCCTGGTTGC
TCTGATCTTCCTGTTAAGCTTCAGGTCTTTGCTTCACCAGCAAGTGCTCGTTGGTAAGTTCGTAGAGC-AGTAGCCATTG
CTGTTACCTTGAGTAGTTCCTAGTATCTTTGCTGCATGAACATTCATTCACTGTCTGTTACTGAAGAAACAGAAGTTTTT
TTCCCTTCCGTGCAAGGAGAAGGTGCTGCGACTGCGAGCCATGACGACGGCAGGAGGCAGCACGCCAAGGAGTGGGCCGA
GGAGAGAAAGAGGATGAGGTGGTTCATGACCAAGGACTACGGCCATCCGAGGCGCCACACGCCGAGGCACAACCGGCTGC
TGTAGAAGAGAAGCTTGCAACATGAGAGAGAAGGCCGACGGCGACGTGGGTCTTTCC-----------------------
---------------------TAGCTAGCTAGCTCATCTCAATTTGGTCCCATGCGTGCAGTCCTGATCCGCACGCAAAT
TTTGAACCCCCCCTGACCAAG----TATTAGAGATGTTATTATTATGAACTTATGATAGTACGCACATTAGATATAGGAG
T-------------------------------------------------------------------------------
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>chr6A_1_TraesCS6A01G210900
CAAGTGCGCTTGGTCTCGAGTCTCGAGCCAGAAGCACTGGGCAACTACATAGTCATTGGAAGCAGCTAGTAGGCTAGTTG
TAATGAGAGTATCATAGGTAGTATCATGCATGCCAACTAGGTAAATTTGATGAGGTGGCATAAAATTAAATGAAGAAAGA
GAAAGTTGAGTATCATATCATGATACCATATCATATTAAATGTTTTGCTACTACTCCCTCCGTTCCTAAATAATTGTCGT
TCTAGCCATCTCAAATGGACTACAACATACGGATGTATGTAGACATGTTTTAAAGTGTAGATTCACTCATTTTGCTCCGT
ATGTAGTCACTTGTTGAAATCTCTAAAAACAATTATTTAGGAACGGAGGGAGTATGTGTCATGCATGCTAATAAATGAAG
TCATCTATAATAATAATATATGATACTATGCACTACGGATGTAGTATCATACACTAATATGATATGCATGATACTAGTAT
ATGATACTTTTCATTTACGACCAGCCGATAGAACACATAGTTAATTCAAGGGGAAACGATGCTTTCGAA---TACCATTT
TGCCGATCGAAAAAGGAACAAAAGTCAGAGTGATCCTCGCTGGAGCAGAAACTTGCTTCCGAGTGCGTGTCTGCAAGACA
TCAAGTTAAATGCCACGTGGTTCTGCTTGGTTGCGCGAAATTGAGCACACGCTGTCGAGCCTTAAACTAATCCTGCAGCT
GCACTTGGACCCAGAAGGAGAGTGCGGCAACCGCAAGGAAGAAAGACTTGGAGTTTGGTTAATTAACCGATGAGCTAGCT
CCAGGAACAAGAGATTCTTCTCGTAGCTAGGACATGCAGTTCTCGGAAGACTAGTTAATTAGGCCAAAGGGCAAAGACGT
CCTTTT-TTCTTTTTGACGGGACAGAGCAACTGTACCCTGAATCTGTGAATTCCTCCAAAATTTCCTACAGTTTGACTGT
CAACTCTGCGCGTTGTTGAAATGCTCTGACATGAGAGGCCTGGCCTATTTATACACACCACCTACCTGCTCCACTCATGG
TGAGGCTGTGAC-TGAGAGCAGAGCACAGAGCGAGGAAAAACGCAGCGATGAGGTTCCTTGGCCTTGTGAGCCTGGTTGC
TCTGATCTTCCTGTTAAGCTTCAGGTCTTTGCTTCACCAGCAAGTGCTCGTTGGTAAGTTCGTAGAGC-AGTAGCCATTG
CTGTTACCTTGAGTAGTTCCTAGTATCTTTGCTGCATGAACATTCATTCACTGTCTGTTACTGAAGAAACAGAAGTTTTT
TTCCCTTCCGTGCAAGGAGAAGGTGCTGCGACTGCGAGCCATGACGACGGCAGGAGGCAGCACGCCAAGGAGTGGGCCGA
GGAGAGAAAGAGGATGAGGTGGTTCATGACCAAGGACTACGGCCATCCGAGGCGCCACACGCCGAGGCACAACCGGCTGC
TGTAGAAGAGAAGCTTGCAACATGAGAGAGAAGGCCGACGGCGACGTGGGTCTTTCC-----------------------
---------------------TAGCTAGCTAGCTCATCTCAATTTGGTCCCATGCGTGCAGTCCTGATCCGCACGCAAAT
TTTGAACCCCCCCTGACCAAG----TATTAGAGATGTTATTATTATGAACTTATGATAGTACGCACATTAGATATAGGAG
TATAAAATGATGTCTCTTTTGGTAGATTCTGTAAGGAGTAC--AGAGTCTCTTG--------------------------
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-------------------------TAGCTTCATGGTTCCCACTATCTTTGATGGCTTATGAAAAATAG-----------
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---TCGCTTTGCTAA-------GTCGGTTATTGTTTCTGCCTGAACTCTGAAGTGAGAGTTCAAAGCTGCGTACAAGCTG
GTTCATATCTTTTCTTTTCTTGAGGAACCTCATCGCGAGGGAAGAAGCTTCTTGCAATTCATTTAGGAGGATAAGAAAAA
CCGGATCC------------------------------------------------------------------------
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----------AAAAATCTAGCATTTTTCGGGTAATTAGG-AAAGACTGAGTAAAAACCTCAA--AAAACACAAGAACAAA
AGAAAAAA----------AAACACTAGAGCTTGGGGACAGGGAATAGGAGAAGAGGAAATACCGATCATTCATTCAATCA
ATGTGCAGTTGATCTATCACTGTACTT-----------------------------------------------------
-------GTATATGAGTCACTGTAAGCCCAAAGTTTTCCCTTGTTTATTTTGGTAATATTACTGTTGCTGCACTGACCCA
CAGTGCAAGTGTCGTTTATCATGGTACCGACAGTTAGTCTTTCCAACTGGGAGAAAGTCGGTGCTATTTGGGTGGCCCAA
GTCCATGGCACGAGGCTTGTGCTCACCGATGTCTCACATGGAATGGACGTGGTCCTTTTACTCCTCTACTAGTAATGATG
TACGTGCAATGCATGTTTATATTAGATAGGATATTAGTTGCACGTTATATTAGGTAAGATATATCTGCTGCATGTTGATA
TTTAGTAGTATATCAATTACTTTTTCGCGGGAATGGTAGGATATTAATTACATGGCAGATTTCATGGGATAGCGTTGAGT
CAAAACGTGTTTATAACCAATAGCAGTGGTGGGTAATTAGAGCATTAAACGTGTTTGATGCTCACCATTGGAGGGATTTG
AACCGTTAAATAACATGATTTGACGGTTGAGATGGTTCGAATCTGCTCCTTTGGGTTTTTTTATAGATTACCAAAGTGTT
ATGGAGCTCGCAGAGTAGGACATGTTTTTA
>chr6D_509
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----------------------------TAGAACACATGGTTAATTCAAGGGAAAACGATGCTTTCGAATACTACCATTT
TGCCGATCGAAAAAGGAACAGAAGTCAGAGTCATCCTCGCTGGAGCAGAAACTTGCTTCCGAGTGCGTGGATGCAAGACA
TCAAGTTAAATGCCACGTGGGTCTGCTTGGTTGCGCGAAATCGAGCATACGCTGTCGAGCCTTAAACTAATCCTGCAGCT
GCACTTGGACCCAGAAGGAGAGTGCGGCAACCGCAAGGAAGAAAGACTTGGAGTTTGGTTAATTAACCGATGAGCTAGCT
CCAGGAACAAGAGATTCTTCTCGTATCTAGGACATGCAGTTCTCGGAAGACTAGTTAACTAAGCCAAAGGGCAAAGACGT
CCTTTC-TTCTTTTTGACGGGACAGATGAACTGTTCCCTGAATCTGTGAATTCCTCCAAAATTTCCTACAGTTTGACTGT
CAACTCTGCGCATTGTTGAAATGCTCTGACATGAGAGGCCTGGCCTATTTATACAGACCACCTACCTGCTCTACTCGTGG
TGAGGCTGCGAC-TGAGAGCAGAGCACAGAGCGAGAAAAAACGCAGAGATGAGGTTCCTTGGCCTTGTGAGCCTGGTTGC
TTTGATCTTCCTCTTAAGCTTCAGGTCTTTGCTTCACCAGCAAGTGCTCGTTGGTAAGTACGTAGATTTAGTAGCCGTTG
CTGTTACCTTGAGTAGTTCCTAGTATCTTTTCTGCATGAC----CATTCACTGTCTGTTACTGAAGAAACAGAAGTTCTT
TTCCCTTCCGTGCAAGGAGAAGGTGCTGCGACTGCGAGCCATGACGACGGCAGGAGGCAGCACGCCAAGGAGTGGGCCGA
GGAGAGGAAGAGGATGAGGTGGTTCATGACCAAGGACTACGGCCATCCGAGGCGCCACACGCCGAGGCACAACCGGCTGC
TGTAGAAGAGAAGCTTGCAACATGAGAGAGAAGGCCGACGGCGACGTAGGTCTTTCCTAGCTGATCCTAGCTACTCCCTC
CGTCCACTGGGACGGAGGGAGTAGCTAGCTAGCTCATCTCAATTTGGTCCCATGTGTGCTGTCCTGATCGGCACGCAAAT
TTTGTACCCCCCTTGACCAAATATATATTAGAGATGTTATTAT--------------------------------AGGAG
TATAAAATGATGTCTCTTTTGGTAGATTCTGTAAGGACTGTGTAGAGTCTCTTG--------------------------
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-------------------------TAGCTTCATGGTTCCCACTATCTTTGATATCTCATGAAAAATAG-----------
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---TCACTTTGCTAATTGCTATGTCTGTTCCTGTCTCTTCCTGAACTCTAAAGTGAGAGCTTAAAGCTGCGTACAAGCTG
GTTCATACCCTTTTTTTTCTTGATAACCTCATGGCATGTCACTTTTCGACCCACCACCGGCACAACCACGTCTGGCGGTC
AGCCGGGCTAAGCACTTGCCCAGCAGCTCGTCGGTTCGCCGCTGTCGGTCATCAAGTGTGATCACTGCCCACGACTGCCG
TTGTGCAGCGTTTCGAGCACACCGAAACATTACGAATGGGTGTTTTTCAAGTGCGAAAAAGGATAAAGTGGGTGCCATTT
TGTACAGTTGTTCTTCGGATTCATCGCAATTTGAAACTCATTGTTTGCTCAAAATTATATGTAAGATGGATGCAAATTTT
GGTATTGGGAAGAAGAGTACATTGATCTATTGATAGTGAGAAATTTGCTAGATATTCGTGCACTACTTGCTACAGATGAG
ACTAGAGAGGGGACGCTAGAGAGGACGCAATGTTCAAGTAAGAGGAAGCGGAGAACAAAGAAGTGTGCAAGCTCGAGAAG
CCAATAGAAAGCAACAACAATATAAACAATCAAGGCATAGACAAAACATTGATCGGAGTAGTAGGAGCAGCTAGGGAAGT
TGTTTTTCTATTAATGTGTGTAATTTTTCTTAT-GGTTTTCTTTGGATCGGTTCTCCTAGCGAAGAATTGGTGAAGTATG
TGACCAAGATGTTGTTTAATACAATAATACAATACTGAAGTTTATGGCGGTGGCA-AAAAATGAATTTGACATAAAAAAC
TCCTTCAAGTTTAAGGACGGTTAGAAACGATTTTTGAAAAGAGCAAATATGATCCTCTAAAGGATACTCGGCGTG----T
CCTCCTTTAAATTTTTGGAAACACTAAAAAAATATGAAGTTGGAGTTTTAATCATGACAAATCTAACATTTTTATGACA-
---ATATATTTGGCACGATTATGACAAATTTAGTGTGCAAACG-----ATTTTCTGACAAAAAGGAAAAGAACTGAGACG
GATTTGCCATGCTCGCCAACTAAATCTGCCATCCTCGGAGAACAAAATTTGCCATGTAAAACAGTCGATCAAATATCTAA
CGTCAGATTTATAGTGGAGTTCTAAAATCGGTTAGAGTTGCTCTTAGAAGAATAGAGATGGTCCAGTCTATGAAAAACTA
GACT-----AAAAAATCTAACATTGCCCTGTTAATTAGG-AAAACCAAGTGAACCCCTCCCTCCAAAAAAAAAGAAACAC
AGAAAACAGGAAAAAAGTAAAAACTAGAGGTTGGGGATAGGGAATAGGAGAAGAC---ATACCGATCATTAATTCATTCA
ATGTCTAGTTGATCTATCAATGTACTT-----------------------------------------------------
-------GTATATGTGTCGCTGTAAG-CCAAAGTTTTCCCTTGTTTATTTTGGCAATATTACTGTTGTTGCACTGACCCA
CAGTGCAAGTGTCGTTTATCACGGTACCGACAGTTAGTCTTTCCAACTGTGAGAAAGTCGGTGCTATTTGGATGGCCCAA
GTCCATGGCACGAGGCTTGTGCTCACCGATGTCTCACATGGAATGGACGTGGTCCTTTTACTCCTCT-------------
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>chr6B_632
AAGACATGAGT---------------------------------------------------------------------
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-----TTAAATGCCACGTGGTTCTGCTTTGTTGCGCGAAATCGAGCATACGCTGTCGAGCTTTAAACTAATCCTGCAGCA
GCACTCGGACCCAGAAGGAGAGTGCGGCAACCGCAAGGAAGAAAGACTTGGAGTTTGGTTAATTAACCGATGAGCTAGCT
CCAGGAACAAGAGATTCTTCTCGTAGCTAGGACATGCAGTTCTCGGAAGACTAGTTAATTAAGCCAAAGGGCAAAGACGT
CCTTTTTTTCTTTTTGACGGGACAGAGGAACTGTACCCTGAATCTGTGAATTCCTCCAAAATTTCCTACAGTTTAACTGT
CAACTCTGCGCATTGTTGAAATGCTCTGACATGAGAGGCCTGGCCTATTTATACAGACCACCTACCTGCTCTACTCATGG
TGAGGCTGCGACTTGAGAGCAGAGCACAGAGCGAGAAAAAACGCAG-GATGAGGTTCCTTGGCCTTGTGAGCCTGGTTGC
TCTGATCTTCCTGTTAAGCTTCAGGTCTTTGCTTCACCAGCAAGTGCTTGTTGGTAAGTTCGTAGAGT-AGTAAACATTG
CTGTTACCTTGAGTAGTTCCTAGTATCTTTGCTGCATGAC----CATTTACCGTCTGTTACTGAATAAACAGAAGTTTTT
TTTCCTTCCGTGCAAGGAGAAGGTGCTGCGACTGCGAGCCATGACGACGGCAGGAGGCAGCACGCCAAGGAGTGGGCCGA
CGAGAGGAAGAGGATGAGGTGGTTCATGACCAAGGACTACGGCCATCCGAGGCGCCACACACCGAGGCACAACCGGCTGC
TGTAGAAGAGAAGCTTGCAACAT----GAGAAGGCCGACGGCGACGTGGGTCTTTCCTAGCTGATC--------------
----------------------------CTAGCTCATCTCAATTTGGTCCCATGTGTGCAGTCCTGATCCGCACGCAAAT
TTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTAGCTTCATGGTTCCCACTATCTTTGATATCTCATGAAAAGTATCTCATGAACTT
TGGGGTGCCGTGTTTCTGGTCCTGAGCTCATCTGCACCCGCCCTGATGAAAAAATCAAAACAAATACTAAAAAAATTCTA
AAAAAATAAATTTTTTGTGTGGTAGATAAGTTTATGCGTCAGATGCGCTCCAAGTTTAAACTCATTTGGACATCTGAGCA
ACTCTCAGCAACAAATTCAACGTTTGTAAAAAAGTTTACTGTTCACACACTGTTCTGACCCGATTTGTTTTTTTTTTTTT
GCTGAGATCTGCTCAGATGTCCAAATAAGTTGAAATTTGGAGCGAACCTCACGCATAAACTTGTCTGTCACACAAAAGAA
ATTGGATATTTTTGAATTCTTTTAGTATTTATTTTGATTTTTTTTGACTGGGTGCAGATGAGCCTAGGCACCGAATTGGG
TTTTCACTTTGCTAATTGCTATGTTTGCA--TGTCTCTTCCTGAACTCTAAAGTGAGAGCTTAAAGCTGCGTACAAGTTG
GTTCATAC-CTTTTTTTTCTTGATAATCTCATGGCATGTCACTTGTCGACCCACCATCGGCACAACCACTTCTGGCGGTC
GGCCGGGCTCAGTACTCGCCCAGCAGCTCGTCGGTTCGCTGCTGCCGGTCATCAAATGTGATCACTGCCCACGACTGTCG
TTGCGCAGCTTTTCGAGCACACCGAAACATACCGAATGGGTGTTTTTCAAGTGTGAAAAAGGACAAAGTGGGTGCCATTT
TGTATGGTTGTTCGTCGGATTCGTCGCAATTTGGAACTCATTGTTTGCTCAAAATTATATGTAAAAT-----CAAATTTT
GGTATTGAGAAGAAGAATACATTGATCTATTGATAGTGAGAAATTTGCTAGATATCGGTGCACTACTTGCTAGAGATGAG
ACTAGAGAGGAG--------------GCAATGTCCAAATAAGAAGAAGCAGGGAACAAAGAAGTGTGCAAACTCGAGAAG
CCAATAGAAAACAACAACAATATAGGCAATGAAGACATAGAGAAAAAATTGATCGGACTAGTAGAAGCAGCTATGGAAGT
TGTTTTTCTATTAATGTGTGTAATTTTTCTTATAGGTTTTCTTTGGATCGGTTCTCTTAGCAAAAAAGTGATGAAGTATG
TGACCAAGATGTTGTTTAATACAATAATACAGTAGTGCAGTTTAAGGCGGTGGCACAAAAATGAATTTGACAAAAGAAAC
TCCTTTAAGTGTAAGGACAGTTAGAAACGATTTTTGTAAGGAGCAAATATGATCCTTTAAAGGATACTCGGCTGTGTCCT
CCTCCTTTAAATTTTCGAAAACACTAAAAATCTGAT--GTTGGAGTTTTAATCATGACAAATCTAACTTTTTTATGACAA
TATATATATTTGGCACGATTATGACAAATTTAGTGTGCAAGCACATCAATTTTCTGACAAAAA----AAGAACTGAGACG
GATTTGCCATGCTCACCAACTAAATCTGCTATCCTGAGAGAAC-AAATTTGCCATGTAAAACATTTGATCAAATGTCTAA
CATTAGATTTGTAGTGGAGTTCTAAAATCGGTTAGAGTTGCTCTTAGAAGAATAGAGATGGTCCAGTCTACAAAAAACTA
GACTAAAAAAAATAATCTAACATTGCCCTGTTAATTAGGAAAAACCAAGTGAACCCCTCCCTCCAAAAAAA--GAAACAT
AGAAAACAGGAAGAAAGTAAAAACTAGAGGTTGGGGATAGGGAGTAGGAGAAGAC---ATACCGATCATTAATTCATTCA
ATGTCTAGTTGATCTATCACTGTATTTGTACTCCCTTCGTTCCTAAAGTTAGTACAGAGTTGAGTCATCTATTTTGAAAC
GGAGGGAGTATATGTGTCGCTGTAAGCCCAAAGGTTTTCCTTGTTTATTTTGGCAATATTACTGTTGTTGCACTGACCCA
CAGTGCAAGTGTCGTTTATCATGGTACCGACAGTTAGTCTTTCTAACTGGGAGAAAGTCGGTACTATTTGGGTGGCCCAA
GTCCATGGCACGAGGCTTGTGCTCACCGATGTCTCAC-----ATGGACGTGGTCCTTTTACTCCTCT-------------
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>SNPs
S-SSSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-------------S---------------------------
--------------------S----------S-------------------------------------SS---------
-----------------------------------------S-----S--------------------------------
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-------------------------------------------------------------S------------------
---------------------------S----------------------------------------------------
-----------S-------------------------------------------S---------------S--------
--------S--------------------------S----------S---------------------------------
-------------------------------------------------------------------S------------
---------------------------------------SSSSS------------------------------------
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------S-------------------------------------------------------------------------
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------------------------------------------------------S-------------------------
----S-------S-------S----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
-------------------------------------S-SS---------------------------------------
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-----------------------------------------------------SS--S----------------------
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-----S-------------------S---SS---S---S----------S---------S-S------------------
-------S-S---S---------SS-S-SSSSSSSSSSSSSSSSSSSSSS-SSS--SSSSSSSS-SS-S-SSSS-SSSSS
SSSSSSS-------------------------------------------------------------------------
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-------------------S----SSS-S-S------------SS-SSSSS--SSS-SS-SS------S-S-----SS-S
------S--------------S-------S-------S----------------SSSS------------S-----S---
----SS--------------------------------------------------------------------------
--------------S---S----------------------------------S-------------S------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_682
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----------------------CTGCTTGGTTGCGCGAAATT--------------------------------------
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>reverse_4321
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ATGGAGCTCGCAGAGTAGGA----------
