>input_sequence_73617
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----------------ACGCGCCGCCACCAAAAACCCTAACCTGCG---CCGCCGCGCTCACAGCAA-CCAAGCACACCG
CCGCAGCCACCATGGCAGCCGTTCTCACCCGCCCGACGCCGGGCACCGTCCAGTGCTTCGGCCGGAAGAAGACCGCCGTC
GCCGTGGCCTACTGCAAACCCGGGCGCGGCCTCATCAAGGTCAACGGCGCCCCCATCGAGCTCATCCGCCCCGAGATGCT
CCGCCTGAAGGCCTTCGAGCCGATCCTTCTCGCCGGCAGGTCCCGCTTCAAGGACATCGACATGCGTATCCGCGTCCGCG
GCGGAGGGAAGACGAGCCAGATCTACTCCATCCGCCAGGCCATCGCGAAGTCTCTCGTCGCCTACTACCAGAAGTACGTC
GACGAGGCGGCCAAGAAGGAGGTGAAGGAGATCTTCGGCCGCTACGACCGGACGCTCCTCGTCGCCGACCCGCGCCGCTG
CGAGCCCAAGAAGTTTGGCGGTCGCGGTGCCCGCGCGCGTTTCCAGAAGTCGTACCGTTGAGCTCCGGCGAGATCTCTTG
TTGGGTATGGCGGCGGTGGCCTACTCCTTGCCTGCCTATCTATCTACCTTTTACCGCTAGTAGTTTGTTTTCTTTTGAAC
CAATGAA-------------------------------------------------------------------------
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>chr4A_1_TraesCS4A01G190200
ATATTACAACATGATCCTCCACTAACAGGCTGAATCTGCCTGCTGGCAGCCGCCAACCAATAAGAGAAAGATTACAGCGC
GCAGCTCCTAACGAAATTAGACACCTTATTATAGATAAACTACACTATAACAGTCTCCAGGTCATGTATTCGTCTCGAAC
AGGAAAACTAGCAA-ATTCCCGCTTCCAAGAGAGCAATCAAAGATTCAACCTGCAGAATAACAATCTGAATTCTGTGTAA
GTTCAGCAAATCAACACCCATAATAACAGATTACTTTCTACTATTATGGATGGTGATTTAGG-AGTATTAGACAAGAGAT
TTAACTCGAATCCGCAAAAAAAAAAAAAAAACCATACTTGATATGCACTTCCGCAGGAAAAATATCCTACTGAACCAAAA
ACATACTGAA-----------------------------------------------------GAGAACAATTTGCTCAG
GAATACAAATAGCAAGCACAAGCAAAAAACGAACAAAAAGAAATCGATCAAAAAAAAGATGAAAACCCTTCGAAGAAAGC
AAGAAAGTAAT-GAGATTGTTTTGTTTGTTGGGTGAGCCCGCGCGGCCATCATCGCGCGCGCTCCGACCGCGGGCAGTCG
TCATCGCTCGCCGCCGGCAGCTGCCGCGGATGCCGCGTCTCTCAACCCAAACGTCGCGCGCCACCTTCCCGCAAGCCCAT
CGTGGACCACGGTGGCGGCGCGGCCGATGGGAGAGACGACTCCGGCCGCCGCGGCGCCGCCGGACGGCTCGCTCGGATAA
GATCAAGTAGTGTTCGGGTCGAAACCCTAGCTTCCTGCTCCTCCCATCGCGCCCTCTTATTGACGACAACAACCCACCCG
TAGGCCATACCATAGAAAGCCCAGTACTTGCAGGCCCACATAAACTCCAATTGATCAGCTCGGCCCATTACCTTCGAGGT
CGGTCCCACATGTCATAGGACGTGCTGCGCGAATGAGGCCGAAACCCTAACGCCTCCACGCTATATAATCGTTCTCTCGC
CGCCGTGATCCCCTCTACGCGCCGCCACCAAAAACCCTAACCTGCG---CCGCCGCGCTCACAGCAA-CCAAGCACACCG
CCGCAGCCACCATGGCAGCCGTTCTCACCCGCCCGACGCCGGGCACCGTCCAGTGCTTCGGCCGGAAGAAGACCGCCGTC
GCCGTGGCCTACTGCAAACCCGGGCGCGGCCTCATCAAGGTCAACGGCGCCCCCATCGAGCTCATCCGCCCCGAGATGCT
CCGCCTGAAGGCCTTCGAGCCGATCCTTCTCGCCGGCAGGTCCCGCTTCAAGGACATCGACATGCGTATCCGCGTCCGCG
GCGGAGGGAAGACGAGCCAGATCTACTCCATCCGCCAGGCCATCGCGAAGTCTCTCGTCGCCTACTACCAGAAGTACGTC
GACGAGGCGGCCAAGAAGGAGGTGAAGGAGATCTTCGGCCGCTACGACCGGACGCTCCTCGTCGCCGACCCGCGCCGCTG
CGAGCCCAAGAAGTTTGGCGGTCGCGGTGCCCGCGCGCGTTTCCAGAAGTCGTACCGTTGAGCTCCGGCGAGATCTCTTG
TTGGGTATGGCGGCGGTGGCCTACTCCTTGCCTGCCTATCTATCTACCTTTTACCGCTAGTAGTTTGTTTTCTTTTGAAC
CAATGAATTGGATATGATCTCTAAGAACTGTGAGTTGTCTGCAGTATCCTGCCTAGTTGACGAAGGGGTTTTGCTATCAT
AATCTTATGTTAATGATGAAACTGAATGTTCTGTTTGAGCTTAACTGTTTGCGAT------------TTGATATTTAGTT
GAATAGGTAAAATGCAGCTTTATTTAGAATCTGTGAATGATATGGCCG----------------TCATTTCTAGTAGCAA
GTATTGCACAAAATGTTTTGCATGTTGGGAGGTGAACA----------------ACGCCTGA------------------
-------------------------------------------TGCTGTGATCGTACC-GATTCTTAGAATATTGTTC--
---CTTATCTATGTGTACTTCCACTTCCAAGATTAAGCATCTCCTTCAGCTGTTGGTAATTGTTTTAGACCCTGCATGTT
GCTATCAGCCTATCATCATTGATACTAATGTTGTGAATTTATCCTGTGATGCCGATTCATGGCCATGTTTATTCGCCATT
GTTTTTTGGTGTTGCTTTTAGTTAAGCATTTCTATCTGGGTTAGATTG-AGGGCCAGCATTTGCTTGGGTCTCTCTGTAG
CTTGGTATTATGCCGCTGCCAGTTTTGGGGCATTTTAATGCCCAATCTGATACCCCAGTGGCATGTTCTTCGCATTATTT
ATGTATTCCTGCCGTCCGAAATTATTTGTTGCGGAAATGGATGTATCTAAAATGT-------------------------
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---------ATTTTGAGTTGAGTATAAAACAGTAACATAACCAAACTCTCTGGCATTTTAT-------------------
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---------------------------------------------------------------------ATGGAAGTT-A
TGCCCT--TGTTTGATGTTACATTGGGCTTATAATTTTGGGTGGTCTTTGTATTTTCATTGACTTAG----TATACGGTG
GGCTCGTAATTTTGTGC-GAGGCAATTTCTATATCCCCTACATGGCTGCATGTCCAGTATACAATGCGCTT---------
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-------------------------------------------------------CTTATTGGGAAGTTGTTCTATCCGG
CCGAGCG-------------------------------------------------------------------------
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---------------------GCCTGGAACTTTGCCGTCTGGGGTCTT--------------------------------
------GAAGAAACCTGCACAACTGTTATTTTCCGGAATCACAAG-----------------------------------
------------------------AAGAAACCTACTGTTATTTCCCAGCAAATTACAAAGAAGA----------------
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>chr4B_1
ATATTACAACAGGATCCTCCACTAAGAGGCTGAATCTGCA---TGGCAGCCGTCAACCAATCAGAGAAAGATTACAGCGC
CCATCTCCTAAAGAAATTAGACACCTTATTATAGATAAACTATACTATCACGGCCTCCAGGTCATGTATTCGTCTCAAAC
AGGAAAACTGGCAC-CTTTCCGCTTCGAAGAGAGCAATCAAAGACACCTG---------------CAGAATTCTGTGAAA
TTTCAGCAAATCATCATCCATATTAGCATATTACTTCCTACTATTATGGATGTTGATAT-GG-AGTATTGGACAAGAGAT
TAAACACGAATCCGCAGGAAAAAAAAACCCATACTACTTGATATGCACTTCCGCATGAAAAATATCCCACTGAACAAAAA
AAT---TACTGTACCCACTAAAAATATCTTCTTAGAAGAAACTTGGTTAGAACCCAAGAAACGGATAACAATTTGCTCAG
GAATACAAATAGCAAGCACAAG--AAAAACGAACAAAAAGAAATCGATCAAAAAAAAGATGAAAACCATTCCAAGAAAGC
AAGAAAGTAATGGAGATTGTTTTGTTTGTTGCGTGAGCCCGCGCGGCCATCATCGCGCGCGCTCCGACCGCGGGCAGTCG
TCATCGCTCGCCGCCGGCAGCTGCCGCTGATGCCGCGTCTCTCAACCCAAACGTCGCGCGCCACCTTCCCGCAAGCCCTT
GCTGGACCGCGGTGGCGGCGCGGCCGATGGGAGAGAAGACTCCGGCAGCCTCGGCGCCGCCGTACGGCTCGCTCGGATAA
GATCAAGTAGTGTTCGGGTCGAAACCCTAGCTTCCTGCTTCTCCCATCGCGCCCTCTTATCGACGACAACAACCCACCG-
TAGG-----CCATGGAAAGCCCAGTACTTGGAGGCCCGCATAAAGTCCAATTGACCAGCTCGGCCCATTACCTTCGAGGT
CGGTC-CACATGTCATAGGAAGTGCTGCGCGAGTGAGGCCGAAACCCTAACGCCTCCACGCTATATAATCGTTCTCTCGC
CGCCGTGATCCCCTCTACGCGCCGCCACCCAAAACCCTAACCTGTG---CCGCCGCGCTCACAGCAA-CCAAGCACACCG
CCGCAGCCACCATGGCAGCCGTTCTCACCCGCCCGACGCCGGGCACCGTCCAGTGCTTCGGCCGGAAGAAGACCGCCGTC
GCCGTTGCCTACTGCAAGCCCGGGCGCGGCCTCATCAAGGTCAACGGCGCGCCGATCGAGCTCATCCGCCCCGAGATGCT
CCGCCTGAAGGCCTTCGAGCCGATCCTGCTCGCCGGCAGGTCCCGCTTCAAGGACATCGACATGCGCATCCGCGTTCGCG
GCGGCGGGAAGACGAGCCAGATCTACTCCATCCGCCAGGCCATCGCCAAGTCTCTCGTCGCCTACTACCAGAAGTACGTC
GACGAGGCGGCCAAGAAGGAGGTGAAGGAGATCTTCGGCCGCTACGACCGGACGCTCCTCGTCGCCGACCCGCGCCGTTG
CGAACCCAAAAAGTTTGGCGGTCGCGGTGCCCGAGCGCGTTTCCAGAAGTCGTACCGTTGAGCTCCGGCGAGATCTCTTG
TTGGGTATGGCGGCGGTGGCCTACTGCTTGCCTGCCTATCTATCTACCTTTTACCGCTAGTAGTTTGTTTTCTTTTGGAC
CAATGAATTGGATATGATCTCGAAGAACTATGAGTTGTCTGCAGTATCATGCCTAGTTGACGAAGGGGTTTTGTTATCAT
AATCTTATGTTAATGATGAAACTGAATGTTCTGTTTGAGCATAACTGTTTGCGAT------------TTGATATTTAGTT
GAATAGGTAAAATGCAGCTTTATTTAGAATCTGTGAATGAAATGTTTCTAGTAAGTATTGCCCATCATTTC---TAGTAA
GTATTGCACGAAATGTTTCTCATGTTGG-AGGTGAACAAAACATGCATGGCCTCACGCCTGA------------------
-------------------------------------------TGTTGTAATA------GATTCTTAGAATATGGTTCCT
TATCTTATCTATGTGTACTTCCACTTCCAAGATTAAGC--CTCCTTCAGCTGTT-GTAATTGTTGAAGACCCTGCATGTT
GCTATCAGCCTATCATCATTGATACTGATGTTGTGAATTTATCCTGTGATTCCCATTCATGACCATGTTTATGCGCCATT
GTTTTTTGGTGTTGTTTTTAGTCAAGCATTTCTATCTGGGTTAGATTG-AGGACCAGCACTTGCTCGGGTCTCTCTATAG
CTTGGTATTACGCCGCTGCCAGTTTTTGGGCATTTTAATGCCCAGTCTGATACCCCAGTGGCATGTTCATGTCATTATTT
ATGTGCTGCCG---------------------------------------------------------------------
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------------------------------------------------TCCGGCCGTTTAT-------------------
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---------------------------------------------------------------------ATGGAAGTT-A
TGCCCTTGTGTTTGATGTTACATTGGGCTTGTAATTTTGGGTAA------------------------------------
------TAATTTTGTGC-GAGGCAATTTCTATATCCCCTACATGGCTGCATGTCCAGGGCACAATGCGCTT---------
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-------------------------------------------------------CTTATTGGGAAGTGGTTCTATCCGG
CCGAGCG-------------------------------------------------------------------------
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---------------------GCCTGGAACTTTGCC--------------------------------------------
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------------------------------------------------------------------------
>chr4D_2
-TATTACAACAGGATCCTCCACTAACAGGCTGAATCTGCA---TGGCAGCCGTCAACCAATCAGAGAAAGATTACAGCGC
GCAGCTCCTAAAGAAATTAGACACCTTATTATAGGTAAACTATACTATCACAGTCTCCGGGTCATGTATTCGTCTCAAAC
AGGAAAACTGGCACCCTTCCCGCTTCGAAGAGAGGGATCAAAGACACCTGCAGAATAATAATAATCAGAATTCTGTGAAA
TTTCAGCAAATCAACATCCATAATAGCATATTACTTTCTACTATTATGGATGTTGATATATGTAGTATTGGACAAGAGAT
TAAACACGAATCCGCAAAAAAAAAAAACCCATACTACTTGATATGCACTTCCGCATGAAAAATATCCTACTCGACAAAAA
ACATACTACTGTACCCACTAAAAATATCTTCTTAGAAGAAACTTGGTTAGAACCCAAGAAACGGAGAACAATTTACTCAG
GAATACAAATAGCAAGTACAAG--AAAAACGAATAAAAAGAAATCGATCAAAAAAAAGATGAAAACCCTTCCAAGTAAGC
AAGAAAGTAATGGAGATTGTTTTGTTTGTTGGGTGAGCCCGCGCGGCCATCATCGCGCGCGCTCCGACCGCGGGCAGTCG
TCATCGCTCGCCGCCGGCAGCTCCCGCGGATGCCGCGTCTCTCAACCCAAACGTCGCGCGCCACCTTCCCGCAAGCCCAT
GGTGGACCACGGTGGCGGCGCGGCCGATGGGAGAGAAAACTCCGGCTGCCGCGGCGCCGTCGGACGGCTCGCTCGGATAA
GATCAAGTAGTGTTCGGGTCGAAACCCTAATTTCCTGCTCCTCCCCCGGCACCCTCTTATCGACGACAACAACCCACCCA
TAGG-----CCACAGAACGCCCAGCACTTGGAGGCCCACATAAAGTCCAACTGATCAGCCCGGCCCATCACCTTCCAGCT
TGGTCCCGCATGTCATACAAAGTGCTGCGCGAGCGCGGCCGAAACCCTAACGCCTCCACGCTATATAATCATTCTCTCGC
CGCCGTGATCCCCTCTATGCGCCGCCACCCAAAACCCTAGCCAAGCACACCGACGCGCTCACAGCAG-CCAAGCACACCG
CCGCAGCCACCATGGCAGCCGTTCTCACCCGCCCTACGCCGGGCACCGTCCAGTGCTTTGGCCGGAAGAAGACCGCCGTC
GCCGTGGCCTACTGCAAGCCCGGGCGCGGCCTCATCAAGGTCAACGGCGCGCCGATCGAGCTCATCCGCCCCGAGATGCT
CCGCCTGAAGGCCTTCGAGCCGATCCTGCTCGCCGGCAGGTCCCGCTTCAAGGACATCGACATGCGTATCCGCGTCCGCG
GCGGAGGGAAGACGAGCCAGATCTACTCCATACGCCAGGCCATCGCCAAGTCTCTCGTCGCCTACTACCAGAAGTACGTC
GACGAGGCGGCCAAGAAGGAGGTGAAGGAGATCTTCGGCCGCTACGACCGGACGCTCCTCGTCGCCGATCCACGCCGCTG
CGAGCCCAAGAAGTTTGGCGGTCGCGGTGCCCGCGCGCGTTTCCAGAAGTCGTACCGTTGAGCTCCGGCGAGATCTCTTG
TTGGGTATGGCGGCGGTGGCCTACTCCTTGC------ATCTATCTACCTTTTACCGCTAGTAGTTTGCCATCTTTTGGAC
CAATGAATTGGACATGATCTCTAAGAACTGTGAGTTGTCTGCAGTATCCTGCCTAGTTGAAGAAGGGGTTTTGTTATCAT
AAACTTATGTTAATGATGAAACTGAATGTTCTGTTTGAGCTTAACTGTTTGCGAT------------TTGATATTTAGTT
GAATAGGTAAAGTGCAGTTTTATTTAGAATCTGTGAATGATATG----------------CCCATCATTTCTAGTAGCAA
GTATTGCACAAAATGTTTTGCATGTTGG-AGGTGAACAA----------------CGCCTGA------------------
-------------------------------------------TGCTGTGATCGTACCCGATTCTAAGAATATGGTTC--
---CTTATCTATGTGTACTTCCACTTCCAAGATTAAGCATCTCCTTCAGCTATTGGTAATTGTTGAAGACCCTGCATGTT
GCTATCAGCCTATCATCATTGATACTAATGTTGTGAATTTATCCTGTGATGCCGATTCACGA-CATGTTTATGCGCCATT
GTTTTTTGGTGTTGCTTTTAGTCAAGCATTTCTATCTGGGTTAGATTG-AGGTCCACCACTTGCTCGGGTCTATCTGTAG
CTTGGTATTACGCCGCTGCCAGTTTTTGGGCATTTCAATGCCCAATCTGATATCCCAGTGTCTAGAAATGGACTCATC--
---------------------------------------------TCTAAAACGT-------------------------
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---------ATTTTTAGTTGAGTATAAAACAGTAACATAACCAAACTCTCTGGCCGTTTAT-------------------
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---------------------------------------------------------------------ATGGGAATTTA
TGCCCTTGTGTTTGATGTTACATTGGGCTTATAATTTTGGGTAGTCTTTGTATTTTCATTGACTTGTTGATTATACGGTG
GGCTCGTAATTTTGTGCAGAGGCAATTTCTATATCCCCTACATGGCTGCATGTCCAGTACACAATGCGCTT---------
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-------------------------------------------------------CTTATTGGGAAGTGGTTCTATCCGG
CCGAGCG-------------------------------------------------------------------------
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---------------------GCCTGGAACCTTGCCCTCTGAGGTCTTAAAATTTGCACAACTGTTATTTCCTAGAAAAT
CACAAGGAAGAAACCTGCGCAACTGTTATTTCCCAGAAAAT---------------------------------------
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>chr4A_1031
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-------------------------------------------------CCACCGCGCTCACAGCAATCCCAGGACACCG
CCGCAGCCACCATGGCAGCCGTTCTCACCCGCCCGACGCCGGGCACCGTCCAGTGCTTCGGCCGGAAGAAGACCGCCGTC
GCCGTGGCCTACTGCAAGCCCGGCCGCGGCCTCATCAAGGTCAACGGCGCCCCCATCGAGCTCATCCGCCCCGAGATGCT
CCGCCTCAAGGCCTTCGAGCCGATCCTGCTCGCCGGTAGGTCGCGCTTCAAGGACATCGACATGAGGATTCGCGTCCGCG
GCGGCGGGAAGACGAGCCAGATCTACTCCATCCGCCAGGCCATCGCCAAGTCCCTCGTCGCCTACTACCAGAAGTACGTC
GACGAGGCGGCCAAGAAGGAGGTGAAGGAGATCTTCGCCCGCTACGACCGGACGCTCCTCGTCGCCGACCCGCGCCGTTG
CGAGCCCAAGAAGTTCGGCGGTCGTGGCGCCCGCGCGCGTTTCCAGAAGTCTTACCGTTGATCTC-TGCGAGAAGTCCTC
TTGGGTATGGCGGTGGTGGCGTACTGCTTGTCTACTTATCTATCTACATTTT-CTGCTAGTAGTTTCCCATCTTTTGGTC
-GATGAAATGGATTCTGAGGTGCCCGTGCAATATCATTTTGCT---TCATGCCTAGTTA---AAGGGATTATGCTATGTT
TATCTTATGTTAATGATGAGACTG--------------------------------------------------------
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>chr4B_1031
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-------------------------------------------------CCGCCGCGCTCACAGCAA-CCAAGCACACCG
CCGCAGCCACCATGGCAGCCGTTCTCACCCGCCCGACGCCGGGCACCGTCCAGTGCTTCGGCCGGAAGAAGACCGCCGTC
GCCGTGGCCTACTGCAAGCCCGGGCGCGGCCTCATCAAGGTCAACGGCGCGCCGATCGAGCTCATCCGCCCTGAGATGCT
CCGTCTGAAGGCCTTCGAGCCGATCCTGCTTGCCGGCAGGTCCCGCTTCAAGGACATCGACATGCGCATCCGCGTTCGCG
GCGGCGGGAAGACGAGCCAGATCTACTCCATCCGCCAGGCCATCGCCAAGTCGCTCGTCGCCTACTACCAGAAGTACGTC
GACGAGGCGGCCAAGAAGGAGGTGAAGGAGATCTTCGGCCGCTACGACCGGACGCTCCTCGTCGCCGACCCGCGCCGCTG
CGAGCCCAAGAAGTTCGGCGGTCGTGGCGCCCGCGCGCGTTTCCAGAAGTCTTACCGTTGATCTC-TGCGAGAAGTCCTC
TTGGGTATGGCGACGGTGGCGTACTGCTTGTCTACTTATCTATCTACCTTTTGCGGCTAGTAGTTT--------------
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>chr4D_1034
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----------------------------------------------------CCGCCCTCACAGCAA-CCAAGCACACGG
CCGCAGACACCATGGCAGCCGTTCTCACTCGCCCGACGCCTGGCACTGTCCAGTGCTTCGGCCGGAAGAAGACCGCCGTC
GCCGTGGCCTACTGCAAGCCCGGGCGCGGCCTCATCAAGGTCAACGGCGCGCCCATCGAGCTCATCCGCCCCGAGATGCT
CCGCCTCAAGGCCTTCGAGCCGATCCTGCTCGCCGGTAGGTCGCGCTTCAAGGACATCGACATGCGGATTCGCGTCCGCG
GCGGCGGGAAGACGAGCCAGATCTACTCCATCCGCCAGGCCATCGCCAAGTCGCTCGTCGCCTACTACCAGAAGTACGTC
GACGAGGCGGCCAAGAAGGAGGTGAAGGAGATCTTTGGTCGCTACGACCGGACGCTCCTCGTCGCCGACCCGCGCCGCTG
CGAGCCCAAGAAGTTCGGCGGTCGCGGCGCCCGCGCGCGTTTCCAGAAGTCTTACCGTTGATCTCCTGCGAGAAGTCCTC
TTGGGTATGGCGGTGGTGGCGTACTGCTTGTCTACTTATCTATCTACCTTTTGCGGCTAGTAGTTTCCTATCTTTTGGTC
-AATGAAATGGATTGTGAGGTGCCCGTGCAATATCATTTTGCT---TCATGCCTAGTTA---AAGGGATTATGCTATGTT
TATCTTATGTTAATGATGAGACTGGACGTTC-------------------------------------------------
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>chr5B_1107
AAGGCCCTG-----------------------------------------------------------------------
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----------------GAGCCGATCCTGCTCGCCGGGAAGTCCCGCTTCAAGGGCATCGACATGAGGATCTGCGTCAGCG
GCGGCGGCAAGGTGAGCCAGGTCTACTCGATCCGCCAGGCCATCGCCAGGGCGCTCGTCGCCTACAACCAGAAGTACGTC
GACGAGGCGGCCAAGAAGGAGGTCAAGGAGATCCTCGGCCGCTACGACCGCACGCTGCTCGTCGCCGACCCGCGCTGCTG
CGAGCCCAAGAAGTTCGGCGGCCGCGGCGCCCGCGCACGCTTCCAGAAGTCGTACCGTTGAGCTCCCCTGTCGGACGAGA
CCCCTCGTCTTTTTGCGTATTATGC-------------------------------------------------------
--------------------------------------------------------------------------------
TATCTTAGGTTAATGATGAGATCGGATGTCCTGATAGGTTTTGTTACTTGTTTCGACCTGTTTGAGCTTGATTTTTAGTT
GAACACAAGATAGATGATGAATCTTTATATAATCCAGTGATGTGATATTCCAATCGTACCTTTTGTGGAGTGCTGTGTTT
ATATTGGATATCTTGCCAACCATCGATCATAGCATTTTTTTTCCTTTGTCATAAATCATCATAACCAACATAACATGGAG
GTTAACTAGCTGCTACCGTCATGTTATATGTAGGCGTATGCCCTGCTGTGATCTTATATCTATCATCGCAGTTATGGTGG
CTCATGACCAA---------------------------------------------------------------------
----------------------------------------------------------------------------CCTT
GTGCTTTGGTTTTGG-TTTAGTTAGGCACTTGTACCTGGATTAGCTTACAGGGCCAGCATTTCCATGGGAGATTTGTTAT
TCATTCATTGT---------------------TTATGATGCCCATTCTAGTTGATTGTTA--------------------
--GTACTCCATCCGTCCGGAAATAATTGTCATCAAAATGGATAAAAGGAGATGTATCTAGACGTATGCAAGAAGACAAAC
CAGTGGCACGACTATGAGTTTTTTTCCCCATAACCAGCAATTTTCGTAATTAACCAAATTCGCTATGCCCTTGCTGCCTC
ATCTGCCAAGATTCAGCAAGGTTTTCTCATTTGTTGGAACCCCTCGTGCATATTTAAGTTTTGTTTTGGTTTTGAGGAAA
TGATTGTCAACTGTAAGGTGATTAAACAATAGTTACATAACAGAAACAGGCAGACGATAACCAAAAATGTTATGTTGCTA
CACAATCTGCTAGGCTCCCGTCCTCCTACTTCTGGTCTTGTCATGGTCAACAACATGATGCTAGGTGATGTTGTTGCTAC
TGCCGCTGCTTCCATTTGTGATACGAGCCGTGGCGCCATCATCTACCTCAAATTGGCAGCGACTAACCACATTGAGACCA
ATTTGTGTGCACGGGGGCTCTCGGAGCCCATGGGGGCGTGGTGAGTGATCACGACGACATCGTGACAATCATGTGATAGA
AATGGAAGCCCTAATGCCTCCATGTTATATATAAAATCGTCGCGGCCGCCACCCAAAACCCCAGCAACCATGTACTTTCT
TCGTTCCTAAATGTAAGTCTTTATAGAGATTCCACTATAAACAACATACGGATGTATATAGATGCATTTTAAGTTTAGAT
TCATTCATTTTGCTTCGTATGTAGTCCATCTAATGCAATCTCTACAAAGACTTATATTTAGGAAAGGAGGGAGTAGCTGC
CATCCTTGCACGCCTAACAACGTCCAGTGCTTCTTAAAGGAAATTATGCTGAAATTGGGTTTCAAAGAGAGTTGGGTGAA
CTTAATTATGAAATGTGTATCCTCTGTGGAGTACCGGGTCCGTATTAATGATGATGAGACGGAGAGTTTTAAACCAACTA
GAGGATTGAGGCAGGGAGATCCCCTTTCTCCCTATTTATTCTTAGCACAGAGGGTTTGACCGCCCTGTTAGTTAATGCGG
AGGAGAATGGAAACATTTCCGGTATAAAGGTTTGCAGAGATGCCCCATCAATTTCTAATCCCCTCTTTGCTGATGACTCT
TTAATCCTTATGCGAGCCAATCCCATGAGCGCGGAGGCGTTGAAATCACTCTTGGATTCGTATTGTGCCGCCTCGGGGCA
AATGGTTAGTGTTGAAAAATCTAATATATTCTTTAGTCCCAATACTAAAGTGGAAGACAAGGCACAAATATGTACAATTC
TAAATATTATGACCGAAGCCCTCAATGACAAATACTTGGGTTTGCCGGCAAATGTGGGCATGGACAAAAGTGACTGTTTC
CAGTTCCTGATCGATCGAATTATTATGAAAATTAGTGGATGGAAGAAAAAATTGTTATCCTCTGGAGGGAAGGAAATT-A
TGCTCA--AATCTGTTGTACAAGTCATCCCCACCTATGCCATGTCCGTCTTTAAAATTCCTAGAAAAATCTGCAAAGGAA
TTATTGATGCGATGTCGCAATTTTGGTGGGGTGACGAGGACAACCAAAAGAGGATGCATTGGATGGCATGGTGGAAAATG
TGTGTTCTAAAAGATCAAGGAGGTATGGGCTTCCGAGATATACACTGTTTCAACCTGGCTCTATTAGCTAAACAAGAGTG
GCGTCTTCTTGATAATCCTGAATCTTTATGTGCAACCATACTGAGAGTTAAATATTTCCCTGAGGGAGATTTGATGAACG
CAAGGTTAAAGAAGGGATCTTCGTTTACTTGGCAAAGCATTATGGCGGGAGTGAACTCTTTAAGAAATGGTTATATCTGG
CGAGTTGGAAATGGACAAAACATTGATATTTGAAGAGATGCATGGATTCCGAATTGTGCGAGTAGGAAAATTATTACTCC
TAGAGGTGGGCAACTTCTGTCAAAGGTGGCTGATCTTATTGATCCAACCACGAATTCTTGGGATGAAGATTTGGTGAGAC
AAACTTTGTGGCCAATTGATATGCAAAGGGTCCTCGCGATTCCCCTTACTATGCATAATATGTCGGATTTCATTGCCTGG
AGCTATACAAAAAATGGTGTATTCACTGTTCGATCAGCTTATTCGGAGGAATGGAACCAACAACACGGGAGGAAATTGCA
ATATACTAATGGTATGGGTCGTACCAATGTCAATCCTATTTGGGAAAGATTTGGAAATTATCGTGTCCGGCAAAGGTAAA
AATATTTATCTGGCGAACGTTGCATGGAACTCTACCGTGTCGTGTTACACTTGCCAATAGACATATGAAAGTTTCGCCCC
TTTGTCCATCATGCTCAAATGGGCAAGAAGATACAAAACACATCTTGTTTTTGTGTGAGAAGGCAAAAGAGGTTTGGGGT
AAGCTGGGGATGTACGAGGTAATTAAGAAAGCTTGTGTTATTGATCGTGCTGGTGAGGCGGTTCTTGAATTCTTACTTCT
TATGCCGCACCAAGAACTATCTATATTAGGATGCCAGAATGCAAGTGAATTAATCGCGATAACCGCTTGGTATTTATGGT
GGGAGAGACGCATGTTGGTTCATGAAGGGAAGTCTCAAGGTGTGAACCAGATTTCGATGGGGGTTCGTGCTATAACGGCA
AACTATGTGAATGCCCACTCACCTAGTGCATCTAGTAGAAAAGAAGGATGGAGCAGACCTCCTATGGGTTTTGTTAAACT
AAATGTTGATGTTTCTTTTGACCATGATCTGCTCAGGGGCACGGTAGGTGCTGTACTCAGAGATGACAAAGGAAAATTCA
TTGTTGGCGGAAATGGGAAGATCGATTGGTGTGCTGATGTACTAACAACAGAAGCGATGGCTCTGAGGTTTGGTTTAATT
CTTGCACAAAAGGCGGGATGCAATCGTCTTATTATTAACTCTGATAATATGGAAGTCATTGACACAATGAAAAATGGAGG
ACAATCGGCGGGAGTTGCGGCGGCAGTATTCGAGGATTGCTACTTCATGGCATGTGATTTTCCGTTGACTAGATTTGAAC
ATTGTAATAGGACAGCTAATAAGGTTGCTCATGAACTTGCTAGGCTAGCGAAAGTTTCTGTAACTAGAGATTGGTTTGAG
GAGCCTATGAAGAATATTGTACCTCTTCTTATAAACGATGTAACCATTATTTCCAATCAATAAAGTGCACGTTTTCTTTC
AAAAAAACAACGTCCAGTGCTTCGGCAGGAGGAAGATCGCAATGGCCGTGCCCACTGCAAGCCCGGCCGCGGTCTTGTCA
AGGTCAGCGGTGCGCCGATTGACCTCATCCGCCCCGAGATGCTCCACCCCAAGGCCCTGGGGCCGATCCTGCTCGTCCGG
AGGTCCCGCTTCATGGGCATAGACATTAGGATCCGTGAGCCAGGACTACTCGGTCCGACAGGCCATTGCCAAGGCGCTCG
TCGCCTACAACCAGAAGTACACTGACAAGGCGGCCAAGAAGGAGGTGAAGGAGATCCTCGGCCGCTACGACC
>SNPs
-----------S---------------------------SSSS---------S--------S------------------
-----------S------------------------------S-----S---------------------------S---
---------S---S-S----------S-----------------SS-SSS-S-S-S-----S----S----------S--
S---------------S--------S--S-----------------------S----S-----------S----------
-S---S---------------------SSS-SSS---------------------S-------------------S----
-------SSS----------------------------------------------------------------------
----------------------SS-----------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----------------------------------S---------S---------------------------------
------------------------------------------------------------S------------------S
----SSSSS---------------------S-------------S-----------------------------------
--------------------S-----------S-----------------------------------------------
-----------------------------S--------------S-----------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------SSSS--------------------------------
----------------------------S---------------------------------------------------
-------------------------------------------------------------------------S------
----------------------------------------------------------------SS--------------
-------------------------------------------------------------S----------S-------
--------------------------------------------------------------------------------
--------------------------S-------------------------------------------SS--------
-----S---S--------S--S--S----SSSSS--------SS--------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------------------SS------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---SSSSSSS-----------------------------------
------------------------------S--SS-------SSS-SSSSSSS-SSSSS-SSSS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_861
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CCCATCGCGCCCTCTTATT-------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_1949
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------GAGGTGAACAACGCCTGATG--------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
