>input_sequence_73616
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--------------------------------------------------------------------------ATGCCA
CCCAACACGGTTTGCAGTCCGTCACAACCATCCGATAACTCACGCCATACACTACAGGGTGGTCACCAACAGGAATCTGA
GGTGCTGCTATTATGCACGGTT----------------------------------------------------------
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-----------------------------------------ATGGTGAGATTGAAACTACATAATACTTATACTTC---T
A----TACCGCGTCTCA-TTTTCTTCTAGGCTAGATATTCATTGACTGATATGATTTTTT-ATGTTAGG----ATAAACA
GCGACGATTTTGGATAATCTGGTCTAAGAGCTTCTGGAG----AAAAAAAAT-----CCTAATCAACCAGTTTGGCAAAA
ACAATGCTAAGATTAAGTTCAGCAAGGGAGCTGAACAACCTTTTACAGTATCCACTCTCA-CAAA--------TACTATG
GTTGGTAGTTGTTTGCCCTCTCCTG-ATCGAGATGAATTATGGATGTCTGTTGTTCCACTGATAGATTGGTT--------
----TGATTTTTCAGGCCTGGTAAACAACAAGGTAGCCAGCTGCTAATAAAGACAAGCCCATGAGGAGAACTGGATA---
---TAATGTTAACTCATGTTCAACTGTTTTGCCTTTTCCCCTGAAGCTTTGCAACTGCGAG-GCTCCAGTCTCTGTTGAT
CTTAATGTAAGACCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------GGAGATGAAGTGATGGAGATG-----------------------------
----------------------AATTTAGCATTTTAA-------------------------------------------
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----------------
>chr4A_1_TraesCS4A01G150200
AGCATGGCCGGTTGTGGTGCACGTCAACGGGTAGAACCGAAGTAGGAGAGGGGGGAGGGGACTGTAGGCGGCAGTTCACC
AGGGTGCATGGGCTGGAGGTGGGCGGCGCACTAGGGGAGGCGGCGGGCCGCGGAGATGCATGGCGGCAGGGTGGAGTTGG
CGATGTTTCGGGGTGGGGATGCGCCGCAAAGGAGGCGGGGTTGGGGGAGGCGATGCAGCGGCGCGGGGGAGGAGGCGGGG
TTGGGGGTTGCGCGGCACCGCAGCGGAGGAGGCGGGATTGGGGGCCAGGAGGGGCGACACATCTACTACCACTACAAAAG
GAAGAGATGGGCAGATCTAAACAATCACATCCATTCATCATTAAAATCTAATGGCCCTAAATCCTTCTGTGTTTAACACT
ACCAACCACACATTAAGCCACAGTCGATCGATCGCTAATCTGCCCCGCATTAAAAAATAAATAAAACCGCCCGCACGACC
TCCCCTTTCTCCCGCATGACCTCCTTCTCCTCTCGCGCCGTTCGCCTCCCGCAGCCACGCCCTTCGCCGCAGCCTCGCGC
CGAGCCACGGGAAGTCGTGCCCTTCACCGCCGCCTCGCGCTGTCGGAGCCACAGGAAGCCGCCGCAGGTCGCCGGGAGCC
TCCCCAGCCGCGGAAGCCCACCCCCACCGCAGGTTGCTGCCTCCCCAGCCGCCGGAGCCGCCCCCGCTGCTGTTCACCGC
CTCCGAAGCCACAGCTTGGCCGCCGCCA----------------------CTCTGCCTCCACCATGCCGCCACTCCGCTG
GAGTCGCAAGTAAGCTTCTATTGCTGAACTCATCTACACTGAGACCAAGCAAACCAATTTCGTAGCCGCGGGAGCCACCG
CCGGGAAGCCGCCCGTCGCGCCTTCCACCGCGGGAGCCACCGCGCCCTTCGCCGTGGGGGAG------------CCGCCG
CGCGAGCCGCCCGCCGCGCCCTTCGCTGCCAGAGCCGCTCAGCTTGGCCTCTGCCGCGGGGACAACTTGCCCTCATGCCA
CCCAACACGGTTTGCAGTCCGTCACAACCATCCGATAACTCACGCCATACACTACAGGGTGGTCACCAACAGGAATCTGA
GGTGCTGCTATTATGCACGGTT----------------------------------------------------------
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-----------------------------------------ATGGTGAGATTGAAACTACATAATACTTATACTTC---T
A----TACCGCGTCTCA-TTTTCTTCTAGGCTAGATATTCATTGACTGATATGATTTTTT-ATGTTAGG----ATAAACA
GCGACGATTTTGGATAATCTGGTCTAAGAGCTTCTGGAG----AAAAAAAAT-----CCTAATCAACCAGTTTGGCAAAA
ACAATGCTAAGATTAAGTTCAGCAAGGGAGCTGAACAACCTTTTACAGTATCCACTCTCA-CAAA--------TACTATG
GTTGGTAGTTGTTTGCCCTCTCCTG-ATCGAGATGAATTATGGATGTCTGTTGTTCCACTGATAGATTGGTT--------
----TGATTTTTCAGGCCTGGTAAACAACAAGGTAGCCAGCTGCTAATAAAGACAAGCCCATGAGGAGAACTGGATA---
---TAATGTTAACTCATGTTCAACTGTTTTGCCTTTTCCCCTGAAGCTTTGCAACTGCGAG-GCTCCAGTCTCTGTTGAT
CTTAATGTAAGACCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------GGAGATGAAGTGATGGAGATG-----------------------------
----------------------AATTTAGCATTTTAACAAATCAAGCGGTCAAGCCACCAAATCATGATCCTTTAATTTT
ACAGTA-CAACTTCGAAAGGATGAGATACTTTTGGTTGCATGCTTAACGACAACTATTTGGTA------CCACTCAAACT
GGACACCGAAGCAATTTTGAACTCATGTCAAACATGTTTGCTATTTCCTGCAATTTTTCCCTTTTATTTCTGCATGAACT
CCTCAGTATGTACTTCCTGTTGCTATATAGTTTTTCCATATGCAATCTGTGGACGATCACACTCAGAAGTACAGTCGATG
GCTCTATATTTTTTAACTTGTCAGCTACCTTTAAAGCGAATGTGACGATGAAAACTTACCATCAGTGCACTTTTCTATAT
ATTATGTTTTGACATCCCTACTAAATTGCTAAGCCAGCGAGGATAAAAGATTGCCTTGCCTTTTTCCTTTTTCTCTGTAC
TGATAAGAACCCGGTTGTTTTCCTCCTCTCATGGCCCTGTTAAGTATAGTC-----------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------AATAAACCTTTTCCTCTTATT
TTTGACACGATCTCTGTTGATGCAG---GTCATTTTACTAATTTGAAAAGGTTGGCCGCTGAGAACTTCATTTATGCGCA
TAGACCATCCATGGATTAGATAGGATGTACGATGTAGTGGCTACATCGACCGCCCCGAGCTTGCTAATGACTTTGGCCGG
GCAGATGATGCCTTTGTGCAACATTGCATTGTTGTCGTACACACACTCCAAAACTGACAAAATAATTTGACCATGTGTGC
ATTTTCAATCTCTAAATCTCTGATTGCTGATGATGTGAAGGATGGTTGAAAGAACAAAAATGCCTTACTGTTTAGTACTG
CTCAAATTTGGGTAAACAGTGTAGACCTGCACACCCTTTGAATGGCACAAAGAAAACATATAGAAGTT-TATGGTCGTAT
ATCGAGTTTATTATACTGTGAGCAATTGGAGATTTGACCATTTCTATCAGTTATGGGTTAGTGAGGACAAATTGGGGCGT
AAATCTGGATGATTTT
>chr3B_301
--------------------------------------------------------------------------------
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------------------------------------------------------------ATCTACTATCACTATAAAAG
GAAGAGAGGGGCAGGTCCAAACAATCATATTCATTCATCATCAAAATCTAATGGCCCTTATTCCTTCGGTGTTTAATGTT
AGCAACCATGCATTAAGCCATGATCGATCGCTCTCTAATCTGCCCCGCGGTAAAAAAGAAACAAAACCGCCCGCACGACC
TCCTC---------------------CTCCTCCCGCGTCGTTCGCCTCCCGCAGTTGCGCCCTT---CGCAGCCTCGCGC
TGAGCCACGGGAAGCCGCGCCCTTCACCGCCGCCTCGCGCCGCCGGAGCCACCGGAAGCCGCCGCGGGTCGTTGGGAGCC
TCCCTAGCCGCGGGAGCCCGCCCCCGCCGCGGGTCGCCGCCTCCCCAGCCGCCGGAACCGCCCCGC-CGCGGTTCGCCGC
CTCCGGAGCCGCAGCTTGGGCGCCGCCC----------------------CTCCACC----------------------G
GAGTCCCAAGTAAGTTTCTATTGCTGAACTCATCTATACTGAGACCAAGCAAACCAATTTCGTAGCCGCGGGAGCCGCCG
TCGGGGAGCCACCCGTCGCGCCTTCCGCCGCGGGAGCCGCCGCGCACTTCGCCGCGGGGGAG------------CCGCC-
-----------CGCCGCGCCCTTCGCTGCCCGAGCCACTCAGCTTGGCCTCCGCCGCGGGGACAGCTTGCCCTCATGCCA
CCCAACACGGTCTGCAGTCGGTCACAACCATCCGATAACTCACGCCATACACTACAGGGTGGTCACTAACATGAATCTGA
GGCGCTGCCATTATGCACGGTT----------------------------------------------------------
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-----------------------------------------ATGGTGAGATTGAAACTACAGAATACTTATACTTC---T
A----TACCGCGTCTCA-TTTTCTTCTAGGCTTCATATTCATTGATTGATATGATTTTTT-ATGTTAGG----ATAAACG
GCGACGGTTTTCGATAATCTGGTCTAAGAGCTTCTGGAG----AAAAAAAAT-----CCTAATCAAGCAGTTTGGCAACA
ACAATGCTGAGATTAAGTTCAGCAAGGGAGCTGAACAACCTTTTACAGTGTCCACTCTCA-CAAA--------TACTCTG
GTTGGTAGTTGTTTGCCCTCTCCTG-ATCGCGATGAATTATGGATGTCAGCTGTTCCACTAATAGATTGGTT--------
----TGATTTTTCAGGCCTG------------------------------------------------------------
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----------------
>chr3A_679
GCCTCCCAGCAGCTGGAGC-------------------------------------------------------------
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---------------------------------------------------------CCGCCCCCGCCGCGGTTCGCCGC
CTCCGGAGCCGCAGCTTGGCCGCCGCCACTCCGCCTCCACCACGCCGCCACTCCGCC----------------------G
GAGTCGCCAGTAAGTTTCTATTACTGAACTCATCTATACTGAGACCAAGCAAACCAATTTTGTAGCCGT-----------
---GGGAGCCACCCGTCGCGCCTCCCGCCGCGGGAGCCGCCGTGCCCTTCGCCGCGAGGGAGCCGCCGCGTGAACCGCC-
-----------CGCCGCGCCCTTCGCTGCCCGAGCCGCTCAGCTTGGCCTCCGCCGCAGGGACAGCTTGCCCTCATGCCA
CCCAACACGGTCTGCAGTCCGTCACAAC---CCGATAACTCACGCCATACACTACAGGGTGGTCACCAACATGAATCTGA
GGCGCTGCCATTATGCACGGTT----------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------ATGGTGAGATTGAAACTGCAGAATACTTATACTTC---T
AGCTATACCGTGTCTCA-TTTTCTTCTAAGCTTCATATTCATTGATTGATATGATTTTTT-ATGTTAAG----ATAAACG
GCGACTGTTTTGGATAATCTGGTCTAAGAGCTTCTTGAG----AAAAAAAAT-----CATAATCACGCAGTTTGGCAACA
ACAATGCTGAGATTAAGTTCAGCAAGGGAGCTGAACAACCTTTTACAGTGTCCACTCTCA-CAAA--------TACTCTG
GTTGGTAGTTGTTTGCCCACTCCTG-ATCGAGATGAATTATGGATGTCTGTTGTTCCACTGATAGATTGGTT--------
----TGATTTTTCAGGCCTGGTAAACAACAAGGTAGCCAGCTGCTAATAAAGACAAGCCCATGAGGAGAAATGGATA---
---TAATGTTAACTCATGTTCAACTGTTTTGCCTTTTCCCCTGAAGCTTTGCAACTGCGAG-GCTCCAGTTTCTGTTGAT
CTTAATGTAAGACCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GGAGATGAAGTGATGGAGATG-----------------------------
----------------------AATTTAGCATTTTAACAAATCAAGCGGTCAAGCCACCAAATCATGATCCTGTAATGTT
GCAGTA-CAACTTCGAAAGGATGAGATACTTTTGGTTGCATGCTTAACGACAACTATTTGGTA------CCACTCAAACT
GGACACCGAAGCAATTTTGAACTCATGTCAAACATGTTTGTTGTTTCCTGCAATTTTTTCCTTTTATTTCTGCACGAACT
CCTCAGTATGTACTTCCTGTTGCTATATAGTTTTTCCATATGCAATCTGTGGACCATCACACTCTGAAGTACAGTCGATG
GCTCTATATTTTTTAACTTGTCAGCTACCTTTAAAGCAAATGTGACGATGAAAACTTAGCATCAATGCACTTTTCTATAT
ATTATGTTCTGACTACCCTACTCAATTGCTAAGCCAGCGAGGATAAAAGCTTGCCTTGCCTTTTGCCTTTTTGTGTGTGC
TGGTAAGAACCCGGTTGTTATCCTCTTCTCATGGCCTTGTTAAGTACAGTCTTTGTTTAAAAAGCCACATATATATTATG
ATTCATAATAGCATTGCAGCCTTGTAGGCAAAGGTTTGGAACACGCGGCGATCAAAATTTATACAATAGCTTTCAGTATA
GTATTCTGAGGAATACTAAATGGTCCAACGTGGTGACCTCAGATTCGTTTGTTGTTTCATATGC---TGTAGTTTTTTGC
TTCACATGGAAAA-GGGGCTAAGTTTGGTGGGCTTTGTATATTTCTCATCACTTTGTGTTGAATTTTTTGCAGTCCTTAT
TTGCCAGCGTTAAGGTCAATCGTAGTGCTAGCGCTTAGTGCTCTCTGTTCAATTCTGGGGTGGCACGTGGCAGACCAAGC
ATTGACAGAGCTTGTCATTTTATGAATCTCAGGTAATATGATTCTTCTATGTAGCGATGCATCGGCTTTTAGTAATCTTC
AAAGTGAATGATAATTTATTGTTTTATTTCCAAGAATGGGAATTTTAGTTGCAAATGATTTTTACTAAATATTTAAACTT
GTTCGCAAGTACATGTTTATCTTAGTTTACAAGTAAACAAGCAAAACTGTTTTTTTAGAAATAAACCTTTTCCTCTTATT
TTTGACACGATCTCTGTTGATGCAGGCTGTCATTTTACTAATTTGAAAAGGTTGGCCACTGAGAACTTCATTTATGCACA
CAGACCATCCATGGATTAGATAGGATGTACGATGCAGTGGCTACATCGACCGCCCCGAGCTTGCCGATGACTCCGGCCGG
GCAGATGATGCCTTTGTGCGACATTGCACCGATGTCGTACACACACTCCAAAACTGACATAATAATTTGACCATGTGTGC
ATTTTCAATCTCTAAATCTCTGATTGTTGATGATGTGCAGGATGGTTGAAAGAACAAAAATGCCTGATTGTTTAGTACTG
CTCAAATTTGGGCAAATAGTGTAGACCTGCACACCCTTTGAATGGCACAGAGAAAACATATAGAAGTT-TATGGTCGTAT
ATCGAGTTATAT-TACTGTGAGCAATTGAAGATTTGACCATTTCTATCAGTTATGGGTTAGTGAGGACGAATTGGGGCAT
AAATCCAGATGATTTT
>chr2A_1104
--------------------------------------------------------------------------------
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-----------------CGGTT----------------------------------------------------------
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-----------------------------------------ATGGTGAGATAGAAACTCCAGAATACTTACACTTATTAT
A----TACCGTGTTTCCTTTTTCTTCGAGGCTTCAAATTCATCGGTTGATATGATTTTTTTAGGTTAGG----ATAAATG
GCGATGATTTCGGATAATCTGGTCTAAGAGCTTGTTGACACGAAAAAATAAT-----CCTAATCAAGCAGTTTGGGAACA
GCAATGCCAAGATTAAGTTCAGCTAGGAAGCCGAACGCCATTTTACAGTGTCTACTCTAG--AAGTACTCTGCTAATCTG
CTTGGTAGTTGTTTGCCCTCTCTTG-ATCGAGATGAATTATGGATGTCTCTTCTGCCACTGATAGATTGGTTTGGTGGTT
GGTCTGATTTTTCAGGCCTGGTAAACAAGAAGGTTGCTAGCTGCTTATAAAGACAAGCCCGTGAGGAGAACTGGATATAT
ATGTAATGTTAACTCATGTTCAATTGTTTTGCCATTTTCCTTGAAACTATGCAACTGCGACTGCTCCAGTCTTTGTTGAT
CTTAATGTAAGACCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------GGAGATGAAGTGTATTGCTTATCAAATTCTGTTGTTTTCTTGTCAGATGA
AAGAATTTAATTTTAGGATGAAAATTTAGCA-TTTAACAAATCAAGCGGTCAAGCCACTAAATCATGATCCTTTAATGTT
ATAGTAACAGCTATGAAAAGATGAGATACTTTTGGTTGCATGCTTAAAGAGAACTACTTGGTA------CCACTCAAACT
GGACACCAAAGCAATTTTGA------------------------------------------------------------
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----------------
>chr6B_1104
--------------------------------------------------------------------------------
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-----------------CGGTT----------------------------------------------------------
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-----------------------------------------ATGGTGAGATGGAAACTCCAGAATACTTGCACTTATTAT
A----TACTGTGTTTCCTTGTTCTTCCAGGCTTCAAATTCATTGGTTGATATGGTTTTTTTAGGTTAGG----ATAAATG
GCAATGATTTCGGATAATCTGGTCTAAGAGCTTGTGGAG----ACAAAAAAATAATCC-TAATCAAGTAGTTTGGGAACA
ACAATGCCAAGATTAAGTTCAGCAACGAAGCCGGACGACATTTTACAGTGTCTACTCACA-CAAGTACTCTGCTAATCTG
CTTGGTAGTTGTTTGCCCTCTCCTGAATCGAGATGAATTATGGATGTCTCTTGTGCCACTGATAGATTGGTTTGGTGGTT
GGTCTGATTTTTCAGGCCTGGTAAAC-AGAAGGTTGCTAGCTGCTTATAAAGACAAGCCTGTGAGGAGAACTGGATATAT
ATGTAATGTTAACTCATGTTCAACTGTTTTGCCATTTCCCCTGAAACTATGCAACCGCGACTGCTCCAGTCTTTGTTGAT
CTTAATGTAAGACCATGAGATGAAGTTTGCTTATCAAATTCTGTTGTTTTCTTGTCAGATGAAAGAATATAATTTTAGGA
TGAAAATTTAGCATTTAACAAATCAAGTGGTCAAACCACTAAATCAAGTCGAACGACATTTTACAGTGTCTACTCTCACA
AGTACTCTGCTAATCTGCTTGGTAGTTGTTTGCCCTCTCCTGATCGAGATGAATTATGGATGTCTCTTGTGCCACTGATA
GATTGGTTTGGTGGCTGGTCCGATTTTTCAGGTCTGGTAAACAGAAGGTTGCTAGCTGCTTATAAAGACAAGCCCGTGAG
GAGAACTGGATATATATGTAATGTTAACTCATGTTCAACTGTTTTGCCATTTCCCCTGAAACTATGCAACTGCCACTGCT
CCAGTCTTTGTTGATCTTTATGTAAGACAAGGAGATGAAGTGTACTGCTTATCAAATTCTGTTGTTTTCTTGTCAGATGA
AAGAATTTAATTTTAGGATGAAAATTTAGCA-TTTAACAAATCAAGCGGTCAAACCACTAAATCATGATCCTTTAATGTT
ATAGTA-CAGCTATGAAAGGATGAGATACTTTTGGTTGCATGTTTAAAGAGAACTACTTGGTA------CCACTCAATCT
GGACACCGAAGCAATTTT--------------------------------------------------------------
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----------------
>chr2B_1104
TAGTTGTTTGCCCTCTCCTGATCGAGATGAATCATGGATGTCTCTTGTGCCACTAATAGATTGGTTTGGTGGTTGGTCTG
ATTTTTCAGGCCTGGTAAACAAGAAGGTTGCTAGCTGCTTATAAAGACAAGCCCGTCAGGAGAACTAGATATATATATGT
AATGTTAACTCATGTTCAACTGTTTTGCCATTTCCCCTGAAACTATGCAACTGCGACTGCTCCAGTCTTTGTTGATCTTA
ATGTAAGCAGGGGCGGAGCTAAGGGGGGACGAGCGGGGGCCACGCCTCCCCCCCCCCAACCGCTGCGTCGTACCTAAGTT
GCGTAGGCTACGTCAGGTAGATTAGGTGCTACGTCAGACAGATTTAGGATTAATTGGCCCCCCCTAAGTGTGCGCTTAAG
GCTTGAAGCCCAGGAACTTTGCATGTTAAAGCCCATGTACTAGCTAGTCAGCCCACACTACACGAAACAAACAAACTACC
AGGTAGTTTCGGAAGCTGACGAGGCCACCAGGGCATCCTCTATCGATTGTTTCGGCTCAGACGCAATACGCGTGGCTGCA
AGTTCAACTAGGGCATCCGCACAACCGATCAGCGCCGGCAGCGACGACAGCATACTCCTGCGGTGAGTTCCTTGATTCCT
TGATTGATTTATATACTGTGCAACAATACTAATGAATTGATCCGCATCTGGCTCGAGAAGGCCAGAAACTTCTTGTTCAG
ATGAAGTTAATTAAGGGCGTCAATTTCTTGTTTTCTTCTAAAAAATGGTACACTAAATTAGGCATTCGCTCATTATGATT
CTATCATCTAAGTTTCAAATTTCACTGGCTCACGCCAGATATAAGAGCTAGGTGTATCATCGGCTAGAGGCTCATGTCTA
GCCTATTGCAGCTTTTTATTATTAACAAACTGCTAGATGCTAGTTTCTGTTTTTCAGGCCGATTAGTTGATGTACAAACT
ACCGATCAAATATTCAGGCTCAAGTAAAATTTACACAACCAGCTAGAATCGAAAGCGCACCCTATAAGATTGTCGACTTT
GTTCTATGGGTTTTACCCATAAGAGCCACATTAAACTAATGAAAAAACTACATTTTTATAGTTGCAACATACAAATTAAT
CATGTGTTTCTCTTTGTATGGTCATTAATTATATGAAAAAAAATGTTCATTGTCTTCTTCGCCCAACTATGGTCAAATCC
TGGCTCCGCCCCTGAATGTAAGACCAGGAGATGAAGTGTATTGCTTATCAAATTTTGTTGTTTTCTTATCAGATGAAAGA
ATTTAATTTTAGGATGAAAATTTAGCATTTAACGAATCAAGCGGTCAAGCCACTAAATCATGATCCTTTAATGTTATAGT
ACAACTATGAAAGGGATGAGATACTTTTGGTTGCATGCTTAAAGAGAACTACTTGGTAGTGGTACCACTCAAACTAGACA
CCGAAGCAATTTTGATTGGATAATAATTTATGCACCACAACATAAGTGGATAAACTCCTCTCACATGTTTGCTATTTCCT
GCAAACTTTTCCTTTATGTAGGAACTTCTCAGTATATACTTCCTTTCCGTTTGCAACCTGTGGACCATCACTCTGTGTAG
TACAGTCAATGGCTCTATATTTTTGAACTTTTAAACTACCCTAGAGGCGATGATGAAAACTTAACATCAGTGCACTTTTC
TATATATTGTATTCTGACTACCCTACTCAATCGCTAACCCAGCGAGGTTAAAAGCTTGCCTTGCCTTTTGCCTTTTTTTT
CTTGTGCTGGTAAGAACAAATGTCGGCTGTTATCCTCTTGTCATGTCCCTGTTAACTATAGTTATCTCTTTGTAAAAAAT
CACATATATACTATGTTTTATAATAGCATTGTAGGCAAAGGTTTGGATCATGCAGTGATCAATATTTAGACAACAATTTC
CAGTACAATATTCTAAGGAATACTAGATGGTCTAAGGTGGTAACCTCAGATTCGTGTGTTGTTTCATATGCTGTAGTTTT
CTGCTTCACATGAAATTTTCACATGGAAAATGGGCTAAGCTTGGTGGGCTTTGTATTTCACCTGCTGTTTTAAAGCAGAA
TCGAACGTCGTGATGGTTCCACCTGCTGTTTCCCATGTACGATCGGCACTCTCCCTTCCACGCGCCGGTAAGGGCATGTA
CAATGGTGCTATCTTAGGAGTGCCACATAGGGTAAATGATGAGGTGGAGGAGAGACAACTCACAAGAAAAGGCTTGTCTT
CTCTTATTTAAGAGAAGACAAGAGATGACCTCTTAGTACAATTTGTCTCACCATGTTTTAAGGAATGACTAGTTATTGAA
GATAAGGCTAAGATATAACTCATTGTAGACATACTTTTTTGTTATCTCTAAATAACATGCAAGACTTAAGATAAGACTGT
CTTATCAACCATTGTACATGCCCTAAGAAAAGCAGCCCACCCCGTGTGGATCGGTACAACGTGGCCCCATCCACGACCAA
ACACACACACAGAGAGAAAACTGTCGCTACACACGCACACACACGTCTCCGTTTCTCCTCTCTCTCCCCAACTCGCTCCC
GATCCCATCTCTCTCCATGAAAAGTTGCCGCCGCCGGCGGCTGTGCTCGTCGCCCCGCCTCCTCTCCATCCGTTGCCGCG
CGCGGATCTAGGTGAGGCATATCTCCCGTCCCTTGCGCCCGCCGTGAAAGAGAGGGAGAGAGAAAGAGAGAGGTGGGAGA
GAGAGGGAGGAGCAGACAATGGCGGCGCTGGCCTAATTGCCGACAGTGGAAGATGAGGTCATGGTTCTGACGCGTCGTGG
GTCCGCGCTGCTGAGGCACGGCCATCGACTTACTTATTTGCTTCTGGCCGCAGGCGCACCTTCTCCTCATGTCACCCAAG
ACGGTTTGCGGTCCATCACGGTCATCATAACTCTGAACGCCGCCGTCGTCGTCCGACATACAGTTCAGGGCGGTCACCAG
AAAGAGCCTGATATGTCGCCGTTATGCAGAAGCTCTCGGTTATGCTGAGATAGAAACTCCAGAATACTTACACTTATTAT
A----TACTGTGTTTCCTTTTTCTTCCAGGCTTCAAATTCATTGGTTGATATGATATTTTTAGGTTAGGTAGGATAAATG
GCGATGATTTCGGATAATCTGGTCTAAGAGCTTGTGGAG----ACGAAAAAATAATCCCTAATCAAGCAGTTTGGGAACA
ACAATGCCGATATTAAGTTCAGCAAGGAAGCCGAACGGCATTTTACAGCGTCTACTCTCATCAAGTACTCTGCTAATCTG
CTTGGTTGTTGTTTGCCCACTCCTG-ATCGAGATGAATCATGGATGTCTCTTGTGCCACTGATAGATTGGTTTGGTGGTT
GGTCTGATTTTCCAGGCCTGGTAAACAAGAAGGTTGCTAGCTACTTATAAAGACAAGCCCGTGAGGAGAACTGAATATAT
ATGCAATGTTAACTGATGTTCAACTGTTTTGCCATTTCCCCTGAAACTATGCAACTGCGACTGCTCTAGTCTTTGTTGAT
CTTAATGTAAGACCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GGAGATGAAGTGTATTGCTTATCAAATTCTGTTGTTTTCTTGTCAGATAA
AAGAATTTAATTTTAGGATGAAAATTTAGCA-TTTAACGAATCAAGCGGTCAAGCCACTAAATCATGATCCTTTAATGTT
ATAGTA-CAACTATGAAAGGATGAGATACTTTTGGTTGCATGCTTAAAGAGAACTACTTGGTAGTGGTACCACTCAAACT
AGACACCGAAGCAATTTTGA------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>chr1A_1144
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
A----TACCGTGTTTCCTTTTTCTTCCAGACTTCAAATTCATTGGTTGATATGATTTTTTTAGGTTAGG----GTAAATG
GCGATGATTTCGGATAATCTGGTCTAAGAGCTTGTGGAG----ACGAAAAAATAATCC-TAATCAAGCAGTTTGGGAACA
ACAATGCCAAGATTAAGTTCAGCAAGGAAGCCAAACGACATTTTACAGTGTCTACTCTCA-CAAGTACTCTGCTAATTTG
CTTGGTAGTTGTTTGCCCTCTCCTG-ATCGAGATGAATTATGGATGTCTCTTGTGCCACTGATAGATTGGTTTGGTGGTT
GGTCTGATTTTTCACGCCTGGTAAACAAGAAGGTTGCT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGCTGCTTATAAAGATAAGCCCGTGAG
GAGAACTGGATATATATGTAATGTTAACTCATGTTCAACTGTTTTGCCATTTCCCCTGAAACTATGCAACTGCGACTGCT
CCAGTCTTTGTTGATCTTAATGTAAGACCAAGAGATGAAGTGTATTGCTTATCAAATTCTGTTGTTTTCTTGTCAGATGA
AAGAATTTAATTTTAGGATGAAAATTTAGCA-TTTAACAAATCAAGCGGTCAAGCCACTAAATCATGATCCTTTAATGTT
ATAGTA-CAGCTATGAAAGGATGAGATACTTTTGGTTGCATGCTTAAAGAGAACTACTTGGTA------CCACAAAAACT
GGGCACCGAAGTAATTTTGA------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>chr3B_1441
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-----------------CTGGTAAACTACAAGGTAGCC------------------------------------------
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-----------------------------------------------------AGCTGCTAATAAAGACAAGCCCATGAG
GAGAACTGGATA------TAATGTTAACTCATGTTCAACTGTTTTGCCTTTTCCCATGAAGCTTTGCAACTGCGAGGGTC
CGA-TCTCTGTTAATATTAATGTAATACCAGGAGATGAAGTGATGGAGATG-----------------------------
----------------------AATTTAGCATTTTAACAAATCAAGCGGTCAAGCCACCAAATCATGATCCTGTAATGTT
ACAGTA-CAACTTCGAAAGGATGAGATACTTTTGGTTGCATGCTTAACGACAACTATTTGGTA------CCACTAAAACT
GGACACCGAAGCAATTTTGAACTCATGACAAACATGTTTGCTATTTCCTGCAATTTTTTCCTTTTATTTCTGCACGAACT
CCTCACTATGTACTTCCTGGTGCTATATAGTTTTTCCATATGCAATCTGTGGACCATCACACTCTGAAGTACATTCGATG
GCTCTATATTTTTTAACTTGTCAGCTACCTTTAAAGATAATGTGATGATGAAAACTTAGCATCAGTGCACTTTTCTATAT
ATTATGTTCTGACTACCCTACTCAATTGCTAAGC-AGCAAGGATAAAAGCTTGCCTTGCCTTTTGCCTTTTTGTGTGTGC
TGGTAAGAACCCGGTTGTTATCCTCTTCTCATGGCCCTGTTAAGTGCAGTCTTTGTTTAAAAAACCACATATATATTATG
ATTCATAATAGCATTGCAGCCTTGTAGGCAAAGGTTTGGAATACGCGGCGATCAAAATTTATACAACAGCTTTCAGTATA
GTATTCTGAGGAATACTAAATGGTCTAACGTGGTAACCTCAGATTCATTTGTTGTTTCATACTATGTTGTAGTTTTTTGC
TTCACATGGAAAAAGGGGCTAAGTTTGGTGGGCTTTGTATATTTCTCATCACTTTGTGTTGAATTTTTTCCAGTCCTTAT
TTGCCAGCGTTAAGGTCAATCGTAGTGCTAGCGCTTAGTGCTCTCTGTTCAATTCTGGGGTGCCACGTGGCAGACCAAAG
ATTGACAGAGCTTGTCATTTTATGAATTTCAGGTAATATGATTCTTCTATGTAGCGATGCATCGGCTTTTAGTAATCTTC
GAAGTGAATGATAATTTATTGTTTTATTTCCAAGAATGGGAATTTTAGTTGCAAATGATTTTGACTAAAAATTTGAACTT
GTTCGCAAGTACATGTTTGTCTTAGTTTACAAGTAAACAAGCAAAACT-TTTTTTTAGAAATAAACCTTTTCCTCTTATT
TTTGACACAATCTCTGTTGATGCAGGCTGTCATTTTAGTAATTTGAAAAGGTTGGCCGCTGAGAACTTCATTTATGCACA
CAGACCATCCATGGATTAGATAGGATGTACGATGTAGTGGCTACATCGACCGCCCCGAGCTCGCCGATGACTCCGGCCGG
GAAGATGATGCCTTTGTGCGACATTGCATCAATGTCGTACACACACTCCAAAACTGACAAAATAATTTGACCATGTGTGA
ATTTTCAATCTCTAAATCTCTGATTGCTGATGATGTGCAGGATGGTTGAAAGAACAAAAATGCCTTACCGTTTAGTACTG
CTTAAATTTGGGTAAACAATGTAGACCTGCACACCCTTTGAATGTCTCAGAGAAAACATATAGAAGTTCTATGGTCGTAT
ATCGAGTTATAT-TACTAC-------------------------------------------------------------
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>chr3B_2115
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-----------------------------------------------------------AATAAACCTTTTCCTCTTATT
TTTGACACGATATCTGTTGATGCAGGCTGTCATTTTACTAACTTGAAAAGGTTGGCTGATGAGAACTTCATTTATGCACA
CAGACCATCCATGGATTAGATAGGATGTACGATGCAGTGGCTGCATCGACCGCCCCGAGCTCGCCGATGACTCCGGCCGG
TCGGATGATGCCTTTGTGCAACATTGCATCGATGTTGTACACACACTCCAAAACTGACAAAATAATTTGACCATCTAAGA
ATTTTCAATCTCTAAATCTCTGATTGTTGATCATGTGCAGGATGGTTAAAACAAGAAAAATGCCTTACTGTTTAGTACTG
CTCAAATTTGGGTAAACAGTGTGGACCTGCACATCCTTTGAATGGCACAGAGAAAACATATAGAAGTT-TATAGTCGTAT
ATCGAGTTATAT-TAGTGTGAACAATTGAAGA-TTGACCATTCCTATCAGTTATGGGTTAGTGAAAACGAATTGGGGCAT
AAATCCGGATGATTTT
>SNPs
SS-S--SSS-SSSSS-SSSS-SSSSS-S-SS-SSSSSSSSSS-SSSSSSSSSSSS-SS-SSSS--SS-SS-SSSSSSSSS
-SSS-S--S-SSSS-S-SSSSS-SS-SSSS----SS-SSSSSSSS-S-SSSSSS-SSSSSS-SSSSSSSSS-SS-SS--S
SSSSS-SS-SSSSSSSSS-SSSSSSSSSS-SSSSS-SS-SSSSSSS-SSS-SSS-SSSSSS-SS-SSSSS-SS-SSSSSS
S--SSS-SS-S-SS-S-S-SS--S--S-SS-SSS--SSSSSSS---SSSSSSSS-SSS----------------S-----
-------S-------------------S--S----------S----------------S-S------S--------S-S-
---------S----------SSS-------S--S--------------SS-------S---S------------------
---S-S--SSSSSSSS----SSSSSS------S---------------------S-S-------SSS-------------
S-------------S--S----------------------S-S---------S------------------SS-------
----S--------S-----S--------------S--------------------------------S-------S----
-----S----S-----------------------------------------------SSSS---S-SSS--S-SS-S--
--------------S---------------------S---------------------------------------S---
S----S--------------------------------S---------------S------------------------S
SS---S-SSSS-------------------S--------------------S------------S---------------
-----------------------------------------------------------------------S--------
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-------------------------------------------------------------S------------------
--------------------------------SS-----------S---------------------------------S
------------------------------------------------------------------S-----------S-
-------------------------------------------------S---------------------------S--
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-----------------------------------------------------------------------------S--
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----------------------------------------------------------S---------------S-----
------------------------------------------------------S---------S---------------
-------------------------------------S--------------------S---------------------
--------S----SS-------S--------------------------S--------------S-------S-S---S-
--S----------------S-----S--------------------S---------------------------------
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-----------------------------------------------------------------------------S--
S---------------------------------------------------------------SS------SS------
-----------------------------S-S------------------------------------------------
-------------------------------------S------------------------------------------
-------------------------------------------------S------------------------------
--------SSS-S---------------S---------------------------------------S---------S-
-----S----------
>forward_54
----------------------------------AACCGAAGTAGGAGAGGGGG--------------------------
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>reverse_3278
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-----------------------------------------------------------------------------ATG
GTTGGTAGTTGTTTGCCC--------------------------------------------------------------
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>forward_503
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---CCTTTCTCCCGCATGACCTC---------------------------------------------------------
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>reverse_5265
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----------------------------------------------------------------TAATGACTTTGGCCGG
GCAG----------------------------------------------------------------------------
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----------------
