>input_sequence_73529
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-----------------------------------------------------------ATGAGCGGCG---AGCCGGCA
GAGGCGACTCCGGCAGT---GGTGGTGGTGGGTTCACGGTTCTGTGCGCCGGCCGCCACGGCGTTCGCGGTCACCAAGAC
GATCAGCGTGACGGGGCGCGACTTCACCGTCACGGACGCCCACGGCGCGGCCGTGATGCAGGTGGAGGCGGCCGTGTTCA
GCTTCCTCCAGCACCGCTCCCTCCTCCTC--------GACGCGGCGTCGCGCCGCCCCGC-GCTCACCCTGCAGGACTCC
ACCTACCTAGCGAGCACGAGGTGGGAGGCGTACAGGGGGGACAGCACCAGCCGGAGGAACCTGCTCTTCGTCGCGGTGAA
GACCGCGCCCGTGCAGCTCGCCAGGACCAAGGTGCGCGTGTTCCTCGCCGGCAACGGCTCCGGCGAGCGGGTCCCGGACT
TCGTCATCGGC--------GGCAGCTACTACGCCGGCGCGTGCACGGTCTCTGCTGGAGGTGGCGGCGGCGGCGACGACT
CCGATGGCACCATCGTCGCGCGGATCAGCCGCCAGAACACGGCCGGCGGCGCGTTCCTCGGGAGGCACACGTATACCGCG
AGGATCAACCCCGGCGTCGACCAGGCGTTCATCCTCGCGCTCACCGTGATTCTTGACCAGATACATCACTAG--------
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>chr5B_1_TraesCS5B01G483900
GGTCTGCCCTTCCAC--CCCACCTCCTTGCTTCTCGCGTG-A-AAACCTAATTCCGGTGGGCGGCAGCGGCG---TCCTT
GGCGCCGCAACCTTCTTGAAGGCGTCGCCTTGAGGGAAGTGTGGTGGCGGGCTCTGTATGGGGTCGGTGACAGCAGCCGA
TATCGTG-TCCTTTTTCATCCAAGCCTTCGCTTTTCCTCCAACGCGTTCTGGGCTTGGGTTGTGTAGCTTGCTCTGCTTT
GGACGAGCCTCGTCGGCACAACATTTGGATGC-CCTGATCCACCCTTGGGGTTTTTCGGCGGCGTCCATCCATGTTCT--
AGGGAACTTTTTGTTCTTCGACGATCCAGCGCCTTGCGATCTAGGCGAGGAGGTTGTGGCCTCCTTCGAAGAC--GGAGT
TGGATGGATGCGTCGTGCCGAGGCCCTTAGTGACCGGTGACGGCATTGCCA-----------------TGTAGGTGCATC
TTCACTCCCGCTCTAGAGCCGGCATTGCTTCCGCCCAGGTA-----------GAGGACCTCAACTTCTTCGGCTATGTGC
TCCA-TGTATATC-CTTCCCGCGTGAAGTGTTTGAGGCTCAGTAAGCTGTTTTCCAGCGCCTCTGTATCTTGCTGCTCTT
GCTGCTTTC-------TGTAGTTCTTACTCTTTGTTGTACTCTGCAATTGTATCCTGGCCGGTCGATGGCTTTGTTAATT
TAAAGTTGGACTA--GGCTAGCGGCCTTCTCAGGCTCGGCTGCGTCTTTTCTCTAAGAAAATGTTGAGCTGTTTTCGCTA
GGTAGGTTCAAAATCATTGTACAGGCTAGAACTGTTCGCCCATAG----GGCCAAATGATATTGACAGCAACCGAAATCA
ACTTGTACGTTCAAAGTTGGCGGGTGCAGCCGTGGCTTTCAGCGTCGCGCTGGTCAAACCGGCCCGA----GACCATAGT
ACTCCGTTATATT-------------------------------------------------------------------
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---------------------------------------TGCCCGTCTCAACCATTCGCCATCCTTACCGTTTAAGCCTC
GACCACTC-------------GTCCATAGCCCAAGCAATCATCCTCCACGCGCGCGGTCATGAGCGGCG---AGCCGGCA
GAGGCGACTCCGGCAGT---GGTGGTGGTGGGTTCACGGTTCTGTGCGCCGGCCGCCACGGCGTTCGCGGTCACCAAGAC
GATCAGCGTGACGGGGCGCGACTTCACCGTCACGGACGCCCACGGCGCGGCCGTGATGCAGGTGGAGGCGGCCGTGTTCA
GCTTCCTCCAGCACCGCTCCCTCCTCCTC--------GACGCGGCGTCGCGCCGCCCCGC-GCTCACCCTGCAGGACTCC
ACCTACCTAGCGAGCACGAGGTGGGAGGCGTACAGGGGGGACAGCACCAGCCGGAGGAACCTGCTCTTCGTCGCGGTGAA
GACCGCGCCCGTGCAGCTCGCCAGGACCAAGGTGCGCGTGTTCCTCGCCGGCAACGGCTCCGGCGAGCGGGTCCCGGACT
TCGTCATCGGC--------GGCAGCTACTACGCCGGCGCGTGCACGGTCTCTGCTGGAGGTGGCGGCGGCGGCGACGACT
CCGATGGCACCATCGTCGCGCGGATCAGCCGCCAGAACACGGCCGGCGGCGCGTTCCTCGGGAGGCACACGTATACCGCG
AGGATCAACCCCGGCGTCGACCAGGCGTTCATCCTCGCGCTCACCGTGATTCTTGACCAGATACATCACTAGCATTGGAA
CC-------GATCAATCGCCGCAATTTCGTTTGTAAATCACTTGT-GAAATACCATCATTTTCGTTGTGAAAAAATCACT
AGCATTCGACCAGGTGTTCTTTTTTTTCACTTTCTTTTGTGAGGCAAGGATGTACTCTTGTTGTGG---AAAAACAAATT
CGGTCCTGTTTTTTAAGGGGCGAGTTGCATGTCCGCCGGTGACCGGATTCATCGCATCCAGAGCCGTTGGATCCCACGCG
TGACAGTTGGTAGTGTGACCCGCCAGCTTGCAAAATGAGCCATGTTGCATTTGCTGGCTTGTGGCAGTGCATTGACCGGA
CCCGTTTACAACATGAGTCATGTTGCACTATGATCCATGTTGTGCTCGGGAAATCCATCTTCCAACCCCGGTTTGCAATA
TAAGTCATGTTAAGCTCGCTGGTTGAAACACGATCCATGTTGCGGTTGGAGAAACATTTACCTATTGCGTCTCGGAGGCA
ATTGAGTTGTGGGCCATTTGGTCAAACTCAGCTCCAGCGACCGCAGAGAAGGCCGACGTGCATCGAGTTATCAACCGTCT
CTTTACAAATGTTTCCCGCTTTTAGTGGGCCCTATTTCCAGAGTCAAAGCTGGAATCTTAGGATTTTTTTTTGGTTGTTG
TGATTTTTAGATGAGACTGGCTCAATATCTCTTGAAATATTCACCCTAA--------AAAATCATAGTTTTTCCTAGCGA
TCCTAATGATCATATTTCCAAATAGAAGTTTTAAGCACAATAGACTGTCCATGGCAACATGTAAGCATGTAAGACTTGTC
AAATGGGAATTGGTGCCCGTGATGGTTCATCCGCACCTTCTCCTCTTTCCTACACGCCCGTACCATTTCCAATGCATCCT
TGTTTCTTAGGTTATTTGAATCATGCCATATCAAATGTACACTAAAAAATGTATTGCT-------TTTACATTCACCTCT
CCAAATCAGGAGATATAATGTCAGCAGAAGTGTTGGCTAAAGACTTAGGCTGAGACGG
>chr5D_1
GGTCTGCCCTTCCACTCCTCACCACCTAGCTTCTCGGGTG-A-AAACCTAACTCCGGTGGGCGGCGGCGGCG---TCTTT
GGCGCCGCGACCTTCTTGAAGGCATCGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCGGTGACTGCAGCCGA
TGGCATG-CCCTTTTTCGCCCAAGCCTCCGCTTTTCCTCCGACGCGTTATGGTCTTGGGAGGTGTAGCTTGCTCTGCTTT
GGATGAGCCTCGTCGACTCA---GATGGATGC-TCTGATCCGCTCTTGGGGTTTGCTGGCGGCGTCCATTCTTGTTCA--
GGGGAACTCTCCGCTCTTAGACGGTGCGGCGCCTTGCGATCCAGGCGAGGAGGTTGTGGCCTTCTTCGAAGAGCGGAGTT
TGGATGGATGCGTCGTGTCGAGGCCCTTAGTGTCTGGTGACAACA-TGCCA-----------------TTTAGGTGCATC
TTCACTCC-TCTCCAGAGCCGGCATTGCTTCCGCTCAGGTTTAGCCGTGCTGGAGGACCTCAACCTCTTCGGCTGTGTGC
TTCATTGTATATC-CTTCCTGCGTGAAGTGTTTGAGGCTCAGTAAGCTGCTTTCCAGCGCCTCTGTACCTTGCTGCT---
------TTC-------TGTTGTTCTTGTTCTTCGTTGTACTCTGCAGTTGTATCCTGGCCGGTTGATGGCTTTGTTGATT
CAAAGTCGGACTA--GGCTAGCGCCCTACTCGTGCTCGGCTGCGTCTTTTCTCTAA------------------------
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>chr1A_1
GGTCTGCCCTTCCACTCCTCACCACCTAGCTTCTCGGGTG-A-AAACCTAACTCCGGTGGGCGGCGACGGCG---TCTTT
GGCTCCGCGACCTTCTTGAAGGCGTCGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCAGTGACTGCAGCCGA
TGGCGTGCCCTTTTTTCGCCCAAGCCTCCGCTTTTTCTCCGACGCGTTCTGGGCTTGGGAGGTGTAGCTTGCTCTGCTTT
GGATGAGCCTCGTCAACTCA---GATGGATGC-TCTGATCCGCTCTTGTGGTTTGTCGGCGGCGTCCATTCTTGTTCA--
GGGGAACTCTCCGCTCTTAGATGATGCGGTGCTTTGCGATCCAGGCGAGGAGGTTGTGGCCTTCTTCGAAGAGCAGAGTT
TGGATGGATGCATCGTGTCAAGGCCCTTAGTGTCTGGTGACGGCA-TGCCA-----------------TTTAGGTGCATC
TTCATTCC-TCTCCAGAGCCGGCATTGCTTCCGCTCAGGTTTAGCCGTGCTGGAGGACCTCAACCTCTTCAACTGTGTGC
TTCATTGTATATC-CTTCCTGCGTGAAGTGTTTGAGGCTCAGTAAGCTGCTTTCCAGCGCCTCTGTATCTTGCTGCT---
------TTC-------TGTTGTTCTTGTTCTTTGTTGTACTCTGCAGTTGTATCCTGGCCGGTTGATGGCTTTGTTAATT
CAAACTCGGACTATAGGCTAGCGCCCTACTCGGGCTCGGCTGCGTCTTTTCTCTAAAAA---------------------
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>chr1B_1
GGTCTGCCCTTCCACTCCCCACCACCTAGCTTCTCGGGTG-A-AAACCTAACTCCGGTGGGCGGCGGCGGCG---TTTTT
GGCGCCGCGACCTTCTTGAAGGCGTCGGCTTGAGGGCTGGGTGGTGGTGGGCGCTATTTGGGGTCGGTGATAGCAGCCGA
TGGCGTG-CCCTTGTTCGCCCAAGCCTCCGCTTTTTCTCCGACGCGTTCTGGCCTTGGGAGGTGTAGCTTGCTCTACTTT
GGATGACCCTCGTCGGCTCA---GGTGGATGC-TCTGATCCTCTCTTGGAGTTTGCCGGT-GCGTCCATTCTTGTTCA--
GGGGAACTCTCTGCTCTTAGACGGTGCGACGCCTTGCGATCCAGGCGAGAAGGTTGGGGCCTTCTTCGAAGAGCGGAATT
TGGATGGATACGTTGTGTCGGGGCCCTTAGTGTCTGGTGACGGCA-TGCCA-----------------TTTTGATGCATC
TTCACTCC-TCTCCATAGCCGGCATTGCTTCCGTTCAGGTTTAGCCGTGCTGGAGGACCTCAACCTCTTCGGCTGTGTGA
TTCATTGTGTATC-CTTCCTGCGTGAAGTGTTTGAGGCTCAGTAAGCTGCTTTCCAGCTTCTCTGTATCTTGCTGCT---
------TTC-------TGTTGTTTTTGTTCTTTGATGTACTCTGCAGTTGTATCCTGGCCGGTTGATGGCTTTGTTAATT
CAAAGTCGGACTA--GCCTAGCGCCCTACTCGGGCTCGGCTGCGTCTTTTCTCT--------------------------
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>chr3B_1
GGTCTGCCCTTCCACTACCCACCCCCCTGCTCCTCGGGTGAA-AACCCTAACTCCGGTGGGCGGCGGCGGCGGCGTTCTC
GGCGCCGTGACCTTCTTGAAGGCGTCGCCTTGAGGGATGGGG--TGGTGGGCACTGTTGGGATCCGTTGATAGCAGCGGG
TGGCGTG-TTCTTCTTCGTCCAAGCTTTAGCTTTTCCTCCGCCGTGCTCTGCCCGTTGGTTTTGCAGCTTGCTCTGCTTT
GGTTGAGCCTCGTCGGCACA---TTTGGGTGC-TCTGACTCGCTCCTTGGGTCTGCCCGGCGGCTTTCATCCTGTTCA--
TGGGAACTTCTCGTTTTTCGACGATTCGGCGCCTTGCGATCCAGGCGAGGAGGTTGTGGCCTCCTTCGAAGAC--GGGGT
TGGATGGTCGT-TCGTGCTGAGGCCCTTAGGTTTTGGTGAAGGCA-GGTCA-----------------TGTAGGTGCAGC
TTCATTTCCTCTCCAAAGCCGGCATTGCTCCCAACCAAGTGTAGTCGTGGTGGAGGACCTCAAGTTCTTCAGCTAGGTGC
TTCATTGTATATC-TTTCCTGTGTGAAGTGCTTGAGGCTT-GTGAGCTGCTTTCCAGCGCCTCTGTATCTTGCTGCT---
------TTC-------T-TTGTTCTAGTTTGTTGTTGTACTCTGCAGTTGTACCCTGGCCGGTTGATGGCTTTGTTAATT
CAAAATCGGACTA--GGCTAGCGCCCTTCTCGGGCTCGGCTGCGTCTTTTCTCTAAAAAAA-------------------
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>chr4D_1
GGTCTGCCCTTCCACTACCCACCCCCCTGCTCCCCGGGTGAA-AACCCTAACTCCGGTGGGCGGCGGCGGCG---TTCTC
GGTGCCGTGACCTTCTTGAAGGCGCCGCCTTGAGGGATGGGT--TGGTGGGCACTGTTGGGGTGCATTGACAGCAGCCGT
TGGCGTG-TTCTTCTTCGTCCAAGCTTTAGCTTTTCCTCCGACGTGCTTTGCCCGTTGGTTTTGCAGCTTGCTCTGCTTT
GGCTGAGCCTTGTCGGCACA---TTTGGGTGC-TCTGATCCGCTCCTTGGGTCTGCTCGGCGGCTTTCATCCATGTTCAT
GGGG-ACTTTCCGTTGTTCGACGGTTCGGCGCCTTGCGATCCAGGCGAGGAGGTTGTGGCCTCCTTCGAAGAC--GGGGT
TGGATGGTCGTGTCGTGCCGAGGCCCTTAGGTTTTGGTGAAGGCA-GGCCA-----------------TGTAGGTGCAAC
TTCATTCCCTCTCCGAAGCCGGCATTGCTCCCAACCATGTCTAGTCACGGTGGAGGACCTCAAGTCCTTCAGCTAGGTGC
TCCATTGTATATCATTCCCTGTGTGAAATGCTTGAGGCTT-GTG-----------AGCGCCTCTGTATCTTGCTGCT---
------TTC-------T-TTGTTCTAGTTCGTTGTTGTACTCTGCAGTTGTACCATGGCCGGTTGATGGCTTTGTTAATT
CAAAGTCAGATTA--GGCTAGCGCCCTTCTCGGGCTCGGCTGTGTCTTTGCTCTAAAAGAAAAT----------------
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>chr2A_1
GGTCTGCCCTTCCACGACCCACCCCC-TGCTCCTCGGGTGAA-AACCCTAACTTCGGTGGGCGGCGGCGGCGGCGTTCTC
GGC--------------------ACCGCCTTGAGGGATGGGG--TGGTGGGCACTGTTGGGGTGCATTGACAGCAGCCGG
TGGCGTG-TTCTTCTTCGTCCAATCTTTTGCTTTTCCTCCGCCGTGCTCTGTCCGTTGGTTTTGCAGCTTGCTCTGCTTT
GGCTGAGCCTCGTCGGCACA---TTTGGGTGC-TCTGATCCGCTCCTTGGGTCTGCCCGGCGGCTTTCATCCATGTTCAT
GGGA-ACTTCCCATTGTTCAGCGGTTCGGCGCCTTACGATCCAGGCGAGGAGGTTGTGGCCTCCTTCGAAGAC--GGGGT
TGGATGGCTGTGTCGTGCCGAGGCCCTTAGGTTTTGGTGAAGGCA-GGTCA-----------------TGTAGGTGCATC
TTCATTCCCTCTCCAAAGCCGGCATTGCTCCCAACCATGTGTAGTCGTGGTGGAGGACCTCAAGTCCTTCAGCTAGGTGC
TCCATTGTATATC-CTTCCTGTGTGAAGTGCTTGAGGCTT-GTGAGCTGCTTTCCAGCGCCTCTGTATCTTGCTGCT---
------TTC-------T-TTGTTCTAGTTCGTTGTTGTACTCTGCAGTTGTACCCTGGCCGGTTGATGGCTTTGTTAATT
CAAAGTCGGACTA--GGCTAGCGCCCTTCTCGGGCTCGGCTGCGTCTTTTCTCTAAAAAAA-------------------
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>chr4B_1
GGTCTGCCCTTCCACTACCCACCCCC-TGCTCCTCGGGTGAA-AACCCTAACTCCGGTGGGCGGCGGCAGCGGCGTTCTC
GGCACCATGACCTTCTTGAAGGCGTCGCCTTGAGGGATGGGG--TGGTGGGCACTGTTGGGGTGCGTTGACAGCAGCCGG
TGGCGTG-TTCTTCTTCGTCCAAGCTTTAGCTTTTCCTCCGCCGTGCTCTGCCCGTTGGTTTTGTAGCTTGCTCTGCTTT
GGCTGAGCCTCGTCGGCACA---TTTGGGTGC-TCTGATCCGCTCCTTGGGTCTGCCCGGCGGCTTTCATCCATGTTCAT
GGGA-GCTTCCCATTTTTTGATGGTTCGGTGCCTTGCGATCCAGGCAAGGAGGTTGTGGCCTCCTTCAAAGAC--GGGGT
AGGATGGTCGTGTCGTGCCGAGGCCCATAGGTTTTGGTGAAGGCA-GGCCA-----------------TGTAAGTGCAGC
TTCATTTCCTCTCCAAAGCCGACATTGCTCCCAACCAAGTGTAGTCGTGGTGGAGGACCTCAAGTTCTTCAGCTAGGTGC
TCCATTGTATATC-CTTCCTGTGTGAAGTGCTTGAGGCTT-GTGAGCTGCTTT---------------------------
--------------------GTTCTAGTTTGTTGTTGT-CTCTGCAGTTGTATCCTGGCCGGTTGATGGCTTTGTTAATT
CAAAGTCGGACTA--GGCTAGCGCCCTTCTCAGGCTCGGCTGCGTCTTTTCTCTAAAAAAA-------------------
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>chr2D_1
GGTCTGCCCTTCCACTCCCCACCTCCCTACTTCTCAGGTG-AAAACCATAACCCAGGTGGGCGGCGTCGTCGTCGTTGAC
ATT---GTGACCTTCTTGAAGGCGCCGCCTTGAGAGCTGAGTGGTGGTGGGCACTATTTGGGTTTGTCGACAGCAGCCGA
TGGCGTG-CCCTTCTTCATCCGAGCCTTTGCTTTTCCTC-GACGTATTCTGGTCGTAGGCGGAGTAGCGCGCTCTACTCT
GGATGAGCATCTTTGACACA---TTTGGTTGT-GCTGATCCACTCTTTGGGACAGTCCGACGGCTTCCTTGCATGTTGAT
GGGAAACTTTCCGTTCTTCGACGGTGCAGCGCCTTGCGATCTAGGCGAGGAGGTTGTGGCCTCTTTCGAAGAC--GGACT
TGGATGGATGTGGCGTGCCGGGGTCCTTAGTATCTGATGGAGGCA-AGCCA-----------------T-----------
------CCCTCTCTAGAGCCGACATTGCTTCCATCTATGTTTAGTCATTGTGGAGGATGTTGACTTTTTTAGCTATGTGT
TCACTTGTATATC-CTTCCTCCATGAAGTGTTTGAGGCTCAGTATGCTGATTTTCAACGCCTCTGTATCTTGCCCCT---
------TTCCGTTATTT-TAGTTCTATGTTGTACTCCTATACTGTAGCTGTATCCTGGTCGGTTAATGGCTTTGTTAATT
CAAAGTCGGACTA--GACTAGCACCTTGCCCGGGCTCGCCTGAGTCTTTCCTCTAAGAAAAT------------------
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>chr1B_2
-GTCTGCCCTTCCACTACCCGCCCACCTGCTCCTCAGGTG-A-AAACCTAACTCCGGTGGGCGGCGGCGGCGGCGTTCTC
GGTGCCGTGACCTTCTTGAAGGCTCCGCCTTGAGGTATGGGTGGTGGC---CACTGTTAGGGTGTGTTGACAGCAGCCGT
TGGCGTG-TTCTTCTTCGTCCAAGCTTTAGCTTTACCTCTGCCGTGTTTTGCCCGTTGGTTGTGCGGCTTGCTCTGCTTT
GGCTGAGCCTCGTCGGCACA---TTTGGGTGC-TTTGATCTGCTCCTTGGGACTACCTGGCGGCTTTCATACATGTTCAT
GGGA-ACT-CCTGTTGTTCGACGGTTCGGCGCCTTGCGATTCAGGCAAGGAGGTTGTGGCCTCCTTCGAAGAC--GGGGT
TTGATGGTCGTGTCGTGCCGAGGCCCTTAGGTTTTGGTGAAGGCA-GGCCA-----------------TGTAGGTGCAGC
TTCATTCCCTCTCCAAAGCCGGCATTGCTCCCAACCATGTTTAGTCGCGGTGGAGGACCTCAAGTCTTTCAGCTAAGTGC
TCCATTGTATATC-CTTCTTGTGTGAAGTGCGTGAGGCTT-GTGAGTTGCTTTCCAGCGCCTCTATATCTTGCTGCT---
------TTC-------T-TTGTTCTAGTTTGTTGTCGTACTATGCAGTTGTACCCCGACCGGTTGATGGCTTTGTTACTT
CAAAGTCGGACTA--GGCTAGCGCCCTACTCGGGCTCGGCTGCGTCTTTTCTCTAA------------------------
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>chr5B_21
----------------------CTCCCTGCCTCTCGGGTG-A-AAACCCTACTCTGTTGGGCGGCCGCACCG---TCCTT
GATGCCATGACCTTC-TGAAGGCATCGCCTTGAGGGTTAAGTGGTGGTGGGCGCTGTTTGGGTCCTTG--CAGCTAGTGT
TGCCAGG-CTCTTCTTCGTACAAGATTT-GCTGTTTCTCCGGCGTGTTCTGGTTGTGGGCGGTGCCACATGCCTTGCGAT
GGAAGAGCCTCATCAGCACT---GTTGGTGCGTTCTGATCCGCTCCTAGGGACGGTCAGGCGGCTCCCATCCATGGTCAT
GGGG-ACTTTCTGTTCTTTGGTGGTGCGGCCCCTGGCGATCTAGGCGAGGAGGTTGTGGCCTCCTTCAAAGAC--GGAGT
TGGATGGGTGTGTCATGCTGAGGTTCTTAGTCTTCGGTGTCGGCG-TGTCTTGTCGGTGCATCTTCATT-----------
------CTCCCTACTATGCCGACTTCGCCTCCATCTTGGTTTAGTCGCGACGGAGGACCTCAACTTCTTCAGCTATGTGT
TCCATTGTAGA-C-CTTCCTGTGTGAAGTGTTTGAGGCTTTGTAAGCTACTTTACAGCGCCTTTCTATCTTGCCATT---
------TTC-------T---GTTCTTGCTCTCTGTTGTATGTTGCCGTTGTATCCTGGCTAGTTGATGGCTTTGTCAATT
CAAAGTTGGACTA--GGCTAGCGCCCTACTCGGGCTCAGCTGCGTCTTTTCTCTAAAAAAAT------------------
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>chr1B_56
-----------------------------------------------------------GGCGGCGGCGGCG---TTCTC
GGCGACGTGATCTTCTTGAAGGCGCCGCCTTGAGGGATGGGTGGTGG---GCACTGTTAGGGTGCGTTGACAAAAGTCGT
TGGCATG----TTCTTCGTCCAAGCTTTAGCTTTTCCTCCGCCATGTTCTGCCCGTTGGTTGTGCGGCTTGCTCTGCTTT
GGTTGAGCCTCGTCGACCCA---TTTGGGTGC-TTTG-----CTCCTTGGGACTACCTGGCGGC-TTCATCCATGTTCAT
GGGA-ACT-CCCGTCGTTCGATGGTTCGGCGCCTTGCGATCCAGGCAAGGAGGTTGTGGCCTCCTTCGAAGAC--GGGGT
TTGATGGTCGTGTCGTGCCGAGGCCCTTAGGTTTTGGTAAAGGCA-GGCCATGTAGGTGCAGCTTCATT-----------
------CCCTCTCCAAAGCCGGCATTGCTCCCAACCATGTTTAGTCGTGGTGGAGGACCTCGAGTCCTTCAGCTAAGTGC
TCCATTGTATATC-CTTCTTGTATGAAGTTCTTGAGGCTT-GTGAGTTGCTTTTCAGCGCCTCTGTATCTTGCTGCT---
------TTC-------T-TTGTTCTAGTTCGTTGTCGTACTCTGCAGTTGTACCCCAACCGGTTGATGCCTTTGTTAATT
TAAAGTTGGACTA--GGCTAGCGTCCTACTCGGGCTCGGCTGCATCTTTTCTCTAAAAAAA-------------------
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>chr5D_729
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------------------------------------------------------------ATGTTGAGCTGTTTTCGCTA
GCTAGTTTCAAAATCAGTGTGCAGGCTAGAATTGTTCGCCCATAGGGCCGGCCAAATGATATTGACAGCAACCGAAATCA
ACTTGTACGTTCAAAGTTGGCGGATGCAGCCGTGGCTTTCAGCGTCACGGTGGTCAAACCGGCCGGAGACCGACCATAGT
ACTCCGTTATATT-------------------------------------------------------------------
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---------------------------------------TGCCAGTCTCAACCATTCTCCATCCTTACCGTTTAAGCCTC
GACCACTCAGCACGTACAAACGTCCATAACCCAAGCAATCATCCTCCACGTGCGCGGTCATGAGCGGCG---AGCCGGCA
GAGGCGACTCCGGCAGT---GGTGGTGGTGGGTTCGCGGTTCTGCGCGCCGGCCGCCACGGCGTTCGCGGTGACCAAGAC
GATCAGCGTGACGGGGCGTGACTTCACCGTCACGGACGCCCACGGCGCGGCGGTGATGCAGGTGGAGGCGGCCGTCTTCA
GCTTCCTCCAGCACCGCTCCCTCCTCCTC--------GACGCGGCGTCGCGCCGCCCCGT-GCTCACCCTGCAGGACTCC
ACCTACCTCGCGAGCACGAGGTGGGAGGCGTACAGGGGGGACAGCACCAGCCGGAGGAATCTGCTCTTCGTCGCGGTGAA
GACCGCGCCCGTGCAGCTCGCCAGGACCAAGGTGCGCGTGTTCCTCGCCGGCAACGGCTCTGGCGAGCGGGTCCCGGACT
TCGTCATCGGC--------GT------------------GTGCATGGTCTCTGCTGGAGGCGGCGGCGGCG---ACGACT
CCGATGGCAACATCGTCGCGCGGATCAGCCGCCAGAACACGGCCGGCGGCGCGTTCCTCGGGAGGCACACGTATACCGCG
AGGATCAACCCCGGCGTCGACCAGGCGTTCATCCTCGCGCTCACCGTGATTCTCGACCAGATGCATCACTAGCACTGGAA
CTAGCCATTGATCAATCGCCGCAGCTTCGTTTGTAAAACATTTGTCGAGATAACATCATTTTCGTTGTGG-AAAATCACT
AGCACTCGACCAGGTGTTTTTTTTTC-----TTCATTTGCAAGCAAAGGACATATCCTTGGGTTGTGGAAAAAACAAATT
CGGTACAGCTTTTTAAG---------------------------------------------------------------
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>chr5A_789
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----------------------------------------CATAG----GGCCAATTGATATTGACAGGAACCAAAATCA
ACTTGTACGTTCAAAGTTGGCGGACGCAGTCGTGGTTGTCATCGTCACA---GTCAAACCGGCCTGA----GACCATAAT
ACTCCGTTATACTCCCTCCGTTTTAATTTACTTCACATATTAGAGTTGACTGAAGTCAAATTTCTTAAAATTTGACCAAG
TTTATAGAAGAAAATATAAATATTTACCATAACAAATTTATACTATGTGGAAGTACATTTGATAATGAATCTAATGGTGT
TGATTTCTTATTGTATGTGTTAATATTTTTGTCTACAAACTTTGTCAAAGTTTATAAAGTTTGACTTTGACCAAAACTAA
TATGCGGAGTAAATAAAAACGGAGGGAGTATGACATGCATGCCCGTCTCAACCATCCTCCATCCTAAGCGATCAAGCCTC
GACCACTCAGCACGTAGACACGTACATAACCCAAGCAATCATCCTCCACGCGCGCGGTCATGAGCGGCGGCGAGCTGGTA
GAGACGACACCGGAGGCGGCGGTGGTGGTGGGTTCGCGGTTCTGCGCGCCGGCCGCCACCGCGTTCGCGGTGACCAAGAC
GATCAGCGTGACGGGGCGCGACTTCACCGTCACGGACGCCCGCGGCGCGGCCGTGATGCAGGTGGAGGAGGCCGTGTTCA
GCTTCCTCCAGCACCGCTCCCTCCTCCTCCGCTCCTCGACGCGGCGTCGCGCCGCCCCGTTGCTCACCCTGCAGGACTCC
ACCTACTTAGCGAGCACGAGGTGGGAGGCGTACAGGGGGGACAGCACCAGCCGGAGGAACCTGCTCTTCGTCGCGGTGAA
GACGGCGCCCGTGCAGCTCGCCAGGACCAAGGTGCGCGTGTTCCTCGCCGGCAACGGCTCCAGCGAGCGGGTCCCGGACT
TCGTCATCGGTGGCAGGCTGGCAGCTACTACGCCGGCGCGTGCATTGTCTCTGCTGGAG------------GCGACGACT
CCGAC---------------------------------------------------------------------------
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-----------------------------------------------------------------TGCGCCTGGGAGGGA
GTTGAGTTGTGGGCCATTTA-TCAAACTCACATCCAGCGACCGCAGAGAAGGTCAACACGCATTGATTTTTTTTAAAACA
---TACAAATGTTTCCCGCTTTTAGTGGGCTCTATTTTCAGAGTCAAAACTGGAACCTTAGGATTTTTTTGGTTGTTC--
TGATTTTTAGATGAGACTGGCCCAATATCTTTTGAAATAGACAATTATTTTCATCCTAAAATCATAATTTTTTCTAGCGA
TCCTAATGATCATCCTTCCAAATAGAAGTTTTAAGCACAATAGACTGTCCATGGCAACATGTAAGCATGTAAGAGTTGTC
AAATGG-AATTGGTGCCCACGATGGTTCATCCGCACCTTCTCCTCTTTCCTAGACGCCCGTACCATTTCCAACGAATCCT
TATTTCTTAGGTTATTTGAATCATGCCATACCAAATGTACACTCCAAAATGTATTGCTGTTAAATTTTACATTCACCTCT
CCAAATCTGGGGATATAATGTCAGCCGAAGTGTTGGCTAAATATTTAGGTTGAGACGG
>SNPs
------------------------------------S--------------S-------------S--------------
--------S----------------------------S-S------------S----S----------------------
-SS-------------------------------------S---------------------------------------
---S----------------SSS----------S---------S----------S--------------S-S-----S--
S------------------------S------------------------------------------------------
--------------------------------S------------S----------------------------------
---------S------------------------------S---------------------------------------
-------------------S-----------------------------S---------------------------SSS
SSSSSS--------------------S-------------------S----------------S----------------
-----------------------S--------------------------------------------------------
-S---S----------S---S----------S------------------------------------------------
-----------------------S----------------------S--S--------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
----------------------------S---------------------------------------------------
-----------------------------------S--------S--------------------------S--------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S---------------S-------------------
---------S----------------------------------------------------------------------
-----------------------------------------------------S--------S-----------S-----
-S---------------------SS------------S--S-------S---S----------------SS---------
----S-------------S------SSSSSS---S----SS--SS-----SS--SS----SSS--S--------------
----S-S-S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--S-----S-
S------------------SS---------SS--------------------S-S--SS----S--S--S-SSSSSSS-S
SSS---------------------------S------S----------S------S--------------SSSSS-SSSS
---------------------S--------S--------SS--SSSSSS-----------------S-----S-------
-------------SS-----------------------------------------------------------S-----
------S-----------SS--------------------------------S-------------------S-S-----
-S----------------------------S------------SS-----------------------------------
-------S--S--------------S---------------S-S-----S--------
>forward_321
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CGGCGTCCATCCATGTTCT
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_2278
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AGCCATGTTGCATTTGCTGG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
