>input_sequence_73477
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---------AGATCGAGAGACAATACGCCACCATCATGGCCGTGGGCACATCCTCTTCTATGCTCGGCGGCGCTTTCCTT
CTCCT---CGTCCTCTCCTCGGCCACTGATGTTCACGGCGGGCCAAGCTCCAGCGCCGCGCCACGTTCCCCGCTGGACTA
CCTCTGCAACAACCTCGGACCTGCGTACGTCGGGGCGAACCTCTGCGTGTCCACGCTCTGCATCGACCCCTCCTGCCGCT
CTACGCGCGGCTTGCCGGGGCTCGCAGTGATCGCCACCAGGCTGACAGTGTCCAACGCCACGGTGGCCAAGGCGAGCATC
GAGCATGCGCTCGCCCACGCCAAGGACGGCAAGGCCAGGAAGGCCATGCGGTCGTGCCTCCAGCTCTACACCGGCGC--C
ATCCCAAGGCTGCAGTGGGCGGCGCGGTCGGCTGCTGCTGGGCGATATAGCGGTGTACCGGAGGTGCTACTGGCTGC---
TAGGTACGTCTCAGATAAGTGCACCAATTTGGCCGG---CGAGGGGGCACTTCCCAAGGAGAACGTTGAGTTCTTCATGA
TGGCCTTCGTCGCGGAGGCCGTTGTCGAAGGGGTGCAGC---TTTTTATCGGCTGACCAATGGATGAA-TAACCCGCTTT
TCCCCTCGGTAATAAT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr3D_1_TraesCS3D01G061400
ACGTGATCGTGAGCGCGCGGCGAAGACACGACGAGGGTCGGCACGGCGCCGAGGCGGAGGAGCATCACGCTGTCTGTTGG
CTAATATGTTCGGGTGTCATATCCTCATCACATGTAAGCATTGGTCCCCAGGGAATATGTTTGGATCTGGCCAAGCTGTC
ATCTCTGCTGAATCCATCTGGATGGGTCGGCCCTCGTGGTTCTTAGTCAGTTTGCAGGTATGGTCCTTATGGTCTACTTC
TTTTTCTTTGTCGACGATGAGCCAGCTCTTTGGGGT-CTTAGCACAATGACTTCCCAACCGTCGACTATAAATAAGGTTT
ACCCGACTTTGATGAGAAAAGGGCGATGATAGACGGAAGCACAACTTGGGCTCATTCTCATGCTTGTAGACTTTGCAGTC
TGCGTTGGGT-GGTTCATGAACCTGATTGTAATATTTGTCACCTCTGATG------GTAGTGTTGTTGCAAGTTATTTGG
GCTGTCACAGTGTTTACAGACGAATATAGAATCATTGGGCTGATCTAACCAAACATGGCGGCCAGTATCTAGGAATAAAG
CGTGCTTCGCGAGTTTGTGAGCCTGCTGCGAGCGGGGTCAAGGCGGCCAACAAATGAAACAATTTGGGCTGCGCTTGTTG
TTTGACTCTCTCTCTCGCGTAAAAAAAAATATAACCCACACGAGTCTTCGCATTTTAATCGGACGGTCAGGGGCATGAAT
GGGACCGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTTATTTTTC
AGCTAGCTTAATTTTAACAAAACCGCTCATTTAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TAAGCTAAAAATACGATGTGTAATCCTGAGATCTTTTGTGATTCGCTTTCAATGAAGTACTATGATTGCATAT----GTC
CAGTTTCAGATATACGCTTCCTACGTATGGATTTATGAAGCATATCTCAAATGATTCGAT-GAACCTGATGGATTTATTT
TCTTTTATTTATGATAT--GATACACCGCCTACTAAGATTAGACT------TATAAGAAGAGACAAATGGGAGAGAGGGA
GGGTGAGACAGATCGAGAGACAATACGCCACCATCATGGCCGTGGGCACATCCTCTTCTATGCTCGGCGGCGCTTTCCTT
CTCCT---CGTCCTCTCCTCGGCCACTGATGTTCACGGCGGGCCAAGCTCCAGCGCCGCGCCACGTTCCCCGCTGGACTA
CCTCTGCAACAACCTCGGACCTGCGTACGTCGGGGCGAACCTCTGCGTGTCCACGCTCTGCATCGACCCCTCCTGCCGCT
CTACGCGCGGCTTGCCGGGGCTCGCAGTGATCGCCACCAGGCTGACAGTGTCCAACGCCACGGTGGCCAAGGCGAGCATC
GAGCATGCGCTCGCCCACGCCAAGGACGGCAAGGCCAGGAAGGCCATGCGGTCGTGCCTCCAGCTCTACACCGGCGC--C
ATCCCAAGGCTGCAGTGGGCGGCGCGGTCGGCTGCTGCTGGGCGATATAGCGGTGTACCGGAGGTGCTACTGGCTGC---
TAGGTACGTCTCAGATAAGTGCACCAATTTGGCCGG---CGAGGGGGCACTTCCCAAGGAGAACGTTGAGTTCTTCATGA
TGGCCTTCGTCGCGGAGGCCGTTGTCGAAGGGGTGCAGC---TTTTTATCGGCTGACCAATGGATGAA-TAACCCGCTTT
TCCCCTCGGTAATAATAAGATAAAGCCGCTGTCAAAACTGTAACAACTATGCAATGGTGTATTTGTGGCCGGCCAATCAA
GTCACCGTTGCTTGGTCCCTTTTC---GTTGTTGTTGTGTGAATATAGATAGACTGCGTTGGGCTGTGGTTGGTGGTTGC
TCGACCGGAACGACCGACCC----------------------GTCTACGTGTTTAGTG----------------------
------------------------------------------------------------ACAAAAACAACAACAAATAC
GTGCTTTATTTGACGCTCAGGCTGGACGGAGCAAGCGGGCTTTTC-----------GGCCC-----------GCTCAGCA
CCGGACCGGACGGTCCTGGCCCGCTCAAAAAATT----GGCCAGTCGGGATACAAAATTTCGGCCA-------------G
TCCGGTCCGGTCTTTGACCGGTCCAACCGAGCGGACCGAAGCACGCTGCAGGCTGTTCATCGTCATCGCGGCAAGCGGCG
GCACCATTCTCT-GCCGGTGAGATGCGTGCGCCGCGAGTCCAACGGCCACGCCCTGGCATCCTTCTCCCGCGCGACCGCG
CCCCTCCTCGATTTG-TTTCTTTTATTCAGTCGAACAG-AGAAGAAAACTCATGTCACGCGCATCATCAGGTAGAAGAGA
ACAGAAA-TAGAAAGAACACGCTGTCACACCCGTGATTATCGAGAGGAACAGGGGCAGGAGACAGTCACGCCCCA--CTT
CCTTGTTATCCTTTTAAT----------------------------------CATCCAGTTTGACCCGATAATTAAGGCG
CCTTCCCAGGACAACTCCTCGCTGCCGTTCCTTTTATTCAATTGAACATGCACAAAATAGTACTAGGAACGAGAAAAAAA
ATGGTTCGATCCGACAATCATGGTGTCAACTTCACGCCTCTGCCTCGCGCCGCCGCTCCCTCGCGGGGCTGTTGCCCCTC
TCCCCTGTGTGGGTGTGCCGCTCCCTCCCTCTCCTGTGCCTCTCCCACGCGCCTCCGCGCATGAGGTGTGTCTTCTCCGG
CTCCGGCCATCGTGTTGCTTCTCTAACCACCTCGCCGACATCTTGGGCCCACATGGTGTCATGGCCGGTTTTCCGGGACA
TA
>chr3A_12
-----------AGCGCGCGGCGAAGACACGACGAGGGTCAGCATGGCACCCAGGTACAGGAGCATCACGTTGTCTGTTGG
ATAATATGTCCGGGTGTCATATCGTCATCACATGTAAGCATTGGTCTCCAGGGAATATGTTTGGATTTGGCCAGGC-GTC
ATCTCTGGTGGATCCGTCTGGATGGGTCAGCCCTCATGGTCCTTGATCTGTTTGCGGGTATGGTCCTTATGATCTA-TTT
TTTTTCTTTGTCGACGGTGAGCCAGCCTTTTGGGGTCCTTAGCGCAATGACTTCCCAACTGTCAACTATAAATAAGGGTT
GTCCAACTTTGATGAGAAAAGGACGATGACAGACGGAAGCACACCTTGGGCTCATTCTCATGCTTGTAGACTTTGTAGTC
GGCGTTTGGAAGGTTTATGAATCTGATTGTAATATTTGTCACTTCCGATGATCTTTGTAGCGTTGTTACAAATTATATTA
ATAGGATTGGGGGACTTCTCTAA---------------------------------------------------------
--------------------------------------------------------------------------------
------------G--------AAAAAAATTGTAGACCTCGCGAATTCATGTTTGTTGATGGAACTAATTAACGCGAGTAC
TCATTAGTAAATTCTAATTTAGCCATCACATTAAAACCATTAAGCTACGCGTGAAGGGCGGTCAACCAGCTATGCCACGT
GGTGCAAACTGGTTGCCCACGGTGATAAATCTTTTGTAATTTTTCAGATGAAGGTGTGGATTATTTTTTAAATGTATTTT
TTAGATGGAGATGAGGACCTCTGATATTTTTTAAATGGTGGGTTATGCAAAGTGGCACTCGCTAGTAGGTTGTTGTGGTA
ATTTTTTTTCTTTTTTAGATGAAGGTGAGGATTAACTTTTTTTGAGATTTTTTTAGACAGAGGCCAAGACTTTATTTTTT
TTAAATAGAAACGTGTGCATAGCTTCCTCTCAATCTGCGCCACAGGATGGCGCTCCAATCACTAGTTATTGACACTGGAG
GTACAGTATGACGACCGGTCGCTGGCGGTGGTGGCATGCCTTTGCCACGTCATCCTTTGGTTTGACTATTGAGCAGCGCG
GTGACCGTGTTGGTGAGTGTTAGGGACCTTTTGTGATCTCACTAATAGCACATGATTACTCTTGGATACAAGGATTTGGA
TATGCTAATAATACGATGTGTAATCCTGAGATCTTTTATGATTCGCTTCCAATGAAGTACTACGATTGCATAT----GTC
CAATTTCAGATATACGCTTCCTACGTATGGATTTATGAAGCATATCTCAAATGATTTGATCGAATTTGATGGATTTATTT
TCTTTTATTTATGATAT--GATACACCGCCTACTAAGATTAGACT------TATAACAAGAGACAAATGGGAGAGAGGGA
GGGTGAGACAGATCGAGAGACAATACGCCACCATCATGGCCGTGGGCACATCCTCTTCTATGCTCGGCGGCGCTTTCCTT
CTCCT---CGTCCTCTCCTCGGCCACTGAAGTTCAGGGCGGGCCAAGCTCGAGCGCCGCGCCATGTTCCCCGCTGGACTA
CCTCTGCAACAACCTCGGACCTTGGTACGTCGGGGCGAACGACTGCGTGTCCACACTCTGCATCGACCCCTCCTGCCGCT
CTGCGCCCGGCTTGCCGGAGCTCGCAGTGATCGCCACCAGGCTGACGGTGTCCAACGCCACGGTGGCCAAGGCGAGCATC
GAGCATGCGCTCGCCCACGTCAAGGACGGCAAGGCCAGGAAGGTAATGCGGTCGTGCCTCCAGCTCTACACCGGCGC--C
ATCCCAAGGCTGCAGTGGGCGGCGCGGTCGGCTGCTGCTGGGCGATACAGCGGTGTACCGGAGGTGATACTGGCTGC---
TAGGTACGTCTCATCTAAGTGCACCAATTTGGCCGG---CGAGGGGGCACTTCCCAAGGAGAACGTTGAGTTCTTCATGA
TGGCCTACGTCGCGGAGGCCGTCGTCGAAGGGGTGCAGC---TTTTTATCAGCTGACCAATGGATGAA-TAACCCGCTCT
TCCCCTCCGTAATAATAAGATAAAGACGCTGTCAAAACTGTAAGAACTATGCAATGGTGTATTTGTGGCCGGCCAATCAA
GTCACCGTTGCTTGGTCCCTTTTC---GTTGTTGGTGTGTGAATATAGATAGACTGCGTTGGGCTGTGGTTGGTGGTTGC
TCGACCGGAACGACCGA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>chr3D_474
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CTGTCACAATGTTTACACACGAATATAGAATCATTGGGCTGATCTAACCAAACATGGCAAGCAGTATCTAGGAATAAAC
TGTGATTCGCGAGTTTATGAGCCTGCTGCAAGCGGGGACAAAGCGGCCAACAAATGAAACAATTTGGGCTGCACTTGTTG
TTTGACTCTCGCG--------TAAAAAAATATAACCCACACGAATCTTCGCATTTTAATGCGACGGTCAGGGGCGTGAAT
AGGACCAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTTATTTCTC
AGCTAGCCTAGTTTTAACAAAACTGCTCATTTAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TATGTTAAAAATACGATGTATAATCCTGAGATCTTTTGTGATTCGCTTCCAATGAAGTACTATGATTGCATATATATGTC
CAGTTTGAGATATACGCTTCCTACGTATGGATTTATGAAGCATGTCTCAAATGATTCTATCGAACCTGATGGATTTATTT
TCTTTTATTTA--ATAT--GATACACCGCCTGTTAAGATTAGACT------AATAAGAAGAGACAAATGGGCGAGAGGGA
GGGAGAGACAGATCGAGAGACAATACCCCACCACCAAA-----------------------------CGGCGCTCTCCTC
CTCCT---CGTCCTCTCCACGGCCATTGATGTTCATGGCGGATCAAGCTCCAGTGCCGCGCCACGTTCCCCGCTGGACGA
CCTCTGCAACAGCCTTGGACCTGGGTACGTCACGCCGAAGCTCTGCGTGTCCACGCTCTGCATCGACCCCTCCTGCCGCT
CTACGCGCGGCTTGCCGGGGCTCGCAGTGATCGCCACCAGGCTGACGGTGTCCAACGCCACGGTGGCCAAGGCCAGCATC
GAGCATGCGCTCGCCCACGCCAAGGACGGCAAGGCCAGGAAGGTCATGCGGTCCTGCCTCCAGCTCTACACCGGCGC--C
GTCCCAAGGCTGCAGTGGGCGGCGCGGTCGGTTGCTGCTGGGCGATATAGCGGTGTACCGGATGTGCTACAGGCTGC---
TAGGCACGTCTCATCTGAGTGCACCAATTTGGCCGC---CAAGGTGGCACTTCCCAAGGAGAACGATGAGTTCTTCATGA
TGGCCTACGTCGCGCAGGCCGTCGTCGAATGGGTGCAGCAGTT-----------------TGGATGAA-TAACCCGCTCT
TCCTCTCCGTAATAATAAGATAAAGACGCTGTCAAAACTGAAACAACTATGCAATGGTGTATTTGTGGCCGGCCAATCAA
GTCACCGTTGCTTGGTCCCTTTTC---GTTGTTGTTGTGTGAATGTAGATAGACTGTGTTGGGCAGTGGTTGGTGGTTGC
TCGACCGGAACGACCGACCGCAATACCTACATCTACCTCTACTTCTACGTGTTTAGTGGTCTCTAGCAAGCCACGACCGA
CTCCTGTTTCACATACGTGAGTCGCAGGCTC---ACGACTGCTCGCCGCTAGTGACAAAAACAAGG--------AAATAC
GTGTTTTATTTGACGCTCCGGCTGGACGGAGCAAGCGGGCTTTTC-----------GGCCCATTCGTGGCCCGTTCGGGA
CCGGACCGGACAGTCCTGGCCCGCTCAAAAAATT----GGCCGGTCGGGATACAAAATTTCGGCCTGG-AATTTACTCGG
TCCGGTCCGGTCTTTGACTGGTCCGACCGAACGGACCGAAGCGTGCGGCAGGCTGTTCATCGTCATTGCGGCAAGCGGCG
GCACCATTCTCT-ACCGGTGATATGCGCGCACCGCGAGTCCAACGGCCACGCCCTGACGTCTTTCTCCCGCGCGACTGCA
CCCCTCCTCAATTTG-TTTCTTTTATTCAGTCGAACAG-AGAAGAAAACTCATGTCACGCGCATCATCAGGTAGAAGAGA
GCAGAAG-TAGAAAAAACACGCTGTCACACCCGTGATTATCGAGAGGAACAGGGGCAAGAGACGGTCACACCCCA--CTT
CCTTGTTTTCCTATTAAT----------------------------------CATCCAATT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chrUn_756
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTCATTTA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ATGCTTAAGATACGGCGTACTATCCTGAGATCTTCCGTGATTCGCTTACTATGAAGTG---TGATTGCATATATAAA--
-AGTTTGAGATATATGCTTCCTA-GTATGGATTTGTGGAGCATATCTCAAATGATTCGATCAAAGCTGATGAATTTATTT
TCTTTTATTTATGATATATGATACACCCACCG-TAAGGTTGAACT------AATAAGAGGAGACAAGGAGGGCAGCGGGA
GGGAGAGACAGATCGAGAGACAATACGCCACCACCATGGCCGTGGGCACATCCTCTCTGATGCTCGGCGGCGCTCTCCTC
CTCCT---CGTCCTCTCCACGACCACTGAAGTTCACGGCGGGCCAAGCTCCAGAGCCACGCCATGTTCCCCGCTGCCCCA
GCTCTGCACCAGTCTCGGACCTTGGTACGTCGGGCCGAACGACTGCGTGTCCACACTCTGCATCGACCCCTCCTGCCGCT
CTGCGCCCGGCTTGCCGGAGCTCGCACTGATTGCCACCAGGCTGACGGTGTCCAACGCCACGGTGGCCAAGGCGAGCCTC
GAGCATGCGCTCGCCCTCGCCAAGGACGGCAAGGCCAGGAAGGTCATGCGGTCGTGCCTCGAGCTCTACACCGGTGC--C
GTCCCAAGGCTGCAGTGGGCGGCGCGGTCGGTTGCTGCTGGGCGATATAGGGGTGTACCAGAGGTACTACTGGATGC---
TAGGTACGTCTCATCTAAGTGCACCAATTTGGCCGG---CGAGGGGGCACTTCCCAAGGAGAACGTTGAGTTCTCCATGA
TGGCCTACGTCGCGAAGGCCGTCGTCGAATGGGTGCAGC---TTTTTATCGGCTGACCAATGGATGAA-TAACCCGCTTT
TCCCCTCCGTAATAATAAGATAAAGCCGCTGCTAAAACTGTAACAACTATGCAATGGTGTATTTGTGGCCGGCCAATCAA
GTCACCGTTGCTTGGTCCCTTTTTCATTGTTGT---------------------TGTGTTGGGAAGTGGTTGGTGGTTGC
TCGACCGGAACGACCGACCGCAATACCTACATCTACGTCTAAGTCTACATGTTTAT------------------------
---------------------------------------------------GTGACTAAAACAACAACGAATAC---TAC
ATGTTTTATTTGACGCTCAGGCTGGATGGAGCAAGCGGGCTTTTTGGCCCGCTCATGGCCC-----------GTTCAGGA
CCGGACCGGACGGTCCTGGCCCGCTCAAAAAATT----GGCCGGTCAGGATACAAAATTTCGGCCTGG-AATTTACTCGG
TCCAGTCCAGTCTTTGACCGGTCCAACCGAGCGGATCGAAGCGCGCTGCAGGCTGCTCATCGTCGTCGCGGCATGCGGCG
GCACCATTCTCT-GCCGGTGAGATGCGCGCGCCGCGAGTCCAACGGCCACGCCCTGACGTCCTTCTCCCGCGCGACCGTG
CCCCTCCTCGATTTG-TTTCTTTTATTCAGTCAAACAG-AGAAGAAAACTCATGTCGCGCGCATCATCAGGTAGAAGAGA
ACAGAAG-TAGAAAGAACACGATGTCACACCCGTGATTATCGAGAGGAACAGGGGCAAGAGACAATCACGGCCCA--CTT
CCTTGTTTTCCTTTTAAT----------------------------------CATCCAATTCGATCCGATAATTAAGGCG
CCTTCCCGGGACAACTCCTCGCTGTCGTTCCTTTTATTCAA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chrUn_756
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTCATTTA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ATGCTTAAGATACGGCGTATTATCCTGAGATCTTCTGCGATTAGCTTACTATGAAGTA---TGATTGCATATATAAA--
-AGTTTGAGATATATGCTTCATA-GTATGGATTTGTGGAGCGTATCTCAAATGATTCAATCGAAGCTGATGAATTTATTT
TCTTTTATTTATGATAT--GATACACCCACAG-TAAGGTTGAACT------AATAAGAAGAGACAAGGAGGGCAGCAGGA
GGGAGAGACAGATCGAGAGACAATAAGCCACCACCATGGCCGTTGGCACATCCTCTCTGATGCTCGTCGGCGCTCTCCTC
CTCCT---CGTCCTCTCCTCGGCCACCGAAATCCACGGCGGGCCAAGCTCCAGAGCCGCGCCATGTTCCACGCTGGCCCA
GCTCTGCACCAGCCTCGGACCTTGGTACGTAGCGCCGAACGTCTGCGTGTCCACACTCTGCGTCGACCCCTCCTGCCGCT
CTGCGCCTGACTTGCCGGAGCTCGCAGTGATCGCCACCAGGCTAACGGTGTACAACGCCACGGTGGCCAAGGCCAGCATC
GAGCATGCGCTCGCCCACGCCAAGGATGGCAAGGCTAGGAAGGTCATGCAGTCGTGCCTCCAGCTCTACACAGGCGC--C
GTCCCAAAGTTGCAGTGGGCGGCGCGGTCGGTTGCTGCTGGGCGATATAGCGGTGTACCGGAGGTGCTAGAGGATGCATC
TAAACATGTCTCATCTGAGTGCACCGATTTGGCCGG---CAAGGTGGCACTTCCCAAGGAGAACGGCGAGTTCTTCATGA
TGGGCTACGTCGCGAAGGCCGTCGTCGAATGGGTGCAGC---TTTT---CGGCTGACCAATGGATGAA-TAACCCACTAT
TCCCCTCGGTAATAATAAGATAAAGACGCTGTCAAAGCTGTAACAACTATGCAATGTTGTATTTGTGGCCGGCTAATCAA
GTCACCGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr3B_756
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTCATTTA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ATGCTTAAGATACGGCGTGTTATCCTGAGATCTTCCGCGATTCGCTTACTATGAAGTG---TGATTCCATATATAAA--
-TGTTTGAGATATAAGATTTCTAGGTATGGATTTATGGACCAAATCTAAAATGATTTGATCGAACCTGATGGATTTATTT
TCTTTTACTTATGATAT--GATACACCCGCCGTTAAGGTTGAACT------AATAAGAAGAGACAAGGAGGGCAGCGGGA
GGGAGAGACAGATCGAGAGACAATACACCACCATCATGGTCGTGGGCACATCCTCTTCTATGCTCGGCCGCGCTTTCCTT
CTCCT---CGTCCTCTCCTCGGCCACTGAAGTTCATGGCGGGCCAAGCTCGAGCGCCGCGCCATGTTCCCTGCTGGACTA
CATCTGCATCAGGCTTGGACCTTGGTACGTCTTGCCGAACGTCTGCGTGTCCACACTCTGCATCGACCCCTCCTGCCGCT
CTGCGCCCGGCTTGCCGGAGCTCGCAATGATGGCCACCAGGCTGACGGTGTCCAACGCCACGGTGACCAAGGCCAGCATC
CAGCATGCGCTCGCCCACGCCAAGGACGGCAAGGCCAGGAAGGTCATGCGGTCGTGCCTCCAGCTCTACACAGGCGC--C
GTCCCAAGGCTGCAGTGGGCGGCGCGGTCGGTTGCTGCTGGGCGATATAGTGGCGTACCGGAGGTGCTAGAGGCTGCATA
TGAGCACGTCGCATCTGAGTGTACCGATTTGGCTGG---CAAGGTGGCACTTCCCAAGGAGAACGATGAGTTCTACATGA
TGGCCTACGTTGCTAAGGCCGTCGTCGAATGGGTGCAGC---TTTT---CGGCTGACCAATGGATGAATTAACCCGCTCT
TCCCCTCCGTAATAATAAGATAAAGACGCTGTCAAACCTGTAACAGCTATGCAATGGTGTATTTGTGGCCGGCCAATCAA
GTCACCGTTGCTTGGTACCTTCTTCTTGTTGTTGTTGTGTGAATATAGAGAGACTGTGTTGGGCAGTGGTTGATGGTTGC
TCGACAGGAACGACCGACCGCAATACCTACATCTACGT------------GTTTAGTGGTCTCAAGCAAGCCACGACCGA
CTCGTGTTTCACGTACGTGAGGTGCAGGCTGTTTACGACTGCTCGCCGCTAGCGACAAAAACAACAACAAATACGAATAC
GTGTTTTATTTGACGCTCAAGCTGGACGGAGCAAGCGGGCTTTTTGGCCCGCTCGTGGCCC-----------GTTCAAGA
CCGGACCGAACGGTCCTGGCCAGCTCAAAAAATT----GACCGGTCCGGTTACAAAATTTCAGCCCGAAAATTTACTCGG
TCCAGTCCAGTCTTTCACCGGTAGGACCAAGCGGACCGAAGCGTGCTGCAGGCTGTTCATCGTCACCGCGGCAAGCGGCG
GCACCATTCTCT-GCCGGTGAGATGCGCGCGCTGCGCGTCCAACGGCCACGTCCTGACGTCCTTCTCCCGCGCGACCGCG
CCCCTCCTGGATTTG-TTTCTTTTAGTCAGTCGAACAG-AGAATAAAACACATGTCACGTGCATCATCAGGTAGAAGAGA
ACAGAAG-TAGTAAGAACACACTGTCACACCCGTGATTATCGAGAGGAACAGGGGCAACAGACGATCACGCCCCA--ATT
CCTTGTTTTCCTTTTAAT----------------------------------GATCCAATTCGATTCGATAATTAAGGCG
CCTTCCCAGGACAACTCCTCGCTGCCGTTCCTTTTATTCAA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr3B_756
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTCATTTA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ATGTTTAAAATATGGCGTATTATCCTGAGATCTTCCACGATTCGCTTACTATGAAGTG---TGATTGCATATATAAA--
-TGTTTGACATATAAGATTTTTAGGTATGGATTTATGGAGCATATCTCAAATGATTTGATCGAACCTGATAGATTTATTT
TCTTTTAATTATGATAT--GATACACCCGCCGTTAAGGTTGAACT------AATAAGAAGAGACAAAGGGGGCAGAGGGA
GGGAGAGAC----CGAGGGACAGTACGCCACCACCATGGCCGTGGGGACATCCTCTTTGATGCTCGGCGGGGCACTCCTC
CTCCT---CATCCTCTCGTCGGCCACCGATGTTCACGGTGGGTCAAGTTCCAGCGCCGCGCCACGTTCCCCGCTGGACGA
CTTCTGCATCAGCCTCAGCAGCTGGTAC--------------------GTCCATGCTCTGCATCGACCCTTCCTTCCGCT
CTGCGTACGGCTTCCCGGAGCTCGCGGTGCTCGCCACCAGGCTGATGGTGGCTAACGCCACGGTAGCGAAGGCCAGCATC
TAGTCTGCGCTCGCCCACACCAAGGACGCCAAGCCCAGGAAGGTCATGCGGTCATACCTGCATCTCTACTCAGCGGCGTC
GTCCTGCCGCTGCAGTGGGCGGCGCGGTCAGTCGCTGCTGGGCGATATAGCGGCATACCAGAGAAGCTAAAGGCGGC---
GACGGACGCCTCATATGGGTGCACCAGATTGGCCGGAAACGAGGTGGCGCTTCCCAAGGAGGACGAAGAGTTCTACATGA
TGGCCTACGTCGTGCAAGCCGTCGTCGGATGGGTGCAACATGTTAT---CGGCTGACCAATCGATGAA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr3B_785
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TAATCCTGAGATCTTCGGCTATTCGCTTCCTATGAAG----ATGATTACATATATCAA--
-TGTTTGAGATATAGGCTTCCTAGGTATGGATTTATGGAGCATATCTCAGATGATTCCATCGAAGCTGCTGAATTTATTT
TCTTTTATTTATGATAT--GATACACCGCCCGTTAAGG-TGAACT------ATTAAGAAGAGACAGGGAGGGCAGCTGGA
GGGAGAGAC----CCAGAGAAAACACGCCAACACCATGGCCATGGGCACATCCTCTTCGATTCTCGGCGGCGCTCTCCTC
CTTGTCCTCGTCCTCTCCCTGGCCATTGATGTTCACGGTGGATCAAGCTCCAGCGCCGCGCCACGTTCCCCGCTGGATGA
CCTCTGCAACAGCCTCGGCAGCCACTACGTCACGTCGGACATGTGTGTGTCCGCGCTCTGCATCGACAACTCCTGCCGCT
CTGCACGCAGCTTGCCGGAGCTCGTGGTGCTCGCCACCAGGCTGACAGTGACCAATGGCACGGTAGCCAAGGCCAGCATC
GAGTCTGCGCTCGCCCATGCCAAGGACGCCAAGTTCAAGAAGGTCATGCGGTCGTGCCTGCAGCTCTACGTCGGCGC--C
GTCCCGCGGCTGCAGTGGGCGGCACGGTCGGTCGCTGGGGGGCGCTATAGCGGCGTTTCGGAGGTGCTAGAGGCGGCCTG
TTGGCACGTCTCGGCAGAGTGCATCAATTTGGCCGG---CGAGGTGGCGCTTCCCAAGGAGAACGGTGAGTTCTTCAGGA
TGGCCTACATCGTGCAGGCCGTCGTCGACTGGGTGAAGC---TTAGTATCGGTCACTGAATTCATTCATGAACCCG--CT
CCCCCTCCGTAATAAT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr1B_909
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TGGATTTATTT
TCTTTTATTTATGAT-T--GATACACCGCCCCGTTAAGGTGAACTATTAAGAATAAGAAGAGACAAGGTGGGCAGCGGGA
GGAGACC---------GAGACAATACGCCAACACCATGGCCGTGGGCACATCCTCTTCGATGCTCGGCGGCGCTCTCCTC
CTCCTACTTGTCCTCTCCTCGGCCATTGATGTTCACGGCGGGTCAAGCTCCAGCGCCGCGCCACGTTCCCCGCTGGACGA
GCTCTGCATCGGCCTAGGCGGCTGGTACGTCACGCCGGACATGTGCGTGTCCGCGCTCTGCATTGACCCCTCCTGCCGCT
CCGCACGCGGCTTGCCGGAGCTCGCGGTTCTGGCCACCAAGCTGACGGTGGCCAACGCCACAGTAGCCAAAACCAGCATC
GAGTCTGCGCTCGCCCATGCCAAGAACGTCAAGGCCAGGAAGGTCATGCGGTCGTGCCTGCAGCTCTACGTCGGCGC--C
GTCCCGCGGCTGCAGTGGGCGGCGCGGTCGGTCGCTGCGGGGCGATATAGCGGCGTTCCGGACGTGCTAGAGGCAGCCTA
TAGGGACGTGTCACAGGGGTGCAGCAGCTTGGCCGG---CGAGGTGGCGCTTCCCAAGGAGAACAACGAGTTCTTCATGA
TGGCCTTCGTCGTGCACGCCGTCGTCGATCGGGTGCAGCGTATTAT---CGGCTGACCAATCGATGAA-TAACCCGCTCT
TCCCCTCC---ATAATAAGATAAAGACGCTATCAAGTCTCTAACA----TGCAATGCTGTATTGTGG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chrUn_1810
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ACAACAACAAATACGAATAC
ATGTTTTATTTGACGCTCATGCTGGACGGAGCAAGCGGGCTTTTTGTCCCGCTCGTGGCCC-----------GCTCAGGA
CCGGACCGGACGGTCCTGGCCCGCTCGAAAAAATGGCCGGCCGGTCGGGATACAAAATTTCGGCCTGG-AATTTACTCGG
TCCGGTTCAGTCTTTGACCGGTCCAACCGAGCGGATCGCACCGCGCTGCAGGCTGCTCATCGTCGTTGCGGCAAGCGGCG
GCACCATTCTCT-GCCGGTGAGATGCGCGCGCCGCAAGTCCAACAGCCACGCCCTGACGTCCTTCTCCTGCGCGACCGCG
CCCCTCCTCGATTTG-TTTCTTTTATTCAGTCGAACAG-AGAAGAATACTCGTGTCGCGTGCATCATCAAGTAGAAGAGA
ACAGAAG-AAGAAAGAACACGCTGTCACACCCGTGATTATCGAGAGGAACAGGGGCAAGAGACAATCACGGCCCA--CTT
CCTTGTTTTCCTTTTAAT----------------------------------CATCCTATTAGATCCAATAATTAAGGCG
CCTTCCCGGGACAACTCCTCGCTGTCGTTCCTTTTATTCAA---------------------------------------
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>chr7D_1875
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--------------------------------------------------------GGCCC-----------GTTCAGGA
CTGGACCGTACGGGCCTGGCCCGTTCAAGAAATT----GGCTGGTCCGGTTACAGAATTTCGGCCCGA-ACTTTACTCGG
TCCGGTCCGGTCTTTGACCAGTCCGACCGAGCGGACCGAAGTGTGCTGGAGGCTGTTCATCGTCATCGCGGCCAGCGGCG
ACACCATGCTCCGGCCGGTAAGATCCGCGCGCTGCGAGTCCGACGGCCACGCCCCGACGTCCTTCTCCAGCATGGCCGTG
CTCCTCCTCGATTTGTTTCCTTTTATTTAGTCGAGCAGGAGAAGAAAACTTATGTCGCGCG---CATCAAGCAGAAGAGA
ACAGAAAATAGAAATAACACGCTGTCACACCCGTGATTATCGAGAGGAAAAGGGGCAAGTGGAAGTCACGCGCCCTGCTG
CTTTGTTTTCCTTTTAATTAATCGAGAGAAATACTGAGAACAAGATAAACGAGATTCAATTCGATCCGATAATTAAGGCG
CCTTCCCACGACAACTCCTCGCTGCCGTTCCTTTTATT------------------------------------------
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--
>SNPs
SSSSSSSSSSS----------------------------S---S---S--S---SSS------------S----------
S--------S-------------S----------------------S-------------------S------S--S---
-------S--S----S------------S------S----S---SS--S------S---------------S----S--S
----------------S---------SS---------------S---------------S---S-------------S--
SS--S-----------------S------S-------------S-------------------------------S----
S-----S--S-----S-----S--------------------S--S--------------S------S---S----S-SS
S-----------------S----------------------------------------SSS-----------------S
S---S-----------S------------S-------S---S------------------------------S-------
----------S-SSSSSSSSS----------------------S---------------S--------------S-----
S-------------------------------------------------------------------------------
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-------S---------------S---------S----------------------------------------------
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--S---------------------------------------------S-------------------------------
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-----------------------S--------------------------------------------------------
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-------------------------------------------S------------------------------------
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----------------------S---------------------------------------------------------
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-------------------S------------------------------------------------------------
----------------------------------------------------------------S-----SS--------
---S--------------------------------------------------------------------------S-
------------------------------------------S----------------------S--------------
------------------------------------------S-------------------------------------
---------------------------S----------------------------S-S---------------------
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---------------------------------------------------------S----------------------
-------S--------------------------------------------------S--S--S---------------
-----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_422
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--GCGTTGGGTGGTTCATGAAC----------------------------------------------------------
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>reverse_3140
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-------------------ATGGTGTCAACTTCACGCCT-----------------------------------------
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--
