>input_sequence_73314
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------------------ATGGAAGAAGGCATCAAAGAAGCCGAGTCGAGCAAGAAAGCAGCAGCAGC------CGAGAG
CACAGCGACCAAAGTGGGCGTCATGGCCGACTCGACGTTCGGGAGCATCGGCGACGTGCTCAAACTGCTGCCGACGTCGA
CGGTGATCGTGTACGAGGTGCTCAACCCGATCGTGACCAACGCCGGCGCGTGCAGCGTGGCCAACAGGGTGGTCACCGCG
GCGCTCCTCGTGCTCTGCGCCTTCTCGTGCGCCTTCTCGGCCTTCACTGACAGCTTCGTCGGCGCCGACGGCAAGGTCAG
GTACGGCCTCGTGACGCCCAGGGGCCTCCTGCCGTTCGGCGGCGGCGACGACGACGACGCCGGGGCGAGGGACTTCTTCA
AGTACAGGCTGCGCCCGGCGGACTTCGCGCACGCCTTCTTCTCGGTGGTCGTGTTCGCGGCCGTGGCGCTGCTGGCCGAC
GCCAACACGGTGGCGTGCTTCTACCCGGCGCTCAGGGAGCAGCAGAAGCAGGTGGTCATGGCGCTCCCCGTCGTGGTCGG
CGCCCTCGCGAGCGGCGTCTTCGTCGTCTTCCCCTCCAAGCGCCACTCGATCGGGTACCCTCCGGCGAAGCCTGCCGCGA
GCTCGCTGGCGTCGCAGTAG------------------------------------------------------------
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>chr2A_1_TraesCS2A01G141700
GAGGTTTGTTCGATGTACGGCTTCAAAGCTTGATG------CCCATCCTTCCGCCACTCACTAGCCAGTGACCTACTGCC
ACAGTTTACCAGCAACCT-------CATAGCGGCAAGTCTCCCTTCATTCATCGAAAGCCGGCCACCGAAGAGATCATTG
TCACTGGGGGGC--GATGCTCCCGTCCTCAT-----------------------TAGACGCGTCATGGCCTCTGAAATCT
CATTGTCACTCTACTTATCTGATACATGGGTCATAAGTCTCTGAAGTTCCTTTGAACATTGCCAAACCTTGCTT------
GCTGGTCACATATCCTTTCCAGGATCTTCACTCGCCACCCCTGTCAGCAAAAACTCAAGCAACATACATGTAGCAATCTC
TTGGTCTCGACCATGGAGGTCAACGTCTGCAGATTTTCTAAGGAAAGTGCAGCTTTCATAACTGAGAAGGCTTAATTTCA
ACCAG---TAGGCTAGTACGTATCCACTGAGTAGAATACACTTGCAT-----------CCTACGTGGACGTCCAATCTAG
GGGCAGCGTCACGATCGCATTGTAGTCTCTCACCAGTACGAGACGATAGGCTAAGATGACCATTTCTTTCGTCCCTGCCT
GCAAGAAACTCCCGAGACAATTAATCTGCAACGAGTGAGCTCACAACACGCGATATAAAAATGTGTGCAGGTTTATAGAT
TGGTGTCATGAACAAGCAATCCGACCTAATCAATCATGAAAACTCTTCATGAAACTATCCCTTCGCGACGCATCGCTGTC
AGGTTCTTAGAAAAATTTCGTACATATGGACTTCGCGGCTGGAGGAATTTAATATCATCCTGCAAATGTGGGCAACATGT
ACGTCAATTTGGTTACTATCACATTGCAATTTACAACCAAGACAAGCTACCACTATTTCTACCGGAGTAAGCAACCGGAT
TAGTTTCCAAGCTCCCATGGATTTCTTTAGGCCCAGATGGCCTATAAAATAGGTAAATTAGAGAAGGAAGGAGGGCAGGG
GATAGCTTAAATCAGCTGATGGAAGAAGGCATCAAAGAAGCCGAGTCGAGCAAGAAAGCAGCAGCAGC------CGAGAG
CACAGCGACCAAAGTGGGCGTCATGGCCGACTCGACGTTCGGGAGCATCGGCGACGTGCTCAAACTGCTGCCGACGTCGA
CGGTGATCGTGTACGAGGTGCTCAACCCGATCGTGACCAACGCCGGCGCGTGCAGCGTGGCCAACAGGGTGGTCACCGCG
GCGCTCCTCGTGCTCTGCGCCTTCTCGTGCGCCTTCTCGGCCTTCACTGACAGCTTCGTCGGCGCCGACGGCAAGGTCAG
GTACGGCCTCGTGACGCCCAGGGGCCTCCTGCCGTTCGGCGGCGGCGACGACGACGACGCCGGGGCGAGGGACTTCTTCA
AGTACAGGCTGCGCCCGGCGGACTTCGCGCACGCCTTCTTCTCGGTGGTCGTGTTCGCGGCCGTGGCGCTGCTGGCCGAC
GCCAACACGGTGGCGTGCTTCTACCCGGCGCTCAGGGAGCAGCAGAAGCAGGTGGTCATGGCGCTCCCCGTCGTGGTCGG
CGCCCTCGCGAGCGGCGTCTTCGTCGTCTTCCCCTCCAAGCGCCACTCGATCGGGTACCCTCCGGCGAAGCCTGCCGCGA
GCTCGCTGGCGTCGCAGTAGCTAGTCCGGCCGGTGATCTCGATGTATGCGCTCTCCCGCCGTGTGCTATGTGTTTGCGTT
TCGCGGGCGTACATATTTTTTTTTAGTCGAGTTTT---------------------------CTGTGCGTAC--------
-ATGTGCCGTTCGCATGTGGT-----GCTTTTGGTTCGTCGCGGGTCGCGGACAAGGCCCAAATGTAAAAAAGTAAGTTC
GATTTTTTTAACACAGTACAAAAGTAAGTTCAATTCTGTA---------------------------CCCTTTTCTTGGT
ATAAATATTCCTTTTTTCAAAAAGACAACCGAAGGGCTTCTTCAGTATGATAAATTTTATTATAGGAAAACAGTAACCAG
GAAAGACAACAGGACACAAAACGA------TAAGCAAAAAAATACATCAAAAAATCATATTGAT-------AATATTTTT
CTTTTGATTGTACGTCGTACGCCGAAGCTTGAAAATTGCAATGAGCCGACC----ATAAGGAAAAGCCCGCAAACTTCCT
TGACATATTAAGCTTTGAAGACCGAAAAATGAAGAAAGAATCCCATTGCTAGAATGGGCTTATTTTAATATGAAATTACA
TGTCATTTCCTTTCAAAATGGATAAAATGAATACAAGTGAATTCAGATGATAATTCATGTTAGTGATGAAAAGAACTCTT
CTACTTCTTCGATATATTGCAATTTAAAGAAATGGAAAAAGTCATTCATCGTTAGAAAATAAGATCTAAAAACCACC---
GAAAAAACGGTTAGGGCATCACCCCATGCAGTTCATGCTTGCTATCTTGCAGTACTATCATAGAAGGTTGGAGAAATCGA
ACCATGCCGCATAACAAATCGAAAGAAGATGCTGAAATCATAGCACCAAGAGCCAGACAACTCTTCCCCTTGATTTGACA
CACTAAATGTTTAAATCCGAAGAAAACTAACAAATCTG---ACATCTACCCTCG--------------------------
------TCAAGATACCGAGAGACCAAAGAGACCTTATTTCAGTGTGTCATTGCTGCCACCATCTCGTCGATGACGCAAGA
CGGCTAGAGAAAGAAAAATGTAA
>chr2D_1
GAGGTTTGCTCGATGTACAGCTTCAAAGCTCGTTGCCTAATCCCATCCTTCTGCCACTCACTAGCCAGTGACCTACTGCC
GCAGTTTACCAGCAACCTGAGTCCCCAGAGCGGCAGGTCTCCCTTCATTCATCGAAAGCCGGACACTGAAGAGATCATTG
TCGCCGGGGGGCACGATGCTTTAGTCCTCATTTCCGAGGATGATCAGTCAGCTATAGCCGTGTCACGGCATCTGAAATCT
CATAGTCACTCTACTTATCTGATACATGGGTCATAAGTCTCTGAAGTTCCTTTGAACATTGCCAAACCTTGCTT------
CCTGGTCACATATCCTTTCCAGGATCTTCACTCGCCACCCCTGTCAGCAAAAACTCAAGCAACATACATGTAGCAATCTC
TTGGTCTCAAACATGGAGGTCAACGTCTGCAGATTTTACAAGGAAAGTGCAGCTTTCAGAACTGAGAATGACAAATTTCA
ATCATCATTAGGCTAGTACGTATCCACTTAGTAGAATACACTTGCATCAGTTTCCTAACCTACGTGGACGTCCAATCTAG
GGGCAGCGTCACGATCACCTTGTAGTCTTTCACCAGTACGAGACGATAGGCTAAGACGACCATTTCTTTCGTCCCTGCCT
GCAAGAAACTCCCGAGACAATTAATCTGCAATAAGTGAGCTCACAACACGCGATATAAAAATGTGTGCAGGTTTATAGAT
TGGTGTCATGAACAAGCAATCCGACCTAATCAATCATGAAAACTCTTCGTGAAACTATCCCTTCGCGACGCATCGCTATC
AGGATCTTAGAAAAATTTCGTACTTATGGACTTCGCGGCTGGAGGAATTTAATATCATCTTGCAAATGTGGGCAGCATGT
AATTCAATTTGATCACCATCACATTGCAATTTACAACCAAGACAAGCTACTACTATTTCTCCTAGAGTAAGCAACCGGAT
TAGCTTCCAAGCTCCCATGGATTTCTTTAGGCCCAGATGGCCTATAAAATAGGCAAATTAGAGAAGAAAGGAGGCCAGGG
GCTAGCTTAAATCAGCTGATGGAAGAAGGCATCAAAGAAGCCGAGTCGAGCAAGAAGGCAGCAGCAGT------CGAGAG
CACAGCGACAAAAGTGGGCGCCATGGCCGACGCGACGTTCGGGAGCATCGGCGACGTGCTCAAGCTGCTGCCGACGTCGA
CGGTGATCGTGTACGAGGTGCTCAACCCGATCGTGACCAACGCCGGCGCGTGCAGCGTAGCCAACAGGGTGGTCACCGCG
GTGCTCCTCGTGCTCTGCGCCTTCTCCTGCGCCTTCTCGGCCTTCACCGACAGCTTCGTCGGCGCCGACGGCAAGGTCAG
GTACGGCCTCGTGACGCCCAGGGGCCTCCTGCCATTCGGCGGCGGCGACGACGACGACACCGGGGCGAGGGACTTCTCCA
AGTACAGGCTGCGTCCGGCGGACTTCGCGCACGCCTTCTTCTCGGTGGTCGTGTTCGCGGCGGTGGCGCTGCTGGCGGAC
GCCAACACGGTGGCGTGCTTCTACCCGGCGCTCAGGGAGCAGCAGAAGCAGGTGGTCATGGCGCTGCCCGTCGTGGTCGG
CGCCCTCGCGAGCGGCGTCTTCGTCGTGTTCCCCTCCAAGCGCCACTCGATCGGGTACCCTCCGGCGAAGCCTGCTGCGA
GCTCGCTGGCGTCGCAGTAGCTAGTCCGGCCGGTGATCTTGATGTATGCGCTCTCCCGCCGTGTGCTATGTGTTTGTGTT
TTGCGTGCGTTCATGTTTTTGTTTTTTTAGGTTTTTTTAGACAACTTTTGTTTTTTCTTTAGGTGTGCGTTC--------
-ATGTGCCGTTCGCATGTGGCCTTGGGCTTTTGGTTCGTCGCAGGTCGCGGACAAGGCCCAAATGTAAAAAAGTAATTTC
GATTTAAATATTCTTTTTGTCTCAAAAAAAATTA----------------------------------------------
--AAATATTCTTTTTTCCAAAAGGACAGCTAAAGGGCATTTTACGTAAGATAATAATTA-TAAAGGAAAACAACAACCAA
GAAACACAATATGATGCAAAACGAGTATTCTAGGAAAAAAATTACATC-AAAAATAATATTGAC-------CATCTTCTT
CTTTCACTTGCACGTCATCCATCGAAACTTGAAAATTGAAGTGA----GCCAATAGTAACGAAAAACCTGCAAACGCCCT
CAACGTAGTAGGCTTTAAAGACCACAATGA--------------------------------------------------
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-----------------------------------------TCATTCATCGTTAGAAACG-AGATCTAAAAATTGTTGAA
----------TTAGGGCATCACCCTGTTTAGTACATGATTTTTGTTTTTCACTACCATTATAGAGGGTGGGAGAAACTAA
ACCATGCCGCATAACAATAT-------GACGCTGAAATCCTCCCACCCAGAGCCAGTCAGCTAATTTCCTTGATTTGACA
CACCAACTGTTTAAATCTAAAGAAAGCCAGCAAATCTGGCAACATCTACCCTCGCAGACCCTTCGTTGGAGTTGGATCAA
ATGACGTCAAGATAGTGAGAGGCCAAAGAGACCTTATTTCAGTGTGTCATTGTTGCCACCATCTTGTCGATGCTGCAAGA
CGGCTAGAGAAACAAAATGTAA-
>chr2B_224
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---------------------ATACATGGGTCATAAGTCTCTGAAGTTCCTTTGAAAATTGCCAAACCTTGCTTGCTGTT
GCTGGTCACATATCCTTTCCAGGATCTTCACTCGCCACCCGTGTCAGCAAAATCTCAAGCAACATACATGTAGCAATCTC
TTGGTCTCGACCATGGAGGTCAACATCTGCAGATTTTCTAAGGAAAGTGCAGCTTTCATAACGGAGAAGGCTTAATTTCA
ACCAG---TAGGCTAGTACGTGCCCACTTAGTAGAATACACTTGCATCAGTTTCCTAACCTACGTGGACGTCCAATCTAG
GGGCAGCATCACGATCACATTGTAGTCTTTCACCAGTACGAGACGATAGGCTAAGATGACCATTTCTTTCGTCCCTGCCT
GCAAGAAACTCCCCAGACAATTAATCTGCACCGAGTGAGCTCACAACACGCGATATAAAAATGTGTGCAGGTTTATAGAT
TGGTGGCATGAACAAGCAATCCAACCTCATCAATCATGAAAACTCCCCATGAAACTATTCATTTTCGACGTATCGCTGTC
AGGATCTTAGAAAAATTTCATATGTATGGACTTCGAGGCAGGAACTTG----TATCTTCTTGCAAATGTGGGCATCATGT
ACATCAATTTGGTCACTATCACATTACAATTTACAACCAAGACAAGGTACCACTATTTCTCCCA-AGTAAGCAACCGGAT
TAGCTTGCAAATTCCCATGGATTTCTTTAGGTCCAGATGGCCTATAAAATAGGTAAATTAGAGAAGGAGGGAGGGCAGGG
GATAGCTTAAATCAGCTGATGGAAGAAGGCATCAAAGAAGCAGAGTCGAGCAAGAAAGCAGCAGCAGCAGCAGCCGAGGG
CACCGGGACCAAAGTGGGCGTCATGGCCGACTCCACGTTAGGGAGCATCGGCGACGTGCTCAAGCTGCTGCCGACGTCGA
CGGTGATCGTGTACGAGGTGCTCAACCCAATCGTGACTAACGCCGGCGCGTGCAGCGTCGCCAACAGGGTGGTCACCGCG
GTGCTCCTCGTGCTCTGCGCCTTCTCCTGCGCCTTCTCGGCCTTCACCGACAGCTTCGTCGGTGCCGACGGCAAGGTCAG
GTACGGCCTCGTGACGCCCAGGGGCCTCCTGCCGTTCGGCGGCAGCGACGACGACGACACCGGGGTAAGAGACTTCTCCA
AGTACAAGCTGCGCCCGGCTGACTTCGCGCACGCCTTCTTCTCGGTGGTCGTGTTCGCGGCCGTGGCGCTGCTGGCCGAC
GCCAACACGGTGGCGTGCTTCTACCCGGCGCTCAGGGAGCAGCAGAAGCAGGTGGTCATGGCACTGCCCGTCGTGGTCGG
CGCCCTCGCGAGCGTCGTCTTCGTCGTGTTCCCCTCCAAGCGCCACTCGATCGGGTACCCTCCGGCGAAGCCTGCCGCGA
GCTCGCTGGCGTCGCAGTAGCTAGTCCGGCCGGTGATCTCGATGTATGCGCTCTCCCGCCGTGTGCCACGTGTTTGTGTT
TTGCGTGCGTACATA--TTTTTTTAGTCGAGTTTT---------------------------GTGTGCGTTTTTTGTTCA
GATGTGCCGTTCTCAAGTGGT-----GTTTTTGGTTCGTCGCGGGTCGCGGACAAGGCCCAAATGTAAAAAAAAAA--TC
GATTTTCTTAACACAGTACAAAAGTAAGTTCAATTCTGTTCATTCGGAAAAAAAGTTCAATTCTGTTCCCTTTTCTTGGT
TTTA-------TTTTTTCAAAAAGACAACCGAAGGGCA-CTTCGGTATGATAAATTTTATTAAAGGAAAACAGTAGCCAG
GAAAGATAAAAGGACACAAACGAT--------------------CAGCAAAAAATCATATTGATCAATGATCATCTTCTT
CTTTTGATTGTACATCGTCCGTCGAAATTTGAAAATTGCAGTGA----ACC----GTAAGGAAAAGCCCGCAAACTTCCT
TAACATATTAAGCTTTGAAGACCGAAAAATGAAGAAAGAATCCCATTGCTAGATTGGACTTATTTTAATATGAAATTCCA
TGTCATTTTCTTTCAAAATGAATAA----AATACAAGTGACTTTAGATAATAATTCATGTGAGTAATGACAAGAACTCTT
CTACTTCTTCGATATATTCCAATTTAAAGAAATGGAACAAGCCATTCATTGTTAGAAAATAAGATCTAAAAACCACCGAA
GAAAAAACGGTTAGGGCATCACCCTATGTAGTTCATGCTTGCTATCTTTCAGTACTATCATAGAAGGTTGGAGAAATCGA
ACCATGCTGCATAACAAATCGAAAGAAGATGCTGAAATCATAGCACCAAGAGCCAGACAACTCTTTCCCTTGATTTGACA
CACTAAATGTTTAAATCTAAAGAAAACTAGCAAATCGG---ACATCTACCCTCG--------------------------
------TCAAGATACCGAGAGACCAAAGAGACCTTATTTCAGTGTGTCATTGCTGCCACCATCAGGCCGATGCCGCAAGA
CGGCTAGAGAAAGAAAAATGTAA
>SNPs
--------S---------S-----------S-S------------------S----------------------------
S--------------------------S-------S--------------------------S---S-------------
--S-S---------------SSS----------------------------------S--S----S---S----------
---S----------------------------------------------------------------------------
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----------------------------S---------------------------------------------------
----------------S-----------S---------------------------------------------------
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---S-------------------S-----------------------------------S--------------S-----
--S----------S----------------------------------------------S--S----------------
---S----------------------------------------------------------------------------
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---------------------------------------------------------------S----------------
----------------------------------------------------------S---------------------
-S------------------------S--------------------S--------------------------------
----------------------------------------------------------S------------------S--
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-----------------------------------------------------------------S--------------
---------------------------S----------------------------------------------------
----------------------------------------------------------------------------S---
-S---S--------------------------------------------------------S-------S---------
----------------------------------------------------------------------------S---
------S--------------------------------S----------------------------------------
S---------S--------------------------S-----S------------------S-----------------
---------S----------------------S-S------S-----------------------------S--S--S--
------------------S--S----S-------------S---SSSS-------S------------------------
-S---------------------------------------------------S---S-------------------S--
--------S-----------S----SSSS-----------S--S----S-----------S---S----S----------
------------------S------------------S------------------------------------------
------------------------S---S-------------------S-------------------------------
-----------------------------------------------------------------S--------------
-----------------SS----------S--------------------------------------------------
----------------------------------------------------------------S-------S-------
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>forward_52
--------------------------------AGCTTGATGCCCATCCTTCC----------------------------
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>reverse_1757
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----------------------------------------------------------------------------CGTT
TCGCGGGCGTACATAT----------------------------------------------------------------
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