>input_sequence_73271
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----ACCAAACTCACCCACCTCTTCCCCCGCC---------------------------------CTCTGGAGCACAAGT
CCGAGCTAGCTAGAAGAAGCCTCCGTCTCCAACCAT----------ATACCATGGCGGCATCGGTGGCCTGCGCCTTCTT
CTTCGACGCCGAGCCGGTGGGCGAGCCCGGCATGCCGGCGCTGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGCG
ACAGCGACGTCTTCATGTACAGAGGGGACACGCCCTTCTGCAGCGAGGAGTGCCGCCACGAGCAGATGCACCTCGACGCT
GTCTGCGCCAGGCAGGCCGCCCGGAGGCTGCAGCGGTTCACGGCGGAGGCGGAGTGCCACCGTGGGCAGCGGCAGTCCAG
GAAGGTGTCCATCGCGAGCTAGCCGGC--CGGCCCCGGAAAGT-ATTGTTTGGATCCAAAATATCTGGAT----TCTGAA
GAAAACAACATCTG---TATTCTGAAGAACCATCGATG------TCTCTTGGGAGGCGTTGTCTGATGTCTC--CCTCTC
CGGCCGGTGCTCTAGC-T----------------------------------TTGGCGCCGCCTACGAGAGG--------
-----CAGGGCAGCATCAGGCGGCACGAAGCAC---AGGTGCCTGTAGC-TTCCCGCAT-GTGTCCATGACAAGCTAATT
AAGCTGCCCGGATGGGAGTAAAT-TGTAC--------TTG-TTCAG----------------------------------
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>chr2D_1_TraesCS2D01G453700
TGCACCCCCTTGTTCCGAGACCTGCACGGCGACTCTGACGACGAGACCAGCTGGC----AGCTTCTCGGTTAAACAACGC
--ATCCTTCTCCCCAAAGTTTTCAG----------C--GTACTAGGAGTGGATCTCAAGTGTTG-----------TGTGT
GTGACAAGGTGGTTCGTTTTGATTGA----GCAGACAAGAA----CTTCACGCGTGCCAAGCTCCCAATGTCTTGGTTTC
CTTTTCCCAGTGTCTTGGCTACTGTACACAAGGTGCGACCTGGCGCCGTGGCGCGCATGCACCGGCACAGCCCCAAAGAT
TCCCGGATGGAGCA-CCGGCGGGTGAAAAGGAAACGGCATCAAACTCTT------------TTCTGGTTTTCTTTTCGTT
TTATTTCTTTTCTGAAAAGGGCACGAATCATAGTAGTGCTACCAGGTGCGTGTATGTGCATTTGCTGTAGCTTGTCATTA
GCGTGGCTAAACCATGTGCGGTGTCTCCGTGCCTGTCGCTTGCGCTTGTTTGTTCTAGTGCTGGAACCCTAATTATCGAC
ACCAAGACGTTCAAGTTACTTTAATCCA------------------------------AAACTACGAGAGTAGATTTGAC
GCCCTCGTTCCCGACAAGTGGCACAGGGATACATGGAGGCTTCACGCTTGTGCGGTAATTATTGACGCCAATGCTTGCAC
TTATCCACAGCGTTCTTCTGCAGGAAAAAGCGGAGCAATTGCTCGTAGTATTTCATGTGTCCTAATCGATCGC-CTGTTT
TTCTCTAGGTCGACATGGACACTCTGCAGAGACGCCTCGAGTCCTCTCCGTTTGTCGGGACCACCCCGTCCACGTCAAGC
ATAACTCCGCCCTTGTCGTTCTCGTCGCGGTGGCCCACGCTAGCCATCGAGCCAACCACCGCAATACACCCGGGCATGCC
GGA-------------------------CTTCGTCCATGGTTA------------CCGCGCACCGGACCATGGTTTGCAG
GCCGCCAGTGCACCAATAATGGCCATCCCGTGCTCCGCTC------CCCCCATATATACCCGGCCTCCCGCTTCGCACCG
CTGCACCAAACTCACCCACCTCTTCCCCCGCC---------------------------------CTCTGGAGCACAAGT
CCGAGCTAGCTAGAAGAAGCCTCCGTCTCCAACCAT----------ATACCATGGCGGCATCGGTGGCCTGCGCCTTCTT
CTTCGACGCCGAGCCGGTGGGCGAGCCCGGCATGCCGGCGCTGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGCG
ACAGCGACGTCTTCATGTACAGAGGGGACACGCCCTTCTGCAGCGAGGAGTGCCGCCACGAGCAGATGCACCTCGACGCT
GTCTGCGCCAGGCAGGCCGCCCGGAGGCTGCAGCGGTTCACGGCGGAGGCGGAGTGCCACCGTGGGCAGCGGCAGTCCAG
GAAGGTGTCCATCGCGAGCTAGCCGGC--CGGCCCCGGAAAGT-ATTGTTTGGATCCAAAATATCTGGAT----TCTGAA
GAAAACAACATCTG---TATTCTGAAGAACCATCGATG------TCTCTTGGGAGGCGTTGTCTGATGTCTC--CCTCTC
CGGCCGGTGCTCTAGC-T----------------------------------TTGGCGCCGCCTACGAGAGG--------
-----CAGGGCAGCATCAGGCGGCACGAAGCAC---AGGTGCCTGTAGC-TTCCCGCAT-GTGTCCATGACAAGCTAATT
AAGCTGCCCGGATGGGAGTAAAT-TGTAC--------TTG-TTCAGTTGTTCTCGGTCGATCTGTCA-----TGTGCCGA
TGAA---TTATTTGATTAGAAATGAAAACAGAAAAGTAAACACCATGGATCTGAAGAGAGCAATCAGACATGATTCACAA
TTTGTTTATCC---------------------------------------------------------------------
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--------------TCAATTTGGGTCGCATGTCTGCCCACTCTGTTTGGTTTTG-TCCCCTAAATGATTGGATCCTGTTT
GGTTTTGTCCTTTTGCGTGCACACTGTG----------------------------------------------------
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-----------------CTATAGAGCACTGTCACTGTAAACAGTTCATGGCAATGAAAAAGAACTAACTTCAACCGGTCA
ACCCAAACAGA---------------------------------------------------------------------
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------------------------------------------------------------TAGATGATTTGTGTT-TTTT
TATCCGTTTGGATTGCCAAACAAAAATTGCGACGTTGGCGGAAGAGATGAGGCA--------ATG--------GAGAACA
GTCGGCGCACGGGGATGCCGAAGAGCGCAGCAACGATGGAGGACGACGACGAGCAAAGGTGGTGGAGAT----GTGTGTG
------ACGGTCGCAATGGCAGATAGGCCGAGGAACACCTTGGCGATGGCGGCAAGAGCAAAGTGGCCGGGGGGTCGGGG
CGTGAGAGGAGAAAAGGGTCGAATTAAAATTGAGAAACCGCCAAATGGACTATATGTGTTGTCGAAGTGGT---------
---------------------------GACACTAAGGGCCCACCACTTTTGTTTCTGCATTTTTGGTTCAAAATAACATC
CAAACAAGGACGGAAAAGTTTGAATCTTTTACTAGGTTTAAAATACACACCGTTGCAAAGTTCATGCTTAAATTCGGCCA
CTTTTTGAGTTTATTTGCTATTTTCAAAGCATTAACCAATTTTTCTTCATGATAGTGGTGAATGCCTCTGGACGGTAACC
TTCTTGTGTTCATGAATGGTAACCCACCCTGGGCTATGGTTGAGATGGTGGATATTTTTTTCCCTTCTTCTATGGTTGAT
GCAGAGATGAAAATATTGCCCTCTTTTAGATTGGTAATACTGAAGCCTTGCCTCATGTGAGCCCTCTCCAAAGTCGCTAA
ACCAAGGACTTTTCTGTTTTAATCTTTTCGTGAGATCCC
>chr2B_1
TGCATCCCCTTGTTCCGAGACCTGCACGGCGACTCTGACGACGAGACCAGCTGGC----AGCTTCTCGGTTAAACAACTC
--ATCCTTCTCCCCAAAGCTTTCAGCGTAGGAGTAC--GTACTAGGAGTGGATCTCAAGTGTTG-----------TGTGT
G--ATAAGGTGGTTCG-TTTGATTGA----GCAGACAACAAACAACTTTACACGTG------------------------
------CCAGTGTCTTGGCTACTGTGCACAAGGTGCGACCTGGCGC--------GCATGCACCGGCACAGCCACAAAGAT
GCCCGGATGGAGCACCCGACTATTGAAAAAGAAGTGGCATCGAACTCTT------------TTCTGGTTTTCTTTTGGTT
TTATTTCTTTCATGAAAAGGACACGAATCATGATAGTACTACCAGGTGCGTGA----GCATTTGCTGTCGCTTGTCATTA
GCGTGGCTAAACCATGTGCGGTGTCTCCGCGCCTGTCCCTTGCGTTTGTTTGTTGTGCTGCTGGAACCCTAATTATCGAC
ACCAAGACGTTCAAGTTACTTTAAGCAGACCCCGCAAAAAAAAAGTTACTTTAAGCAGAAGCT---AGAGTAAATTCGAC
GCCCTCGTTCCCGACAAGTGGCGCAGTCGCCGCAGCGG-----ATCCTTGTGCGGTAATTATTGACGCCAATGCTTGCTC
TTATCTACAGAGTTCTTCTGCAGGAAAAAGCGGAGCAATTGCTCGT---ATTTCCTGC--CCCGATCGATCGCTCTGGTT
TTCTCTAGGTCGACATGGACACTCTACAGAGACTCCTCGAGCCCTCTCCGTTTGTCGGGACCAGCCCGTCCACGTCACGC
GTAACTCCGCCCTTGTCGTTCTCGTCCCCGTGGCCCACGTTAGCCATCGAGCCAACAACCGCAGTACACCCGGCCATGCT
GGA-------------------------CTTCGTCCATGGTTA-------------------------------------
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>chr2A_1
TGCAC-CCCTTGCTCCGGAACGTGCACGGCGGCCCCGGCGATGAGACCAGCTGGCCTGCAGCTTCTCTCGGT------GC
--ATCCTTCTCCCCAAAGTTTTCAGCGTA------CTAGTACTAGGAGTGGATCTCAAGTGTTGAAAAAGTGTCGTGTGT
G--ACAAGGTGGTTCG-TTTGATTGATTGAGCAGACAAGAA----CTTTACGCGTGCCGAGCTC----------------
------CCAGTGTCTCGGCTACTGTGCACAAGGTGCGACCTGGCGA--------GCATGCACCTGCACAGCCCCACAGAT
TCCCCGATGGAGCACCCGACTGTTGAAAAAGAAGTGGCATCCAACTCTT------------TTCTGGTTTTATTT-----
------CTTTTCTTTTCTTTTTAAT-----------------------CGTGA----GCATTCGCTGTCCCTTGTCATTA
GCGTGGCTAAACCATGTGCGGTGTCTCCGTGCCTGTCATTTGCATTTGTTTGTTCTAGCGCTGGAACCCTAATTATCGAC
ACCAAGACGTTGAAGTTACTCTAATCCA------------------------------AAGCT---AGAGTAGATTTGAC
GCCCTCGTTCCCGACAAGTGGCACG---------GCGG-----ACGCTTGTGCGGTAACTATTGACGCCAATGCTTGCTC
TTATCCACAGCGTTCTTCTGCAGGGAAAAGCGGAGCAATTGCTCGTAGTACTTCCTGT--CCCGATCGATCGC-CTGTTT
TTCTCTAGGTCGACATGGACACTCTACAGAGACTCCTCGAGCCCTCTCCGTTCGTCGGGACCACGCCGTCGACGTCAAGC
ATAACTCCGCCGTTGTCGTTCTCGTCGCGGTGGCCCACGGTAAGCATCGAACCAACCACCGCAGTACACCCGAGCATGCC
GGAATATACAAGTCCAACCACGGTTTCCCTTCGTCCATGGTTAGATCGACCCATACCGCGCACCGGACCATGGTTTCCCA
G--------GCACCAATAATGGCCTTCCGGTCATCCGGTGCTCCCTCCCCCATATATACCGGCTCTCCAGCTTCGCACCG
CTGCACCAAACTCACCCATCTCTTTCCCCCGCCAAGAGCAGCAACGAGCTGTGTGTTCTTGCTAGCTCTGAAGCTCAAGC
GCGAGCTTGCTAGAAGAAGCATCTCTCCCCAGTCTGCCATATAGCAGTACCATGGCGGCATCGGTGGCCTGCGCCTTCTT
CTTCGACGCCGAGCCGGTGGGCGAGCCCGGCATGCCGGCGCTGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGTG
ACAGCGACGTCTTCATGTACAGAGGGGACACGCCCTTCTGCAGCGAGGAGTGCCGCCACGAGCAGATGCACCTCGACGCC
GTCTCCGCCAGGCAGGCCGCCCGGAGGGTGCAGCGGTTCTCCGCGGAGGCGGAGTGCCACCGTGGGCAGCGGCAGTCCAG
GAAGGTGTCCATCGCCAGCTAGCCG----------CGGAAAGTCTTTGTTTGGATCGACAAGATCTGAATGAATTCTGAA
GAAAACGACCTCTG---TATTCTGAAGAACCATCGATG------TCTCTTGGGAGGCGT---CTGATGTTTCCGTCTCTC
CGG---------------------------GTACCAGATG--------CAGCCTGGCGCCGCCTACGAGAGGCAAGGCAG
CCAGGCAGGGCAGCATCAGGCGGCACCAAGCATCATAGGAGACTGTAGCTTTCCCCCAT-GTGTCCATGGCAAGCTAATT
AAGCTGCCCGGATAGGAGGAAAT-TCTAC--------TTG-TTC--------TTGATCGATCTGTGC-----TGTGCCGA
TGAAGTGTTATTTGATTAGAAATGAAAACAGAAAAGTAAACACCATGGATCTGAAGAGAGCAATCAGACTTGATTCCCAA
TTTGTTTATCT---------------------------------------------------------------------
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--------------TCAATTTGGGTCGCATGTCTGCCCACTCTCTTATTTCTTA--CCCCTAAATGATTGGATCCTGTTT
GGTTTTGTCCTTTTGCGTGCACACTGTG----------------------------------------------------
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-----------------CTATAGAGCACTGTCACTGTAAACACTTCATGGCAATCGGTAAGGACTAACTCCAACCGGCAA
ACCTAAACGTATACTCCCTCCGGTCCTAAAAATTTGACTTTTTACTGTTTTCAAATGGACTACCATGTACGGATATATAT
AGACATATTTTAAAGTGCAGATTTACTCATTTTGCTACGTAAGTTGTCAATTATTAAAATATCTAGAAAGACAAATACTT
CCTCCTACCCAAATTTTTGTTTCTTATATTTGTCTAAATACAAATGTATCTAATTAAGTTTTAGTTTTATATATATTCGT
ATCTAGACAAATCTAAGATAAGAATTTTGGAACGGATGTAGTATTTAGGAACGGAGGGAGTACATGATTTGTCAGTTTTC
A--CCCTTTGGATTTG------AGTATCGCGACGGTGGCGG--------AGCAG--------ATGAGGCGATGGAGAGCG
GTCGGCGCACGGGGATGCCAACGAGGGCAACGACGATGGACGACGACGACGTGCAAAGGTGTTGGAGAGGATGGTGCGTG
------ATGGTCGCAACGGCGGAGAGGCCAAGGAACACCTTGGCGATGGCCGCGAGAGCGGTGTAGCCGGCGGTTGGGG-
CGC--GAGGAGAAAGGGGAAGAATTAAAATTGAGAAACCGCCAAATGGACTATGCGTGTTGTTGAAGTGGCGGGTGCTGC
CCGCTGCAATGTTTAGCTGTGGCAGGCGACATTGAGGGTCCGCCACTTTTGTTTCCACATTTTTGGTTCAAAATAACATC
CAAACAAGGACGAAGTAGGTTCAATCTTTTACTAGCTTTTAAGTACACACCATTGCAAGTTTCATGCTTAAATTCG-CCA
CTTTTTGAGTTGATTTGCT-------------------------------------------------------------
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---------------------------------------
>chr2B_39
--------------------------------------CGATGAGACCAGCTGGC----AGCTCCTCGGTTAAACAACCC
GGATCCTTCTCCCCAAAGTTTTCAGCGTA------C--GTACTAGGAGTGGATCTC-----------AAGTGTCGTGTGT
G--ACAAGGTGGTTCG-TTTGATTGA----GCAGACAAGAA----CTTTACGCGTGCCAAACTC----------------
------CCAGTGTTGTGTTGTCTCA----------------GGCGA--------GCATGCACCTGCACAACCCCAAAGAT
TCCCGGATGGAGCACCCGACTAATGGAAAAGAAGTGGCATCGAACTCTTTTTCTGACTTTCTTTTGGTTTTATTT-----
------CTTTTCTGAAAAGGACACGAATCATAATAGTACTACCAGGTGCGTGT----GCATTTGCTGTCGCTTGTCATTA
GCGTGGCTAAACCATGTGCGGTGTCTCCGTGCATGTCCCTTGCGTTTGTTTGTTCTAGTGCTAGAACCCTAATTATCGAC
ACCAAGACGTTGAAGTTACTTTAATCCA------------------------------AAGCTACCAGAGTAGATTCGAC
GCCCTCGTTCCCGACAAGTGGCGC---------AGCGG-----ATCCTTGTGCGGTAATTATTGACGCCAATGCTTGCAC
TTATCCACAGCGTTCTTCTGCAGGAAAAAGCGGAGCAATTGCTCGTAGTATTTCCTGT--CCTAATCGATCGC-CTCTTT
TTCTCTAGGTCGACATGGACACTCTACAGAGACACCTCGAGCCCTCTCCGTTTGTCGGGACCAGCCCGTCCACGTCACGC
GTAACTCTGCCCTTGTCGTTCTCGTCGCGGTGGCCAACGTTAACCATCG-GCCAACCACCGCAATACA-CCGGGCATGCC
GGA-------------------------CTTCGTCCATGGTTAGC----CCCATACCGCGCACCGGACCATGGTTTGCAG
CCCGCCAGTGCACCAATAATGGCTTTCCCGTGCTCCGTGC------CCCCAATATATACCCGCCCTCCCGCATCGCACCG
CTGCACCAAACTCACCCACCTTCGCCCATT------------------------------------TCTGAAGCTCAAGC
GCGAGCCTGCCACAAGGAGCATCTCTCCCCA----GCCATATAGCGATACCATGGCGGCATCGGTGACCTGCGCCTTCTT
CTTCGACGCCGAGCTGCTCGCCGAGCCCGGCATGCCGGCGATGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGCG
ACAGCGACGTCTTCATGTACAGAGGGGACACGCCCTTCTGCAGCGAGGAGTGCCGGCACGAGCAGATGCACCTCGACGCC
GTGGGCGCCAGGCAGGCCGCCCGGCGGCTGCAGAGGTTCACGGCGGAGGCGGAGTGCCACCGTGGGCAGAGGCACTCCAG
GAAGGTGTCCATCGCGAGCTAGCCGGC--CGGCCGCGGAAAGT-ATTGTTTCGATCCACAAGATCTGAAT----TCTGAA
GAAAACAGCAGCTG---TATTTTGAA----------------------------------------TGTCTCTGTCCCTC
CGGCCGGTGCTCTTGC-TGAACCAGAGGAGGCATCAGATG--------CACCTTGGCGCTGCCTACGGAAGGCCG-----
---GGCAGGGCGGCATCAGGCGGCACGAAGCAT---ATGTGCCTGTAGA-TTTCCCTCACGTTTCCATGGCAAGCTAATT
AAGCTGCCCGGATGGGATGAAAT-TGTAC--------TTG-TTC--------TCGGTCGGTGTGTGC-----TGTGCAGA
TGAATT---ATTTGATTAGAAATGAAAACAAAAAAGTAAACACCATGGATCTGAAGAGAGCAACCAGACATGATTCACAA
TTTGTTTATCTTCAATTTGAACACCATGGATCTGAAGAGAGCAACCAGACATGATTCACAATTTGTTTATCTTCAATTTG
AACACCATGGATCTGAAGAGAGCAACCAGACATGATTCACAATTTGTTTATCTTCAATTGAACACCATGGATCTGAAGAG
AGCAACCAGACATGATTCACAATTTGTTTATCTTCAATTTGAACACCATGGATCTGAAGAGAGCAACCAGACATGATTCA
CAATTTGTTTATCTTCAATTTGGGTCGCATGTCAGCCCACTCTCTTATCTCA--TTCCCCTAAATGATTGGATCCTGTTT
GGTTTTGTCATTTTGCGTGCACACCTATAGAGCGGGAAAATATCATGTACTCCAGTGCATTGGGTGCTCCGGCTACTCCC
TATGCATTTCAGCCATCTGATACAAAATACATGGACAGGATGGGACCTGATAGCCCCCGCACTTCGAATTTTGCACAGAA
CGCCCCAGGAAAGCACATAACAGTACTAATGTCCCTGTTACTTGGCTATGCTGTGCCCAGATTGGAATAGCAAGAACACG
AACAGACTTGGGCTGTAGGGCATCGAGGGTCCGGCGGCGGGTCGCCGGAGGCTGCGCTGCGACATCGGTAGAACAAGCTC
GCCGCAGTATGGTGCTCCGACGTCCAGCCGACAACTTATCCCACCCCTGCCCCGCCCTTCTCCGCCTCGGCGAATCCCTC
CGCAGCCCCACACACCAGGCGCCTAGCTCCGCCATCCGCCGGCGCCGGAGAAGAGGACTCCCAGCCTTCAGCTAAGCTTT
TGGGTGTTACGAATTTGTGTTATTATTGTGTATTTTAGATCTGATACATTTTCCCCTTCATGCTGATTTCGTGAGTTGTA
ACCAATCCTATTTTGAGTAGAATATGTTGGTATTTCTCTGTATCGTGGCGCGGCGAAGTTAATCACTGAAATTTCTATAT
TTGTCTTATACTACATATTCTAGCAATTATGTATAGTAAAATTTCAGCAACTTATGGCCTGACAGTCTACATGATTACAA
AGTAATTTTATCTACATTGTTCAAGTCCTGAATGAAGTGGTTGTTCGCACAATACTTGCTTGAAGGCACCAGACTTAAAT
TCATTAATACTTGCAATATGTTACTACAGGTGTGAAAAAATGGCATTACATTTCGACAGGCTTAACTTTTTTGGTGCTAT
CGACTTGGAAATTCCATGACACTTTCTGTACCATATTTATATGTGATGGATGAAGTTGAAAGCTTCTAGGAGCTCCTCTG
TGTTTCAGTGTGGAGTTTAAGGTGTTTTTTTACAGGTTTAAGTATTTTGGTGCTTTAGGACAACCAAATAGTGCCTTACC
AGCAGCCAGTTATAATTTTCAGTTTGATGTTGCACACACTCCTGGTCATATTGGGGTTGAGTTTTGGAATCATTTAGACT
GGAAAGCCAACAAAGGAGCTGCTGAAAAATGCTGGATATTATGCATAAAGCTAATTTTATGAAGTGTCATGCTGATGCAA
AGCTTTGTACATTAAGTTCCTTTATAAAACATTTATCTCTGTGTACACTGGAACATGTCTTTTCATTTGTTTGGATAAGT
GAGCGCACATCCTGGACAGAAATTACACATTCAGTTCAGGTTGATACTCCTAGCATACAAATCACTGGCGTGTTTTTCAG
AAAATGCTTGGAAATGAAACCTGTCCCAGAGATGCTACATTAGGGCGTTTTCTACTAAATAGAAACATGTCGATAGTCCA
GGGCTCCAGGCACATCTGAGCCGCCGGAACCTCCATCGCATAGTACAGCAGCGGCGTTCATTCTGTTCCAAACGGGAAGC
AGCACATCTTGTGAACAAAGCTTTACAGCTATTTTGTACTTGCATGGGGTCCTTTTGGCAAAATTCGAAAGGTGGGGAGT
TCCAGTTCCATCCTGTCCCCATATTTTGCATCTAGCGGCTCTGGTGTGTACGGAGCAGCCGGAGTACCCAGTTCACGGGA
GTACAAGATATTTTCCCCTATAGAGTACTGTCACTATAAACAGTTCATGGCAATTGGTAAGGTCTAACTCCAACCGGCCA
ACCCAAACAGA---------------------------------------------------------------------
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------------------------------------------------------------TACATGATTTGTCGGATTTT
CATCCCTTTGGGTCCG------AATATTGCGACGGTGGCGG--------AGGCG--------ATG--------GAGAGCG
GTCCGCGCACGGGGATGCCGACGAGGGCAACGATGTAGGAGGACGACGACGTGCAAAGGTGTTGGAGAGGATGGCGCGTG
------ACGGTCACAACGGCGGAGAGGCCAAGGAACACCTTGGCGACGGCGGCAAGAGCGGTGTGGCCGGCGGTTGGGA-
CGCGAGAGGAGAAAGAGGATGAATTAAAATTGAGAAACCGCCAAATGGACTATGTGTGTTGTCGAAGTGG----------
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>chr2D_1075
ACCA----------------------------------------------------------------------------
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----------------------------------AT----------ATACCATGGCGCCATCAGTGGCCTGCTCCTTCTT
CTTCGACGACGAGCTGCTCGGCGAGCCTGGCATGCCGGCGATGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGCG
ACCATGACGTCTTCATGTACAGAGGGGACACGCCCTACTGCAGCGAGGAGTGCCGCCACGAGCAGATGCACCTCGACGCC
GTCTGTGCCAAGAAGGCCGCACGGAGACAGCAGCGGTTCTCGGCGGGGACGGAGTCCCACCGTGTGCAGCGGCAGTCCAG
GAAGGTGTCGGTCGCAAGCTAACCGGC--TGGCCGCTGAAAGT-TTTGTTTGGATCAAGAAGATCTGAAT----TCTGAA
GAATACAACATATG---TATTCTGAAGAACCATCCATATCTCTTTCTCTTGGGAGGCGT---CTGATGTCTCCGTCTCTC
CGGCCGGTGCTCTAGCGTGTACC------------------------------CTGGC----------------------
-GCC-----GCATCAGGT------------GGT---AGGTGCCTGTAGC-TTCCCATAT-GTGTCCATGGCATGCTAATT
AAGCTGCCCGGATGGGAGGAAATCTGTAC--------TTG-TTC--------TCGGTCTGTCTGTGC-----TGTACCGA
TGAATTGATTTTGTTC---GAAACGAAA----------------------------------------------------
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>chr2B_1075
ACCA----------------------------------------------------------------------------
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----------------------------------AT----------ATACCATGGAGCCATCAGTGGCCTGCTCCTTCTT
CTTCGACGCCGAGCTGCTCGGTGAGCCCGGCATGCCGACGATGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGCG
ACAGCGACGTCTTCATGTACAGAGGAGACACGCCCTACTGCAGCGAGGAGTGCCGCCACGAGCAGATGCACCTCGACGCC
GTCTGCGCCAGGCAGGCCGCGCGGAGGCTGCAGCGGTTCTCGGCGGAGACGGAATCCCACCGTGAGCAGCGGCAGTCCAG
GAAGGTGTCCGTCGCAAGCTAACCGGC--TGGCCGCTGAATGT-TTTGTATGGATCGACAAGATCCGAAT----TCAGAA
GAATAGAGCGTCTG---TATTATGAAGAATCATCGTC------------------------------GTCTCCGTCTCTC
CGGCCTGTGCTCTAGCCTGGACCGGTGGAGGCACCAGATGCAGCTTGCCAGCTTGGCCTCGCCTACGGAAGGCAAGGCAG
GGCA-----GCAGCATCAGGCGGCACCAAGCAT---AGGTGCCTGTAGC-TTCCA------TGTCCATGGCAAGCTATTT
AGGCTGTCCGGGTGGGACGAAAT-TTTAC--------CTGATTC--------TTGGTCGGTCTGTGA-----TGTGCCGA
TGAATTTACC--TGGTTCGGAACGAAATGG--------AAGACCATGGATCTGAAGAAAGCAACCGAACATGATTCTCAT
TTTTTTTTCCT---------------------------------------------------------------------
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>chr2A_1075
ACCA----------------------------------------------------------------------------
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----------------------------------AT----------ATACCATGGCGCCATCACTGGCCTGCTCCTTCTT
CTTCGACGACGAGCTGCTCGGCGAGCCCGGCATGCCGGCGATGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGCG
ACAGCGACGTCTTCATGTACAGAGGGGACACGCCCTACTGCAGCGAGGAGTGCCGCCACGAGCAGATGCACCTCGACGCC
GTCTGCGCCAAGCAGGCCGCGCGGAGGCAGCAGCGGTTCTCGGCGGAGACGGAGTCCCACCGTGGGCAGCGGCAGTCCAG
GAAGGTGTCGGTCGCAAGCTAACCGGC--TGGCCGCTGAAAGT-TTTGTTTGGATCAAGAAGATCTGAAT----TCTGAA
GAATACAACATATGTAGTATTCTGAAGAACCATCCATATCTCTTTCTCTTGGGAGGCGT---CTGATGTCTCCGCCTCTC
CGGCCGGTGCTCTAGCATGGACCGGTCGAGGTAGCAGATG--------CACCTCTGGC----------------------
-GCC-----GCATCAGGT------------CGT---AGGTGACCGTAGC-TTCCCATAT-GTGTCCATGGCATGCTAATT
AAGCTACCCGGATGGGAGGAAATCTGTAC--------TTG-TTC--------TCGGTCTGTCTATGC-----TGTGCCGA
TGAATTTG-ATTTGATTCGAAACGAAATGG------------CCAAGGATCTCAAGAAAGCAATCAAACATGATGCAGGT
TTTGTTTTAAC---------------------------------------------------------------------
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--------TTCTACTGTATTTGGGTCGCTCTTCTGCGCCTCCTCTCTTGTTTTGTTTCCCTTAATGATTGGATCCTGTTT
GGTTTTG-------------------------------------------------------------------------
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-GTAATGCTAGGGACACTGTTCAA--------------------------------------------------------
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-----------------------AGCACTGTCACTGTAAAAACATCATGGCAAT--------------------------
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>chr2D_1081
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-----------------------------------------------TACCATGGCGCCATCAGTGGCCTGCTCCTTCTT
CTTCGACGACGAGCTGCTCGGCGAGCCCAGCACGCCGGCGATGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGCG
ACCATGACGTCTTCATGTACAGAGGGGACACGCCCTACTGCAGCGAGGAGTGCCGCCACGAGCAGATGCACCTCGACGCC
GTCTGTGCCAAGCAGGCCGCACGGAGACAGCAGCGGTTCTCGGCGGGGACGGAGTCCCACCGTGTGCAGCGGCAGTCCAG
GAAGGTGTCGGTCGCAAGCTAACCGGC--TGGCCGCTGAAAGT-TTTGTTTGGATCAAGAAGATCTGAAT----TCTGAA
GAATACAACATATG---TATTCTGAAGAACCATCCATATCTCTTTCTCTTGGGAGGCGT---CTGATGTCTCCGTCTCTC
CGGCCGGTGCTCTAGCGTGTACC------------------------------CTGGC----------------------
-GCC-----GCATCAGGT------------GGT---AGGTGCCTGTAGC-TTCCCATAT-GTGTCCATGGCATGCTAATT
AAGCTGCCCGGATGGGAGGAAATCTGTAC--------TTG-TTC--------TCGGTCTGTCTGTGC-----TGTGCCGA
CGAATTGATTTAGTTC---AAACGAAATGG------------CCAAGGATATGAAGAAAGCAATCAAACATGATGCAAGT
TTTGTTTTAAC---------------------------------------------------------------------
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--------TTCTACTGTATTTGGGTCGCTCTTCTGCGCCTCCTCTCTCGTTTTGTTTCCCTTAATTATTGGATCCTGTTT
GGTTTTG-------------------------------------------------------------------------
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-GTAATGCCAGGGACACTGTTCAA--------------------------------------------------------
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-----------------------AGCACTGTCACTGTAAAAACATCATGCCAAT--------------------------
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>chr2D_1081
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-----------------------------------------------TACCATGGCGCCATCAGTGGCCTGCTCCTTCTT
CTTCGACAACGAGCTGCTCGGCGAGCCCGGCATGCCGGCGATGGACGCGTGCGCGCTCTGCGCCAAGCCGCTGGCGCGCG
ACAGCGACGTCTTCATGTACAGAGGGGACACGCCCTACTGCAGCGAGCAGTGCCGCCACGAGCAGATGCACCTCGACGCC
GTCTGCGCCAAGCAGGCCGCGCGGAGGCAGCAGCGGTTCTCGGTGGGGGCGGAGTCTCACCGTGGGCAGCGGCAGTCCAG
CAAGGTGTCCGTCGCGAGCTAAGAGCGCGTGGCCGAGGAAAGT-TATGCGTGGATGGACAAGATCTGAAT----TCTGAA
GAAAATAGCATCTG---TATTCTGAAGAACCGTCGATACTTTCTGGTTG-----GGCGT---CTGATGCCTCCGTTTCTC
CGGCCGGTGCAATTGCCTGAACCGGAGGAGGTCTCAGATG--------CGCCTTGGCGCCACCTACCGGAGGCAGGGCAG
GGCA-----GCATCAGAT------------GGT---CGGTGCCTGTAGC-TTCCCACAT-GTGTCCATGCCAAGCTGATT
GAGCTGCCCGGATGGGAGGAAAT-TGTAC--------TTGGTTC--------TCGGTCGGCCTGTGCTGCGCTGTGCCCA
TGAATT---TTTTTGTTAGAAACGAATTCAGAAAAAAAAA----ATGGATCTGAAGATAGCAATCAAACATCATTCACAT
TT-GTTTAGCT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCAGTTCGGGTAGCTCGTCTGCTCCATCTCT-----------------------------------
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---------------------------------------
>chr2B_1613
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----------GATGGGAGCAAAT-TGTACTTGTTCAGTTC-TTC--------TCGGTCGATCTGTGC-----TGTGCCGA
TGAATT---ATTTGATTAGAAATTAAAACATAAAAGTAAACACCATGGATCTGAAGAGAGCAATCAGACATGATTCACAA
TTTGTTTATCT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCACTTTGGGTCGCATGTCTGCCCACTTTGTTTGGTTTTGTCA-CCTAAATGATTGGATCTTGTTT
GGTTTTGTCCTTTTGCGTGCACACTGTG----------------------------------------------------
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-----------------CTATAGAGCACTGTCACTGTAAACAGTTCATGGCAATCGGTAGCGGCTAACTCCAACCGGTCA
ACCCAAACAGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TACATGATTTGTCGGGTTTT
CATCCCTTTGGGTTCG------AACATTGTGACGGTGGCGG--------AGGAGATGAGGCAATG--------GAGAGCG
GTCGGCGCACAAGGATGCCGACAAGGGCAACATTGGTGGAGGACGGCGATGTGCAAAGGTGTTGGAGAGGATGGCGCATG
ATCAACATAGTCGCAACAACGGA------GAGGAACACCTTGGCGATGGCGGCAAGAGCAATGTGGCCGGCGGTTGGGG-
CGCGAGAGGAGAAAGGGGTCAATTTAAAACTGAGACATCGCCAAATGCACTTTGTGTGTTGTCGAAGTG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-SS-------------S-------------------------------S---------------SSSSSSSSSSSSSSSS
SSSSSS-------------------S--------------------SSSSSSSS--------------------------
------------------S-S-S------S---SS------S----------------------------------S---
--------------------S-----------S----S---------------SSSS-----------S-----------
-------------------------------------S------S-----------------------------------
------------------------------------------------------------S----S--------------
--------------------------SSSSSSSS-SS-SSSSS-------------------------------------
------------------------------------------------------S---SS--------------------
-------------------------S-------S-------S--------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
------------------------S------------S------------------------S-----------------
-----------------------------SS---------------------------------------S---S----S
S------S------------S--SS--S---SS-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
----------------------------------S-----------------------S--S-----S------------
-----------------------------------------------------------SSS------------------
--------------------------------------------------------------------------------
--------------------------------S----------------------S-------------S----------
------------------S-------------------------SSSSSSSS-------------S--------------
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------------------------------------------------------SSSS---S-------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S---------SSS-----
S----S--------SSSSSSSS--S---------S------SSSSSSSS----S-----------------------S-S
---------------------S---S---S---------------------S---------S------S-------S---
----------------S---S--S-------------------------------------S--------S--S-S---S
--S-----------S--------------------------------------S----------------S---------
-------------------------------S-S----S--S-------------SS-----------------------
------------S-SS--S--S-------------S---S--S--------S------SS----------------S---
-----------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_455
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-----------------------------------GTGCTACCAGGTGCGTGTAT-------------------------
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>reverse_4581
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--------------------AGATAGGCCGAGGAACACCT----------------------------------------
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---------------------------------------
