>input_sequence_73202
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----------------------ATGCCGGCCACGCC--------------------------------------------
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---------------------------------------------------------------CCCATCGGTTTCTCCTC
CGACGAGTCCTACTCCACCTC------C------TACTCTCTCCCCGAGCCCTTCTCCTACCCCGGTCTATCCCAGC---
---CCCACTCCCACCACACCCGCGCCCCCACC------GGCTTCTACCTCTACCCAGCCTCCACCTGCCACTGGGC----
---TCAAGGTCGGCTACTACAATGACAAGTGCCCTGACGCGGAGAAGATCGTGCTGGACGCCGTGCGCAACGCCACCGCC
GGCGTGAAGGCCGGGCTCATCCGTCTCTTCTTCCACGACTGCTTTGTCCAGGTACACATACATTCAGACGCAAGTGAAGT
TTGAGAGAT--TGATATACGCCTATAGTTGTGCACTGCACGATTGAGAAGCTAACTATGGTATCGTT-------------
-----------------GCTTTCAGGGTTGTGATGCCTCTGTCCTCCTGAACAAGGTCGTTGGCAAGCCTGAACCGGAGA
TGCTTGGTATCCCAAACTTGAGCCTGCGTGGCTTCGAAGTGATAGAGGCGGCCAAGAAGAAGATCGAGGAAAAATGTCCT
GGTGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCAGGCCGTGACGCCAGCAAGTTACTCAGCGGCTACAAAATAAACTT
CAGCATGCCGGCCGGCCGCTATGACGG-----------------ATGA--------------------------------
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>chr2A_1_TraesCS2A01G148300
AACACGGTCCACATACAGACGCACCGACAGAGAAACTGAATTTGAGTTTATATATCTGGCAAGCTGTTGTATGTCAGCCT
GTGTTATT----CTAC--TAGCTAGCTTGCAAATGAAATCAGAGCTCTACTTGTAGTAATA-TAATA--AACAAAACAGG
GATATCTCAACTTCTACTCTACGCAGTTTATTATAAGTAGAA---TACATTTTTTTGCCGCACAAGTAGGA------GGG
ATACATAATGATCAAAAAAATTGCAGTTGCACCACTCGTTTGTCAGCTACGAGCACATGATAACTGCGAACATTTTCGAC
GTCAAATTTAGTTACGCGAGGATGATAACTTTAGTTGGCAAATATGATAACTTCATATTT-------CAGTTTATTTTTA
CCAGAAACTTACCATGTGTCGCTAAAATTGGAATTGCCATAGAAAAACGTCAGCGCCGAAGTAACACGCACCTGATCATG
TG-------GACTTATCATTTGGGTCGTAATATT-CAGCCGGGTTGATTTGCTTAGCTGCCAGACGTATATATGCAATGG
-ATCATGGCCACGTAATCGCTACGAAGCTTACTGCCGCTGCCACCGCGTCACGCGTATCATCAACTTTGCAGTGTGGCCA
CCACGTTGCCGGCCGGCCGGCAGCTGGTTGAC----TCACAAACGTGCGCTCCAAACGCTAC-------------CATGC
ATGCGATTTCTCCTG----TACGTGACTATAAATACAGATGCGAAACAACAGGTTTTCTTCATTCTATCT------TCCC
TCGATCGAGCAAGAGTAGCTGACACGAGCAGAGGAAGATGGCCAAGCTTGCCCTTCTCGCCGTGCTCGCCGTACTCGGTT
CCGTGGCTTGCCAAGGATCCGACTACGGCTACACCTATCCCAAGCCCGACCCCACTCCCATCATACCCTCGCCCCCACCA
CCGGCGACTCCTTCGTCGAG-CCTTCCCCATCTCCACCAGTTACTCCTCTGCCCAGCCCTAGCCCTGGCTCTACCCCGGG
CTATCCCACCCCCACTCCCACCATGCCGGCCACGCC--------------------------------------------
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---------------------------------------------------------------CCCATCGGTTTCTCCTC
CGACGAGTCCTACTCCACCTC------C------TACTCTCTCCCCGAGCCCTTCTCCTACCCCGGTCTATCCCAGC---
---CCCACTCCCACCACACCCGCGCCCCCACC------GGCTTCTACCTCTACCCAGCCTCCACCTGCCACTGGGC----
---TCAAGGTCGGCTACTACAATGACAAGTGCCCTGACGCGGAGAAGATCGTGCTGGACGCCGTGCGCAACGCCACCGCC
GGCGTGAAGGCCGGGCTCATCCGTCTCTTCTTCCACGACTGCTTTGTCCAGGTACACATACATTCAGACGCAAGTGAAGT
TTGAGAGAT--TGATATACGCCTATAGTTGTGCACTGCACGATTGAGAAGCTAACTATGGTATCGTT-------------
-----------------GCTTTCAGGGTTGTGATGCCTCTGTCCTCCTGAACAAGGTCGTTGGCAAGCCTGAACCGGAGA
TGCTTGGTATCCCAAACTTGAGCCTGCGTGGCTTCGAAGTGATAGAGGCGGCCAAGAAGAAGATCGAGGAAAAATGTCCT
GGTGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCAGGCCGTGACGCCAGCAAGTTACTCAGCGGCTACAAAATAAACTT
CAGCATGCCGGCCGGCCGCTATGACGG-----------------ATGAGACCCTCCCGAACCTTCCCCCACCTTTCGCCA
ACCTGACTATCCTCACACAAATATTCGCCAAGAAGGGACTCAGCCAAAATGTC--GGTTGCACTTTCCGGCGCGCACAGC
ATCGGCCGCTCCCACTGCTCCTCCTTCCGTGACCGTCTCCAGCCGCCGGCCAACGACAACTCCACCACATCGATGGACGC
CACCTACGCTGGGAAGCTGACTCAGGACTGCCCTGCCGGTAGTGATCCAACGGTGCCGCAGGACTACAAGACCCCCGACG
TGCTGGACAGCCAGTACTACAGGAACGTGATGGATCGCAAAGTGCTCTTCACCTCCGACGCAACGCTCATGACGTCACCA
AAGACCAAGGAATTGGTGGAAAAGTACACTTGGTGGTTGATCGGAGATTTCTTGTGGTACAGACATTTCGAGGATGCCAT
GGTGAAAATGGGCAATATTGAGGTGAAGAACAGCACCAACGGCCAGATCAGGAAGAAGTGCGGGTTCGTGAACGAGCCCT
-ACACCGGTTGATGATCTCTCAAGGGTGGAGACTATATATTCAGCCGTGGTTTTTGCGTGTGCCTTCTGATCTTCC----
ATTCTAGTTTA----TTTTCCACTAAGGTTTTC-GCTCGTCGGTTCATTTTATTCATTTGTGTTGTAATCTTTGTTGTGC
CACTTAGCCAACTACGTACGGGCAATGCTTTTCACTGGGATTGATGAA----T---TAATTTTTTCTGATAATCATTATT
TATCAATGGCAATATATATCTTCTCTGCTGTAACATCCTTAGGTATGCATTATCCCTTCATGCAAAGGCACGATGCTCAG
CCTAGAGTGTGTATGGTCAACCCATCCTGACTGGATGCAAACACTCCTTTTCTTTTGAGGGAGGGTAACAACAATTCTAC
TAAGTGCTCTATCAAAATCAGTTCGTATGAAGGACCCCTACTTCTTACTCCTAAGCCAGCACCTGTCTGGTTCCTCCCTT
TTCAGTTTTTTACATCTGGCATATTTT
>chr2A_1
AACACAGTCCACACACAGACACACCGGTAGAGGAACTGAATTTGAGTTTATATATCCGGCAACCTGTTGTATGTCAGCCT
GTGTATGTTATCCTACTATAGCTAGCTTGCAAATGAAATTAGTGTTCTATTTGTAGTAGTAGTAATC--AACGAAACAGG
GATATCTCAACT---------CGTAGTTTATTACAAGTAGGCGGTTTTTTCTTCTTGCAGCACAAGTAGGAA------GG
ATACATAATGATGAAAAAAGTTGCAGTTGCACCACTCATTCGTCAGGTACGAGCACATGACAACTCCGAACATTTTCAAC
GTTAAATTTAGTTACACGACGATGACAACTTTAGTT---AAGCATGGCAACTTCGTGCTT-------CAGTTTATTTTTT
ACAGAAACTTACCATGTGTCATTGAAATTGAATTTCCTATCAAAAAACGTCAGCGCCGGAGTAACACGCACCTGATCATG
TG-------GACTTATCATTTGGGCCGTAATATG-CAGCCGGGTTGATTTGCTTAGCTGCCAGACGCATATATGCAATCG
-ATCATGGCCACGTAGTCGCTACCAAGCTTACT-----------------------------------------------
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>chr2A_67
------------------------------------------------------------------TTTTATGTCAGCCT
GTGT--GTTATCCTAC--TAGCTAGCTTGCAAATGAAATCAGGGTTCTACTTGTAGTAGTAGTATAATAAACAAAACAGG
GATACTCA--------------------------------------ACTTCTTCTGGGCGCACAATTAGGAGGCACAGGG
ATATATAATGATGAAAAAA-TTGCAGCCGCACCACTCGTTCGTCAGGT----------GATAACCTCAAACGTTTTCTAT
GACAAGCTTAGTTACGCGAGGATGACAATTTTAATTGGTAAGAATGACAACTTCGTGGTTCATGCTGCAGTTCATTTTTG
ACATAAACTTACAATGTGTCACTGAAATTAAAATTACCATAAAAAAACGTCAACACCGGAGTGCCACACACTTGATG-TG
TG-------GACTTATCATTTGGGTCGTAATATACCGGCCAGGTTGATTTGCTAACGTGCC-GACGCATATATGCAATCG
-ATCATGGCTGCGTAGTCGCTATCAATCTTCGTGCCGCTGCCACCGCGTCACACATATCATCAACTT-GCAGTGTGGTCA
GCACGTTTGG----GGCCGGCAGCTGG-TTGACTCATCACAAACGTGCTCTCCAAACGCCCGGATTACA------CATGC
ATGCGATTTCCCCCG----TGA--GATTATAAATACGCATGCGGAACAGCCAGTTTTCTTCATCCCATCT------TCCC
TCGATCGAGCAAGAGTAGTTGACCTGAGCAGAGGAAGATGGCAAAGCTCGCCCTTCTCGCCGTGCTCGCGGTGCTCGGTT
CCGTGGCCTGCCAAGCATCCGGCTACAGCGACACATATCCCAA------CCCCACTCCCATCATA---------------
---------------------------------CCACCGGCTACTCCTCCGCCCAGCCCTAGCCCTGGCCCTACCCCGGG
CTATCCCTCCCTCACTCCCACCGTGCCGGCCAGGCC--------------------------------------------
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---------------------------------------------------------------CCCACCGGTTTCTCCTC
TGACGAGCCCTACCCCACCTC------C------TACTCTCCCGCCGAGCCCTCCTCCTACCCCGGTCTATCCCACC---
---CCCACTGCCACCACGCCCGCGCCCCCACCCCCACCGGCTTCTACCCCTACC--------------------------
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--------------------------------CCGTCTCCAGCCGCCAGCCAAGGACAACTCCACCACGTCGATGGACGC
CACGTACGCTGGAAAGCTGACCCAGGACTGCCCCGCCGGTAGTGATCCCACGGTGCCGCAAGACTACAAGACCCCCGACG
TGTTGGACAATCAGTACTACAGGAACGTGATGGATCGCAAAGCGCTCTTCACCTCCGACGCGGCGCTCATGACGTCACCA
AAGACCAAGGAGTTGGTGGAAAAGTACACTTGGTGGTTGATCGGAGATTTCTTGTGGTACAGACATTTCGAGGATGCCAT
GGTGAAGATGGGTAATATCGAGGTGAAGAACAGCACCAACGGCCAGATCAGGAAGAAGTGCGGGTTCGTGAACGAGCCCT
-ACACCGGTTGATGATCTCTCAAGGGTGGAGACTACATATTCAGTCGTGCTTTTTGGGTTTGCCTTTTGAT-CTTC----
CTTAATTTCTAGTCTCTTTTCACTAA-GTTTTTAGCTTGTTGGTTCATTTCCTTCATTTGTGCTGTAATCCTTGTTGGGC
TACT-AGCCAACTACGTACGGGCAGTACTTTTCATTGAGATTGATGAA----T---TAGTTTTT-CTGTTAGTTATTATT
TATCAAATGCAATATATATCTTCTCTGCTGTAACATCCTTAGGTATGTGTTATCCCTTCATGCAAAGG------------
--------------------------------------------------------------------------------
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---------------------------
>chrUn_90
--------------------------------------------------------------------------------
-------------TAC--TAGCTAGCTTGCAAAGGAAATTAGGGTTCTACTTGTAGTAGTAGTATAA--AACAAAACAGG
GATATCTCAACTTCTACTGTACGTAGTTTATTACAAGTAGGA---TTTTTTTTTTTGCTGCACAAGTAGGAGGCACAGGG
ATATATAATGATGAAAAAAATTGCAGTTGCACCACTCGTTCGTTAGGTACGAGGACATGGCAATTCTGAATGTTTTAGAT
GACAAGTTTAGTTAGGCGAGGATGACAACTTTAATACGCAAGCATGGCAACTTCATGCTT-------CAGTTTATTTTTG
ACATAAACTTACCATGTGTCACTGAAATTGGAATTGCCATTGAAAAACGTCAGCACTGGAGTGCCACACACCTTTTTTAC
CTGATGTATGACTTATCATTTGGGTCGTAATATACCGGCCGGGTTGATTTGCTTACCTGCC-GACGCATATATGCAATCG
-ATCATGCCTGCGTAGTCGCTACCAATGTTGGTGCCGCTGCCACCGCGTCACATATATCATCAACTT-GCTTTGTGGTCA
CCACGTTCCCGGCCGGCCGGCAGCTGGTTTGACTCATCACAAACGTGCGCTCCAAACGGCCGGAATACACACATGCATGC
CTGCGATTTCCCCCGTAATTGA--GACTATAAATACGCATGCGGAACAGCAAGTTTTCCTCATCCCATCT------TCCC
TCGATCGAACAGGAGTA-TTGACCCGAGCAGAGGAAGATGGCCAAGCTTGCCCTTCTCGCCGTGCTCGCGCTGCTCGGTT
CCGTGGCCAGTCAAGCATCCGGCTACGGCTACACCTATCCCAA------CCCCACTCCCATCATACCACCGCCCCCACC-
--GGCTACTCCTCCGCCGAGCCCTTCCCCACCTCCACCGGCTACTCCTCCGCCCAGCCCTACCCCTGGCCCTACACCGGG
CTATCCTAGCCCAACTCCCACCACGCCGGCCACGCC--------------------------------------------
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---------------------------------------------------------------CCCACCGGTTTCTTCTC
CGACGAGCCCTACCCCACCTC------CACCGGCTACCCTCCCACCGAGCCCTACTCCTACCCCAGGCTATCCCACCACC
AGTCCTACTCCCACCACGGCCTCGCCCCCACC------GTCTTCTACCCCTACCCCGCCTCCACCTGCCACCGGGC----
---TCAAGGTCGGCTACTACGATGACAAGTGCCCTGACGCGGAGAAGATCGTGCTGGACGCCGTGCGCAACGCCACCGCC
GGCGTGAAGGCCGGGCTCATCCGCCTCTTCTTTCACGACTGCTTTGTCCAGGTACACATACATACATACGCAAGTGAAGT
TTTAGAGATTGATATACGCC----TAGTTGTGCACTCCACGACTGAGAAGCCAACTATGGTATCGTTGCATGCATGCATT
TATGTTACTTGGGCGTGCTTTTCAGGGTTGCGATGCCTCTGTCCTGCTGAACAATGTCTCTGGCAAGCCTGAACCGGAGA
TGCTCGGTATCCCAAACTTGAGCCTGCGTGGCTTCGAAGTGATAGAGGCGGCCAAGAAGAAGATCGAGGAAAAATGTCCG
GGTGTCGTCTCCTGCGCCGACATCGTTGCCTTCGCAGGCCGTGACGCCAGCAAGTTACTCAGCGGCTACAAAATAAACTT
CAACATGCCGGCCGGCCGCTACGACGGATTGGTGTCCCTCAAAGACAAGACCCTCCCCAACCTGCCCCCACCCTTCGCCA
ACCTCACTACCCTCACACAAATGTTCGCCAAGAAGGGACTCAGCCAAACCGACATGGTTGCGCTTTCCGGCGCGCACAGC
ATCGGCCGCTCGCACTGCTCCTCCTTCCGCGACCGTCTCCAGCCACCGGCCAACGACAACTCCACCACGTCGATGGATGC
CACTTACGCTGGGAAGCTGACCCAGGACTGCCCCGCCGGGAATGATCCCACGGTGCCGCAGGACTACAAGACCCCCGACG
TGCTGGACAGCCAGTACTACAGGGACGTGATGGATCGCAAAGTGCTCTTCACCTCCGACGCGACGCTCATGACGTCACCA
GAGACCAAGGAGCTGGTGGAAAAGTACACTTGGTGGTGGATCGGAGATTTCTTGTGGTACAGACATTTCGAGGATGCCAT
GGTGAAGATGGGCAATATCGAGGTGAAGAACAACACCAACGGCCAGATCAGGAAGAAGTGCGGGTTTGTCAACGAGCCCT
-ACACCGGTTGATGATCTCTTGGACGGCAGAGACTGTTCAGT--TCATGCTTTTTGAGTGTGCCTTCTGGT-TTCC----
TTTCTAGTGTA----TTTTCCACTAAGCTTTTT-CCTCGCTGGTTCATTTCATTCATTTGTGTTGTAATCCTTATTATGC
CACT-ACTGTCAAC--TACCGGCAATACTTTATATTGAGAGTGATAAA----T---CATTTTT---TGTTTAGCATTATT
TA------------------------------------------------------------------------------
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>chr2D_483
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-----------------------------------CAGCCGGATTGATTTCCTTACCTGCC-GACGCATATATGCAATCG
-ATCATGGCCACGGAGTCGCTATCAAGCTTAGTGCCGC----------------GTATCATCGACTT-GCTGTGTGGTCA
CCACGTTCCCGGCCGGGCGGCAGCTGG-TTGACTCATCACAAACGTGCGCTCCAAACGGCCGGAGTACA------CATGC
ATGCGAGTTCCCCCGTGATCGA--GACTATAAATACGCATGCGGAACAGCAAGTTTTCTTCATCCCATCA------TCCC
TCGATCGAGCAAGAGTAGCTACCCCGAGCAGTGGAAGATGGCCAAGCTTGCCCTTCTCGCCGTGCTGGTCGTGCTCGGTT
CCGTAGCCTGCCAAGCATCCGGCTACGGCTACAGCTATCCCAA------C---ACTCCCATCATACCACCGCCCCCACC-
--GGCTACTCCTCCGCCGAGCCCTTCCCCACCTCCACCGGCTACTCCTCCGCCCAGCCCTACCCCTGGCCCTACACCGGG
CTATCCTAGCCCAACTCCCA---------CCACTCC--------------------------------------------
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---------------------------------------------------------------CCCACCGGTTTCTTCTC
CGACGAGCCCTAACCCACCTCCACCGGC------TACTCTCCCACCGAGCCCTACTCCTACCCCGGGGTATCCCACC---
---CCCACTCCCACCATGCCGGCGCCCCCACC------GGCTTCCACCCCTGCCCCGCCTCCACCTGCCACTGGGC----
---TCAAGGTCGGCTACTACAATGACAAGTGCCCTGACGCCGAGAAGATCGTGCTGGACGCCGTGCGCAACGCCACCGCC
GGCATCAAGGCCGGGCTCATCCGCCTCTTCTTTCACGACTGCTTTGTCCAGGTACATACA--------------------
-GGATTGAT--ATATAGGCC----TAGTTGTGCACTGCAGGATTGAGAAGCTAACAAT----------------------
--------TTGGGCGTGGCTTTCAGGGTTGCGATGCCTCTGTCCTGCTGAACAAGGTCGCTGGCAAGCCGGATCCGGAGA
TGCTCGGTATCCCAAACTTGAGCCTGCGTGGCTTCGAAGTGATAGACGCGGCCAAGAAGAAGATCGAGGAAAAATGTCCG
GGTGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCAGGCCGTGACGCCAGCAAGATACTCAGCGGCAACAAAATAAACTT
CAGCATGCCAGCCGGCCGCTACGACGGGTCCGTGTCCCTAAAAGATGAGACCCTCCCCAACCTGCCACCACCCTTCGCCA
ACCTCAAAACCCTCACACAAATGTTCGCCACGAAGGGACTCAGCCAAACCGACATGGTTGCGCTTTCCGGCGCGCACAGC
ATCGGCCGCTCGCAGTGCTCCTCCTTCCGTGACCGTCTCCAGCCGCCGGCCAACGACAACTCCACCACGTCGATGGACGC
CACGTACGCTGGGAAGCTGACCCAGGACTGTCCCGCCGGCAGTGATCCCACGGTGCCGCAGGACTACAAGACCCCCGACG
TGCTGGACAGCCAGTACTACAGGAACGTGAAGGATCGCAAAGTGCTCTTCACCTCCGACGCAGCGCTCATGACGTCACCA
AAGACCAAGGAATTGGTGGAGAAGTACACTTGGTGGTTGATCGGAGATTTCTTGTGGTACAGACATTTCGAGGATGCCAT
GGTGAAGATGGGCAATATCGAGGTGAAGAACAGCACCAACGGCCAGATCAGGAAGAAGTGCGGGTTCGTCAACGAGCCCT
AACACCGGTTGATCATCTCTCCAGGGTGGAGACTATCTATTCAGTCGTGCTTTTTGGGTGTGCCATTCCGTCTTCCTTAA
TTTCTAGTTTA----CTTTTCACTAAGGTTTTTTGCTTGTCGGTTCATTTCCTTCATTTGTGCTATAGTCCTTGTTGTGC
CAC-TAGCCAACTACGTAACGGCAATACTTTTCACTGAGATTGAGGAATTATT---T--TTTTTTCTGTTAATCATTATT
TATCAATGGCAATATATATCTTCTCTGCTGTAACATCCTTAGGTATGCGTTATCCCTTCATGCAAAGACACGATACTCAG
CCTAGAGTGTGTATGGTCAACC----------------------------------------------------------
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---------------------------
>chr2D_487
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---------------------------------------CGGGGTGATATCATTACCTACC-GACACATATATTCAATCA
AATCATGGCCACGTAGTCGCTACCAAGCTTACTGCCGCTGCCACCGCGTCAGGCATATCAAGAACTT-GCAGGGTGGTCA
CCACGTTCAG----TGCAGGCAGC--G-TTGACTCATCACAAACGTGCGCTCCAAACGGCCGGAGTACA------CATGC
ATGCGATTTCCCCCGTGATCGA--GACTATAAATACGCATGCGGAACAGCAAGTTTTCTTCATCCCATCGTGGACGTCCC
TCGATCGAGCAAGAGTAGCTACCCCGAGCAGAGGAAGATGGCCAAGCTTGCCCTTCTCGCCGTGCTGGTCGTGCTCGGTT
CCGTGGCCTGCCAAGCATCCGGCTACGGCTACAGCTATCCCAA------C---ACTCCCATCATACCACCGCCCCCACC-
--GGCTACTCCTCCGCCCAGCCCTTCCCCACCTCCACCGGCTACTCCTCCGCCCAGCCCTACCCCTGGCCCTACACCGGG
CTATCCTAGCCCAACTCCCA---------CCACGCC--------------------------------------------
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---------------------------------------------------------------CCCACCGGTTTCTTCTC
CGACGAGCCCTACTTCACCTCCACCGGC------TACACTCCCACCGAGCCCTGCTCCTACCCCGGGGTATCCCACC---
---CCCACTCCCACCACGCCGGCGCCCCCACC------GGCTTCCACCCCTGCCCCGCCTCCACCTGCCACTGGGC----
---TCAAGGTCGGCTACTACGACGACAAGTGCCCTGACGCCGAGAAGATCGTGCTGGACGCCGTGCGCAACGCCACCGCC
GGCATCAAGGCCGGGCTCATCCGCCTCTTCTTCCACGACTGCTTTGTCCAGGTACACATACATACATACGCAAGTGAAGT
TGGATTGAT--ATATAGGCC----TAGTTGTGCACTGCAGGATTGAGAAGCTAACAAT----------------------
--------TTGGGCGTGGCTTTCAGGGTTGCGATGCCTCTGTCCTGCTGAACAAGGTCGCTGGCAAGCCGGATCCGGAGA
TGCTCGGTATCCCAAACTTGAGCCTGCGTGGCTTCGAAGTGATAGACGCGGCCAAGAAGAAGATCGAGGAAAAATGTCCG
GGTGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCAGGCCGTGACGCCAGCAAGATACTCAGCGGCAACAAAATAAACTT
CAGCATGCCAGCCGGCCGCTACGACGGGTCCGTGTCCCTCAAAGATGAGACCCTGCCCAACCTGCCACCACCCTTCGCCA
ACCTCAATACCCTCACACAAATGTTCGCCAAGAAGGGACTCAGCCAAACCGACATGGTTGCGCTTTCCGGCGCGCACAGC
ATCGGCCGCTCGCAGTGCTCCTCCTTCCGTGACCGTCTCCAGCCGCCGGCCAACGACAACTCCACCACGTCGATGGACAC
CACGTACGCTGGGAAGCTGACCCAGGACTGTCCCGCCGGCAGTGATCCCACGGTGCCGCAGGACTACAAGACCCCCGACG
TGCTGGACAGCCAGTACTACAGGAACGTGAAGGATCGCAAAGTGCTCTTCACCTCCGACGCAGCGCTCATGACGTCACCA
AAGACCAAGGAATTGGTGGAGAAGTACACTTGGTGGTTGATCGGAGATTTCTTGTGGTACAGACATTTCGAGGATGCCAT
GGTGAAGATGGGCAATATCGAGGTGAAGAGCAGCACCAACGGCCAGATCAGGAAGAAGTGCGGGTTCGTCAACGAGCCCT
-ACACCGGTTGATCATCTCTCCAGGGTGGAGACTATCTATTCAGTCGTGCTTTTTGGGTGTGCCATTCCGTCTTCCTTAA
TTTCTAGTTTA----CTTTTCACTAAGGTTTTTTGCTTGTTGGTTCATTTCCTTCATTTGTGCTATAGTCCTTGTTGTGC
CAC-TAGCCAACTACGTAACGGCAATACTTTTCACTGAGATTGAGGAA----T---T--TTTTTTCTGTTAATCATTATT
TATCAATGGCAATATATATCTTCTCTGCTGTGACATCCTTAGGTATGCGTTATCCCTTCATGCAAAG-CACGATACTCAG
CCTAGAGTGTGTATGGTCAACC----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr2D_487
--------------------------------------------------------------------------------
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---------------------------------------CGGGTTGATATCATTACCTACC-GACACATATATTCAATCA
AATCATGGCCACGTAGTCGCTACCAAGCTTACTGCCGCTGCCACCGCGTCAGGCATATCAAGAACTT-GCAGGGTGGTCA
CCACGTTCAG----TGCAGGCAGC--G-TTGACTCATCACAAACGTGCGCTCCAAACGGCCGGAGTACA------CATGC
ATGCGATTTCCCCCATGATCGA--GACTATAAATACGCATGCGGAACAGCAAGTTTTCTTCATCCCATCGTCGACGTCCC
TCGATCGAGCAAGAGTAGCTACCCCGAGCAGAGGAAGATGGCCAAGCTTGCCCTTCTCGCCGTGCTGGTCGTGCTCGGTT
CCGTGGCCTGCCAAGCATCCGGCTACGGCTACAGCTATCCCAA------C---ACTCCCATCATACCACCGCCCCCACC-
--GGCTACTCCTCCGCCGAGCCCTTCCCCACCTCCACCGGCTACTCCTCCGCCCAGCCCTACCCCTGGCCCTACACCGGG
CTATCCTAGCCCAACTCCCA---------CCACGCC--------------------------------------------
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---------------------------------------------------------------CCCACCGGTTTCTTCTC
CGACGAGCCCTACTTCACCTCCACCGGC------TACTCTCCCACCGAGCCCTGCTCCTACCCCGGGGTATCCCACC---
---CCCACTCCCACCACGCCGGCGCCCCCACC------GGCTTCCACCCCTGCCCCGCCTCCACCTGCCACTGGGC----
---TCAAGGTCGGCTACTACGACGACAAGTGCCCTGACGCCGAGAAGATCGTGCTGGACGCTGTGCGCAACGCCACCGCC
GGCATCAAGGCCGGGCTCATCCGCCTCTTCTTCCATGACTGCTTTGTCCAGGTACACATACATACATACGCAAGTGAAGT
TGGATTGAT--ATATAGGCC----TAGTTGTGCACTGCAGGATTGAGAAGCTAACAAT----------------------
--------TTGGGCGTGGCTTTCAGGGTTGCGATGCCTCTGTCCTGCTGAACAAGGTCGCTGGCAAGCCGGATCCGGAGA
TGCTCGGTATCCCAAACTTGAGCCTGCGTGGCTTCGAAGTGATAGACGCGGCCAAGAGGAAGATCGAGGAAAAATGTCCG
GGTGTCGTCTCCTGCGCCGACATCGTGGCCTTCGCAGGCCGTGACGCCAGCAAGATACTCAGCGGCAACAAAATAAACTT
CAGCATGCCAGCCGGCCGCTACGACGGGTCCGTGTCCCTAAAAGATGAGACCCTCCCCAACCTGCCACCACCCTTCGCCA
ACCTCAATACCCTCACACAAATGTTCGCCAAGAAGGGACTCACCCAAACCGACATGGTTGCGCTTTCCGGCGCGCACAGC
ATCGGCCGCTCGCAATGCTCCTCCTTCCGTGACCGTCTCCAGCCGCCGGCCAACGACAACTCCACCATGTCGATGGACGC
CACGTACGCTGGGAAGCTGACCCAGGACTGTCCCGCCGGCAGTGATCCCACGGTGCCGCAGGACTACAAGACCCCCGACG
TGTTGGACAGCCAGTACTACAGGAACATGAAGGATCGCAAAGTGCTCTTCACCTCCGACGCAGCGCTCATGACGTCACCA
AAGACCAAGGAATTGGTGGAGAAGTACACTTGGTGGTTGATCGGAGATTTCTTGTGGTACAGACATTTCGAGGATGCCAT
GGTGAAGATGGGCAATATCGAGGTGAAGAGCAGCACCAACGGCCAGATCAGGAAGAAGTGCGGGTTCGTCAACGAGCCCT
-ACACCGGTTGATCATCTCTCCAGGGTGGAGACTATCTATTCAGTCGTGCTTTTTGGGTGTGCCATTCCGTCTTCCTTAA
TTTCTAGTTTA----CTTTTCACTAAGGTTTTTTGCTTGTTGGTTCATTTCCTTCATTTGTGCTATAGTCCTTGTTGTGC
CAC-TAGCCAACTACGTAACGGCAATACTTTTCACTGAGAGTGAGGAA----TTGAT--TTTTTTCTGTTAATCATTATT
TATCAATGGCAATATATATCTTCTCTGCTGTAACATCCTTAGGTACGCGTTATCCCTTCATGCAAAGACACGATACTCAG
CCTAGAGTGTGTATGGTCAACC----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>chr2D_487
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------CGGGTTGATATCATTACCTACC-GATACATATATTCAATCA
AATCATGGCCACGTAGTCGCTACCAAGCTTAGTGCCGCTGCCACCGCGTCAGGCATATCAAGAACTT-GCAGGGTGGTCA
CCACGTTCAG----TGCAGGCAGC--G-TTGACTCATCACAAAAGTGCGCTCCAAACGGCCGGAGTACA------CATGC
ATGCGATTTCCCCCGTGATCGA--GACTATAAATACGCATGCGGAACAGCAAGTTTTCTTCATCCCATCG------CCCC
TCGATCGAACAAGAGTAGCTACCCCGAGCAGAGGAACATGGCCAAGCTTGCCCTTCTCGCCGTGCTGGTCGTGCTCGGTT
CCGTGGCCTGCCAAGCATCCGGCTACGGCTACAGCTATCCCAA------C---ACTCCCATCATACCACCGCCCCCACC-
--GGCTACTCCTCTGCCGAGCCCTTCCCCACCTCCACCGGCTACTCCTCCGCCCAGCCCTACCCCTGGCCGTACACCGGG
CTATCCTAGCCCAACTCCCA---------CCACGCCCCACTGGTAGAAAATAGGCCTTTAGTCCCGGTTCGCAATGGCCA
TTAATCCCAGCTGTGCAACCGGGACTAAATATGCGCGACTAAAGGCCCCCCTTTAGTCGCGCCTCTTACGAACTGCGACT
AAAGGTACGTCCACGTGGGCGCCAGGAGTCCGTCGGGGCGGAGGACCTTTAGTCCCGGTTCTCGTGGCTAACCGGGACTA
AAGGCCTCCTCCGCAGGTTTAGTTTCCTTTTCTGTATTTAATTATTTAGTGCAAACATTTTTAGTTTCCAGCACGGGCAC
GCACGGCGGCGCCGTTTCCGCACGCGCGCGAGGCTGGCAATGCGCGCATCCAGTACGCGGCGACGAGGAGGACGGCAGGC
GGCGGAGGACGGCAGGCGAGAAGGCGGGCGAGAAGACGAGGGCGAGAAGACGACGGCGGCGGTCCCCTCTTCTTCTAGGC
ACGCGAGGAGGACGGCAAGCGGCGGCGGGCACCTACCGGAGACGAGGGCGGCGCGGAGAAGACGAGGGCGGCGGCGCGGA
GAGGACGAGGGCGGCGCCGCGGAGAAGACGAGGTCCTGGATGCGTTTGGTCCTTAGCGCGGAGAAGACGAGGGCCGCGGA
GATTATATAGGGCAAGCCTTTAGTCGCGGTTGGTGTCCCCAACCGGGACTAATCCCCAACCGGGACTAAAGGGGTACCTT
TAGTCGCGGTTGGTGTCACGAACCGCGACTAAAGGTTTTTTCGCGCCGTTTTCGTTCCCGCGCGGAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATTTGAAAAT
CTTAAAAATAGAAATAATATATCAAAAAATTCAAAAAAATAAAACTAATTCATTTAAAATCTTAAAAATAGAAATAATAT
TATATCAAAAAATTCAAAAAAATAAAACTAATTCATTTGAAAATCTTAAAAATACAAATAATATATCAAAAAATTCAGAA
AAATAAAACTAATTCATTTGAAAATCTTAAAAATACAAATAATATATCAAAAAATTCAAAAAATAAAACTAATTCATTTG
AAAATCTTAAAGTGGCTAAGTGAAGTGAGCTGAGTCCTATATAGGGATGGGCCTTTAGTCCCGGTTGGCCTGGCCAACCG
CGACTAAAGGCCTTCGGGCCAGCCTGAGGACCTTTAGTCCCGGTTGGCCAGGCCAACCGGGACTAAAGCCCCTCCCGTCC
GCCAGCTGTCGACCGAGCGCATTGGGCCCAGATAGTTGGTCGCGGGTCTCCTCCCGAACCGCAACTAAAGACCCCTTTCG
TCGCGGTTCGATTATTTTGGGGACTAATGGGGGCGTATGGAAGCCTCTTTTTCTACTAGTGCCCCCACCGGTTTCTTCTC
CGACGAGCCCTACTTCACCTCCATCGGC------TACTCTCCCACCGAGCCCTGCTCCTACCCTGGGGTATCCCACC---
---CCCAGTCCCACCACGCCGGCGCCCCCACC------GGCTTCCACCCCTGCCCCGCCTCCACCTGCCACGGGCTCAAG
GAGTCAAGGTCGGCTACTACGACGACAAGTGCCCTGACGCCAAGAAGATCGTGCTGGACGCCGTGCGCAACGCCACCGCC
GGCATCAAGGCCGGGCTCATCCGCCTCTTCTTCCACGACTGCTTTGTCCAGGTACACATACATACATACGCAAGTGAAGT
TGGATTGAT--ATATAGGCC----TAGTTCTGCACTGCAGGATTGAGAAGCTAACAAT----------------------
--------TTGGGCGTGGTTTTCAGGGTTGCGATGCCTCTGTCC-GCTGAACAAGGTCGCTGGCAAGCCGGATCCGGAGA
TGCTC-GTATCCCAAACTTGAGCCTGCGTGGCTTCGAAGTGATAGACGCGACCAAGAAGAAGATCGAGGAAAAATGTCCG
GGTGTCGTCTCCTGCGCCGACATCGTCGCCTTCGCAGGCCGTGACGCCAGCAAGATACTCAGCGGCAACAAAATAAACTT
CAGCATGCCAGCCGGCCGCTACGACGGGTCCGTGTCCCTCAAAGATGAGACCCTCCCCAACCTGCCACCACCCTTCGCCA
ACCTCAATACCCTCACACAAATGTTCGCCAAGAAGGGACTCAGCCAAACCGAGATGGTTGCGCTTTCCGGCGCGCACAGC
ATCGGCCGCTCGCAGTGCTCCTCCTTCCGTCACCGTCACCAGCCGCCGGCCAACGACAACTCCACCACGTCGATGGACGC
CACGTACGCTGGGAAGCTGACCCAGGACTGTCCCGCCGGCAGTGATCCCACGGTGCCGCAGGACTACAAGACCCCCGATG
TGCTGGACAGCCAGTACTACAGGAACATGAAGGATCGCAAAGTGCTCTTCACCTCCGACGCAGCGCTCATGACATCACCA
AAGACCAAGGAATTGGTGGAGAAGTACACTTGGTGGTTGATTGGAGATTTCTTGTGGTACAGACATTTCGAGGATGCCAT
GGTGAATATGGGCAATATCGAGGTGAAGAGCAGCACGAACGGCCAGATCAGGAACAAGTGCGGGTTCGTCAACGAGCCCT
-ACACCGGTTGATCATCTCTCCAGGGTGGAGACTATCTATTCAGTCGTGCTTTTTGGGTGTGCCATTCTGTCTTCCTTAA
TTTCTAGTTTA----CTTTTCACTAAGGTTTTT-GCTTGTTGGTTCATTTCCTTCATTTGTGCTATAGTCCTTGTTGTGC
CAC-TAGCCAACTACGTAACGACAATACTTTTCACTGAGATTGAGG----ATT---T--TTTTTTCTGTTAATCATTATT
TATCAATGGCAATATATATCTTCTCTGCTGTTACATCCTTAGGTCTACGTTATCCCTTCATGCAAAGACACGATACTCAG
CCTAGAGTGTGTATGGTCAACC----------------------------------------------------------
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>chr2A_1387
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------------------CTTTCAGG---GCTATGCCTCTGTCCTGCTGAACAAGGTCGCCGGCAAGCCGGAACCGGAGA
TGCTCCGTATCCCAAACTTGAGCGAGCGTGGCTTCGAAGTGATAGAGGCAGCCAAGAAGAAGATCGAGGAAAGATGTCCG
GGTGTCGTCTCCTGCGCTGACATCCTCGCCTTTGCAGGCCGTGACGCCAGCAAGTTACTCAGCGGCTACAAAATAAACTT
CACCATGCCAGCCGGCTGTTACGACGGATTGTTGTCCCTCAAAGAGGAGACCCTCCCCAACCTGCCCCCACCCTTCACTA
ACCTCACTACCCTGACACAAATGTTCGCCAAGTAGGGACTCACCCAAACCTACATGGTTGCGCTTTCTGGCGTGCACAGC
ATCGGCCGCTCACACTGCTCCTCCTTCCGTGACCGTCTCCAGCCGCCGGCCAACGACAACTCCACCACTTCGATGGATGC
CACATACTCTAGGAAGCTGACCCAGGACTGCCCTGCCGGCAGTGATCCCACGGTGCCGCAGGACTACAAGACCCCCAACG
TGTTGGACAACCAGTACTACAGGAACATGATGGATCGCAGAGCGCTCTTCACCTCCGACGCAACGCTCATGACATCACCA
AAGACCAAGGAGTTGGTGAAAAAGTACACTTGGTGGTTGATCGGAGATTTCTTGTGGTACAAACATTTCGAGGATGCCAT
GGTGAAGATGGGCAATATCGAGGTGAAGAACAACACCAATGGCCAGATCAGGAAGAAGAGCGGGTTCGTCAACGAGCACT
-ACACCGGTTGATGTTCTCTCAAGGGTGGAGACTATATATTCAATCGTGCTTTTTGTGTGTGCCTTTCGGTTTTCA----
-----------------------------------CTCGTCGGTTCATTTCCTTCATTTGTGATGTAATCTTTGTTGTGC
CACTTAGCCAACTACGTACCGGCAATGCTTTTCATCGAGATTGATGAA----T---TAATTTTTTCTGATAATCATTATT
TATCAATGGCAATATATATCTCCTCTGCTGTAATATCCTTAGGTATGCATTATCCCTTCATGCAAAGGAACGATGCTCAG
CCTAGAGTGTGTATGGTCAACCGATTTTGACTGGATGCAACGACTCCTTTTCTTTTGAGGGAGGGTAATAGCAATTCTAC
TAAGTGCTCTATCAAAATCAGTTTGTATGAAGGCACCCTACTTCTTACTCCTAAGCCAACACCTGTCTGGTTCCTCCTTT
TTCAGTGTTTTACATCTGGCTTATTTT
>SNPs
-----S-------S------S-----SS----S-----------------------S-----S-----------------
----SSS-----------------------------------S-S-------------S---------------------
------------------S----S---------S------S-------S-------------------------------
------------S---------------------------S-----S------------------S--------------
-------------------------S---------------SS----S--------SS---------------------S
S-------------------S--S----------------------------------S---------------------
---------------------------------S--------------------------------S-----------S-
---------------S-------S-------------------------------------------S---------S--
-------S---------------------SSS---------------------------SSS------------------
----------S--S------SSSS------------SS-----S----S--S-----------S-S--------------
-----------------------S------------------------------------------------S-------
-------S-------S-----S---------------------SSSSSS------------------SS----------S
SS---S------S--S--------------S-------S-S--------S-------------------S----------
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-------------------------------------------------------------------S------------
-------S---------------------------------S-S---------S---------------------S----
-----------------S------------------------------S------S------------------------
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-----------------------S---------------------------------------S--S-------------
-----------SS---SS-SSSSS--------------------------------------------------------
------------------------------S--------------S-------------S--------------------
----S--------------------------------------------------------------------------S
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---------------------S-----------------------------------S-----S--------S-------
----S----S------------S-------------------------SS-S---------S------------------
-----------S--------------------------------------------------------S-----------
---S-----------------S--------------------------S-------------------------------
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------S-----------S-------------------------------------------------------------
--------------------------------------------S----S------S-----------------------
S-------------------------------S-----------------S-----------------------------
-------------------------------------S------------------------------------------
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----------------------S--SS-------------SS--------------------------S-S---------
-----------------------S---------SS-----------------------S------------------S--
------S-------------S------
>forward_929
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-----------------------------TACACCTATCCCAAGCCCGA-------------------------------
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>reverse_3623
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----------------------ATTCGCCAAGAAGGGACTCA--------------------------------------
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