>input_sequence_73056
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---------------------------------------------ATGCAGATCCAAGTCCGGTGCGGGTGCGGCGAGGC
GGCGTGCCCGGAGTGGGCGGTGGTGGAGGTGCAGGGCGTGCTGCAGCCGCAGCCCTGCTTCTCCGGCCGCATCCAGGGCC
TCCACATCGGCCGCCTCTGCTCCACCTCCTCCGCCCCGTCTTCCAAGGCAAGAACCACCAACCCTCCCTGCATACTTGGT
TTCTTGATTTGGTTTGGGGGATCTTCACGGCGGTCTTGCCATTGCCAGGGCGGGTACACCTTCACCGTGGGGTACCATGA
GCTCGCCGGCTCGAAGGTGACTCTCAAGAAGCCCCTTCTGGTGCTGAGGAAGAAGAAGAACGACAAGGGGAACCCCGGCG
AGCTCGGACAAGGTGGACAGGCGGCGGCGGCGGCGGAGGTGGAGCTGGAGGTGATTGGCATCATCCGGCACAAGATCCTC
TTCAAGGACCGCCCCAAGGCCCTCATCTCAAGTAATCACCGACCCAATTTCCATTTTCACCACAATTGCCAGCACGGTGT
CGGTGATTCGAAGTAGAAACTTTGCTGATGGTGTGTTTTT-CCGGTTTCCTCCTGCAGAGCCGGTGCCGAAGGAGAAGAA
GGCCATGCCGGAAGCGGCGACCCCATCAACCGTGCCTCCCGCTTCCTGA-------------------------------
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>chr5A_1_TraesCS5A01G178700
CGGCGCCAACTCCCACGCGGACCCCAACGCCGCCGCCAAGCCCGAGCGATGATGCCTCCATGACACCCAGCACTGAAGCC
ACGCCGACGCCGACCAGCCCGCGCACGCCGACTCCTCCGACTCCGGAGGTTGACACCACCATTTGATGCATTGCCGACGC
GTCCTTTCTTTTGCACGCCGAACTTTTTATTGATCGCCGAACTGTGGCAAGGTGATCGCCGATCGCCGAGACTTTTGTGG
CGCTGATCGCCGGACTTGTGGCGTTTTTTGGGTAGTGGGAATGGACCAAGTTTGAATTTACGACGCCTTGGGGGCGGCAC
CTGGGGGCGTGGCTGGAACCTAGATCGCCCCTAGGGCCTAAAAATCACCGGACGAGCGTCCGAAATAGTGTCGGCCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGTGGAATT
GCTCTAAAAGGCTCATCCTATACTAGTCTCCCCCGAGGGGGTGGGGGTGGGGAGGGTCCGTTGTTTCATCGTTGGAGCAA
GTGGGGCCGTATAAGCAAAGAAAATTATTTGGAAAAAAGGG-AAGCAAAAACAATTGGGGGTGTTTTGGCGCGAACCAAT
AGAAGCACGGGGAAATGAAAAGGGCGGGAAAGCAGCCCGCCAACATCCAGCACAAACCCTCGCCTCCTATCGATCTCTCT
CCTCC----CCTCTGTCCCCACATCCAATCCGAGGCGAGGCGGCGATGCAGATCCAAGTCCGGTGCGGGTGCGGCGAGGC
GGCGTGCCCGGAGTGGGCGGTGGTGGAGGTGCAGGGCGTGCTGCAGCCGCAGCCCTGCTTCTCCGGCCGCATCCAGGGCC
TCCACATCGGCCGCCTCTGCTCCACCTCCTCCGCCCCGTCTTCCAAGGCAAGAACCACCAACCCTCCCTGCATACTTGGT
TTCTTGATTTGGTTTGGGGGATCTTCACGGCGGTCTTGCCATTGCCAGGGCGGGTACACCTTCACCGTGGGGTACCATGA
GCTCGCCGGCTCGAAGGTGACTCTCAAGAAGCCCCTTCTGGTGCTGAGGAAGAAGAAGAACGACAAGGGGAACCCCGGCG
AGCTCGGACAAGGTGGACAGGCGGCGGCGGCGGCGGAGGTGGAGCTGGAGGTGATTGGCATCATCCGGCACAAGATCCTC
TTCAAGGACCGCCCCAAGGCCCTCATCTCAAGTAATCACCGACCCAATTTCCATTTTCACCACAATTGCCAGCACGGTGT
CGGTGATTCGAAGTAGAAACTTTGCTGATGGTGTGTTTTT-CCGGTTTCCTCCTGCAGAGCCGGTGCCGAAGGAGAAGAA
GGCCATGCCGGAAGCGGCGACCCCATCAACCGTGCCTCCCGCTTCCTGAAGAATCCTCTTTCTGAC--AAAATAAGTTTG
TTAAGGATCTGAAGCTCCCTGGGGGTTCTGATTGTGCCCGTTTGTTTCCCCTGTCTAGTTAGTGGTCACATCTTCCTCTG
CCATCGTTGTGCTTGTGCCGTACGTATACCAGTATGAATTTTCCGTCTCGTTGAAGCACACTAGTGACAAATTAGCACAA
ACTTGTGGGGCTGTTTGGGTCCA---CTGCTATGGGAACCAAATACCACCATCATATTTGCTTATATTCTTGTGGTGATC
AGGTTCATTTTGCATATCTCCTGACTTATGCATCTAGATGATACTCAAATGC----------------------------
--------------------------AGTATAATTTATCGTGTTTGAACTTTGAAGCATAAGATACGGTTAGCATCGAAG
CAATTAACCGTGACTAGAAAAAGAGATTAACAAGAAACACATAGACAGTAGCATGTAAGAACGAAAGTCCTCGTGGTGGT
GGTTAAGATCACACCGTATAACCCTGGCAGCCACTTGGTCATGTTTATGTCTCAGAGCAGCATCTTCAGATAAAGATGAC
AAACGCCAATGTTTTCTATCCAGTTCCAGCCAGTATAGATCATACTCCACACATGAAAGTGGAAATATTTCATACG----
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--------------TACTAGCGATGCCACGCACAGTGGACGCGACTAGGAAGACCAAATCTGCGGGAACATGTTAGTTGC
TAGGTCCAAATAATTAATAGAGGCCAGAATATGTGCCTTGAAAGCAGTGGTTTTATAACA-GGACACAAGACACATACTT
CACCATGAAAACTGGTTTAAAGGTATTTGAAGGACTAGAATCTCGGACGTCAAATCCGAACAATTAAGGCCTTAACGGAG
TTGCGGCGCCCATGTCGTCTTACACCCAAAAGC-TTTGGAGCTAGCCCCACCGTTGGGGGCACAGTCCGTTCCTCGTCGC
ATGTTTCAGGGAAGGTTGTCAAAAAGAGGCCAGAGACCACCCATGCTATGCAGTGGCGGCTGGACGAGGCTTGCCTGCTC
CCTCGAGG
>chr5D_769
GGGGGG--------------------------------------------------------------------------
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-----------------------------------------------------GAGTTCATTGTTTCATCGTTGGAGCAA
CCAGGGCAGTATAAGCAAAGAAAATCATTTGGAAAAAAAGG-AAGCAAAAACAATTGGGGGTGTTTTGGCGCGAACTAAT
AGAAGCACGGGGAAATGAAAAGGGCGGGAAAGCAGCCCGCCAACATCCAGCAGAAAGCCTCGCGAAC---CAATCTCTCT
CCTCCTCCTCCCCTGTCTCCACATCCGATCCGAGGCGAGGCGGCGATGCAGATCCAGGTCCGGTGCGGGTGCGGCGAGGC
GGCGTGCCCGGAGTGGGCGGTGGTGGAGGTGCAGGGCGTGCTGCAGCCGCAGCCCTGCTTCTCCGGCCGCATCCAGGGTC
TCCACATCGGCCGCCTCTGCTCCACCTCCTCCGCCCCGACTTCCAAGGCAAGAACCACTAACCCTCCCAGCATATTTGGT
TTCTTGATTTGGTTTGGGGGATCTTCACGGCGGTCTTGCCATTGCCAGGGCGGGTACACCTTCACCGTGGGGTACCATGA
GCTCGCCGGCTCGAAGGTGACTCTCAAGAAACCCCTGCTTGTGCTGAGGAAGAAGAAGAACGACAACGGAGATACCGGCG
AGCTCGGCCAAGGTGGAC---CGGCGGCGGCGGCGGAGGTGGAGCTGGAGGTGATCGGCATCATCCGGCACAAGATTCTC
TTCAAGGACCGCCCCAAGGCTCTCATCTCAAGTAATCACCGATCCAATTTCCATTTTCACCACAATTGCCAGCACGGCGT
CGGTGATTCGGC--AGAAACTTTGCTGATGGCGTGTTTTCGCCGGTTTCCTTGTGCAGAGCCGGTGCCCAAGGAGAAGAA
GGCCCTGCCGGCAGCGGCGACCCCATCAACCGTGCCTCCCGCTTCCTGAAGAATCCTCTTTCTGACTAAAAAAAAGTTTG
TTAAGGATCTGTAGCTCCCTGGGGGTTCTGATTGTGCCCGTTTGTTTCCCCCGTCTAGTTAGTGGTCACATCTTCCTCTA
CCATTGTTGTGCTTGTGCCGTACGTATACCAGTATGAATTTCCCGTCTCGTTGAAGCACACTAGTGACAAAATAGCTGAA
ACTTCTGGGGCAGTTTGGGTCCACTGCTGCTATGGGAACCAAATACCACCATCATATTTGCTTATATTCTTGTGGTGATC
AGGTTCATTTTGCATATCTCCTGACTTTTGCATCTAGAGGATACTCAAATACTCCCTCTGTCTCAAAATAAGTGTCTCAA
ACTTAGTACAACTTTGGGACGGAGGGAGTATAATTTATCGTGTTTGAAGTACAA-----AAGATACGGCTAGCATCAAAG
CAATTAACTGTGACTAGGAAAAGAGATTAACAAGAAACACCTAGACACTAGTATGTAAGAACGAAAGTCCTCGTGGTGGT
GGTTAAGATCAGA---TGTAACCCTGGCAGCCAAATGGTCATGTTGATGTTTCAGAGCAGCGCCTTCAGATAAAGATGAC
ACACGCCAATGTTTTCTATCCAGTTCCAGCCAGTATAGATCATACTCCACACATGAAAGTGGAAATACTCCCTCCGGCCC
TTTTTGGTCTGCATATAAGTTCTATCCAAAGTCAAAGTATCTTTGCTTTGACCAAACTTATAGAAAAACGTATCAACAAT
CACAATGTCAAATCTATATTGTTAGATTCGTTTTGAAATGTAGTTTCATAGTATATATATTTTGTATTGTAGATGTTGAT
ATTTTTCAATATAAATTTGTTAAAACTTTGTAAAGTTTGACTTGACAAAAATCTAATACGCAGAGTAAAAAGGACCAGAG
GCAGTATTTCGTACTACTAGCGATGCCACGCGCAGTTGACGCGACTAGGAAGACCAAATCTGCGGGAACATA-----TGC
TAGGTCCAACTAATTAATAGAGGCCAGAATATCTGCCTTGAAAGCAGTGGTTTTATAACAAGGACGCAAGACACATACTT
GACCATGATAATTCGG-TAAAGGTACTTGAAGGACTAAAATTTTGGACGTCAAATCCGAACAATTAAGGCCTTGACGGAG
TTGTGGCACCCAACCAAAAGCCACCATGAATTCATTTGGAGCTAGCCACACCGTTGGGGGCT------------------
-TGTTTCAGGGAAGGTTGTCAAAAAGAGGCCAGAGACCACCTATG-----------------------------------
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>chr5B_772
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---------------------------------------------------GAGAGTCCATTGTTTCATCGTTGGAGCAA
CCAGGGCAGTATAAGCAAAGAAAATCATTTGGAAAAAAAGGGAAGCAAAAACAATTGGGGGTGTTTTGGCGCGAACTAAT
AGAAGCACGGGGAAATGAAAAGGGCGGGAAAGCAGCCCGCCAACATCCAGCAGAAAGCCTCGCCAAC---CGATCTCTCT
CCTCCTCCCCCGCTGTCTCCACATCCGATCCGAGGCGAGGCGGCGATGCAGATCCAGGTCCGGTGCGGGTGCGGCGAGGC
GGCGTGCCCGGAGTGGGCGGTGGTGGAGGTGCAGGGCGTGCTGCAGCCGCAGCCTTGCTTCTCCGGCCGCATCCAGGGCC
TCCACATCGGCCGCCTCTGCTCCACCTCCTCCGCCCCGACTTCCAAGGCAAGAACCACTAACCCTCCCTGCATATTTGGT
TTGTTGATTTGATTTGGGGGATCTTGACGGCGGTCTTGCCATTGCCAGGGCGGGTACACCTTCACCGTGGGGTACCATGA
GCTCGCCGGCTCGAAGGTGACTCTCAAGAAGCCCCTGCTTGTGCTGAGGAAGAAGAAGAACGACAAGGGAGATGCCGGCG
AGCTCGGCCAAGGTGGAC---AGGCGGCGGCGG---AGGTGGAGCTGGAGGTGATCGGCATCATCCGGCACAAGATCCTC
TTCAAGGACCGCCCCAAGGCCCTCATCTCAAGTAATCACCGATCCAATTTCCATTTCCACCACAATTGCCAGCACGGTGT
CGGTGATTCGGC--AGAAACTTTGCTGATGGCGTGTTTTTTCTGGTTTCCTCCTGCAGAGCCGGTGCCCAAGGAGAAGAA
GGCCCTGCCTGCAGCGGCGACCCCATCAACCGTGCCTCCCGCTTCCTGAAGAA-------------------TAAGTTTG
TTAAGGATCTGTAGCTCCCTGGGGGTTCTGATTGTCCCCGTTTGTTTCCCCTGTCTAGTTAGTGGTCACATCTTCCTCTA
CCATTGTTGTGCTTGTGCCGTACGTATACCAGTATGAATTTCCCGTCTCGTTGAAGCACACTAGTGAAAAATTAGCACAA
ACTTCTGGGGCTGTTTGGGTCCA---CTGCTATGGGAACCAAATACCACCATCAAATTTGCTTTTATTCTTGTGGTGATC
AGGTTCATTCTACATG------------TGCATCTAGAGGATACTCAAATA-----------------------------
------------------------------TAATTTATCGTGTTTGAAGTACAA-----AAGATACGGCTAGCATCGAAG
CAATTAACCGTGACTAGGAAAAGAGATTAACAAGAAACACATAGACAGTAGTATCTAAGAACGAAAGTCCTCGTGTCGGT
GGTTAAGATCAGACCGTGTAACCCTGGCAGCCAAATGGTCATGTTCATGTTTCAGAGCAGCGCCTTTAGATAAAGATG--
ACACGCCAATGTTTTCTATCCAGTTCCAGTCAGCATAGATCATACTCCACACATGAAGGTGGAAATATTTCATAC-----
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>SNPs
S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----S--------------------
SSS----S-----------------S------------S-------------------------------------S---
----------------------------------------------------S---S-------SS-SSS----------
-----------S-----S--------S-----------------------------S-----------------------
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--------------------------------------S-------------------S---------------S-----
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------------------------------------S--S-----------------------------SS-SS------
-------S----------SSS----------------------------------S------------------------
------------------------------------------S-------------------------------------
----------SSSS-----------------S------------------------------------S-----------
----S------S--------------------------------------------------------------------
-----------S-------------------------------------------------------------------S
----S------------------------------------S--------------------------------------
----S---------------------------------------------------------------------------
---------------------------S----------S-----------S-----------------------------
------------------------------------------------S-SSS-SSSSS---------S-----------
-----------------S---------------------------------S----------------------------
-----------S-----S---------------SS----------S----S----------SS-----------------
-S------------------------------------------------------------------------------
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-------------------------------S----S----------------------------------SSSSSS---
---------S----------------------S--------------------------------S--------------
S-------S--S-S-SS--------S-----------S---S-S-----------------------------S------
---S---S----SSSSSSSSSSSS-SSS--SS---------------S-------------SSSSSSSSSSSSSSSSSSS
S----------------------------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_176
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----------------------------------------------------------------------------ACGC
GTCCTTTCTTTTGCAC----------------------------------------------------------------
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>reverse_2178
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-----------------ATAACCCTGGCAGCCACTTG-------------------------------------------
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