>input_sequence_72992
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---------------------------------------------------------ATGGCGATCATCTCCGAGGACAT
CATGCAGGAGGACGAGACCTCA------CCGCAGCAGCAACAGGTGGCGGCCGCCA---AGAAGGATACCAGCAGCACGG
AGGTGGAGAAGAAGG------AGGAGGAGAGCAAGGGGAGGCAGCCAAACTCCGGCAACGGCCTCGACCTGGACAACTAC
TCGTGGGCGCAGCAGCTGCCGGAGGTGAACCTCACCGTCCCCGTCCCCGAAGGGACCAAGGGCAGGTCCGTCGTCTGCGA
GATCAAGAAGGACCACCTCAAGGTCGGGCTCAAGGGCCAGCCTCCCATCATCGAC-------------------------
--------------------------------------------------------------------------------
------------GGCGAGCTCCACAAGCCCGT-CAAGGTCGAGGACTGCTTCTGGAGCATCGAGGACGGGAGTTCGCTGT
CCATACTGCTCACCAAGCGCAACCGGAGCGAGTGGTGGAAGTCCGTGATCAAGGGCGATCCCGAGATCGACACCCAGCGC
GCCGAGCCGGAGAGCAGCAAGCTCTCGGATCTGGACCCC-----------------------------------------
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-------------------------------------------------------------------GAGACGAGGCAGA
CCGTGGAGAAGATGATGTTCGACCAGCGGCAGAAGCAGATGGGCTTGCCAACCAGTGAGGAGATGCAGAACCAGGACATG
CTCAAGAAACTCAAGTCCCAGTACCCCGACATGGACTTCTCCGGGATGAAGATGCCTTCTTA-G----------------
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---------------------------------------------
>chr3D_1_TraesCS3D01G509300
CGTGTGGGCACTTGAGCAGTTGTATTGCCGCGGGCGCACAGAAGCCCGTTTCGAGTAATTAAGGATTTTA---TGTGTAA
ATGTAGGGTC-GAACCAGCCCACTTCAGCTATGGGGAAAAAGTTAGCAGAAAATGTATTGAAGAGCTGGCTTGTTAGCTG
CCTGACTGTCTCTTAACTACCATGTGTCAAACAAGTTCTACTTAACATATTCAAGAAACATAATGTATGTATCCAACATA
ATCTCTTTTTGACCGAAGGGATTTTGCGTGGAATACGGCAGGAAATCTGGACAGTGCTTTCAGTT-CTTCACCCACCATC
AACCACCATCGTTCTTTCTTACTTTCTTACATC---TAGTGTCACGCATTGCTAACAACAAATGTTTA----CTTTCTAC
ACTACCAACGCGATCCTCCATTCGGCAAGCATGAATGAGCAGGATTGTTCCACTCGCGCATCGCCATTGGGGATTCATCA
TAGTATTGTGAGCATAGTG-CCCTTCTCTGTAACAGTAGTGCGCCAAGCTGCAAACAGCGTTCAGAAAACCACTGAAAAA
AATAGGAC-------------------------------------------------GCTAATAGCATATTTTCAGGGGC
AGCGCTATTTTGTATAGCACGCTATAGCATATTAATAGCGCAATTTAAGGACGGTGCTATTTTGTATAGCACGCTATTTT
TTTCCTTCGCAGAAACCTACTCCCACACAA-GCAAGCCTTCACAAGAAACTTCATGGGGAAACAAATCTTC-AAGGAAAG
CGCTCAAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
TTTTTTTGAATTTGAATTCGTTCC--------------------------------------------------------
-------------------------------------------------GTACTCAAACTGACCAAGAAGGAAACTCAAA
AGGCAGAGGTGGAAGCGGATTACGAATCCAGCCCGGGCACGGGCCGGCCGGGGCTGCCGCAGAGCGCAATATAAATAAAC
GGGACCCCAAAGCCCAAGGCCTCATC----AACTCGTCTGCGATCGAAACC-CCACACCGACCCGAGACCTCGACGCTAG
---------AAGCCGACCGAAACCCTAGATCAGATCAGAGCCGGAGCGGCGGC---CATGGCGATCATCTCCGAGGACAT
CATGCAGGAGGACGAGACCTCA------CCGCAGCAGCAACAGGTGGCGGCCGCCA---AGAAGGATACCAGCAGCACGG
AGGTGGAGAAGAAGG------AGGAGGAGAGCAAGGGGAGGCAGCCAAACTCCGGCAACGGCCTCGACCTGGACAACTAC
TCGTGGGCGCAGCAGCTGCCGGAGGTGAACCTCACCGTCCCCGTCCCCGAAGGGACCAAGGGCAGGTCCGTCGTCTGCGA
GATCAAGAAGGACCACCTCAAGGTCGGGCTCAAGGGCCAGCCTCCCATCATCGAC-------------------------
--------------------------------------------------------------------------------
------------GGCGAGCTCCACAAGCCCGT-CAAGGTCGAGGACTGCTTCTGGAGCATCGAGGACGGGAGTTCGCTGT
CCATACTGCTCACCAAGCGCAACCGGAGCGAGTGGTGGAAGTCCGTGATCAAGGGCGATCCCGAGATCGACACCCAGCGC
GCCGAGCCGGAGAGCAGCAAGCTCTCGGATCTGGACCCC-----------------------------------------
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-------------------------------------------------------------------GAGACGAGGCAGA
CCGTGGAGAAGATGATGTTCGACCAGCGGCAGAAGCAGATGGGCTTGCCAACCAGTGAGGAGATGCAGAACCAGGACATG
CTCAAGAAACTCAAGTCCCAGTACCCCGACATGGACTTCTCCGGGATGAAGATGCCTTCTTA-GATT-GTCTG-------
--------TTCGAGGATCCAAGGCGATGAATTTATAAG-ATTTTAGATGGAGAAAATTGCTTTTACTAC---CTTAATTA
GTACTCGTACTTTGCTATTTTCGGTGTCTTGTGGTTTA-GTGTTTGTTTATTTATGTCTATTATTGT-------------
-----------------------------------------------------GACGGTCACAGTATGCGCGATGCTTCC
GAAATATAAGTGAACAATGTTTTTAATCTTCTTGTC-GACTTTCTTGGTTCTTTCAAAAA-AAAA-TCTTAATTCAAACT
TTGTAAACTTTGATCAAGTTTACAGAAAAATTT--ATCTTCCGTTTGGCTCATGAAGTGTATGAGAAATTAGGCCTTCGT
GCTCACTGCAGCGAAGCGAATCAGTGGGACATCAATCTCAAAGGTTCAGACATTGGG-ATGTACAGTTTAGGCAGGTTCT
TGTCGACTGAATACTTTCTATCTAACCAAAACTATGCAC---TGGTATGATATGCACGTATTTATG--------------
-------------------------------------------TTTCAGATTTTGGTGGGTGCTTGACTCTTTCCTGAAG
TTGGCGATGCCGAACTTAATTACTAACAGCCCGACCAAACGTCATGATGTCTTTGAAAACAGCTCTATTGACTCTGAA--
-----------TTCTCTTAAGTGGTCTCTGAATTAATATTGCTCTATTCTTTTCCTTTATAA------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CAGAGTAAATAATTG
TTGCTGCTTCGATCATACACATAC-TATTTCTAATGATATTCATATGATGATAACTTGGTTGCTGTTTCTGTGTGACCTT
TGGAGTGTTTTTCCTACAGATAGAAACCTAGGTGCGCAGATGTTCTGTTATATTTTTTTAACTGATGTCCGGTAATTTAC
TAGTCATAGTC-TTTTTTTTAGCATCCATTAGTCCCTGCTTCACTTT---TTTTCAGCAACTGGAGAATCTTAATGTTTA
CAGGGATACAAGTATAACCCTCTGGGCGAACCAAAATGCAAAC-------TACCCACATCAAATACAGTGGCTGCCTTAA
CTATATTATGGGCATAAAAAATTAATTTTCTATGCTCATGAGAGA
>chr3A_1
CGTATGGGCACTTGAGCAGTTGTATTGCCACGGGCGCACAGAAGCCCGTTTCGAGTAATTAAGGTTTTTTGTGTGTGTAA
ATGTAGGGTCAGAACCAGCCCACTTCAGCTATGGGGAAAAAGTTAGCAAGAAATGTATTGAAGAGCTGGCTTGTTAGCTG
CCTGACTGTCTCTTAACTACCGTGTGTCAAGCACGTTCTACCTAACATATTCAGGAAACATAATCTACGTATCCAACATC
ATCTCTTTTCGACTGAGGGATTG-----------------------------------TTCAGCT-TTTCACCCACCG--
----------------TCTTTCTTTCTTACATCTTATAGTGTCTTGCAATGCTAGTAACAAATGTTTATCTTCTTCCTAC
GCTACCAACGCAATCCTCCATTCGGCGAGCATGAATGAGCAGGATTATTCCAGTCGTGCATCGCCACTGGGGATTCATCA
TAGTATTGTGAGCATAGTG-CC-TTCTCTGTAACAGTAGTGTGCCAAGCTGCATACAGCGTGCAG-AAACCATTGAAAAA
AAAATAGCGCGATATAGCATTGCTTTTTTTTTTTTTGAGATCCAACAATATAGCATTGCTAATAGCATACTCTCAGGGGC
GGTGCTATTTTGTATAGCAC-------------------------------------------------------ATTTT
TTTTCCTTGCAGAAACCTACTCC-ACACAA-GCAAACCTTGGCAAGAAACTTCATGGGGAAACAAATCTCCAAAGGAAAG
CGCTTTTGGC----------------------------------------------------------------------
--------CTGCTGCTGGAGAATTCCGAACTCAACT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------ATTTTTTTGAA-----------------------------------
--------------------------------------------------------------------------------
---TTTTGAATTTGAATTCGTTTC--------------------------------------------------------
-------------------------------------------------GCACTCCAACTGACCAAGAAAGAAACTCAAA
AGGCAGA------------------ATCCAGCCCGTGCACGAGCCGGCCGGGGCGGCCGCGGAGCCCAATATAAATAAAC
GGGACCCCA--GCCCAAAGCCCCGTCATCAAACTCATCTGCAATCGAAACC-CCACACCGACCCAAGATCTCGAGGCGAG
CGCACGA--AAGCCGACCGAAACCCTAGATCAGATCAGAGCCGGAGCGGCGGC---CATGGCGATCATCTCCGAGGACAT
CATGCAGGAGGACGAGGCGTCA------CCGCAGCAGCAGCAGGCGGCGGCCGCCG---TGAAGGATAACAGCAGCACGG
AGGCGGAGAAGAAGGAGA---AGGAGGAGAGCAAGGGGAGGCAGCCAAACTCCGGCAACGGCCTCGACCTGGACAACTAC
TCGTGGGCGCAGCAGCTGCCGGAGGTGAACCTCACCGTCCCCGTCCCCGAAGGGACCAAGGGCAGGTCCGTCGTCTGCGA
GATCAAGAAGGACCACCTCAAGGTCGGGCTCAAGGGCCAGCCTCCCATCATCGAC-------------------------
--------------------------------------------------------------------------------
------------GGCGAGCTCCACAAGCCCGT-CAAGGTCGAGGACTGCTTCTGGAGCATCGAGGACGGGAGGTCGCTGT
CCATACTGCTCACCAAGCGCAACCGGAGCGAGTGGTGGAAGACCGTGATCAAGGGCGACCCGGAGATCGACACCCAGCGC
GCCGAGCCGGAGAGCAGCAAGCTCTCGGATCTGGACCCG-----------------------------------------
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-------------------------------------------------------------------GAGACGAGGCAGA
CCGTGGAGAAGATGATGTTCGACCAGCGCCAGAAGCAGATGGGCCTGCCCACGAGCGAGGAGATGCAGAATCAGGACATG
CTCAAGAAACTCAAGTCCCAGTACCCGGACATGGACTTCTCCGGGATGAAGATGCCTTCTTAAGATTTGTCTC----TTA
G-------CTAGAGGATCTAAGGCGAT-AATGCGGAAG-ATTTTAGATGGAGAAT-------------------------
-------TACTTTGCTA-TTTCGGTGTCTTGTGGTTTA-GTGTTTGTTTATTTATGTCTATTATTGT-------------
-----------------------------------------------------GATGGTCACTGTATGCGCTATGCTTCG
GAAATATAAGTGAACTATGTTTTTAATGTTCTTGTCAGACTTTCTCGGTTCTTTCAAACAGAAAATTCTTAATTCAAACT
TTGTAAACTTTGATCAAGTTTATAGAAAAACTTGAATCTTCCGTTTGGCTCATGAGGTGTATGAGAAATTAGGCCTTCGT
GCTCACTGCAGCGCAGCCAATCAGTGGGACATTGATCTCAAAGGTTCAGACATTGGGGATGTACAGTTTAGCCAGCTTCT
TGTCGACTGAATACATCCTGTCTAACCAGAACTATGCACTGATGGTACGATATGCACGTATTTATGT-------------
------------------------------------------TTTTCAGATTTTGGTGG-------TTTCTTTCCTGAAG
TTGGCGATGCCGAACTTG----CTAGCAGCCTGACCAAACGTCATGATGTCT-----------------------GAATT
TGAGGCTGCTTTTCCCTTAAGCGGTCTCTGAATTAATATTGCTCTATTCTTTTCC--TATAA------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CAGAGTAAATAATTG
TTGCTGCTTCGATCATAAACATAT-TATTTCTAATGATATTCAT--GATGATAACTTGGTTGATGTTTCTGTGTGGCCTT
TGGAGTGTTGTTCCTCGGTC-AGAAACCAAGGTGCGCAGATGTTCTGTTATATTCTTTTT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr3B_1
CGTATGGGCACTTGAACAGTTGTATTGCTGCGGGCGCACAGAAGCCCGTTTCGAGTAATTAAGGATTTTA---TCTGTAA
ATGTAGGGTC-GAACCAGCCCAGTTCAGCTACAGGGGAAAACTTAGCAGGAAATGTACTGAAGAGCTGGCTTGTTTGCTG
CCTGACTGTCTCTTAACTACCGTGTGTCAAGCATGTTCTATCTAACACATTCAGGAAACTTAATCTATGTATCC-ACATA
ATCTCTTTTCAACCGAGGGATTTTGTTG-GGAATATGGAGGGAAATCTGGACTGTGATTTCAGTTTCTTCACCCACCA--
----------------TCTTTCTTTCTTACATCTTCTAGTGTCTCACATTGCTAGTAACAAATGTTTATCTTCTTA----
----------CAATCCTCCATTCGGCAAGCATGATTGAGCAGGATTGATCTAGTCGCGCATCGGCATTGGGGATTCATCA
TAGTATTGTGAGCATAGTGCCC-TTCTCTGTAACAGTAGTGTGCCTAGCCGCACAGTG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TGCAGAAACCCACTCCCACACAAAGCAAACCTTCACAAGCAACTTCATGGGGAAACAAATCTTCAAAGGAAAG
CGCTTAGGCCCGTTGCCCGCATCGTCCATGTTTTCGAGACGAAGCTTCGTGCATAGGATGGAGGCACAGGTGATATGGGT
GGAAAGTGCGGGTGTTGAAGGCTGACGATATCAACTGGACACTAGCCGCTTGAGGTGGCTGGTGGGGGAGATCAAACTTT
TTGAAGATACAAAGCATGTTCAAAAATTCTTGTTTTTTTTTACAGACACACATCCATTCTTGTTGTACAACCTCAAAAAA
TTTCAGCTCCTAATTCGATCTACACTTTGAGAACAAAGAAGACAAAATCAGATGTGAATAGTACCAAATATTGTTCACCC
AACGCTAACGCTATTCATTGCTGAATTTGTCTCTCTAACTGCATATCTAGTTGTGGGCTCATTTTTTCTGGAGTTGTAGA
CACACCCCGCAGGTATTATGTCAAAAAAATTCAGATTTTTTTGACTTTTCTAAATATGAAATTTCGAGGTTGATTCTACG
ATCTCACCTAAATAGTCCCCCCCTAGGTGGCTGAGACGAAGACATATTGGAGAACGTGAGGTAGTTCCGTAATCCAACTT
TTTTTTTGAATTTGAATTCGTTCCATACTCAAACTTTTTTTTAAAGAATTTGAATTCGTTCCGTACTCCCCCGCAAAAAG
AAGAATTTGTTCCGCACTAATTTTTTTTTTATGAATTTGAATTCGTTGCGTACTCAAACTGACCAAGAAAGAAACTCAAA
AGGCAGAGGTCGAAGCGGATTACGAATCCAGCCCGTGCACGAGCCGGCCGGGTCGGCCGGAGAGCCCAGTATAAATAAAC
GGGACCCCCAACTTCA--------TCATCAAACTCACCTGCGATCGAAACC-CCAGCCCGACGCGAGACCTCGACGCGAG
---------AACTCGACCGAAACCCTAGATCAGATCAGAGCCGGAGCGGCGGCGGCCATGGCGATCATCTCCGAGGACAT
CATGCAAGAGGACGAGACCTCACCGCAGCCTCAGCAGCAGCAGGCGGCGGCCGCCGCCCAGAAGGACAACAGCAGCACGG
AGGCGGAGAAGAAGGAGACGGAGGAGGAGAGCAAGGGGAGGCAGCCGAACTCCGGCAACGGCCTCGACCTGGACAAGTAC
TCGTGGGCGCAGCAGCTGCCGGAGGTGAACCTCACCGTCCCCGTCCCCGAGGGGACCAAGGGCCGGTCCGTCGTCTGCGA
GATCAAGAAGGACCGCCTCAAGGTCGGGCTCAAGGGCCAGCCCCCCATCATCGAC-------------------------
--------------------------------------------------------------------------------
------------GGCGAGCTGCACAAGCCCGT-CAAGGTCGAGGACTGCTTCTGGAGCATCGAGGACGGGAGGTCGCTGT
CTATACTGCTGACCAAGCGTAACCGGAGCGAGTGGTGGAAAACCCTGATCAAGGGCGATCCGGAGATCGACACCCAGCGC
GCCGAGCCGGAGAGCAGCAAGCTCTCGGACCTGGACCCC-----------------------------------------
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-------------------------------------------------------------------GAGACGAGGCAGA
CCGTGGAGAAGATGATGTTCGACCAGCGCCAGAAGCAGATGGGCCTGCCCACCAGCGACGAGATGCAGAACCAGGACATG
CTCAAGAAGCTCAAGTCCCAGTACCCGGACATGGACTTCTCCGGGATGAAGATGCCTTCGTA-GATT-GTCC--------
-------CTTGGAGGATCCAAGGCGATGAATTCAGAAG-ATTTTAGATGGAGAAATTGCTT----CTGCTAGCTTAATTA
GTACTCGTACTTTGCTATTTTCGGTGTCTTGTGGTTTA-GTGTTTTTTT---TATGTCTATTATTGT-------------
-----------------------------------------------------GATGGTCACTGTATGGGCGATGCTTCC
GAAATATAAGTGAACTATGTTTTTAATGTTCTTGTC-GACTTTCTCGGTTCTTTCAAAAA-AAAAATCTTAATTCAAACT
TTGTAAACTTTGATCATGTTTACAGAAAAAATTGGATCTTCCA--------------------AGAAATTAGGCTTTCGT
GCTCACTGCACGGCAGCCAGTCAGTGGGACATTGATGTCAAAGGTTAAGACATTGGG-AGGGATGTACAGT---------
------------------------------------------TGGTACGATATGCATGTATTTATGT-------------
------------------------------------------TTTTCAGATTTTGGTGGGTGCATTTTTCTTACATGAAG
TTCATGATGCCGAACTTA----TTAGCA-----------CGGCATGATGTCT---------------------CTGAATT
TGAGGCTGCTTTTCTCTTAAGCAGCCTCTGAATTATTATTGCTCTATTTTTTTCC--TTTAA------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CAGAGTAAATTATTG
---CTGCTTCGATCATACACATGG-TATTTCTAATGATATTCATATGATGATAACTTCGTTGCTGTTTCTGTGTGGTCTT
TGGAGTGTTTTTCCTAC---TAGAAACCTAGGTGCACAGATGTTCTGTTGTGTTTTTTAG-CTGATGTTTGGTAATTTAC
TAGTCACAGTTTTTTTTTTCAGCATACATTAGCCCCTGCTTCACTTTTTATTTTGAGCAACTGGAGAATCTTGTCGAT--
--------------TAACCCTCCGTGGGAGCCAAAATGCAAATATGCATGTACCCACATCAAGTACAGTGGCTGCCTCAA
CTAT--TATGGGTGTAAAAATTTAATTTTCTATGCTCATGAGAGA
>chr3D_867
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------------------------------------------------------------------CAATATAAATAAAC
GGAAACCCGAAGCCCAAAGCCTCATC----AACTCATCTGCGATCGAAACC-C-ACCTCGACCAGAGATCTCGACGCGAG
CGCTTCCCCAAGTCGACCGAAACCCTAGAGTAGAGACAGA--------GCGGCGGCCATGGCGATAATCTCCGAGGACAT
CATGCAGGAGGACGAGGTTTCG------ACGCAGCCGCAGCAGGCGGCGGCGGCCG---TGAAAG---ACAACAGCACGC
AGGTAGAGAAGAAGGAGA---AGGAGGAGAGCGAGGGGAGACAACCAAACTCCGGCAACGGCCTCGACCTGGAGAAGTAC
TCGTGGGCGCAGCAGCTACCAGAGGTGAACATCTCCGTCCCCCTCCCGGAAGGAACGAAGGCGAGGTTCCTCGTCTGCGA
GATCAAGAAGGACCACCTCAAGGTCGGACTCAAGGGCCAGCCTCCGATCATCGATGTAAGTAGCTTCAAACTATCACTAT
CAACTATGTGCACAACAGTTCATCTTGTT-----------TCTGTCAAATCTCTTGCTGATGCGGTGTTAATTTGTCTC-
-----TTACCAGGGTGAGCTGCACAAACCAGT-TAAGGTCGAGGACTGCTTCTGGAGCATCGAGGACGGGAGCTTGCTGT
CCATACTGCTGACAAAGCGTAATCAGAGCGACTGGTGGAAATCCCTGATCAAAGGCGATCCGGAGATCGACACCCAGCGT
GCTGAACCTGAGAGCAGCAAGCTCTCTGATCTGGACCCC-----------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GAGACGAGGCAGA
CCGTGGAGAAGATGATGTTCGACCAGCGCCAGAAGCAGATGGGCCTGCCCACCAGCGAGGAGATGCAGAACCAGGACATG
CTCAAGAAACTCAAGTCCCAGTACCCTGACATGGACTTCTCCGGGATGAAGATGCCTTCTTA-GATT-GTCT--------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr3A_867
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------------------------------------------------------------------CAATATAAATGAAC
GGATCCCCAAAGCCCAAAGCCACATC----AACTAATCTGCGATCGAAAACTC-ACCTCGACCAGAGATCTCGACGCGAG
CGCTTCCCCAAGTCGACCGAAACCCTAGAGTAGAGACAGA--------GCGGCGGCCATGGCGATTATCTCCGAGGACAT
CATGCAGGAGGACGATGTTTCG------ACGCAGCCGCAGCA---------CGCCG---TGAAGG---AGAACAGCACGG
AAGTGGAGAAGAAGGAGA---AGGACGAGAGCAAGGGGAGACAGCCAAACTCGGGCAACGGCCTCGACCTGGAGAAGTAC
TCGTGGGCGCAGCAGCTACCAGAGGTGAACATCTCCGTCCCCCTCCCTGAAGGAACGAAGGCGAGGTTCGTCGTCTGCGA
GATCAAGAAGGACCACCTCAAGGTCGGACTCAAGGGCCAGCCTCCCATCATCGATGTAAGTAGCACCGAA------CTAT
CAACTGTGTACACAACAGTTCATCTTGTCCTTTATTTCAGTATATAAAATCTCTTGCTGATGCAGTGTCAATTCGTTTCT
TATA-TTACCAGGGTGAGCTGCACAAACCAGT-TAAGGTCGAGGACTGCTTCTGGAGCATCGAGGACGGAAGCTTGCTGT
CCATACTGCTGACGAAGCGTAATCAGAGCGACTGGTGGAAATCGCTGATCAAAGGCGATCCGGAGATCGACACCCAGCGC
GCCGAGCCGGAGAGCAGCAAGCTCTCGGATCTGGACCCGGAGACCAGGGACGAAGCTCCCTTGTAGGCATTGGGGTCAAT
TGACCCCAATGAAATGAGGAAAACCTTCATTAATTTAGTACTAAACACTATGTATTTATTGAGGATGACCCCATTGCCAT
AGACATGACCCCAGCAAACTTTTTCCTAGCTTCGTCCCTG----------------------------------------
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----------------------------------------------------------------CCGGAGACGAGGCGGA
CCGTGGAGAAGATGATGTTCGACCAGCGCCAGAAGCAGATGGGCCTGCCCACCAGCGAGGAGATGCAGAACCAGGACATG
CTCAAGAAACTCAAGTCCCAGTACCCGGACATGGACTTCTCCGGGATGAAGATGCCTTCTTA-GATT-GTCTC----TTA
GCTGGAGCCTAGAGGATTTAAGGTGAT-AATGCCGAAG-ATTTTAGATGGAGAAATCGCTT----CTAC---CTTAATTA
GTACT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr3B_867
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------------------------------------------------------------------CAATATAAATAAAC
GGAACCCCAAAGCCCAAAGCCCCATC----AACTCATCTGCGATCGAAACC-C-ACCTCGACCAGAGATCTCGACTCGAG
CACTTCCACAAGTCGATCGAAACCCTAGAGTAGAGACAGA--------GCGGCGGCCATGGCGATCATCTCCGAGGACAT
CATGCAGGAGGACGAGGCGTCG------ACGCAGCCGCAGCAGCAGGCGGCGGCCG---TGAAGG---AGAACAGCACGG
AGGTGGAGAAGAAGGAGA---AGGAGGAGAGCAAGGGGAGGCAGCCAAACTCCGGCAACGGCCTCGACCTGGACAACTAC
TCGTGGGCGCAGCAGCTACCAGAGGTGAACATCTCCGTCCCCCTCCCTGAAGGAACGAAGGCGAGGTTCGTCGTCTGCGA
GATCAAGAAGGACCACCTCAAGGTCGGACTCAAGGGCCAGCCTCCCATCATCGATGTAAGTAGCATCAAA------CTAT
CAACTATGTAGACGACAGTTCATCTTGTCCTTTAT--------------------------GCGGTGTTAATTTGTCTCT
TATAATTACCAGGGTGAGCTGCACAAACCAGT-CAAGGTCGAGGACTGCTTCTGGAGCATCGAGGACGGGAGCTTGATGT
CCATACTGCTGACAAAGCGTAATCAGAGCGACTGGTGGAAATCCCTGATCAAAGGCGATCCGGAGATTGACACCCAGCGT
GCCGAGCCGGAGAGCAGCAAGCTCTCGGATCTGGACCCC-----------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GAGACGAGGCAGA
CCGTGGAGAAGATGATGTTCGACCAGCGCCAGAAGCAGATGGGCCTGCCCACCAGCGAGGAGATGCAGAACCAGGACATG
CTCAAGAAACTCAAGTCCCAGTACCCGGACATGGACTTCTCGGGGATGAAGATGCCTTCTTAAGATT-GTCTCTTACTTA
GCTGGAGCCTGGAGGATCTAAGGCGAT-AATGCGGAAGAATTTTAGATGGAGAAATCGCTT----CTAC---CTTAATTA
GTATAG-----TTTCTATTTGGGTGTCGTAGTATTTTAAGTGTCTGTTTATGCGTCTACGTACCTTTTGTAGTTTGCTTT
TTTTTTTTTGCGATGGGCCTTTTGTAGTTTGCTATTTGGATGACTTGTGGTTGGATGGCAACAGTTTTTCCGATGCTTCA
GAAATAAGTTAACTAGTACTCCCTCCGTCCCATAATGTCAAAATATGGCGCATATTAATTAATTTTGTCTTAAGTCAGAA
--------TTTGATCAAGTTTACAGAGGAG--TGGATCTTATGTTTGGCTCATGAGGTGCTCACACAGT-----------
--------------AGCCAGTCAGTGTGATATCGATCCCAAAGGTTCAGACTTTGGG-AAGTACAGTTTCAGAAGGGAAA
AGGTTTCAGGCGCTGGGAGGCTAAGCAGCTAACAGAATACAAGTGCATAGTTTGGGCTACACAGAAAGTTTTCAGTCAAC
AAGAAGCTGGATGTTGCTATAGCATGGCTGCACCAAATTATGTTTTCAGATTTTTAGCAGACGCACCAAAG---------
------------------------------------AAACGTCATGATGTCTTTGAGCACAGCTCTATTGAGTCTGAATT
TGAGGTTGTTTTGCTCGTAAGCGGTCTTTGAATTA--ATTGCTCTTTTCTTTTAATAGACTAATTAATTGCTATTTATAA
TTTCATATAATTTTAGTCTTGTAACTCCTATTTCTCCACCGTTTGATCGCAGCGAATGAACGGCCCCTAAATTCGCCAAT
CACCGTAACATTTGTAAATAAAAAAAATGATTTTTAGATTGCTTACCACATTTGTCTTGTGGATCCAGACTAAATAATTG
TTGCTGCTTCGATCATACGGCGGAATATTTCTAATGATATT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr3A_1067
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-------------------------------------------------GCCGCCA---AGAAGGATAACAACACAGAGA
TGG------AGAAGGGGA---AGGAGGAGAGCAAAGCGAGACAACCAAACGCTGGCAACGGCCTTGACCTGGACAAGTAC
TCGTGGTCGCAGCAGCTACCGGAGGTGAACCTCTCCATCCCCGTCCCCGAAGGAACCAAGGCGAGGTTCGTCCTATGCGA
GATCAAGAAGGACCATCTCAAGGTCGGGCTCAAGGGCCAGCCTCTCATCATCGAC-------------------------
--------------------------------------------------------------------------------
------------GGCGACCTCCACAAACCGGT-CAAGGTCGAGGACTGCTTCTGGAGCATCGAGGACGGGAGGTCGCTGT
CCATAGTCCATACTGCTCATGA--AGAGCGAGTGGTGGAAATCCCTGATCAAGGGCGATCCGGAGATCGACACCCAGCGT
GCCATACCAGAGAGCAGCAGGCTCTCGGATCTGGACCTGCGTTTTGATTTTCGGTTTGTGTTTTTTTTCGTCCTTGGCCG
AAATGGCCGAATTTTGGGAATTTTAAATTTTTCGGCAAAATCTCGGACGAAATTTCAAAATCAAAATTTGAAAATTTGGC
--------------CAAAATTTGTCCGAAATTCGGCCAAAATTCAAACAAGATTTGAAATAAAACAGAGCATAAATATAG
CAGCACAACGACCATCAGGATTGATCATATAAACTTCAGCAAATAAGCTCTAGGGATTAATAAAACTGCATCTGTCCAAC
TTAACAGGCACACATTAGTTATAAAGTGGCCTCCATCATAACCCTTAACAGTCCAACAACAGTTCAAGCATCACAGCATA
GTTCAGAGTTTAAATAGTCCGGTACAGCCAACAGACTTAAAGGATTACACATAGAAACAACAGCTCAAAAGACAACCATC
AAAGCATGACATTGAAACAGCAGCTCCAAGCTTGCCTACATCCAAAAGCTTCTTGATATCCTTGGTTATTCTTCAAATGC
CATTTCTGGTTTAGAGAAAACAGAGGAAGGGTCAGGATGGAGGTAGTTCTGCATCGGAATTATCTTCTGCCACTTTGTGC
ATAAAAAATAAAATGGACTAACAGGACAAGAAGTGGCTAGTAGAACAACAGTCAAATGTTATGCATGCTCATGAATCAAA
TAACAAATCTACTACAGCAATATAGTTTTTTATTCACCAAAAAGCTTCAGGAGCAAAGGTTAAATTCCTCCATATACTAG
AATGATGAATTCTAGTTCATAGTTTGTACTCCAGCACAACAAAACTCTTAAGGATACAAAGAAAGCGACATAGACACAAA
CAGCCCATTGTTGGCTTGGACTAGCCATTTGTCAATTGTCATACAGAAGGAAAATCCACGGTGAAAAATGTGAATCAAAA
ATCATGCATAAGCTCAAACATATTACAAGATAAATACAGTGGTTAATATACCTACAAAACAGCAGCTCCAAGCTTGCATA
CATCCAAAAGCTTCTTGATATCCTTAGTTCTTCATGTGGCATTTGTGGTTTAGAGAAAACAAAGAAAGGATCAGGATGGA
TGTAGTTCAACACCAGAATTTTCTTCTTCCACTTTGTGCATAATAAAATAAAATGGACTAACAGGGAAGTGTCTAGTGCA
ACAATAGACTGAAACTGCATACACGTACTGAAACTGCATCAAGAACATCTGTACCTTCCCAATCAAGTGGCCGCCCTCCA
TGCTGCTGCTGCCGCGTGCTACTGCCTCCGTTGAACTGGTCGGCTCGCGCACCATCATCTCCGATGCCGCAGCCGCCGAG
CACCATGCTGCAGTCTTGGAGAAGCAAAGGACAGGAAGTGGATGGTGTGGAGGTGAGGAATATGGAGGAGGGCTGGAGAA
GTGAGCGCCTTGGCCGGAGCTGTGGAGGAGGGCGGGGAGATTGGGTGGAAGCGCTCGCGCAGCGGCGGCACCGCACACAG
GAGGAGGGACAGAAAACGAGTGATTCTAGGGTTAGGCTGTTGTGTTCGTGGTTTTGTCTCAGCGCAAGCCTAACCGGAAG
GCTCTCGAAGCTGGGCCGGGCCAAAAAAATCAAACTGGGCCAAATTATTCGGCCGATAGGCCCATAAATCGGCCCCTAGC
GAGACGGCCGAAATTCGGCCGAAATACGTTTTTTTCGGCCGAAAATCAAAACGCAGATCTGGACCCAGAGACGAGGCAGA
CCGTGGAGAAGATGATGTTCGACCAGCGCCAGAAGCAGATGGGCCTGCCCACCAGCGAGGAGATGCAGAACCAGGACATG
CTCAAGAAACTCAAGTCCTAGTACCCGGACATGGACTTCTCCGGGATGAAGATGCCTTGT-----------------TGA
G-------TTGGAGGATCCACGACGATGAATTCAGAAG-ATTTTAGATGGAGAAATCGCTT----CTACGTACCGTATAG
TACT----------------------------------------------------------------------------
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>chr3A_1186
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-----------------GCCAGAGGTCAAACTCTCCGTCCCCGTTCCTCCAGGAACAAAGGCGAGGTCCGTCGTCTGCGA
GATCAAGAAGGACCATCTCAATGTCGGGTTCAAGGGCCAGCCTCCGATCATCGATGTAAGAAGCATCAAA------CTAT
CAACTATGTACACAACAGTTCACCTTGTCCTTTAT----GTCTATAAAATCTCTTGCTGATGCAGTATTAATTCGTCTC-
-----TTACTAGGGTGAGCTGCACAAGCCAGTTTAAGGTCGAAGACTGCTTCTGGAG-------GACGGGAGGTTGTTGT
CCATACTGCTGACCAAGCGTAATCGTAGCGAGTGGTGGAAGTCTGTGATCAATGATGTTCAGGAGATCGACACCCAGCTT
GCCGAATCTGAGAGCAGCAAGCTCTCC-----------------------------------------------------
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-------------------------------------------------------GATCTGGACCCCGAGACCAGGCAGA
CCGTGGAGAAGATGATGTTCGACCAGCGGCAAAAGCAGATGGGTTTGCCCACGAGCCAGGAGATGCAGAACCAGGACATG
CTCAAGAAACTCAAGTCCCAGTACCCGAACATGGACTTCTCAGGGATGAAGCTGCCTTCCTAAGGTT-GTCTC----TTA
GCTGGAGCTTGGAGGATCTAAGGCGAT-AATGCGGAAG-ATTTTAGATGGAGAAATCGCTT----GTAC---CTTAATTA
GTA--G-----TTTCTATTTGGGTGTCATTGTATTTTA-GTGTCTGTTTAT-----------------------------
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---------------------------------------------
>SNPs
---S----------------------------------------------------------------------------
-------------------------------------------------S------------------------------
---------------------S--------S--S-------S-----------S----------S---------------
---------S------S--SS---SSS-S------S--SS------------S---S---------------------SS
SSSSSSSSSSSSSSSS----S----------------------S----------SS-------------------S----
S----------S----------------------------------------S---------------------------
----------------------S------------------S-----------S-------S---S------S-------
--S-SSS--------------------------------------------------------------S-S--------
S-S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
---S-S-S---------------------------S--------------------------------------------
----S-SS------------------------------------------------------------------------
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---------------------------------------------------------------------S----------
----------S------------------------S-----S------------S----------S--------------
-----------------S-----------------S-----------------------------------------S--
--------------------------------------------------------------------------------
---------------------------------------S----S-----------------------S-----------
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------------------------------------------------------------------------S-------
-------------------------------------------------------------S------------------
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-------------------------------------------------S-----S------------------------
--------------------------S---------------------------------------------S-------
----------S---------------------S-S--------------------S-SSS-SSSS---------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
---------------S-----------S----------------------------------------------------
------------------------------S------------------------S------------------------
-------------S---S---------------S----------------------------------------------
--------------S-S--S--------S---------------------------------------------------
---------------------------------------------------------------S-SSS------------
------------------SSSS---S-----S------------------------SS-------------S--------
---------------------S----------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S---------------------------------------------------S----
-----------------SSS---------------------------------------SS-------SS----------
------S---S--------S-----S------S---------------------S-----------------SSS-S-SS
SSSSSSSSSSSSSS--------S-S-S--S------------S-------------------S--------------S--
----SS------SS------S------------------------
>forward_330
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----------------------------------------------------------------------ACCCACCATC
AACCACCATC----------------------------------------------------------------------
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>reverse_4251
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----------CGAGGATCCAAGGCGATGAA--------------------------------------------------
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---------------------------------------------
