>input_sequence_72960
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ATGGCACTCGCACCACGACCACTGGCCACCACAGTTTTCGGCTGCCGGATGATGGCGGTCGTTCTGCAGGC
CGCAGCCTTGACTTGCGTTGTGCTCGCAGGCAACCTCTGGTTCTCGACATTCATGTATGCTACTATATCACCTCTCTGGC
TTCTTCTAGCTATCTGTTCAACCAACAC-----CACTTTGTCATGCAGATTCCTCAAGGCTATCCTGGCGGCGGAGCTGG
CCTTGAATGCGGCGCGACTGATCTACGACGCGGCGCAGGTCTTCTTCCAGAAACCGCTGCCGGCCTTCCGCTGTGAGATG
ATGGGGCTTGTCGCCGCTGACTGGGTACCGTATAGTAGCATCCTTTTTCATGCTCGCCGGCTCACGCAACCATATCTGTC
AACCTACGTGTGTGTGCATGCATGGATTGCAGGTGATTATGCTCCTCCTTTTCGCTGCTGGGTCGAGCTCCCTCGCTGTG
GAGGACTTCGTCGAGAACAACATGAGGCGTTGCGCGTTGCTGCAGCCCGGGACGTGCGAGCGGTACAAGGCCGCCGGCGT
ACTTACCCTGCTGGCGTGGGCTTTCACTGTCCCGGTGGCCTGCGTTATGCTCCGTCTGCAAAGGATCTGGGATGAAGACG
CCGCC---GCCGCTGATGCATGA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr6B_1_TraesCS6B01G211500
GATGATTTTTTTTTTCGAAATCGATGAACTTTTTTCTCATAACAAGAGTACGTACTATAGCAAACCGGTTGGTTTCCCTA
AAAAATCAGTACATACTCTAGCAAATTTTGGAGAGAAAAAGAAAAACGAGACAAGCGATCGAGCGAGCGGCTGGGGCCAG
CGAGCGTTGTTGGGCCTGACCAGGCAAGCGACGCAGCGGGCGCTGCGTTCGCCGCCACTGCAAAGGAGAATGCCACCGCA
AAGAAAAACGTTCCGGCCTTCTCTTCCTCGCTCGAACAGGTATACCCATCCCACAGCGCA--ATATCTCTCCCT--CTCT
CTCGTTCTGTTCCTCACGAAGCCCTCACCGCCGCCGTGCCCGCCCTCCCCCCCGCGTCGCCGGCCGGAACTGCTCTTCCG
CGTACAGATCCGGCCTTCCCAGGCCTTGTCCCTACGATTCCCGTACTCGCCGCCGCCGTTACCGCCGTAAGGG-------
--------------AGGAGCAGCGCACCCCCACGCCAATGACGGCCAAGACGCCCTCCCGAGCAGGAGCAGCATCCCGGC
GGCCGAGCCCCCTCCGCCAAACCTCAACGTGAGCTCCATTGCCTTCTTCACTATGTTCTGCATGGTAGT-TAGCATTTTT
GGGTCCTATAGGTTGTACTGTTGATGCAAATTGGGTGCTATGGCTGCTGAATGTGTAAATGTTTTGTTAGCTGTATAGTG
CTATATGTGTGAAAGCAACGTATGTGTGCACTAGGTTGCTGATGAATGTGCAATTTTTATTCGTACTGC-----------
TGAATGTGCTATATGTGTGAAAGCAACGTATATGTGTGCAAAAATTTTGGTGGCTATGTGTGCAT------------CAA
TTCTGCCATGTGTGTAGTAGGTTGCTGCTGAATGTGAGAAGCCAAGTTCAGAAGCCGAATCCGGGAAGTTTTAGAGAAGT
GGAGATCAGAACAGGCCTTAGGCACTCTGAGTCCTGACTCCCTTGCCAACCTGAGCGCTGCCAACATATTAAGCCGTGCA
CAGTTTTCGATGGCACTCGCACCACGACCACTGGCCACCACAGTTTTCGGCTGCCGGATGATGGCGGTCGTTCTGCAGGC
CGCAGCCTTGACTTGCGTTGTGCTCGCAGGCAACCTCTGGTTCTCGACATTCATGTATGCTACTATATCACCTCTCTGGC
TTCTTCTAGCTATCTGTTCAACCAACAC-----CACTTTGTCATGCAGATTCCTCAAGGCTATCCTGGCGGCGGAGCTGG
CCTTGAATGCGGCGCGACTGATCTACGACGCGGCGCAGGTCTTCTTCCAGAAACCGCTGCCGGCCTTCCGCTGTGAGATG
ATGGGGCTTGTCGCCGCTGACTGGGTACCGTATAGTAGCATCCTTTTTCATGCTCGCCGGCTCACGCAACCATATCTGTC
AACCTACGTGTGTGTGCATGCATGGATTGCAGGTGATTATGCTCCTCCTTTTCGCTGCTGGGTCGAGCTCCCTCGCTGTG
GAGGACTTCGTCGAGAACAACATGAGGCGTTGCGCGTTGCTGCAGCCCGGGACGTGCGAGCGGTACAAGGCCGCCGGCGT
ACTTACCCTGCTGGCGTGGGCTTTCACTGTCCCGGTGGCCTGCGTTATGCTCCGTCTGCAAAGGATCTGGGATGAAGACG
CCGCC---GCCGCTGATGCATGATGGGCGGTCAACTTCTACCTAAGAAAGTAAGCATGAGAGATTTATTTGATACTAGTA
CTTAG--TAAATAGTTTAGTTTGGCTACTATCGCTACGACGTCACCATGTGTACGTACGTGTAGACGTACTACCC-CC-T
ATGATTATGACTAGGAAACATGCCCATGCGTTGCAACGGGAAAGAAAAAACCTGTTGTTGCCGCCACCGCCCGCTCTGCC
TGTCACTTCGGCCAGGCCACATGGTACACATGCGCCAGGCCCAGCAGAGCCATTGGCCTTCGTCTCCCTCAGGTGGGAGT
AGA-GAAAGCATATGAAGAAGGATAAACTTGTGGA-ATTAGTCCGGATGCAGATATGCGGTGCCCATTCGATCATCCACT
CCTAATACCGATGACACCTATGCATGACGCAACCTTTCATAATGATAGGTATATAATGCAATTACTCTAAATTGTGTGCA
TTTCAAATCTTCCAATTTAAGGTTTTATACATTTTTCATAATCTTCCGGATGTAAAACTCACTTATT-TTTGAATTAACT
CCTTTTAAATACAAAACTTGATTTTGAAATTTGAAGAAGAGAAGCTATACTAAAAATTGCTAGAAATACTTCAGAATGTA
TTATTATGGTGTTGCATTGAACCAGGAAACCCTTATGAGAATTTCCTATATTTTATGTTGAATTTTGAA-CCTCCAAATA
ACTTAGATACATGATTTGTTGATTTGAAGCACAATACATATATA-AAAAGGAAATAGACCCATTGTTACCTGTTTGCCCC
AAAAGTAGCCATCGATCTAAAATCCATGAGAAAAAGATCCTGCCTCCATT-AATAAAATTATCCCAATTTAAAATCCATG
AAAAAAAAAT-CTTGCATCCATAAATAAATAAATAAAAATTCTCCCAGACCCCTCCTTTTCACAGGCAGCAGCTCGACCA
GCGCTAACATTGAC-------CCCCGGGCCCCAACCCAGAGCGCCGTAGCCACGTGGTGCGCACGAGGTCCCTTTCTCTC
A
>chr5A_223
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AAGGAGAATGCCACCGCC
AAGGAAAACGTTTCAGCCTTCTCTTCCTCGCTCGAACAGGTGTACCCATCCCACAGCGCACCATATCTCTTCCTCTCTCT
CTTGTTCTGTTCCTCACGAAACCCTCACCGCCGCCGCCGC--CCCCCCCTCCCCCGTCGCCGGCCGGAACTACTCTTCCG
CGTACAGATTCGGCCTTCCCAGGCCTTGTCCATCCGATTCCCTTACTCGCCGCCACCGTTCCCGCCGTAAGGGAGGAGCA
GCGACCCCATGGGAAGGAGCAGCGCACCCCCACGCCATTGACGGCCGAGACGCCCTCCCGAGCAGGAGCAGCATCCTGGC
GACCGAGCCCCCTCCCCCAAACCTCAACGTGTGCTCCCTTGCCTTCTTCCCTGTGTTTTGCATGGTAGTATAGCATTATT
GGGTCCTATAGGTTGTATTGTTGATGCAAATTGGGTGCTATGGCTGCATAATATGTAAATGTTTTGTTGGCTGTGTAGTG
CTATATGTGTGAAAGCAGCGTGTGTGTGCACTAGGTTGCTGATAATTGTGCAATTTTTATTCCTA---C-----------
TGAATGTGCTATATGTGTGAAAGCAACATATATGTGTGCAAAAAATTTGGTGGCTCTGTAGTGCTATATGTGTGCAACAA
TTCTGCCATGTGTGTAGTAGGTTGCTGCTGAATGTG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr4D_224
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AGGAGAATGCCACCGCC
AAGGAAAACGCTTCGGCCTTCTCTTCCTCGCTCGAACAGGTTTACCCATCCCACAACGCACCATATCTCTTCCTCTCTCT
CTCGTTCTGGTCCTCACAAAACCCTCACCGCCGCCGCCCC--CCCT-----CCCCGTCGCTAGCCGGAACTGCTCTTCCC
CGTACAGATTCGGCCTTCCCAGGCCTTGTCCCTCTGATTCCCTTACTCACCGCCGCCGCTCCCGCCGTAAGGGAGGAGCA
GCGACCCCATGGGAAGGAGCAGCGCACCCCCATGCCATTGACGGCCGAGACGCCGTCCCGAGCAGGAGCAGCATCCCAGC
GACCGAGCCCCCTCCCCCAAACCTCAACGTGAGCTCCCTTGCCTTCTTCGCTACGTTCTGCATGGTAGTATAGCATTATT
GAATCCTATAGGTTGTACTCTTGATGCAAACTGGGTGCTATGGCTGCAGAATGTGTAAATGTTTTGTTGGTTGTGTAGTG
CTATATGTGTGAAAGCAGCGTATGTGTGCACTAGGTTGCTGATAAATGTGCAATTTTGATTCCTA---CGGAATGGCAGC
TGAATGTGCTATATGTGTGAAAGCAACATATATGTGTGCAAAAAATTAGGTGGCCCAGTAGTGCTATATGTGTGCAACAA
TTCTGCCATGTGTGTAGTAGGTTGCTGCTGAATGTG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr6A_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TCGATGGCACTGGCGCCACGACCACTGGCCACCACAGTTTTCGTCTGCCGGATGATGGCGGTCGTTCTGCAGGC
CGCGGCCTTGACTTGCGTTGTGCTCGCAGGCGACCTCTGGTTCTCGACGTTCATGTATGCTACTATGCCACCTCTCTGGC
TTCTTCTAGCTATCTGTTCAACCAACACCACTTCACTTTGGCATGCAGATTCCTCAAAGCTCTCCTGGCGGCGGAGCTGG
CCTTGAACGCGGCGCGACTGATCTACGACGCGGCGCAGGTCTTCTTCCAGAAACCGCTGCCGGCCTTCCGCTGGCAGATG
ATGGGGCTCGTCGCCGCTGACTGGGTACCGTCCAGTAGTATTCTCTTTCGTGCTCGCCGGCTCGCGCAACCATATCTGTC
GACCTACGAGTGCGTGCATGCATGGATTGCAGGTGATGATGCTCCTCCTTTCCGCTGCTGGGTCGAGCTCCCTCGCCGTG
GAGGACTTCGTCCAGAACAACATGAGGCGTTGCGCGTGGCTGCATCCCGGGACGTGCGAGCGGTACAAGGCCTCCGGCGT
ACTTACCTTGCTGGCGTGGGCTTTCACTGCTCTGGTCGCCTGCGTTATGCTCCGTCTGCAAAGGATCTGGGATGAAGACG
CCGCCGCCGCCGCCGATGCGTGATGGGCGGTCAACTTCTACC--------TAAGCATGAGAGATTTATTTGATACTAGAC
TG--G--TAAATAGTTTAGTTCGGCTACTATCGCTACGACGTCACAATGTGTACGTACGTGTAGACGTACTACCC-CCCT
ATGATTATGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr6D_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TCGATGGCACTGGCGCCACGACCACTGGCCACCATAGTTTTCGTCTGCCAGATGATGGCGGTCGTTCTGCAGGC
CACGACCTTGACTTGCGTTGTGCTCGCAGGCGACCTCTGGTTCTAGACGTTCCTGTATGCTACTATACCACCTCTCTGGC
CTCTTCTAGCCATCTGTTCAACCAACACCACTTCACTTTGGCATGTAGATTCCTCAAGGCTCTCCTGGCGGCGGAGCTGG
CCTTGAACACGGCACGACTGATCTACGAAGCGGCGCAGGTCTTCTTCCAGAAACTGTTGTCGGCCTTCCGCTGGCAGATG
ATGGGGCTCGTCGCCGCTGACTAGGTACCGTACAGTAGTATTCTCTTTCATGCTCGCTGGCTCGCACAAACATATATGTC
GTCCTACGTGTGCGTGCATGCATGGATTGCAAGTGATGATGCTCCTCCTTTTCACTATTGGGTCGAGCTCCCTCGCCGTG
GAGGACTTCATCGAGAACAACATGAGGCATTGCGCGTGGCTGAAGCCCGAGACGTGCGAGCGGTACAAGGCCTCCGGCGT
ACTTACCTTGCTGGCGTGGGCTTTCACTGCCCTGGTCGCCTGTGTTATGCTTCGTCAGCAAAGGATCTGGGATGAAGACG
CCGCC---ACCGCTGATGCATGATGGGCAGTCAACTTCTACC--------TAAGCATGAGAGATTTATTTGATACTAGTA
GTAGTAATAAATAGTTTAGTTTGGCTACTATCGCTATGACGTCGCCATGTGTACGTACG-GTAGACGTACTACCCTCCCT
ATGATT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr3A_1914
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GGCCTTTGTCTCCTTCGGGTGGGAGT
AGA-GGAAGCATATGAAGAAGGATAAACTTGTGGGGATTAGTCAGGATGAAGATATGAGGTGCCCATTCGATCATCCACT
CCTAATACCGATGACAT-------------AACCTTTCATAATAATAGGTATGTAATACAATTACTTTGAATTGTGTGCA
TTTCAAATCTTCCAATATAAGGTTTTCTACATTTTTCATAATCTTTGGGATGCAAAACTCACTTATTTTTTAATTAAACC
CCTTTCAAATATAAAACTTGATTTTGAATTTTGGAGAAGAAAAGTTATACTAAAAATTGCTAGAAATACTTCAGAATGTA
TTATTATGGTGCTGCACTGAACCAGAAAACCCTTATCAGAATTTCCTGTATTTTATGTTGAATTT-GAA-CCTCCAAATA
ACTTAGATACGTGATTTGTTGATTTGAAGCAGAATACATATATA-AAAAGGAAGTAGACCC------ACCTGTTTGCCCC
AAAAGTAGCCACTGATCTAAAATCCATGAGAAAAAGATCCTGCCTCCATTTAATAAAATTCTCCCAATCTAAA-TCCATG
AAAAAAAT-T-CC---ATCCATAATTATT----------TTCGCCCAGACCCCTCTTTTTCACAGGCAGTAGCTCGACCG
GTGCTAACATGGAC-------CCCCGGGCCGCGGCCCATAGTGTTGTAGCCGCGTGGTGCGCACGAGATCCCTTTTTCTC
A
>chr7D_1916
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CCTTCGTCTCCATCGGGTGAGAGT
AGAGGGAAGCATATGAAGAAGGATAAACTTGTGGGGATTAGACAGGATGCAGATCTGCGGTGCCCATTCGATCATCCACT
CATAATACCGATGACACCTATGCATGACACAACCTTTCATAATAATAGGTATATAATGCAATTACTTTGAATAGTGTGCA
TTTCAAATCTTCTAATATAAGGTTTTATACATTTTTCATAATCTTTGGAATGCAAAACTCACATATTTTTAAATTAAACT
CCTTTTAAATACAAAACTTAATTTTGAATTTTG--GAAGAAAAGTTATACTAAAAATTGCTAGAAATACTTCAGAATGTA
TTATTATGGTGTTGCATTGAACCAGGAAACCCTTACGAGAATTTCCTCTATTTTATGTTGAATTTTGAAACCTCCAAATA
ACTTGGATACATGATTTGTTGATTTGAAGCAAAATACATATATA-AAAAGGAAGTAGGCTCATCGTTACCTTTTTGCCCC
AAAAGTAGCCATCGATCTAAAATCCATGAGAAAAAGATCCTGCCTCCATT-AATAAAATTCTCCCAATCTAAAATTCATG
AAAAAAAATT-CCTGCATCCATAAAAAAAA--C--------CTATCATACCCCTCTTTTTCACAGGGAGCAGCTCGACCG
GCGCTAACATTGAC-------CCCCGGGCCCCGGCCCAGAGGGCCGTAACCGCGTGGTGCGCACAAGATCCTTTTTCTCA
-
>chr5D_1916
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CCTTCGTCTCCATCGGGTGAGAGT
AGAGGGAAGCGTATGAAGAAGGATAAACTTGTGGGGATTAGACAGGATGCAGATCTGCGGTGCCCATTCGATCATCCACT
CATAATACCGATGACACCTATGCATGACACAACCTTTCATAATAATAGGTATATAATGCAATTACTTTGAATTGTGTGCA
TTTCAAATCTTCTAATATAAGGTTTTATACATTTTTCATAATCTTTGGAATGCAAAACTCACATATTTTTAAATTAAACT
CCTTTTAAATACAAAACTTAATTTTGAATTTTG--GAAGAAAAGTTATACTAAAAATTGCTAGAAATACTTCAGAATGTA
TTATTATGGTGTTGCATTGAACCAGGAAACCCTTATGAGAATTTGCTCTATTTTATGTTGAATTTTGAAACCTCCAAATA
ACTTGGATACATGATTTGTTGATTTGAAGCAAAATACATATATA-AAAAGGAAGTAGGCTCATCGTTACCTTTTTGCCCG
AAAAGTAGCCATCGATCTAAAATCCATGAGAAAAAGATCCTGCCTCCATT-AATAAAATTCTCCCAATCTAAAATTCATG
AAAAAAAA-T-CCTGCATCCATAAAAAAAA--C--------CTATCAGACCCCTCTTTTTCACAGGCAGCAGCTCGACCG
GCGCTAACATTGACCCCCGGGCCCCGGGCCCCGGCCCAGAGGGCCGTAACCGCGTGGTGCGCACAAGATCCTTTTTCTCA
-
>chr2A_1916
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CCTTTGTCTCTATCGGGTGAGAGT
AGA-GGAAGCATATGAAGAAGGATAAAGTTGTGGGGATTAGACAGGATGCAGATCTGTGGTGCCCATTCGATCATCCACT
CATAATACCGATGACACCTATGCATGACACAACCTTTCATAATAATAGGTATATAATGCAATTAATTTGAATTGTGTGCA
TTTCAAATCTTCTAATATAAGGTTTTATACATTTTCCATAATCTTCAGAATGCAAAAATCACATATTTTTGAATTAAACT
CCTTTTAAATACAAAACTTGATTTTGAATTTTG--GAAGAAAAGTTATACTAAAAATTGCTAAAAATACTTCAGAATGTA
TTATTATGGTGTTGCATTGAACCAGGAAACCCTTATGAGAATTTCCTCTATTTTATATTGAATTTTG-AACCTCCAAATA
ACTTGGATACATGATTTGTTGATTTGAAGCAAAATACATATATAGAAAAGGAAGTAGGCTCATCGTTACCTGTTTGCCCC
AAAAGTAGCCATTGATCTAAAATTCATGAGAAAAAGATCCTACCTCCATT-AATAAAATTCTCCCAATCTAAAATTCATG
AAAAAAAT-T-CCTGCATCCATAAAAA-AAACC--------CTACCATACCCCTCTTTTTCACAGGCAGTAGCTCGATTG
GCGCTAACATTGAC-------CCTCGGGCCCCGGCCCAGAGGGCCGTAACCGCGTGGTGCGCACGAGATCCTTTTTCTCA
-
>chr2A_1916
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CCTTTGTCTCTATCGGGTGAGAGT
AGA-GGAAGCATATGAAGAAGGATGAAGTTGTGGGGATTAGACAGGATGTAGATCTGTGGTGCCCATTCGATCATCCACT
CATAATACCGATGACACATATGCATGACACAACCTTTCATAATAATAGATATATAATGCAATTACTTTGAATTGTGTGCA
TTTCAAATCTTCTAATATAAGGTTTTATACATTTTCCATAATCTTCGGAATGCAAAAATCACATATTTTTGAATTAAACT
CCTTTTAAATACAAAACTTGATTTTGAATTTTG--GAAGAAAAGTTATACTAAAAATTGCTAGAAATACTTCAGAATGTA
CTATTATGGTGTTGCATTGAACCAGGAAACCCTTATGAGAATTTCCTCTATATTATATTGAATTTTG-AACCTCCAAATA
ACTTGGATACATGATTTGTTGATTTGAAGCAAAATACATATATA-AAAAGGAAGTAGGCTCATCGTTACCGGTTTGCCCC
AAAAGTAGCCATCGATCTAAAATTCATGAGAAAAAGATCCTACCTCCATT-AATAAAATTCTCCCAATCTAAAATTCATG
AAAAAAAT-T-CCTGCATCCATAAAAA-AA--C--------CTACCAGACCCCTCTTTTTCACACGCAATAGCTCGATCG
GCGCTAACATTGAC-------CCTCGGGCCCCGGCCCACAGGGCCGTAACCGCATGGTGCGCACGAGATCCTTTTTCTCA
-
>chr6D_1920
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CGTCTCCATCGGGTGAGAGT
AGAGGGAAGCATATGAAGAAGGATAAACTTGTGGGGATTAGACAGGATGCAGATCTGCGGTGCCCATTCGATCATTCACT
CATAATACCGATGACACCTATGCATGACACAACCTTTCATAATAATAGGTATATAATGCAATTACTTTGAATTGTGTGCA
TTTCAAATCTTCTAATATAAGGTTTTATACATTTCTCATAATCTTTGGAATGCAAAACTCACATATTTTTAAATTAAACT
CCTTTTAAATACAAAACTTAAGTTTGAATTTTG--GAAGAAAAGTTATACTAAAAATTGTTAGAAATACTTCAGAATGTA
TTATTATGGTGTTGCATTGAACCAGGAAACCCTTATGAGAATTTCCTCTATTTTATGTTGAATTTTGAAACCTCCAAATA
ACTTGGATACATGATTTGTTGATTTGAAGCAAAACACATATATA-AAAAGGAAGTAGGCTCATCGTTACCTTTTTGCCCC
AAAAGTAGCCATCGATCTAAAATCCATGAGAAAAAGATCTTGCCTCCATT-AATAAAATTCTCCCAATCTAAAATTCATG
AAAAAAAT-T-CCTGCATCCATAAAAAAAA--C--------CTATCAGACCCCTCTTTTTCACAGGCAGCAGCTCGACCG
GCGCTAACATTGAC-------CCCCGGGCCCCGGCCCAGAGGGCGGTAACCACTAGGTGCGCACAAGATCCTTTTTCTCA
-
>chr3D_1938
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GT
AGA-GGAAGCATATGAAGAAGGATAAACTTGTGGGGATTAGTCGGGATGTAGATCTGCGGTGCCCATTCGATCATCCACT
TCTAATACCGATGACACCTATGCATGACACAACCTTTCATAATAATAGGTATATAATGCAATTACTTTGAATTGTCTGCA
TTTCAAATCTCCCAATGTAAGGTTTTGTACATTTTTCATGATCTTCGGGATGCAAAAAACACTTATTTTTGAATTAAACT
CCTTTTAAATACAAAACTTGATTTTGAATTTTGGAGAAGAAAAGTTATACTAAAAAT-GCTAGAAATACTTCAGAATGTA
TTATTATGGTGTTGCATTTAACCTGGAGACCCTTATGAGAATTTCCTCTATTTTATGTTGAATTTTGA-ACCTCCAAATA
ACTTAGATACATGATTTGTTGATTTGAAGCAGAAAACC--TATA-AAAAGGAAGTAGACTCATCTTTACCTTTTTGCCCC
CAAAGTAGCCATCGATCTAAAATCCATGAGAAAAAGATCCTGCCTCTACT-AATAAAATTCTCCCAATCTAAAATTCATG
AAAAAAAA-T-CATGCATCCATAAAAAAAAAT------------------------------------------------
--------------------------------------------------------------------------------
-
>chr2A_1984
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGCAGATCTACGGTGCCCATTCGATCATCCATT
CATAATACCGATGACACCTATGCATGACACAACCTTTCATAATAATAGGTATATAATGCAATTACTTTGAATTGTATGCA
TTTCAAATCTTCTAATATAAGGTTCTATACATTTTTCATAATCTTCGGAATGCAAAACTCACATATTTTTGAATTAAACT
CCTTCTAAATACAAAACTTGATTTTGAATTTTG--GAAGAAAAGTTATACTAAAAATTGCTAGAAATACTTCAGAATGTA
TTATTATGGTGTTGCATTGAACCAGGAAACCCTTATGAGAATTTCCTCTATTTTATGTTGAATTTTGA-ACCTCCAAATA
ACTTGGATACATGATCTGCA------------------------------------------------------TGCCCC
AAAAGTAGCCATCGATCTAAAATCCATGAGAAAAAGATCCTGCCTCCATT-AATAAAATTCTGCCAATCTAAAATTCATG
AAAAAAAA-TTCCTGCATCCATAAAAAAAAAA---------CTACCAGACCCCTCTTTTTCACAGGGAGCAGCTCGACCG
GCGCTAACATTGAC-------CCCCGGGCCCCGACCCAGAGGGCCATAACCACGTGGTGCGCACGAGATCCTTTTTCTCA
-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S
---S--------S----------------------------S----------------------------S---------
--------------------S---------------SS--SS-------S---S--------------------------
---------S-----------------------S--------S-----------------S-------------------
-------------------------------------S--------S---------------------------------
-S-------------S---------------------S-----------S---------------------------S--
-----------------------------------------------S--------------------S-----S-----
-----------------S-------------------------S------------------S--SSS------------
---------------------------S----------------S----------S---SSSSS----------------
------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----------S--S----------------------------S------------------------------
---S---------------------------S----------------S------------------S------------
----------------------------------------S--------------------S------------------
-------S-----------------------------------------------------------------SS-----
--------S-----------------------S-----S--S--S------------------S----------------
S-----------S------------------------S--------------------------------------S---
-------------------------------------S----------------------------------S-------
-------S---------------------S--S---S-------------------------------------------
------------------------------------------SSSSSSSS------------------------------
S-SS----------------------------------------------------------------------------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--S---------
-----S----------------------------S--------S------------------------------------
----------------------------S--------------S----------------------S-S-----------
----------------S-----------------------------S-----S------------------S-S-S----
----------------------------S----S------S---S-----------------------------------
-----------------------------------------------S--------------------------------
-------------------------------S---------------------S---------S----------------
------------------------------------------------------------S-------S-----------
--------S---S----------------S--SSSSSSS----------------S-----------------------S
--------------------------------S--------S-------------------------S-------S----
-
>forward_688
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AATTGGGTGCTATGGCTGCT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_1932
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------CCAGGCCACATGGTACACAT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
