>input_sequence_72931
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-------------------------------------------ATGGAAAGCAAACATTTCATCAAGAGCGTGATCATGT
GTGCACTCATACTGGGA---------CTTGTCCCGGAACAAATCCAAGTAGCAGAGGGCAAGAGCTGCTGCAGAGACACC
AGATCAAGAAACTGTTACAACGTGTGCGGTTTTAGGTACCCCAGTAGCTCCTGCTCAAAAATGTGTGGCTGTGTGCTCA-
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-----------------CAAGGGACCCCACATGTCCCAGGGAATACCCTAACCTCAACCTTCTCCCTAGCTCAGCTGGTA
CGTAAACCCAAGCCACTCTCTCTGTTTTCTCTGTATTATTTTGCTCCCAGATGCATGGAAGTTGCAATTAA-----GGTT
GACTAATGCTTGCTGCTGCTGTTGCG------------------------------------------------------
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----------------------------------------------------------------------------GAGG
AAGAACCAGATGCCGTTGAGTACTGCAAACTAGGATGCAGGCTCTCAGTCTGTGACAACGTCAACTCAGGTAGTAGTATA
TCTTAATTAATTCATCATCTGTATATATATAACTTTCAATTTATCATAAGAGGAAAAGTTTTTTTTTTCGGTTTGGAATG
AACATTGCGCATATCTTGATCTTGTCATCAGCTGAGCTTCGCGAAGACATGAAAGTCGGCGTGGAGCGCTGC--------
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-------------------------------------------------------------------------------G
GCGATGCGTGCGGCCGGTTCTGCAACGATGCCACCAACATTGCATCCGTCGATGCTTGA---------------------
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----------------------------------------------------------------
>chr5B_1_TraesCS5B01G228600
AGATTTGCTTCGGCTTGACAGAATGCATCCTAACTAGATCTACAAATACATCAGAACAAAATCCATTTACCGAACAGATC
CACAAATAAAAAAAA---ATCACATAAGCACAAGTACTCGCTCTGCTCGCCTAGCTGATGTCCAGCACACACTCATGAAC
TGTAAATGAAGGCACGGATAGGGATAATAAGTACCCGCAAAAAAAAAGAGGGGTAATAAGAACAAATAAGAG--------
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-----------------------------------------------------------AGAAGAAAAATGAACAAGAAC
ACGGAAGCTAATGAGGATGGAGAGTAGGCATCTTCTGGGCGAGGTACTATCGACGAGGACAACCGGTCGAGTTGCCACGT
ATCCGTCCACAACGCAAGAGTAATAAGAGCATCTATAATAGTCTGTATGATGGATTCGTTGGTATAAAGTCCACGTCAGC
AGCCAACAGTATATCATACAAGTTCTTCAATGAAGTGTATGTTAGTCTGATGGGCCACACACATTAAATCAATGTAAATA
AATTGATGGCCAGCACCCCGAGAGAAGGAAATTGGCTGCCGCAGCTCACACCAGGTCTAGCTAGGGCCCACATAAATTAA
TGTAATTACTCAGAGCTTGTGCCCACAACGTTGGTTCAGGATCATACGGTCACACACTCTCTCTTCTTTTATTTTAGGCC
ACCTCATCAAAAGAGTCTACATGGCAGATTTACCAACTATTATCACACGATCATTGGAGATGCCCTAAAGTAAATAAAGT
AAAATAGACCTAAGAACATCGTAGTCGGCCATGACACAAGAGGGTGCACGAGAAAACTTAATGCACGAGGCCGGTAGAAG
TTAGCGGGCACCGCATGATCGCCTAGGGTACGCAGCGCACACGTAGATGATCTCAACCGTGTACGTGGCTCTCAGCAGAG
CACGGCTCATTTATGCACATCACTTCTTAATAATCACTGCCCATGCGGAGCATCGTCTCCTATAAATTGGGGCCATGCAA
GTC-------------TGCGTTTTCGCAGCAGGGAAGGCAGCCATGGAAAGCAAACATTTCATCAAGAGCGTGATCATGT
GTGCACTCATACTGGGA---------CTTGTCCCGGAACAAATCCAAGTAGCAGAGGGCAAGAGCTGCTGCAGAGACACC
AGATCAAGAAACTGTTACAACGTGTGCGGTTTTAGGTACCCCAGTAGCTCCTGCTCAAAAATGTGTGGCTGTGTGCTCA-
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-----------------CAAGGGACCCCACATGTCCCAGGGAATACCCTAACCTCAACCTTCTCCCTAGCTCAGCTGGTA
CGTAAACCCAAGCCACTCTCTCTGTTTTCTCTGTATTATTTTGCTCCCAGATGCATGGAAGTTGCAATTAA-----GGTT
GACTAATGCTTGCTGCTGCTGTTGCG------------------------------------------------------
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----------------------------------------------------------------------------GAGG
AAGAACCAGATGCCGTTGAGTACTGCAAACTAGGATGCAGGCTCTCAGTCTGTGACAACGTCAACTCAGGTAGTAGTATA
TCTTAATTAATTCATCATCTGTATATATATAACTTTCAATTTATCATAAGAGGAAAAGTTTTTTTTTTCGGTTTGGAATG
AACATTGCGCATATCTTGATCTTGTCATCAGCTGAGCTTCGCGAAGACATGAAAGTCGGCGTGGAGCGCTGC--------
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-------------------------------------------------------------------------------G
GCGATGCGTGCGGCCGGTTCTGCAACGATGCCACCAACATTGCATCCGTCGATGCTTGATCATGTATGAGCATGCGCTGA
GATCCCG------------GTGGCTTACCTTCTTCGTCGTTGCTGCCGCCTCAGCCGTTATCTAGTTCTTGCTTTAGCTA
TGATA---------------------------------------------------------------------------
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---------------TGTTAGCCTTTGATGCCAACTACTGTATGTTGCACCCTAGTATCTGAAATGTTGTGTGGGTGCCC
CGGTTCAGCTGGTGTGTGCTCTGCTTCTATTTTGGGATCTTGCATGATCC-TTTGAGGTGCTGGGCTGGGGTTCGCCGTA
ATCCCCAGTCATGTAAGATAGTATGTCGTGTGTGGGGTAACAAAAACCCTAGTAGTAGTTGTGAACCTTGGTTTCTCTTA
GGCCTTGTTCGGTTGCGGGTGAATCCGAGTGGATTGAAGGGGTTTGAGGGGGATTTAAACCTCTTAACCGAACAAAGCCT
TAATGAAATTGGAGAGGGAGGCCTCTCTTTTGATCAAGAAAAAGAAATGCACTGAGATCCCACGTTGATCCTTTATGTAG
TATATCTGTACATACTTGAGGAAGATCTGCCATGAGTTCCAG-AATTTACTTCGTTCACACTCAGTAGAGGAGCACTTCT
AAACTTTATCTTCTACTCCCTCCGTTCATTATTATAAGATGTTTTGGATATTTCAATATGGACTGCATATGAACTGAAAT
GAGTGAATAAATGCACTAATAGACGGCTATATACATCTGATTCAGAAAAAAGGTTAGAACATCTTATAGTGGTGAACAGG
GGG----AGTAGTATTTAGTAAACCGGAGAAGCTCCGGTGATTGCCTTAACTTATTATATGTTTCTACATTGGCCACAAA
GCCACATCATATTGCGCTGCCCAGCTTAGATCACAGGGAGCACCAAAACTATTCTCAACAC-----------------CA
GCCATTCCTCCGAACTACTTCGCTCACGGTTCCTGCATCGACTTCGTCGTACAGAATCGCACAGCGTCAGAGACCGCGAG
GAATATATTGCTGCTTCCAATGTGCTCGGTGAGCTTCGACGCTTGCAGTTTTTCTATGACGACG
>chr5D_5
----TTGCTTCGGCTTCGCAGAATGCATCCTAACTAGATCTACAAATACAGCAAAACTAAATCCATCTACCGAACAGGTC
CGCAAATAATAAAAAAATATCAAATAAGCACAAGTACTCGCTCTGCTCGCCTAGCCGATGTCCAGCACACACTCATGAAC
TGTAAACGAAGGCACAGGAG---------------------------------------GAACATATAAGAGAGAAGAAG
AAGAAGAAGAAAATTTTTCCTAGATGCTAACTTGTGCCATAGAATTGCTGAGACGCAGCCGCCTCCTCCTCAAAAAAGGT
CTAGGGTTCCCCCAACTCCTGCCAGCGATGCCGTTGTCGGACGTCGGTCTCCATCGTCTGCGGTGGCCTTAGGGCCATGG
CATTGCAGTGGATCTCTGCCCTTGCCTGCGGGAGGGCTCTGTTTTCAGTTGTTTTTTCGCGTTGTTTTAGGGTTTGTGTC
CTGCTAAGGAAGACGAGACGGCGACGGCTCTCTAAAGATGGAATAAGGTTCTCCCCGTGTAGCCCCTGTCCCGATGGAGC
ATCATCGGTGGGCGTGTGGAGGTGTGCCTCTGGCGGATCTGTCCTTGGTAGATTTGCTCGGATCTGGTCGTAGTTCGTCT
ATGTTCATGTGTTTTCAGGTTGGATCATTCCGATCTATGCTATTCTTTATCGGCGGCGGTTGCTGTTCTGTTGCGCTGGT
CCTATGGGAACTTAGTACGACGATCTTCCGACTGTCTACTACAACAAGTTTTGTCCGGCTCTTGTGAGGGAGGGGCAATG
ACGGCGGCGCGCCTTCGGCTTAGTTCGGTGCTTGTAGTCGTCGCTAGGTGGTCTACGGATCTGGATGTAATTTTATTATT
TTTGGTGTTCATTGTACTGTCATAATTGATGATGAATCGATCGGAAGTTTTGCCTTAAAAAAAGAAAAAAGAAAAAGAAC
ACGGAAGCTAATGAGG----------------------GCGAGGTACCATCGACGAGGACAACGGGTCGAGTGGCTACGT
ATCTGTCCAAAACACAAGAG------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TAAAGT
AAAATACACCTAAAAACATCGTAGTCGGCCATAACACAAGAGGGTGCACGTGAAAACTTAATGCACGAGGCAGGTAGGAG
TTAGCGGGCACCGCATGATCGCGTAGGGTACGCATCGCACACGTAGACGATCTCAACCGTGTACGTGGCTCTCAGCAGAG
CACGGCTCATTTATGCACATCACTTCTTAATAATCACTGCCCATGCGGAGCATCGTCTCCTATAAATTGGGGCCATA---
-CGAGTCTTGTTCCTGTGCGTTTTCGCAGCAGGGAAGGCAGCCATGGAGAGCAAGCATT---TCAAGAGCGTGATCATGT
GTGCACTCATACTGGGA---------CTTGTCCCGGGACAAATCCAAGTGGTAGAGGGCAAGAGCTGCTGCAAGGGCAAC
AGCTCAAGAAACTGTTACAATGTGTGCCGTCTTATAGCATCTTCAGCCGCGTCCTCAGAAAGGCCTTCCCAGGCGATTTT
TTCACGCCAGTGTCGAAAAATCGGCCCAGTCGCGCCCCGGGAGCCCGATTTTTGCCGGCCTGGGCCGAAATTAGCGCCGG
CGGACCCAGGTCGAACCCGCCGCGCTGGGGCGCCGGGGCGAGCGGTTTTGGCGCGAAAGAGCCGCGGGCCCGGGCGCGTC
AGCGACACCGCGCGTCGTCTTCCCCCCAATGCCTCGGTTTCCCGCGGGGAATCAATGGCAAGGCTGCCGCCGGTCAGCCT
TATCATTGATTCCTCACGGGCGGCGCGTCACGGGGCGGCGCGCCGACGCCTCCCCTCCCTCGCACGCGTACACACGGGCG
CGGTGCGGCTATATAAGCAGGTGGCCTCCCTCGCCTCTGGCCACACCAGCCCTAGCCCTAGCCGCCGAGCTCTACCTCTT
CCGAGCGCCGCCGTCGAGCCCTCCCTCTCCCTCCCTCCCTCTCCCGATGGCCGATCGATTCCCCGGAGATGAGGCGGCGG
CCAACGGCTTCGGCCGTCGCTCGCTCCGCGAACAGGAGTCTTGGCTCCTGTTCCAGGCGAACATCCCGGCGTCGCCGGAC
ATGCGCGTCGGGCCGACGGGGTGGAGACTCAGCAACGGGGGAGCGCCCATTCCCCCGTTGCCCGACGCCGTGGCGAAACC
GTCCTACTTCGCCGACGAGGTCGAGGTCGTGCGCGCCTCTCTCACCGACGCCCAACTCTCCCTCCCCGAGTACACCGCCG
ACAACCAAGCGGCGTGGACGGCATACTTCCAGCGCCGGCAACAGCAGAGGATGGCGTCCACCAACGGCGCGCCGGTGGTG
GCCGGCCTGAAGAACAGCGAGGGACGCCACCTGTGGTGGGGTGTCCCCGGCCGCACCCTCGAGGGTGTTTTGACGTACCT
CGAAGGCGGCAACGACCCGCCGTTGGCATACCCCCCGGCGAGGGCGGCAGCCACGGCCACAGCTCACCGCCGACGCGACG
GGCAATGGTTGCCCAAGAGGTTCGGCGCCTCCTCTTCTTCCTCCTCCTCGCGCTCTTCCTCGCACTCCTCCGGCACTGCT
CGGCGTCAAGGCTGAGCCCGCGGCGGAGACGCCGCTCGGCCGGCGCACTCACAGCGCCGGCATCGTCATCAACGAGGGCG
GCCGGCGCGCCTCCTCGTCGGCTCCTCCGCGCTTCGTCAAGCCCAAGACGGAGCCGGGGCTGGCGCCGGTGAAGACGGAG
CCGGGCCTCCCCGCGGTGAAGACGGAGCACGGCGGCAACGTCGAGCTCGACGACGACGTGGCCCTGGAATGGGCGCGCGC
GGACTCCCTAAAGATGGCGAGGGAGCGCCAGTGCGCCGCCCTGCGGCGATTCGCGCAGCGCCGCCGGGGCCGCGACGAAG
GAGGAGTCGTCGTCATCGAGGACAGCGACGACGACGACGCGCCGCCGCCACCAGTTCGCGTTGGCGACGCCGGTCAGGGG
TCTACCAGGGACGGCCGCGTCAAGGAG-----------------------------------------------------
---------------------------------GAGAAGCCCGACGACGATGACGGCGGCGAGGATGGCGGCGACGACGG
CGACTACTCCGCGTTTAGCCAGTTTCTTTTTAATTAGATATATTATGTAATAAAAATCCGCGACTATTATGTAATATATG
CCGAACTTCGCCGAACTTTGCTATATTTTTGCCTTTTTTTTAAACGCGCCTGGGGCGGTCCTAGGCCGGGCGGCTGGGGA
CCAACTCGTCCCAGGGCCATTTTTTGCGCCGGCTCACCCCCAGGCGGCGATTTTAGGCGCCCCTGGGGGGCCAACGGCTG
GAGATGCGTGCGGACGGTTCTGCAACGATGCC---AACATTGCATCCGTCGATGCTTGATCATGTATGAGCATGCACTGA
GATCCCG------------GTGGCTTACCTTCTTCGTCGTTGCTGCTGCCTCAGCCGTTATCTAGTTCTTGCTTTAGCTA
TGAT----------------------------------------------------------------------------
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--------------GTGTTAGGTTTTGCTTCCAACTACTGTATGTTGTACCCTAGTATCTGAAATGTTGTGTGGGTGCCC
CGGTTCAGCTGGTATGTGCTCTGCTTTTATTTTGGGATCTCGCATGATCC-TTTGAGGTGCTGGGCTGGGGTTCGTCGTG
ATCCCCGGTCATGTAAGATAGTATGTCGTGTGTGGGGTAACGAGAACCCTAGTAGTAGTTGTGAACCTTGGTTTCTCTTA
--------------------------------------------------------------------------------
--ATAAAATGGGAGAGGGAGGCCTCTCGTTTGATCAAGAAAAAGAAATGCACCGAGATCCCACGTTGATCCTTTATGT--
-ATATCTGTACATACTTGTGGAAGATCCGCCATGAGTTCCAAAAATTTACTTCCTTCATACTCAGTAGAGGAGCACTTCT
AAACCTTATCTTCTACTCCCTCCGTTCACTATTATAAGATGTTTTAAATATTTCAATATGGACTACACATGGACTGAAAT
GAGTGAACAAACACACTAATATACGGCTATATACAT-TGTTCCAG-AAAAAAGTTAGAACATCTTATAATGG--------
--------------------------GAGAGGCTCCCGTAATTGCCTTACCTTATTATATGTTTCTACATTGGCCACAAC
GCCACATCATCTTGCGCTGCCCACCTTAGATCACAGGGAGCACAAAAACTATTCTCAACACTAGCACCATGGCACCACCA
GCCATTCCGCCGAACTACTTCTCTCACGGTTCCTGCATCGACTTCGTCGTACAGAATCGCACGGCGTCAGAGACTGCAAG
GAATATATGACTGCTTCCAATGTGCTCGGTGAGCTTCGATGCTTGCAATTTTTCTATGACGACG
>chr5A_221
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---------------------------------------------------------------AAATAAGAG--------
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-----------------------------------------------------------AAAAGAAAAAAGAAGAAGAAC
ACGGAAGCTAATGAGGATGGAGAGTAGGCATCTTCTGGGCGAGGTACCGTCGACGATGACAACCGGTCGAGTGGCCACGT
ATCTGTCCATAACACAAGAG------------------------------------------------------------
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--------------------------------------------------------------------------TAAAGT
AAAATACACCTAAAAACATCCTAGTCGGCCATGGCACAAGAGC-TGCACGTGAAAACTTAATGCACGAGGCAGGTAGGAG
TTAGCGGGCACCGCATAATCGCCTAGGGCACGCAGCGCACATGTAGACGATCTCAACCGTGTACGTGGCTCTCAGCGGAG
CACGGCTCATTCATGCATATCACTTCTCAACAATTACTGCCCATGCGGAGCATCGTCTCCTATAAATTGGGGCCATATAT
ACGAGTCTTGTTCCTGTGCGTTTTCGCAGCAGGGAAGGCAGCCATGGAGAGCAAGCATT---TCAAGAGCGTGATCATGT
GTGCACTCATACTGATACTGGGACTGCTTGTCCAGGGACAAATCCAAGTAGCAGAGGGCAAGAGCTGCTGCAGAGACACC
AGGTCAAGAAACTGTTACAACGTGTGCCTTCTTGTGCACCCAAGTACTCCCTGCTCAAAAATGTGTGGCTGTGTGCTCA-
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-----------------CAAGGGACAGCACATGCCCCAGGGAATACCCTAAGCTCAACCTTCTCCCCGGTTCAGCTGGTA
CGTGAACCCAAGCCACCCTTCCTGTTTTCTCTACATCATTTTGCTCCCAGATGCATAGAAATTGCAATTAACGGCTGGTT
GACTAATGCTTGCTCCTGCTGTTGCG------------------------------------------------------
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----------------------------------------------------------------------------GAAG
AAGAACCAGACGCCATTGAGTACTGCAAATTAGGATGTAGGCTCTCAGTCTGTGACAACGTCAATTCAGGTAGTA-----
TCTGAATTAACTCATCATCTG--TATATATAACTTTCAATTTATCATAAGAGGGAAAAGTTTTTTTTTCGGTTTGGAATG
AGCATTGCACATATCTTGATCTTGTCATCAGCTGAGCTTGGCGAAGACACGAAAGTCGGCGTGGGGCGCTGC--------
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-------------------------------------------------------------------------------G
GCGATGCGTGCGGCCGGTTCTGCAACGATGCCACCAACATTGCATCCGTCGATGCTTGATCATGTATGAGCATGCGCTGA
GGTCCCGATCGTCTTCCCAGTGGCTTACCTTCTTCGTCGTTGCTGCTGCCTCAGCCATTATCTAGTTCTTGCTTTAGCTA
TGATGTGCTAGGCTTTGCTTCCAACTACTGTATGCTGTGTCTGAAGTGTTGTGTGGGTGCTCTGCTTTTATTTTGAGATC
TTGCACGATCCTTTTGAGGTGTTGGGCTGGGGTTCGTCGTAATCCCCGGTCATGTAAGATAGTATGTCGTGTGCGGGGTA
ACAAAAACCCTAGTAGTAGCTGTGAACCTTGGTTTCTCTTAGTGAAATCGGAGAGGGGGGCCTCTCTTTTGATCAAGAAA
ATAAAATGCACTGAGATCCCACGTCAATCTTTTATTTATATCTGTACATACTTGAGGAAGATCCGCCGCGAGTTCCATAA
TTTACTTCGTTCATACTCAGTAGAGGAGCACTTCTAAACCTTATCTTCTACTCCCTCCGTTCACTATTAAGATATTTTTT
ATATTTCAATATGGACTACATATGGACTGAAATGAGTGAACAAATACACTAAAATACGGCTATATACATCTGTTTCAGAA
AAAAGTTAGAACATCCTATAATGGTGAACGGAGGGAGGGAGTAGTATTTAGTAAACCGGAGAGGCTCCGGTGATTGCCTG
AACTTATTATATGTTTCTACATCGGCCACAAAGCCGGCAACGGCCGCGGGCAAGGCCGGCCAGGTCTTGGTCATGCCGGC
TGCGGGCAAGGCCAGCTACGCCTCGGTCTTTCCGGGCGTGTACGCCGGTGTGGGCGTTTTCCTGCATCCATAGGTTCATC
GCCTGGCCGTGGACAAGGCTGCGAGCACAGCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTACTCCCTGCTCAAAAATGTGTGG
CTGTGTGCTCACAAGGGACAGCACATGCCCCAGGGAATACCCTAAGCTCAACCTTCTCCCCGGTTCAGCTGGTACGTGAA
CCCAAGCCACCCTTCCTGTTTTCTCTACATCATTTTGCTCCCAGATGCATAGAAATTGCAATTAACGGCTGGTTGACTAA
TGCTTGCTCCTGCTGTTGCGGAAGAAGAACCAGACGCCATTGAGTACTGCAAATTAGGATGTAGGCTCTCAGTCTGTGAC
AACGTCAATTCAGGTAGTATCTGAATTAACTCATCATCTGTATATATAACTTTCAATTTATCATAAGAGGGAAAAGTTTT
TTTTTCGGTTTGGAATGAGCATTGCACATATCTTGATCTTGTCATCAGCTGAGCTTGGCGAAGACACGAAAGTCGGCGTG
GGGCGCTGCGGCGATGCGTGCGGCCGGTTCTGCAACGATGCCACCAACATTGCATCCGTCGATGCTTGATCATGTATGAG
CATGCGCTGAGGTCCCGATCGTCTTCCCAGTGGCTTACCTTCTTCGTCGTTGCTGCTGCCTCAGCCGTTATCTAGTTCTT
GCTTTAGCTATGATGTGCTAGGCTTTGCTTCCAACTACTGTATGCTGTG--------TCTGAAGTGTTGTGTGGGTGC--
-------------------TCTGCTTTCATTTTCAGATCTTGCACGATCCTTTTGAGGTGCTGGGCTGGGGTTCGTCGTA
ATCCCCGGTCATGTAAGATAGTATGTCGTGTGCGGGGTAACAAAAACCCTAGTAGTAGCTGTGAACCTTGGTTTCTCTTA
G-------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr5A_221
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---------------------------------------------------------------AAATAAGAG--------
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-----------------------------------------------------------AAAAGAAAAAAGAAGAAGAAC
ACGGAAGCTAATGAGGATGGAGAGTAGGCATCTTCTGGGCGAGGTACCGTCGACGAGGACAACCGGTCGAGTGGCCACGT
ATCTGTCCATAACACAAGAG------------------------------------------------------------
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--------------------------------------------------------------------------TAAAGT
AAAATACACCTAAAAACATCCTAGTCGGCCATGGCACAAGAGC-TGCACGTGAAAACTTAATGCACGAGGCAGGTAGGAG
TTAGCGGGCACCGCATAATCGCCTAGGGCACGCAGCGCACACGTAGACGATCTCAACCGTGTACGTGGCTCTCAGCGGAG
CACGGCTCATTCATGCATATCACTTCTCAACAATTACTGCCCATGCGGAGCATCGTCTCCTATAAATTGGGGCCATATAT
ACGAGTCTTGTTCCTGTGCGTTTTCGCAGCAGGGAAGGCAGCCATGGAGAGCAAGCATT---TCAAGAGCGTGATCATGT
GTGCACTCATACTGATACTGGGACTGCTTGTCCAGGGACAAATCCAAGTAGCAGAGGGCAAGAGCTGCTGCAGAGACACC
AGGTCAAGAAACTGTTACAACGTGTGCCTTCTTGTGCACCCCAGTACTCCCTGCTCAAAAATGTGTGGCTGTGTGCTCA-
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-----------------CAAGGGACAGCACATGCCCCAGGGAATACCCTAAGCTCAACCTTCTCCCCGGTTCAGCTGGTA
CGTGAACCCAAGCCACCCTTCCTGTTTTCTCTACATCATTTTGCTCCCAGATGCATAGAAATTGCAATTAACGGCTGGTT
GACTAATGCTTGCTCCTGCTGTTGCG------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------GAAG
AAGAACCAGACGCCATTGAGTACTGCAAATTAGGATGTAGGCTCTCAGTCTGTGACAACGTCAATTCAGGTAGTA-----
TCTGAATTAACTCATCATCTG--TATATATAACTTTCAATTTATCATAAGAGGGAAAAGTTTTTTTTTCGGTTTGGAATG
AGCATTGCACATATCTTGATCTTGTCATCAGCTGAGCTTGGCGAAGACACGAAAGTCGGCGTGGGGCGCTGC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GCGATGCGTGCGGCCGGTTCTGCAACGATGCCACCAACATTGCATCCGTCGATGCTTGATCATGTATGAGCATGCGCTGA
GGTCCCGATCGTCTTCCCAGTGGCTTACCTTCTTCGTCGTTGCTGCTGTCTCAGCCGTTATCTAGTTCTTGCTTTAGCTA
TGAT----------------------------------------------------------------------------
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--------------GTGCTAGGCTTTGCTTCCAACTACTGTATGCTGTG--------TCTGAAGTGTTGTGTGGGTGC--
-------------------TCTGCTTTTATTTTCAGATCTTGCACGATCCTTTTGAGGTGCTGGGCTGGGGTTCGTCGTA
ATCCCCGGTCATGTAAGATAGTATGTCGTGTGCGGGGTAACAAAAACCCTAGTAGTAGCTGTGAACCTTGGTTTCTCTTA
G-------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr5A_221
--------------------------------------------------------------------------------
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---------------------------------------------------------------AAATAAGAG--------
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-----------------------------------------------------------AAAAGAAAAAAGAAGAAGAAC
ACGGAAGCTAATGAGGATGGAGAGTAGGCATCTTCTGGGCGAGGTACCGTCGACGAGGACAACCGGTCGAGTGGCCACGT
ATCTGTCCATAACACAAGAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TAAAGT
AAAATACACCTAAAAACATCCTAGTCGGCCATGGCACAAGAGC-TGCACGTGAAAACTTAATGCACGAGGCAGGTAGGAG
TTAGCGGGCACCGCATAATCGCCTAGGGCACGCAGCGCACACGTAGACGATCTCAACCGTGTACGTGGCTCTCAGCGGAG
CACGGCTCATTCATGCATATCACTTCTCAACAATTACTGCCCATGCGAAGCATCGTCTCCTATAAATTGGGGCCATATAT
ACGAGTCTTGTTCCTGTGCGTTTTCGCAGCAGGGAAGGCAGCCATGGAGAGCAAGCATT---TCAAGAGCGTGATCATGT
GTGCACTCATACTGATACTGGGACTGCTTGTCCAGGGACAAATCCAAGTAGCAGAGGGCAAGAGCTGCTGCAGAGACACC
AGGTCAAGAAACTGTTACAACGTGTGCCTTCTTGTGCACCCCAGTACTCCCTGCTCAAAAATGTGTGGCTGTGTGCTCA-
--------------------------------------------------------------------------------
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-----------------CAAGGGACAGCACATGCCCCAGGGAATACCCTAAGCTCAACCTTCTCCCCGGTTCAGCTGGTA
CGTGAACCCAAGCCACCCTTCCTGTTTTCTCTACATCATTTTGCTCCCAGATGCATAGAAATTGCAATTAACGGCTGGTT
GACTAATGCTTGCTCCTGCTGTTGCG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GAAG
AAGAACCAGACGCCATTGAGTACTGCAAATTAGGATGTAGGCTCTCAGTCTGTGACAACGTCAATTCAGGTAGTA-----
TCTGAATTAACTCATCATCTG--TATATATAACTTTCAATTTATCATAAGAGGGAAAAGTTTTTTTTTCGGTTTGGAATG
AGCATTGCACATATCTTGATCTTGTCATCAGCTGAGCTTGGCGAAGACACGAAAGTCGGCGTGGGGCGCTGC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GCGATGCGTGCGGCCGGTTCTGCAACAATGCCACCAACATTGCATCCGTCGATGCTTGATCATGTATGAGCATGCGCTGA
GGTCCCGATCGTCTTCCCAGTGGCTTACCTTCTTCGTCGTTGCTGCTGCCTCAGCCGTTATCTAGTTCTTGCTTTAGCTA
TGAT----------------------------------------------------------------------------
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--------------GTGCTAGGCTTTGCTTCCAACTACTGTATGCTGTG--------TCTGAAGTGTTGTGTGGGTGC--
-------------------TCTGCTTTTATTTTGAGATCTTGCACGATCCTTTTGAGGTGCTGGGCTGGGGTTCGTCGTA
ATCCCCGGTCATGTAAGATAGTATGTCGTGTGCGGGGTAACAAAAACCCTAGTAGTAGCTGTGAACCTTGGTTTCTCTTA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr5A_221
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AAATAAGAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------AAAAGAAAAAAGAAGAAGAAC
ACGGAAGCTAATGAGGATGGAGAGTAGGCATCTTCTGGGCGAGGTACCGTCGACGAGGACAACCGGTCGAGTGGCCACGT
ATCTGTCCATAACACAAGAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TAAAGT
AAAATACACCTAAAAACATCCTAGTCGGCCATGGCACAAGAGC-TGCACGTGAAAACTTAATGCACGAGGCAGGTAGGAG
TTAGCGGGCACCGCATAATCGCCTAGGGCACGCAGCGCACACGTAGACGATCTCAACCGTGTACGTGGCTCTCAGCGGAG
CACGGCTCATTCATGCATATCACTTCTCAACAATTACTGCCCATGCGGAGCATCGTCTCCTATAAATTGGGGCCATATAT
ACGAGTCTTGTTCCTGTGCGTTTTCGCAGCAGGGAAGGCAGCCATGGAGAGCAAGCATT---TCAAGAGCGTGATCATGT
GTGCACTCATACTGATACTGGGACTGCTTGTCCAGGGACAAATCCAAGTAGCAGAGGGCAAGAGCTGCTGCAGAGACACC
AGGTCAAGAAACTGTTACAACGTGTGCCTTCTTGTGCACCCCAGTACTCCCTGCTCAAAAATGTGTGGCTGTGTGCTCA-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------CAAGGGACAGCACATGCCCCAGGGAATACCCTAAGCTCAACCTTCTCCCCGGTTCAGCTGGTA
CGTGAACCCAAGCCACCCTTCCTGTTTTCTCTACATCATTTTGCTCCCAGATGCATAGAAATTGCAATTAACGGCTGGTT
GACTAATGCTTGCTCCTGCTGTTGCG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GAAG
AAGAACCAGACGCCATTGAGTACTGCAAATTAGGATGTAGGCTCTCAGTCTGTGACAACGTCAATTCAGGTAGTA-----
TCTGAATTAACTCATCATCTG--TATATATAACTTTCAATTTATCATAAGAGGGAAAAGTTTTTTTTTCGGTTTGGAATG
AGCATTGCACACATCTTGATCTTGTCATCAGCTGAGCTTGGCGAAGACACGAAAGTCGGCGTGGGGCGCTGC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GCGATGCGTGCGGCCGGTTCTGCAACGATGCCACCAACATTGCATCCGTCGATGCTTGAG-ATGTATGAGCATGCGCTGA
GGTCCCGATCGTCTTCCCAGTGGCTTACCTTCTTCGTCGTTGCTGCTGCCTCAGCCGTTATCTAGTTCTTGCTTTAGCTA
TGAT----------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------GTGCTAGGCTTTGCTTCCAACTACTGTATGCTGTG--------TCTGAAGTGTTGTGTGGGTGC--
-------------------TCTGCTTTTATTTTCAGATCTTGCACGATCCTTTTGAGGTGCTGGGCTGGGGTTCGTCGTA
ATCCCCGGTCATGTAAGATAGTATGTCGTGTGCGGGGTAACAAAAACCCTAGTAGTAGCTGTGAACCTTGGTTTCTCTTA
G-------------------------------------------------------------------------------
---TGAAATCGGAGAGGGGGGCCTCTCTTTTGATCAAGAAAATAAAATGCACCGAGATCCCACGTCAATCTTTTATTT--
-ATATCTGTACATACTTGAGGAAGATCCGCCGCGAGTTCCAT-AATTTACTTCGTTCATACTCAGTAGAGGAGCACTTCT
AAACCTTATCTTCTACTCCCTCCGTTCACTATTA--AGATATTTTTTATATTTCAATATGGACTACATATGGACTGAAAT
GAGTGAACAAATACACTAAAATACGGCTATATACATCTGTTTCAG-AAAAAAGTTAGAACATCCTATAATGGTGAACGGA
GGGAGGGAGTAGTATTTAGTAAACCGGAGAGGCTCCGGTGATTGCCTGAACTTATTATATGTTTCTACATCGGCCACAAA
GCCACATCATCTTGCGCTGCCCAGCTTAGATCACAGGGAGCACCAAAACTATTATCAACACTAGCACCATGGCAGCACCA
GCCATTCCTCCGAAATACTTCGCTCACGGTTCCTGCATCGACTTCGTCGTACAGAATCGCACAGCGTCAGAGACTGCGAG
GAATATATGACTGCTTCCAATGTGCTCGGTGAGCTTGGATGCTTGCAGTTTTTCTATGACGACG
>SNPs
SSSS------------SS--------------------------------S--S---S--------S----------S--
-S-------S------------S--------------------------------S------------------------
------S--------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------S--------S---S------
-----------------------------------------------S------------------------S-------
---S-----S---S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
------S------S------------------------------------S--------------------S-----S--
-----------------------------------------------S--------------------------------
----------------------------------------------------------------------------SS-S
SSS---------------------------------------------S-----S----SSS------------------
------------------------------------S-------------------------------------------
--S------------------------S--S---S-S---------S-S-------------------------------
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-------------------------S----------------------------------------SS-S----------
----------------S---S-----------SS--S-------------------S---S-------------------
--------------S-----------------------------------------------------------------
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------------------------------------------------------------------------------S-
----------S---S--------------S---------------------------------------------SSSSS
---S------S----------S-------------------------------S---SS---------------------
-S------S----------------------------------------S------------------------------
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----------------------------------------------S---------------------------------
----S---------------------------------------------------------------------------
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---------------------S-----S-S-----------------S--------------------------------
-------------S------------S------------------------------------------------S----
------S-------------------------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-------S------------------------------------------S-------------------------SS
S--------------------------S-------------S----------------S---------------------
----S-----------------------S----------------SS-----------------S------S--------
-------S----S--------S-----------------S-----S-----S----------------S--------S-S
------------------------------S-------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------SS-----------------------------S------------------------
>forward_1260
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----------------------------------------GCAGCTCACACCAGGTCTAG--------------------
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>reverse_5625
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------------------------CCGAGTGGATTGAAGGGGTT------------------------------------
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----------------------------------------------------------------
