>input_sequence_72834
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---------------------------------------------TCCCCACGCCTGCCACCACCACCAG---CA---CA
CCGTCGTCCTCACACTTGCCTCTCATCCTCCCTGCCGAGG-----CCGCAGCGGTCAGCAGGCGGCGCGGACGCTTCTCC
TGGGCAAGGACAGGCA-----AGCGACAGGCATGGGCTTCCCGGTCGGCTACTCCGAGCTTCTGCTCCCCAAGCAGCTGC
TCCACCTCCTCCTCCTGCTCGGTTACCTCCGCCGCTTCCTCCTCTGGGCCTTCGACGCCGTCGGCCTCGGCGACCTGCTG
GATCTCGGGGACGAGCACCTGCCGCAGGACCACGCGCGCGCCGACCACGCCGCCGCGGCG------GCGCAGCTGCTGCA
GCACCGGCGGCCCGAGTTCCGGCCCGTCACGGCCATGGTCATCGAGGAGGTGCTCCCCGTGGTGCGGTTCGACGAGCTGG
AGGCCGCGGCGTGCGTCGACGGGGACTGCGCCGTGTGCCTCAGCGGCATCGGCGGCGGCGACGAGGTG------------
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------------------CGGCGAGCTGCCTGGCCCCAGCCGTGTACATAGGGCGAAATGAGTAAAGTAACCGCCCCGAA
AAGGGCTAGGAGATTAGATTCTTGTTATGTATAGCTAGATTCCATCTTCCAAGTTTGCGGAGCTGTGGATCTTCCTTT-C
TTCTGCCAATTAAATTTGT---TGATGAGT--------------------------------------------------
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>chr2A_1_TraesCS2A01G395500
AAGATTCTTCCAGAATCGAAGCCCTCCCCAGCTTCTTCTAGAATCTTCGAGCCTCATTTGTTTTACAATCCTATCTAGTT
AGAGTCTAATTAGTTAGTATTGTAAAAAGAATGGGGCTCAAAGATTCTGGGAGAAGCTGAGAAAGCGTTAAATTCTGGGG
CCATCTTGCCCACCAAATTAGCCAATTAGGTCAATCCAAAGATTCATGTTGTCCACACGGTGAGCGCTTAGTATG-TTTA
GCATGCGGTTAATATTATATTTAAAAAAATCAATGCCAACGAATTTTTTTTGAGAATCTATCAATGCCAGCACTAAGTAT
AGATTTATAGCGCATAAATAACATCCCACCTAATATCTGTGTGCAACTAATATACTGCCTAATATTTTTTA--AATGCCA
GCGATTTTTTGAGAAT--------GCCAGTTAATATCATTCAAAATATCAATGCCTGTGATTTTTGAGAATC--------
----------TATCCAAAATATCTGTGTGCAACTGGTATACATTGCCTAATTTTTTAACTGCCTAATATTAACATCATGC
A-----------------------------------TTCTACTATGCACTCTATGCATCTAGGCGGAAAGAGCACTTAAG
GATCAACGTGTGCATCTAGGGTACGGGTACATGCACCGGGGTTG------GGACGAACGGTGCACGCACCCGTACGCGCG
CCCGTTTCCGTTGCCAACGTGCAGTGCACCGACCGTTGAGGGCACACCAGTTGGGGGATCAGGAGGCGGGCGGACCACCC
GCGCGTCAGACGGGCCACGCGCG------------GTGACACCCGGCCCGGCGGCGGGCGGGCGGGCGGGCGGGCCAGTC
AGTCACACCGACTCGCGGGGCTGGCCGGGACTGGGAGTCGGTCATCGGGTCCGGGTCGCGCGCACGACACACCGGCGACG
CCGCGCCACCCAACCCCAACCGGACGCACGCTAGC---CGCTAGCGCTGCCACCCCCACCCAGCCGGATCCTTCCCCGCC
CCGCTCCTTCGCTTTTATATAAGCCGGCCTCGCCCCGTCTCGGCCTCCCCACGCCTGCCACCACCACCAG---CA---CA
CCGTCGTCCTCACACTTGCCTCTCATCCTCCCTGCCGAGG-----CCGCAGCGGTCAGCAGGCGGCGCGGACGCTTCTCC
TGGGCAAGGACAGGCA-----AGCGACAGGCATGGGCTTCCCGGTCGGCTACTCCGAGCTTCTGCTCCCCAAGCAGCTGC
TCCACCTCCTCCTCCTGCTCGGTTACCTCCGCCGCTTCCTCCTCTGGGCCTTCGACGCCGTCGGCCTCGGCGACCTGCTG
GATCTCGGGGACGAGCACCTGCCGCAGGACCACGCGCGCGCCGACCACGCCGCCGCGGCG------GCGCAGCTGCTGCA
GCACCGGCGGCCCGAGTTCCGGCCCGTCACGGCCATGGTCATCGAGGAGGTGCTCCCCGTGGTGCGGTTCGACGAGCTGG
AGGCCGCGGCGTGCGTCGACGGGGACTGCGCCGTGTGCCTCAGCGGCATCGGCGGCGGCGACGAGGTG------------
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------------------CGGCGAGCTGCCTGGCCCCAGCCGTGTACATAGGGCGAAATGAGTAAAGTAACCGCCCCGAA
AAGGGCTAGGAGATTAGATTCTTGTTATGTATAGCTAGATTCCATCTTCCAAGTTTGCGGAGCTGTGGATCTTCCTTT-C
TTCTGCCAATTAAATTTGTTGATGAGTTAGGCGTTCCGGGTGCAAAATTTGGGT-CCCTTTGCTCCTTCTCTTTCCCCGC
GTTGGTCAGGCCGTTCGGCCGCTCGGCTTTTCGTTGCATATACTAGTAGTGCAAATTTAGAAAGGCTTCA-TCAAATCCC
CCCGCTGAGCGTACAAATTTAGGAAGGATTCTACATCAGCTGAGGATTTTTCCTTTCTGAAACCATATGCATCCTGGCAA
GTGGCAGGAAATTTAGGCCCCGACAGTACAGCCGCAGCCTTCCCTTGATTGGATCTACTAGT--AGTACCGTTGTTATTG
CTACTCCTACAACTGCTGACACTGAAACCCATGCAGTAGGGCAGTGGAAGAATGTTCTGGAATGGTAGTAAATTAGGTAA
AAATGAACATATTTGGCCCTTC--TTCGAAACTTACAATACAAAATACTACTCCATCCGATTTCTAAATATAAGACA---
-----------------------------------------------------------------------TTCTATAGA
TTTCAATACAAACTACATACAAATATATATATAGACATGCTTTAGAGGATAGATTCACCCACTTTGCTCCGTAT------
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---------------------------------------GTAGTTTCTTATTGAAATCTCTAAAAGAACTTATATTTAGA
TATGAAGGGAGTATTTTGGATCTGATTTTTTTCGACAGACGTAGCCTTTGCACGACGCCCTGACTAGGGCGCCCTGCTAG
ATTAGCATGACGCCCTGGGCTAGGCCGTCGTGTTATATCTAGGTCGAGCCTCAGTCCCAGACGTCATGAAAAATGATTTT
TGTGAAATATTTTAATATTGAATTCATTTTGTGTTGAAGTTTTTAAAAAGGATAAAATCTGTCCACTTTCACACAAATTG
GTAGCATTGCTAGTATAATTTCTCGTAAACAGGTTAACTGA---AAAAATCAGATGGCCGAGAGGCAAAAATTCCAGAAA
AATTTGGTGTTTTGACCTTTTTATGAAAGTTGAGCGAGATGTGACCTTGGTTC-AATTTTTTTAAAGATCTGACCTTTTT
CCTATTGTTAGGGTCGATGACGGTATGGTATAACTG
>chr2B_184
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-----------------------AATAAGGTCAATTCAACGACTCGGGTTGCCCACATGATGATCGCTCAATATATTTTT
GCATGCAGTCAATGTCA---TTCAAAATATCAATGCCAACGA---TTTTTTGAGAATCTATCAATGCCCGCGCTAATTAT
ATAAT--TAGCGCATAAATAATAACCCACCTAATATCCGTGTGCAACTAATGTACTCCCTAATATTTTTTTAGAATGCCA
GCGATTTTTGTAGAATCTATCAATGCCATTTAATATAATTCAAAATATCAATGTCGGCGATTTTTTGAGAATCTATCAAT
GCGTAAATAATATCCAAAATATCCGTGTGCAACTAATATAC----------------ACTGCCTAATCTTAACACCATGC
ATTATTACTACTAGTAATTTTGAAATAATATCTGTTTTCTACTATGCACCCTATGCATCTAGTCGGAAAGAGCAG-TAAG
GATCAACGTGTGCATCTACGGTACGGATACATGCACCGGGGTTG------GGATGAACGGTGCACGCACCCGTACGCGCG
CCCGTTTCCGTTGCCAACGTGCAGTGCACCGACCGTTGAGGGCACACCAGTTGGGGGATCAGGAGGCGGGCGGACCACCC
GCGCGTCAGACGGGCCACGCGCGCGGGGGGTCGCGGTGACACCCGGCCCGGCGGCGGGCGGGCAGGCGGGCGGGCCAGTC
AGTCACACCGACTCGCGGGGCTGGCTTGGACTGGGAGTCGGTCATCGGGTCAGGGTCGCGCGCACGACACACCGGTGACA
CCGCGCCACCCAACCCCAACCGGACGCACGCTACGGTACGCTAGCGCTGCCACCCCCACCCAGGCGGATCCTTCCCCGCC
CCGCTCCTTCGCTTTTATATAAGCCACCCTCGCCTCGTCTCGGCCTCCCCACGCCTGCCACCACCACCACCACCA---CA
CCATCGTCCTCACACTTGCCTCTCATCCTCCCTGCCCTGCCGAGACTGCAGCAGTCAGCCGGCGGCGCGGACGTCTCTCC
TTGGC----------A-----AGCGACAGGCATGGGCTTCCCGGTCGGCTACTCCGAGCTGCTGCTCCCCAAGCAGCTGC
TCCACCTCCTCCTCCTGCTCGGCTACCTCCGCCGCTTCCTCCTCTGGGCCTTCGACGCCGTCGGCCTCGGCGACCTGCTG
GATCTCGGGGACGAGCACCTGGCGCAGGAGCACGCGCGCGGCGACCACGGCGCCGCGGAG------GC---GCTGCTGCA
GCACCGCCGGCCCGAGTTCCGGCCCGTGACGGCCATGGTCATCGAGGAGGTGCTCCCCGTGGTGCGGTTCGACGAGCTGG
AGGCCGCGGCGTGCGTCGACGGGGACTGCGCCGTGTGCCTCAGCGGCATCGGCGGTGGCGACGAGGTGCGGCGGCTCAGC
AACTGCCGCCACGCCTTCCACAGGGGGTGCCTGGACCGCTGGATGGAGCACGACCAGCGCACCTGCCCGCTCTGCCGCGC
CCCGCTCATCCCCGACGAGATGGCCGGCGCGCTCTGGGCCACCGCCGCCGGCGTGCCCGACGCCTCCGACTTCGACTTCT
TCTACCTGGGCGCCTCGGCGCCCACCACCCCGACGCTGCTGCGGCCGCACGAGCTGCTGCTCACCGGCCTCGGCGGCTAC
CAGTGAGCC-----CCCGATTCGGTCCAGGCAACTGG--CCGCCGCCGTCCAGAATGCGCAATTTTACAGGACTGAATTG
GTCTCCGCGTCCGGACGCCGGCGAGCTGCCTGGCCCAGGCCGTGTACATAGGGCGAAATGAGTAAAGTAACCGCCCCGAA
AAGGGCTAGGAGATTAGATTCTTGTTATGTATAGCTAGATTCCATCTTCCAAGTTTGCGGAGCTGTGGATCTT----T-C
TGCTGGCAATTAAATTTGT---TGAGTTAGGCGTTCCGCGTGCAAAATTTCTGT-CCCTTTGCTCCTTCTCTTTCCC-GT
GTTGGTCAGGCCGTTCAGCCGCTTGGCTTTTCGGTACATATACTAGTAGTACAGATTTAGAAAGGCTTCA-TCAACTTCC
CCCGCTGAGCGTACAAATTTAGGAAGGATTTTACATCAGCCGAGGA-------TTTCTGAAACCATATGCATCCTGGCAA
GTGGCAGGAAATTTAGGCTCCGACAGTACAGCCGCAGCCTTCCCTTGATTGGATCTACTAGT--AGTACCGTTGTTATTG
------CTACAACTGCTGACACTGAAACCCATGCAGTAGGGCAGTGGAAGAATGTTCTGGAATGGTAGTAAATTAG----
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>chr2D_533
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------------------------------------TTCTACTATGCACCCTATGCATCTAGTCGGAAATAGCACTG-AG
GATCAACGTGTGCATCTACGGTACGGGTACATGCACCGGGGTTGGGAATCGGATGAACGGTGCACGCACCCGTACGCGCG
CCCGTTTCCGTTGCCAACGTGCAGTGCACCGACCGTTGAGGGCACACCAGTTGGGGGATCAGGAGGCGAGCGGACCACCC
GCACGTCAGACGGGCCACGCGCGCGGGGGGTCGCGGTGACACCCGGCCCGGC------------GGCGGGCGGGCCAGTC
AGTCACACCGACTCGCGGGGCTGGCTGGGATTGGGAGTCGGTCATCGGGTCAGAGTCGCGCGCACGACACACCGGTGACA
CCACGCCACCCAACCCCAACCCCAACCGGA--------------CGCTGCCACCCCCACCCAGCCGGATCCTTCCCCGCG
CCGCTCCTTCGCTTTTATATAAGCCGGCCTCGCCTCGTCTCGGCCTCCCCACGCCTGCCACCACCACCACCACCAGCGCA
CCATCGTCCTCACACTTGCCTCTCATCCTCCCTGCCGTGCCGAGACCGCAGCGGTCAGCAGGCGGCGCGGACGCTTCTCC
TTGGC----------AAGGCGAGCGACAGGCATGGGCTTCCCGGTCGGCTACTCCGAGCTGCTGCTCCCCAAGCAGCTGC
TCCACCTCCTCCTCCTGCTCGGCTACCTCCGCCGCTTCCTCCTCTGGGCCTTCGACGCCGTCGGCCTCGGCGACCTGCTG
GATCTCGGGGACGAGCACCTGGCGCAGGAGCACGCGCGCGCCGACCACGCCGCCGCGGCGCACCACGCGCTGCTGCTGCA
GCACCGCCGGCCCGAGTTCCGGCCCGTGACGGCCATGGTCATCGAGGAGGTGCTCCCCGTGGTGCGGTTCGACGAGCTGG
AGGCCGCGGCGTGCGTCGACGGGGACTGCGCCGTGTGCCTCAGCGGCATCGGCGGCGGCGACGAGGTGCGGCGGCTCAGC
AACTGCCGCCACGCCTTCCACCGGGGGTGCCTGGACCGCTGGATGGAGCACGACCAGCGCACCTGCCCGCTCTGCCGCGC
CCTGCTCATCCCCGACGAGATGGCCGGCGCTCTCTGGGCCACCGCCGCCGGCGTGCCCGACGCCTCCGACTTCGACTTCT
TCTACCTGGGCGCCTCGGCGCCAGCCACCCCGACGCTGCTGCGGCCGCACGAGCTGCTGCTCACCGGCCTCGGCGGCTAC
CAGTGAGCCGAGCCCCCGATTCGGTCCAGGCAAAATTGTCCGCCGCCGTCCAGAATGCGCAATTTTACAGGACTGAATTG
GTCTCCGCGTCCGGACGCCGGCGGGCTGCCTGGCCCCAGCCGTGTACATAGGGCGAAATGAGTAAAGTAACCGCCCCGAA
AAGGGCTAGGAGATTAGATTCTTGTTATGTATAGCTAGATTCCATCTTCCAAGTTTGCGGAGCTGTGGATCTT----TTC
TTCTGCCAATTAAATTTGTTGATGAGTTAGGCGTTCCGGGTGCAAAATTTCGGTCCCCTTTGCTCCTTCTCTTTCCCCGT
GTTGCTCAGGC------------------------ACATATACTAGTAGTACAAATTTAGAAAGGCTTCAATCAACTTCC
CCCGCAGAGCGTACAAATTTAGGAAGGATTTTACATCGGCCGAGGA-------TTTCTGAAACCATATGCATCCTGGCAA
GTGGCAGGAAATTTAGGCTCCGACAGTACAGCCGCAGCCTTCCCTTGATTGGATCTACTAGTGTAGTACCGTTGTTATTG
------CTACAACTGCTGACACTGAAACCCATGCAGTAGGGCAGTGGAAGAATGTTCTGGAATGCTAGTAAATTAGGTGA
AAATGAACAGATTTGAACCTTCTTTTAGAAACTTACGATACAAAATACTACAGTGCTTCCGTTTACTCCCTCCGTCCCAT
AATGTAAGACGTCTTTTGACACAACACTAGTGTCAGAAAACGTCTTACATTATGGGACAGAGGGAGTATATTTTTAGAAA
TTTCAATACAAACTACATACGGATGTATATAA--ACATACTTTAGAGGATATATTCATTCATTTTGCTCCGTATGTACTC
CCTCCGTTTCAAAATTCTTGTCTTAGATTTGTCTAGATACAGATGTATCTAATACTAAAACGTGACTTGATACATCCGTA
TTTAGACAAATTTAAGACAAGAATTTTGGGACAGAGGGAGTAGTTTCTTATTGGAATCACTAAAAAGACTTATATTTAGG
AACGAAGGGAGTAATTTGGATAAGTTTTTTTCCACATACGTACCCTTTTGCGCGATGCCCTGAATAGGGCGCCATGCTAG
ATTAGCATGACGCCCCGGGCGAGGCCATCGTGCTTTATCTAGATCGGCGCCTCGGTCCAGACGCTATGAAAAATGATTTT
TGTGAAATATTTTAATATTGAATTCATTTTGTGCTGAAGTTTCTGAAAAGGGTTAAATCTGTCTACTTTTACGTTAATTG
GTAGCACGGTGAGTATAATTTCTCGTAAACAGATTGACTGCTCGAAAAATTAGATGGCCGAGAGGCGAAAATTTCGGACA
AATTTAGTGTTTTGACCCTTTTGTGAAAGTTTAGCCAAATCTGACCCTGGTTCGAATTTTTTTTGAGATCCGACTCTTTT
CCAATCGTCGGGGTCGA-------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS---S--------S---S--S--SS----S-----S-S---S----S-S---S----S
------S--S---S-S-SSS--S----S--------------SSS-----------------------S--S----S---
-S-S-SS--------------S-S-------------S-------------S----S-------------S---------
---------SS-----------------S-------S----------------S-S-S-------SSSS-SS--------
-----------------------S----------SS-----SSSSSSSSSSSSSSSS----------S------S-----
-------------------------------------------------S------------S-----------------
------------------S----------------------------------S--------------------------
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---------------------------------------------------------------S----------------
-------------------------S-------------------------S-----------------------S---S
---------------------------------SS---------------------------------------------
----------------------------------S----------------------------------S----------
--S----------------------------------S-S----------------------------------------
-S---SSSSSSSSSS---------------------------------------------S-------------------
----------------------S---------------------------------------------------------
---------------------S-------S----------------------------------------S---------
------S--------------------S----------------------------------------------------
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-------------------------------------------------------------------------SSSS---
--------------------------------------------------S----------------------------S
----------------S------S---------S-S--------------S------------------------S-S--
------------------------------S---------S-----SSSSSSS---------------------------
------------------S-------------------------------------------------------------
SSSSSS------------------------------------------------------------------------S-
---------S-----SS---------S---------S--------------SSSSSSSSSS--SSSSSSS-SS-S-S---
-------------------------------------------------------------------------S--S-S-
--------------------SS--S------SSS----S------------S-----SS--S------------------
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-----------------------------------------------------S----S------SS------------S
S-S----------S-------SS-S------S-SSSSSSSSSSS-S-----S---S-------S---------S------
---------------S----S-----S-----S-S-------S---SSS-SSS-SS-------SS---------------
---------------------------------S--------S-S------S-S---------S-----S--SSS-----
------SS-SS---------------------S--S----S---------S---------------S------S-S--S-
-----S-----------S----S--------S---S-S--S-----S----------------SS-----S---SS----
--S--S--SS-------SSSSSSSSSSSSSSSSSSS
>forward_163
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---------------------------------------------------------------AGCGTTAAATTCTGGGG
CCA-----------------------------------------------------------------------------
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>reverse_2131
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--------------------------------------------------GGGTCCCTTTGCTCCTTCTC----------
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