>input_sequence_72788
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------------------------------------------------------CTATAAAACTCAGTTGCCACCAGCCG
CCACTGAGAGCTCACACCTCCTCGTCTCACCATCTTTTCCGATAAGAGCATGGAGGCTCAGGCTCCCCCTGAAGCCGCAG
GATCTCCTCTAGACCTATCTCTCACTATGGCCCCCGGGGCTCCTTGGTCTGTTCTTCCTTCTGGTCGCGGTGGTCGCCAT
CGCAGCGGCACGGGATCAAGGCTCTACTCTTGCCTCTTCTGTGAGAGGAAGTTCCTCAAGTCGCATGCGCTAGGGGGCCA
CCAGAACGCGCACAGGATGGAGAGGGTCGTCGGCAGCTGGAAGGCCCACCTCTACCTCCCTGACCATCATCATGCCGCGG
CAGCAGCCACCGGTATAGCGCGTC---------T---TGACACCGACGATGACAAGCACCAGAAGCTTGATCTTAATCTC
AAGCTTTAATTTGCTCTAGCTCCTGTGTACACTAAGCAGTACGCACAGGGCAGGCT-TAGCTCCATTGGCCATTGCTATA
TACGGTCACTAGCATATGTGCGC---------------------------------------------------------
------------------------------------------------------------------------------CT
TGTC-----------------CCTT-------------------------------------------------------
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---------------------------------------------------------------------CATGTATGAAA
TCACAAGGCTTTTCTCATTCTTCTGCATGGCGCC------ATGCCAGCGATCGACCAGGATGAGAAT-------------
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------------------------TATGAC---TAATTCCCAGGCTGTTGCATTTTTCCTATGCA---------------
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----------------------------------CCCACCTGCATGTAA-------------------------------
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>chr3D_1_TraesCS3D01G007800
GGCGCGCCCTGCCGTTCCTCCCTACGTGTTCCTCCGTGGCTGGCCATGGCTCACGGGAGCAGGGCGCCCGTGTGTTGGAC
CTTCGACGTTAGCGCTACTCGCAATAACTAATGCGGATAGCTCCTCGATTTAGCAAGTGGCATATTTCCTTTCCT-GCCG
CGCTCCTCCCTAT-AACA--TCCATCATCAGAGCTCAGACTTGAGCTTGCCATGTGTAGGCTAGAGGGTGAAATCCATAT
GTACGAGAAGCAAAGCTGGTAGGTATGCAAATATCCCCATGTCGGTATGTAAAGATACCCGCTCGTATGGACTCGGTGCG
GCAAATCCCATCAGGCA----TCGCCTATATGAGTGTCTAAAGAATATCGAAACAAATTGAGTCGCGCTTGTGAGATCGG
GGC-GAGCACCGAATCAATGGTTCATGTCGCGTCGCGCGCTGAAACAAGAGCGGGCACGTTCGCTCTTCATACTTTCCAT
TTTTT-GTCTCCATTGATACTTAACCATGAACGGACCCATTAGTGTGGGGT-----------------------------
--------------------------------------------------------------------------------
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----------------------TTAGACGCCTGGAGTACTCCCTCCGTTTCAGTTTACAAGTCCTGCGCGTATACCTAGG
TTGCCAATTTTATCACACTAATATAAACTATATAACACAAAAATTATACCGTTTGAAAATAGAACATCTGAAGTTTATAT
TGGTATATTTTTTGTAATATGTGACTTGTATTAGGTTGGTCAAATTGACGACCTAGGGGTACGCGCACACCCTGTAAACT
GAGAGAGGGAGTAGTAACCTTTGATCCAGCCTTAAATATTTGGTCTAGTGGGAATATAGTTTAGGTGGCCCGCTGGTTTG
CTTTCCTAG-AAAAAAACTTAATGACCTTTTTTTTAGAAACAGAGGTACTCAATGACCTGATGCTGATGGTGTGTAC---
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------------ATTACATTACATCTTGTAGCCATGATGTAACCAATGGATGTCCT---------------------AGT
TGGTAGCTGCCCGCAGACTGGAAG--------------------------------------------------------
---GGGCACCCAGATTTAGCAAGTGG-----------------TCACCAGCCCCCTATAAAACTCAGTTGCCACCAGCCG
CCACTGAGAGCTCACACCTCCTCGTCTCACCATCTTTTCCGATAAGAGCATGGAGGCTCAGGCTCCCCCTGAAGCCGCAG
GATCTCCTCTAGACCTATCTCTCACTATGGCCCCCGGGGCTCCTTGGTCTGTTCTTCCTTCTGGTCGCGGTGGTCGCCAT
CGCAGCGGCACGGGATCAAGGCTCTACTCTTGCCTCTTCTGTGAGAGGAAGTTCCTCAAGTCGCATGCGCTAGGGGGCCA
CCAGAACGCGCACAGGATGGAGAGGGTCGTCGGCAGCTGGAAGGCCCACCTCTACCTCCCTGACCATCATCATGCCGCGG
CAGCAGCCACCGGTATAGCGCGTC---------T---TGACACCGACGATGACAAGCACCAGAAGCTTGATCTTAATCTC
AAGCTTTAATTTGCTCTAGCTCCTGTGTACACTAAGCAGTACGCACAGGGCAGGCT-TAGCTCCATTGGCCATTGCTATA
TACGGTCACTAGCATATGTGCGC---------------------------------------------------------
------------------------------------------------------------------------------CT
TGTC-----------------CCTT-------------------------------------------------------
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---------------------------------------------------------------------CATGTATGAAA
TCACAAGGCTTTTCTCATTCTTCTGCATGGCGCC------ATGCCAGCGATCGACCAGGATGAGAAT-------------
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------------------------TATGAC---TAATTCCCAGGCTGTTGCATTTTTCCTATGCA---------------
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----------------------------------CCCACCTGCATGTAAATAAAACCAAATCCGTCCTCCTTTTCCATCA
AGGTGCAAACGTTATATACA-------------------------------------------------TACTCCCTCCG
TAAAAAAATATAAGAGCGTTTAGATCATTACTTTTAGTGATCTAAATGCTCTTATATTTGTTTACAGAGGGAGTACTTTT
TTCAAGGCTTTTGGAATCCAAACATAATTTTTTGCAAGTGATTCCCAAACAGAATTGTTAGCAAAGATGGCTTTCCATAA
ACATCTTCTTAAAACGGGTTTCGGTAAAATTGTTTTTAATTACTCGCTATACAAACAACTACTAAAAGGAACATATCCAA
TGACATAATTGTTGGGAATCGTAGCATAATTTTAAAATTTTCCTACGCTCACCAAGATGCATCTATGGAGTATACTAGCA
ACGAGGGGAAAGGAGTGCATCTACATACCCTTGTAGATCGCGAGCGGAAGCGTTCCAATGAACGTGGATGACGGAGTCGT
ACTCGCCGTGATCCAAATCACCGATGACCGAGTGCCGAACGGACGGCACCTCCGCGTTCAACACACGTACGGTGCAGCGA
CGTCTCCTCCTTCTTGATCCAGCAAGGGGGAAGGAGAGGTTGATGGAGATCCAGCAGCACGACGGCGTGGTGGTGGATGT
AGCGGGATGCCGGCAGGGCTTCGCCGAGCATATACGAGAGAGAGAGGTGTTGCAGGGGGAGAGGGAGGCGCCCAAGGCTG
TAGTGTTGCTGCCCTCCCTCCCCCCCTATATATAGGCCCCCTTGGGGGGGGGGGGGGGGGGCGCCGGCCAAACTGTTGGA
AATATGCCCTAGAGGCAATAATAAATGGTTATTATTATATTTCTTTGTTCATGGTAATTGTCTATTATTCATGCTATAAT
TGTATTGTCCGGAAATCGTAATACATGTGTGAATACATAGACCACAACCTGTCCCTAGTAAGCCTCTAGTTGACTAGCTC
GTTGATCAACAGATAGTCATGGTTTCCTGACTATGGA-------------------------------------------
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-CATTGGATGTCATTGATAACG----------------------------------------------------------
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--------------------------------------
>chrUn_1
GGCTCGCCCTGCCGTTCCTCCCTACGTGTTCCTCCGTGGCTGGCCATGGCTCACGGGAGCAGGCCA--------------
-TTCGACGTTAGTGCCACTCGCAATAACTAACGCGGATAGCTCCCAGATTTAGCATGTGGAACATTTCCTTTCCTTGCCT
CGCTTCACCCTATAAAGACGTCCATCATCAGAGCTTAGACTTGAGCTTGCTATGTGTAGGCTAGAGAGTGAAATCCATTT
GTAGGAGAAGCCAAGCTGGTAGATATGCAAGTATCCCGGTGTCAGTGACTAAAAATATCCACTCGTGTGGACTCGGTGCG
GACAAGCCCATGGCGCGCGTGTCACCTATATGAGTGTGTAAAGATTGGCCGAACATATTGAGTCGCGCTTGCGAGATCGG
GACTGAGCACCCAATCAATGGTTCATGTGGCGTCACGTGCTGAAGCAAGAGCAGGCATGTTTGCTCTTTATAACTTCCGT
TATTTAGTCTCCACTGATACTTAACCATGCACCGACCCGTTAGTTCTGGGT-----------------------------
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----------------------TTAGACGCCCGGAGTACT----------------------------------------
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--------------------------------------
>chrUn_1
GGCTCGCCCTGCCGTTCCTCCCTACGTGTTCCTCCGTGGCTGGCCATGGCTCACGGGAGCAGGCCA--------------
-TTCGACGTTAGTGCCACTCGCAATAACTAACGCGGATAGCTCCCAGATTTAGCATGTGGAACATTTCCTTTCCTTGCCT
CGCTTCACCCTATAAAGACGTCCATCATCAGAGCTTAGACTTGAGCTTGCTATGTGTAGGCTAGAGAGTGAAATCCATTT
GTAGGAGAAGCCAAGCTGGTAGATATGCAAGTATCCCGGTGTCAGTGACTAAAAATATCCACTCGTGTGGACTCGGTGCG
GACAAGCCCATGGCGCGCGTGTCACCTATATGAGTGTGTAAAGATTGGCCGAACATATTGAGTCGCGCTTGCGAGATCGG
GACTGAGCACCCAATCAATGGTTCATGTGGCGTCACGTGCTGAAGCAAGAGCAGGCATGTTTGCTCTTTATAACTTCCGT
TATTTAGTCTCCACTGATACTTAACCATGCACCGACCCGTTAGTTCTGGGT-----------------------------
--------------------------------------------------------------------------------
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----------------------TTAGACGCCC------------------------------------------------
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--------------------------------------------------------------------------------
-------GGAGTACTAACCTTTGATCTGGCCCT-AATATTTTGTCTAGTGGGAATATGGTTCCCATAGATGT--------
--------GAAAAAAAA-----------------------------TACTCAATAACCTGATGGC------GTGTAA---
--------------------------------------------------------------------------------
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------------ATTACATTACATCTTCTAGCCATGATGTAGCCAATAGATGTCCTTGTGGTTATACGTCTTCTTTAATT
TGGTAGCTGCCCATAGACAGGAGGGGGAATAAAAAGGGCGGGAAACGGGGGACTAAAAATACTCAATAACCCGCTATCAT
AATGGGCTCCCAGATTTAGCAAGTGGACTGCTTCCTTTCATGGCCACCAGCCCCCTATAAAACTCAGTTGCCACCGGCCG
CCATTGAGAGCTCACA---CCTCGTCACACCATCTTCTCCGACAACTGCATGGCCGCTCAGGCTCCCCCTGCAGCTGCAG
CTGCTCCTCTAGACTTGTCCCTCACGCTGTCCCCCATGTATAATTTGGCTGTTCTTCCTAGCGGCGGCGGCCGTCGC---
AGAGGGGGCGCAAGATCGTGGCTCTTCTCTTGCCTCTTCTGTGAGAGGAAGTTCCTCAAGTCGCAGGCCCTAGGGGGTCA
CCAGAACGCTCACCGGAAGGAGAGAGTCGTCGGCACCTGGAACACCCACCTCTACCTCTCTGACCATCGTCACGCCGCAG
C--------------------GTC---------T---TGACGACGATGACGACAAGCACCAGAAGCTTGATCTCAGCCTC
AAGCTTTAATGAGCTCTAGCTCGTT-----------CAGTATGCATGGGGCAAGCT-TAGCTCCACTAGCCACTGCTATG
CGGTCCGTAC----------------------------------------------------------------------
--------------------------------------------------------------------------ACTACT
TGTC-----------------ATCT-------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------CATGTATGAAA
TCTAAAGGCTTATCTCATTCCTAGCTTCAAAAAGCAATTAATGCCAGCGATCTATAAGGATGAGAAT-------------
--------------------------------------------------------------------------------
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------------------------TATACGTAATAATTCCTAGGCTGGTGCGTTTTTCCTAAGTG---------------
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----------------------------------CCCACCT-CATGTATAGAAAACCACATCCGTCCTCTCTT-------
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--------------------------------------
>chr3B_2
-GCGCGCCCTGCCGTTCCTCCCTACGTGTTCCTCCGTGGTTCGCCATGGCTCACGGGAGCAGGGCGCCCATGTTGGACG-
-TTCGACGGTAGTGCCACTCGCAATAACTAATGCGGATAGTTCCCAGATTTAGCAAGTGGCATATTTCCTTTCCT-ACCT
TGCTCCTCCCTATAAACC--TCCATCATCAGAGCTCAGACTTGAGGTTG-TATGTGTAGGCTAGAGGGTGAAATCCATAT
GTAGGAGAAGCAAAGCTGGCAGGTATGCAAATATCCCCGTGTCGGTATGTAAAGATACCCGCTCATATGGACTCGGTGCG
GCAAATCCCATCAGGCA----TCACCTATATGAGTGCCTAAATAGTATCCAAAAAAATTGAGCCCCGCTTGCGAGATCAG
GAC-GAGCATCGAATCAATGGTTCATGTCACGTCACACGCTCAAACAAGAGCGGGCATGCTCGCTCTTCATACTTTCCGT
TTTTT-GTCTCCATTGATACTTAACCGTGCACTGACCCATTGTGTGGGGTTTAGGCCCCTCCCAATGCTCCACCTTGTAC
ATGTGCTAAGGCTGCCATGTAGGCAAAAAGTCTGATGTGGCAAGGTAATTAAGAGAGAGATGAGTGTGGTGACCCCAGGA
AGAAACAATGCCAAGCGCGAGAACCTAGGCAAAACACTTAAATTGAAAGGATCCCACCAATCCGTGAAGAACTTTAGTTG
CAAAATCATTAAATGAAGGATGCTTAGCACCAACAAGTTAAGCACCGCATTGGGGGCTTTAGTTGCTAAAGTTTTTAATG
TGCTTAGCACCAACAAGTTAAGCACCGCATTGGGGGCTTTAGTTGCTAAAGTTTTTAATGTGCTTAGCACCTCATGTAAG
CACCAATGCATTGAAACTAGCCTTAGACGCCC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GGAGTAGTAACCTTTGATCCAGCCTTAAATAATTGGTCTAGTGAGAATATAGTTCAGGTGGCCCGCTGGTTCG
CTTTCCCAGAAAAAAAACTTAATGAACTTTTTTT--------GAGGTACTCAATGACCTGATGCTGATGGCGTGTACTCC
CTCCGTTTCTTTTTACTCCGCATATAAGATTTGATCAAAATCAAACTACACAAAGTTTGACCAAATTTATAGAAAAAACT
ACATCTACAATACTAAAACTACATAGTATGAAAATACGTTTCATGGTGCATCTGATGATATTTATTTCATATTGTGAATG
CTTATATTTCTTAATATAAAGTTAGTCAAACTCTATAAAGCTTGACTTTGACCAAACCTTATATGCGGACTAAAAAGAAA
CGGAGGGAGTACATTACATTACATCCTGTAGCCATGATGTAGCCAATGGATGTCCTATTTGGTATACATGTTCTTTAATT
CGGTAGCTGCCCGTAGACCGGAAG--------------------------------------------------------
---GGGCACCCAGATTTAGCAAGTGGTCTGCTTCCTTTCATGGCCACCAGCCCCCTAT-AAACTCAGTTGCCACCAGCCA
CCACTGAG--CTCACACCTCCTCATCTCAACGTCTTCTCCGACAAGTGCATGGAGGCTCAGACTCCT---------GCGG
GATCTCTTCTAGACCTGTCTCTCACTATGGCCCCCGGGGCTCCTTGGTCTGTTCTTCCTTCTGGTCGCAATGGTCGCCGT
CGCAGTGGCGCAGGATCGAGGCTCTACTCTTGCCTCTTCTGCGAGAGGACGTTCCTCAAGTCGCAGGCGCTGGGGGGCCA
CCAGAACGCGCACAGGATGGAGAGGGTCGTCGGCAGCTGGAAGACCCACCTCTACATCCCTGACCATCATCATGCCGTGG
CAACCGCCACCGCTATAGCGTGTCTTGACAACGT---TGATGACGACGACGACAAGCACCAGAAGCTTGATCTTAATCTC
AAGCTTTAATTTGCTCTATCTTGTGTCTACATTATGCAGTACGTACGGGGCAAGCT-TAGCTCCATTGGCCATTGCTATA
TACGGTCACTAGCATATGTGCTGATTGTCCCTATAAAAGGAACATATCCAATGACATACATGTATATTGATTTGCAAATA
TAATTAATATACATGTATGTCATTGGAAACCTCACCTATTTATATGTGTCGTAAAACGATCAAGAGAGCATGGTACTGCT
GCTTGTGTGATCTCATCTTGTTTTTTTTTTTGACGTGTTTCACTTAGATATTTGGATGAGGCTAGTACTTTGATGTCATT
CTAGAGCAAAATGCATGGATGCTCATTGGTTCATGGATGGCTTGCTAGCCATGTGTTAGGAGACCAGTTGTGTGCTCGCG
CTGGTTCGGTCATTGTGTCTCACATTTCCTTCTTATCAACTAATTAATAAAAAAACACATAGGCTCCTTCCCTATTGGTC
TTTTTTTTTGGATGATGATGGTTTCCAATGTACTCACTTTAACAAAACAAAAACACATTTAGCATCTCATTTTCGGACAG
GTCATTTTTTGTTAAATAATATGATCATTTGTTACCATTTTTAGAATCATTTGTGCCTTTTTCTTTCCGAGCAAATTCGT
TCATGTCTGATAGCGAACACATATGAATATGGTCCCTTTTTTGGACCAATAATATAGCAAAGGTAAAGTAGATGAATGCA
CTGGAGTTATACTAAAGAAATAAGAATGGAGCTAAGGCCGAAACAAATCTCATCATGTGCTAATATCTTAAGCTTGGATC
CCATTGCCTTTTGCCTGCACCAATAAAGTGCCGAATGAGCATTGTCTTGCATGCCCAAACATGATCTTTATACTCGCATA
GGAAGGATTTGACTAATCAGTCTGTGATACATTTTTGGTCCTTGGAGGCATCTACTTTTGGTCATGTTTAGGTTTTCTTA
ATATGTGCCGACATGCATGTATGGCTGTCTGCACTCGCACGTACTACCACCATTAGTATCCTATGTCCTAACTAAATGGC
CTTCATTGGCACTTAATTAGTCTACTGCCCCTCAGAAAACAAATATATGTCTCTGGCACACCCCTCATCTAGAATGCCAC
GTTCAAATTAGTCCATCAGAAATCTATTTGAACGCGGCATACCAAAAACCAGAAGCATGGTCGTTGAACTACTGTAAAGT
GTTGAACCTGTGATGGAAACCTGACACACACCTCCGTGGGAAAAGCAAGACATCTACACCGGAAGTGAAGTGAGGTGTGC
CTTAACTTCTGTGGAGTTAGGCGCCTCTTTTCGTCGTCATGTCTAGATTTTCCTGTTCCGTGCCTTTCTCCCACAGAGAA
AAAACGGAAGGTTTTTTTTTTCATATCACAAAGTATCACGTAAACATGCTACGGGTAGGGTCAAGGACACATTCATCAAA
ACATAAGGCTAACGCACATGGACACACAATAATAAAATAGTATTAGCAAGCTCAATAATGCGATGATGTGTGAACTGAGA
ATATCTCAGATGGTCAAGTTCCTTGTGATGAAACCAGCCCACCATGATTTAAGTATTAGAATTGGCATTGCTGCTCGTAT
TTTCATGAATTTATTTCATACTTTCGTAGGGCTGGGAGTATGTGCGTGTATATGAGCATCTATGATTGTATTGTTTCAAA
ATAAACACGATGAAGCACGGTCATCAACACATATCACTAGCCACCAAATTGCTAATGATCTCTGCATCTTTTTCTCTTTT
TGGTGGCAATGATCTGCTAGGGCGCGAGGCTCCTATGATATATATATGGCTACCCGACAGATTTAGCAAGTGCTAGCCTT
CCTTTCACGCCCATGACATCTCCACCTACTCCTATTCAATTGCCCTATCTATCTCTAAAGTTCAAATCCACACAACAAAG
CTCGTGCAAGCTCAGCTTAGCTAGACGACGGCGGACCATCTCTTTAACTATGTAAAACATTTGTGTTTGTCATCCTCTTT
TAATAGTTGGCCCCAGCTTGCAGTGTCCCCTAGTAGCTGATACTTTCGCTCTGCGAAATTGTGTTTTTCTTTCTTTCGAT
TTTTGGCTTGTTTTGTGTTGTTGTCTCCATGGACCTCTTTTTATTTTAATCGTACAAGAAGAACTTCAGTGGACATGGTT
ATTGCTTTATCTATAAAGTGGGACGAAATTCTATTCCAAGTATAAAGCAAATCAGCAAAGAGTACGAAAATCAGCAAATA
TAGTACAAGCTTGTACAAACATGTGCATGGAGATGAACTAGTCAACAAAATAGTAATTAACTCAATAATCCTAAGCTTAT
CAAAAGTGGGCTTACAAATTGGATACATACGTAATTGAATTTTACTGAGGGTCCCCGTGTAATTTTAACCATACATCTCC
ACCTCATCCCATATGTTTCATCTGTATAAC---AAATTCAATAGATGTAGCATTATTCATAATTAGCTGGAACCTAAAAG
GAGAGCTCCACAGTCACTTGGGACATCCAGACCGTGAGATCACATCGGCGATGGCCAGGATTGCAAGTGACAATTATGTT
GGGTAATGGCCGTAATATTCCTCTTTTTCTGTCATCACTTTTCTCGTATGATTCCAACTGCCTCTACCTACAAGGATTCA
TTGATTCGGCCTCACTGCTCATAGCGCACAATTGGTCATCCACAGGAAGCCCAAATTAATGACCCACACCTCAGTCCCAA
GGCCGTCTAAGTTGCGTGACACATGTTTGCATGACACATATTCGATCAAGAGCATCCATGCCTGGTTGGAAGCTAAAAAC
ATCGCTCACCAACTATTCAGAATGGTAGCATTCAACAATCTTAAAAACATACCCACCAGTTTATTAGAATAAACTGGTAC
TACCTTCGTTCTGGCTTATTGGCCCCCTTCATATTTTGTGTCAAATTTTGACCATATATTTAACTAACAAAATTTTAATG
CGTGTCACTAAAAATTATATCATTGGATTTGTATTTGAAAATAGTTTCGGATCATCTTATTTTTGGTACGTATAATTTAT
ATTATATTAGTTAAAATCAAGATCAAAATATGACCCTATATACGAGGGGACTAATAAATCAGGTCAGAGGTAGTAGCTAT
ATCTTGGCCTATCCCACTAGAGTTGGTTTGTGGGGTTCACCCCTGTGAATAAAGCACAATAAGAAATTGATGGTCGACAA
GGATCACTACTACCAAACTGCTTTACTGCTGTAGACGTGCTGGACCTCGAACTCATATGTCGTTATTAGCTACAACTGTT
GTGGCCCACTTTATGCTTGCTATAATGCCTCCCGCCCTCCTGCATTTAGGAAGTGCTATGCTTCCTTTCAAGGCGGCTAA
CAAGCCTCCAACACCTCTAGCTAGGGAAGAAGGTATCTTCCTGCTGGAGCCGGACGGCAATTATTCATGTACTCCCTCCG
TAAAGAAATATAAGATTGTTTAGATTACTA-TTTTAGTGATCTAGACGCTCATATACTTCTTTACAGGGGAGTATCAATG
GAGGCCACTTCTTTTTGACATTGTTAGTGTACGTTGCCACACATGCATGCACTGCTAAACTGTTTGCGCTACTCCTACCG
CTGTATGCGCTACTCCTCCTAGCGGCAGCAATAGGATCATGGGGTGATGGGTATGAACCTGGGCTA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------GGAACATGTCCATTTTTCCTGCTGTATT
AACCACTAATGGACACTGTACATTTGGCTGTAGCCCTTGCCGATATTTAACAGTTGATGAGCGTGAAACCCTTTAGTACG
GGGTTTAAGCGTGCAGTGGATAATTGTATAGTCGTTACCTTTGATCCAACCTTAATTTCTGTTATAGTGGGAATATAGTT
ATGTGGCCCCGGTTGGCTTTTTCAAGAAAAATACTCAATAACTAATGGAGTGTATATTACATCTTGTAGCCATGATGTAG
CCAATGGATGTCCTTGTGGTTATGTGTTCCCTGGTAGCTTCCCGTAGACTGGAGGGGGCATCCAGTGCCAATACTTAATG
GGCTCCCAGATTTAGCAAGTGACGTGCTTCCTTTCATGGCCACCACCCCCTTTATAAAACTCAGTCTCCACCGGCCGCCA
CTAAGAGCTCACACCTCCTCGTCTCACCATCTTCTCCGATTAGTTCATGGAGGCTCAAGATCCCTCTTCAGCAGCAGCAG
CTCCCCTGGACCTGTCTCTCACGCTAGCCCCCATGTCTCTTTGGGCTGCTCATCCTTCTGGCGGTGGCGGTCGCCGCCGC
AGTGGTGGCGGCACGACATCGAGGCTCTTCTCTTGCCTATTCTGTGAGAGGAAGTTCTTCAAGTCGCAGGCACTAGGAGG
CCACCAGAATGCGCACAGGAAGGAGAGGGTGGTCGGCAGCTGGAACCCGCACCTCTACCTCCCTGACCATCATGGTGACG
CCGCGCTGACCACTGCAACGGCGCGCCTTAAAAGCAACGACGACCACAAGCTGCAGGAGCTTGATCTTAACCTCAAGCTT
TGATTAGCTCTATCTCGTGTGTACGCGACAGTACGTAC
>chr3D_987
--------------------------------------------------------------------------------
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-----------------------TGG-----------------CCACCACCCCCTTATAAAACTGGGCAATCACCGGCCA
CCACCAAGAGCTCACACCTCCTCGTCTCACCATTTTCTCCGACTAGTGCATGG------AGGCTCCCATGGCAGCTGAAG
CAGCTCCCCTAGACCTGTCTCTCACGCTGGCCCCCATATCTCCTTGGGCTGTTCTTCCTTCTGGCGGCCGTAGCCGCCAC
AGAGGGGGCGTGAGAACCAGACTCTTCTCTTGCCTCTTCTGCGAGAGGAAGTTCCTCAAGTCTCAGGCGCTTGGGGGCCA
TCAGAACGCGCACAGGAAGGAGAGGGTCGTCGGCAGCTGGAACGCCCACCTCTACCTCCCTGACCATCCTCGACTCCCGG
TGCCGGACACCGCGATGGGGTACCTTGTCCTTGATGATGATGACGAAGATGACAAGCACCAGAAGCTTGATCTTAGCCTC
AAGCTTTAATTAGCTCTAGCTCGTGTGCATGCTGCACAGTACGTACGGGGGCTAAGCTAACTCCATTGGCCATTGCTATA
CAGTACGTAC----------------------------------------------------------------------
--------------------------------------------------------------------------ACTGCT
AGTTTTGTGTAATGACTTTGTCCCT-------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------CATGTATGAAA
TCTCAATGGTT-TCTCATTCTT----------------------------------------------------------
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--------------------------------------
>SNPs
---------------------------------------------------------------------S---SSSSSSS
S-----------S--S----------------------------SS---------------------------------S
--------------------------------------------------S-----------------------------
---S----------------------------------S-----------------------------------------
-----------------------S--------------------S----S---------------------S--------
-S--------------------------------S----------------------S--------------------S-
-----------------------------S--S-----------SS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS------------------------------------------------------S----------------S-
------S------------------S--------SSSSSSSS----------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S------------------------------------S-
-------------S----S-------------------------------------------------------------
-------------------------------------------S------------------------------------
------------------------------------S-----S---S------------------------S---S----
----------------S---------------------------------------------------------------
-----S---S-------S-----------------------------------------------S--------------
--------------------------------------------------------------------------------
--S-S-------S-------S--------------------SS-------------------------------------
----------------------S-----------S-----------S-----S---------------------------
---------------------SS---------------------------------------------------------
--------------------------------------------------------------------------------
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-----------S-----------SSSSSSSSSSS------------------S-SS------------------------
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---------------------------S------------S--------------------S-S----------------
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------------------------------------------------S-S-------S----------SS--SSSS-S-
SSSSS-SSSSSSSSSSSSSS------------------------------------------------------------
----S----------SS--------S-S--S-------------S-S----S----S--S-------S--SSSSS-SS-S
SSSSSSS---S-SSSSSS--SSSS--S-S-SSSSSSSSSS-SSSS--SS--SSSS-SSSSSSSSS-SSSSSS-S-S-SSS
SSS-S-S-SSS-SS-SSSS-SSS-SS-SSSSSSSSS-S--SSSSS-S-SSSS-SSS-S--SSSSS-SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-SS----S---S---S----S--S-
SSSSSSSSSS---S-SS---SSSSSS-SSSS-SSS-S-SSSSSSSSSSSSSSSSSS-SS-SSSSSSS-SSSSSSSSSSSS
-SSSS-S-S-SSSS---SSSSSS--SSSS-S-SSSS--------------------------------------------
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---S--------S---SSSSSS----------------------------------------------------------
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--------------------------------------
>forward_957
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---------------------------------------------------------CAAGTCCTGCGCGTATACCT---
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--------------------------------------
>reverse_6056
--------------------------------------------------------------------------------
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-------------------------------------------------------GTTCAACACACGTACGGTGC-----
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--------------------------------------
