>input_sequence_72775
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ATGAAATATTTCGGCGGACACCTCCCCGC
TTCCCTCCCCGCCAGGCGGCCCGAGATCCCAATTTTCGTCCAAATTTCCAAGATTTGCCGGCGCTTCGTCGAACCAAAAC
AGCAAAAACCACAGATTAGTCCCCTCCCTCCACTTTTACCCAGCCTAAATTTCCCTCCGAAACTCAAATCTTCTGGCCTG
CTCCCTCCCTCCGACCTCCGATACAAATACCCATCGATTCTTCCCTCCCTTCCCCAGCCCCACCCGATTAACCTCCCGGC
CTGGTACCACCAACCTCCAATCCGAAGAGCCTCTGCTCGTATGAGCTCCAAGATGGCAGCTGACAGCGGCGACCAGGAGA
ACCTGCCGCCCAGTACAACGCCTCCGACTGCGACGGCTGCTGTCGTCCGCCCTCGTCATTTTGGGGTCAAGAAAGGCCAG
ATGAAGCGGCTCGGCAGGGCGCGGAGGCGGGCGCCGCTCAAGGACATCACCAACCACTTCGCCGTGGAGACTGCATCTGC
CGAGGTGCAAGCTCTGCAGCAGCCGGAGGAGGGGTCGGAGGGGGGCACAGCGAAGGAGGAGCTGGCGGCGCAGACGAACG
CGCTTGCCAGTGCTGCGGCTGTTAAGGCGAGGAGGAACTCGCTCCGGAAGGAGTTTAGATAG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr2A_1_TraesCS2A01G225500
TCTTCTTTGGCAGTGTGCATACAAGATGTCTTGTTGATGCAGAGACGGGTGTAATTAGTATCTTCGCGATATTAATTTAT
CTATACCTACTATTAAAGGGAATACGTATTCTTGATTTGGTTTAGTCCTTTTCGTTTGATTTGAGTGCATGCTAAGCGAT
CTGGGCCAGATACTTGTACGTTGATGGGCCTTTTATGGGCTTTTATAGAGACCGCGAATAATAATTAGGTCTATACCTAC
TATCAAAGGGAATAAGTATTCTTAGTTTGGTTTAGTCCCTTTCATTTGGTTTGAGTGCACGCTAAGCGATATGGGCCAGA
TACTTGTACGTTGATGGGTCTTTTATGGGCTTTTATAGAGAACGCGAATAATAATTAGGTCAAAA----TCAATATTGTC
GGAATTGATCACAGGAACTCCTATCTGGATGTCTTATGTAACAACCAACGACCTATACACCATTCACATTTATTAATCCC
AACTCGTTCTAAATATACGAGTGGCAGCCCTCGTGTTTAGGGCGAGCTAATTAAAGAAAGGACTTGAGGT-AAAAAA-TA
TAACATAATTTAAAAAAGATTTGTAGGCTTTCATGTGTTGGGCTACTAAATTAGAAAAGAAACAATTTGATTTCCGACTA
AAACGGGTAAGGACGTCATGGTAACTAAAGGAAGAATTTTATTTAAATGGAATCGATGGAAGATTATGCCCGGCAAAGAA
AATATAACACGGCTAAATTGCATTGTATTTTTTTATGTTCATTTTATAG-AGGATGCTATGAGACATTATACTTGAATAA
AACATTA-TTTTTT---TCCGTTGCAACGCACGGGCATATGTGCTAATTCTTTTAAAAAAATGAGAGTGAGAAAAGGCTG
TCACGCGGCCACGATTCGCCATGGCGCCACCGACCGCCAATTTTGACGTCACAAAACGAGCTGCGCACAGCGCATACCGC
CCACCATCCACGTGAATCTCCCTCCTAACCAAAGCAGCAGAGAAGCCCAAAATGAAATATTTCGGCGGACACCTCCCCGC
TTCCCTCCCCGCCAGGCGGCCCGAGATCCCAATTTTCGTCCAAATTTCCAAGATTTGCCGGCGCTTCGTCGAACCAAAAC
AGCAAAAACCACAGATTAGTCCCCTCCCTCCACTTTTACCCAGCCTAAATTTCCCTCCGAAACTCAAATCTTCTGGCCTG
CTCCCTCCCTCCGACCTCCGATACAAATACCCATCGATTCTTCCCTCCCTTCCCCAGCCCCACCCGATTAACCTCCCGGC
CTGGTACCACCAACCTCCAATCCGAAGAGCCTCTGCTCGTATGAGCTCCAAGATGGCAGCTGACAGCGGCGACCAGGAGA
ACCTGCCGCCCAGTACAACGCCTCCGACTGCGACGGCTGCTGTCGTCCGCCCTCGTCATTTTGGGGTCAAGAAAGGCCAG
ATGAAGCGGCTCGGCAGGGCGCGGAGGCGGGCGCCGCTCAAGGACATCACCAACCACTTCGCCGTGGAGACTGCATCTGC
CGAGGTGCAAGCTCTGCAGCAGCCGGAGGAGGGGTCGGAGGGGGGCACAGCGAAGGAGGAGCTGGCGGCGCAGACGAACG
CGCTTGCCAGTGCTGCGGCTGTTAAGGCGAGGAGGAACTCGCTCCGGAAGGAGTTTAGATAGAGTTCAGTTCATTGTACA
GTGGGATTGGGTAATTGGACGGAATTCATTATTTGTACTATTCTGATTTCATTCTCCAAGCCCATGGTTCATTGGGCTGG
ATTTTGCTCGCTGGTTTCCGCTTTCCTCTATTGTTGATTATAGGAAACGAGGTTCTGAGTAAAAAGGAAGATGAATTCAA
ATCGATATCTCATTGATAGAAGTATGAGTCTTAATCTGGAAGTGTTCAATGACTCATTCACGGAAATTTCGATGCTCTTA
GTTGACTATATGTTTATCTACGACGCGTTTGGTTCCGAAAAAAAGGCGCGGCTTCTGATTACACCGACTTCCAAAACCAT
AGCTGGTGTTTGTTTCGTGCACGACGTTTTCCGTAGCAGCGCTTCCTGATACTTTGCTTCAGAAAAGCTAAACCGCCTGA
TCGGAGGAGATTAAAAAAACAGGACTTGGCCGCACCAACCAAACAATGGATGTATTGCGTAAAATTAATCGGAAGCGGTG
CTTCCTGATACGGCGAAGCGAATGCGTTACCGGGGCCGAACCGAACGCGTCGCTAGTTCCTTCGTATCTCTTTAGTGTTC
TGAGTTTGAGTCATTTATCCGTGTCGGGCTGAAGGTCTTTAGAGCAACTCCAACAGCCGACCCAAAAGAACGACGTTTTT
ATCCGTTTGGGTTGACCGCCCGTCCGCCGTCCGTCCTCTTTTAGTTTTGGGTCGGTAGTGCGTCTAACGGGCCGATCCAT
TTTATGATTGCGCGTGTTTTAAATCATGGCGTCGCCCTGGTTTTGACGCACCAGCGCGCGGAAAAGGTTCACCCGCGCGG
GGGAAAGCGGCCTAACGCGCGCTGGTTTTGGCGCTCCAGCGCGTGGGAAAGGTTCGCGCGCGCCGCGGCCGACGCTCGTT
ATAAAGAAGACGGTCCCTCCACACTCTGTCCGCCGCCCACTCTCGTCGCCTCTGCTCGCCGCCCATTCCCGCCGCCTCTG
CGCCACCATGTCGATCCGCCGC
>chr3A_75
ATATATCTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TACCTAC
TATTAAAGGGAATAGGTATTCTTGGTTTGGTTTAGTCCTTTTCGTTTGGTTTGAGTGCATGCTAAGCGATATGGGCCAGG
TACTTGTACGTTGATGGGCCTTTTATGGGCTTTTATAGAGACCACGAATAATAATTAGGTCAAAATAAATCAATATTGTC
AGAATTGATCACAGAAACTCCTATCTGGATGTTTTATGTAACAACCAACGACCTATACACCATTCACATTTACTAATCCC
AACTCGTTCTATATATATGAGTGGCAGCCCTTGTGTTTAGGGTGAGCTAATTAAAGGAAGGACTTGAGGTAAAAAAA-TA
TAACATAATTTAAAAAAGTTTTGTAGGCTTTAATGTGTTGGACTACTAAATTAGAAAAGGAATAATTTGATTCCCGACTA
AAACGGGTGAGGACATCATGGTAACTAAAGGAACAATTTTACTTAAATGGAATCGATGGAAGATTATGCCCGGCAAAGAA
AATATAACATGGCTAAATTGCATCGTATTTTTT-ATGTTCA-TTTATAGAAGGATGCTATGAGACATTATGCTTGAACAA
AACATCA--TTTTT---CCCGTTGCAACGCACGGGCATATGTGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr4A_78
---TATCTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TACCTAC
TATTAAAGGGAATAGGTATTCTTGGTTTGGTTTAGTCCTTTTCATTTGGTTTGAGTGCATGCTAAGCGATCTGGGCCAGG
TACTTGTACGTTGATGGGCCTTTTATGGGCTTTTATAGAGACCGCGAATCATAATTAGGTCAAAATAAATCAATATTGTT
GGAATTGATCACAGGAACTCCAATCTGGATGTTTTATGTAACAACCAACGACCTATACACCATTCACATTTACTAATCCC
AACTCGTTCTAAATGTATGAGTGGTAGCCCTCGTGTTTAGGGCGAGTTAATTAAAGGAAGGACTTGAGGTA-CAAAA-TA
TAACATAATTTAAAAAAGATTTGTAGGCTTTAATTTGTTGGGCTACTAAATTAGAAAAGGAATAATTTGATTCCCGACTA
AAACGGGTGAGGACGTCATGGTAACTAAAGGAAGAATTTTACTTAACTGGAATCGATGGAAGATTATGCCCGGCAAAGAA
AATATAACACGGCTAAATTGCGTCGTATTTTTTTATGTTCATTTTATAAAAGGATGCTATGAGACATTATGCTTGAACAA
AAAATCA-TTTTTT---TCCGTTGCAACCCACGGGCATATGTGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr4A_79
----ATCTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TACCTAC
TATTAAAGGGAATAGGTATTCTTGGTTTGGTTTAGTCCTTTTCGTTTGATTTGAGTGCACGCTAAGCAATCTGGGCCAGT
TACTTGTACGTTGATGGGCCTTTTATGGGCTTTTCTAGAGACCACGAATAATAATTAGGTCAAAATAAATCAATATTGTC
GGAATTGATCACAGAAACTCCTATCTGGATGTTTTATGTAACAACCAACGACCTATACACCATTCACATTTACTAATCCC
AACTCGTTCTAAATATATGAGTGGCAGCCCTCGTGTTTAGGGCGAGCTAATTAAAGGAAGGACTTGAGGTA-AAAAA-TA
TAACATAATTTAAAAAATATTTGTAGGCTTTAATGTGTTGGGCTACTAAATTAGAAAAGGAATAATTTGATTCCCGACTA
AAACGGGTGAGGACATCATGGTAACTAAAGGAAGAATTTTACTTAAATGGTATCAATGGAAGATTATGCCCGGCAAAGAA
AATATAACACGGCTAAATTGCATCATATTTTTT-ATGTTCATTTTATAGAATGATGCTATGAGACATTATGCTTGAACAA
AACATCA--TTTTT---TCCGTTGCAACGCACGGGCATATGTGCTAATT-TATATAAAAAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr3A_79
----ATCTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TACCTAC
TATTAAAGGGAATAGGTATTCTTGGTTTGGTTTAGTCCTTTTCATTTGGTTTGAGTGCACGCTAAGCAATCTGGGCCAGG
TACTTGTACGTTGATGGGCCTTTTATGGGCTTTTATAGAGACCGCGAATAATAATTAGGTCAAAATAAATCAATATTGTT
GGAATTGATCACAGGAACTCCTATCTGGATGTTTTATGTAACAACCAACGACCTATACACCATTCGCATTTACTAATCCC
AACTCGTTCTAAATATATGAGTGGCAGCCCTCCTGTTTACGGCGAGCTAATTAAAGAAAGGACCTGAGGTAAAAAAA-TA
TAACATAATTTAAAAAAGATTTGTAGGCTTTAAAGTGTTGGGCTACTAAATTAGAAAAGGAATAATTTGATTCCCGACTA
AAACGGGTGAGGACGTCATGGTAACTAAAGGAAGAATTTTACTTAAATGCAATCGATGGAAGATTATGCCCCGCAAAGAA
AATATAACACCGCTAAATTGCATCGTATTTTTTTATGTTCATTTTATAGAAGGATGCTATGAGACATTATGCTTGAACAA
AACATCA--TTTTTTTTCCCGTTGCAATGCACGGGCATATGTGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr6A_79
----ATCTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TACCTAC
TATTAAAGGGAATAGGTATTCTTGGTTTGGTTTAGTCCTTTTCGTTTGGTTTGAGTGCAC-CTAAGCGATCTGGGCCAGA
CACTTGTACGTTGATGGGCCTTTTATGGGCTTTTATAGAGACCGTGAATAATAATTAGGTCAAAATAAATCAATATAGTC
GGAATTGATCACAAGAACTCCTATCTGGATGTTTTATGTAACAACCAACGACCTACACACCATTCACATTTACTAATCCC
AACTCATTCTAAATATATAAGTGGCAGCCCTCGTGTTTAGGGCGAGCTAATTGAAGGAATGACTTGAGGTA-AAAAA-TA
TAGCATAATTTAAAAAAGATTTGTAGGCTTTAATGTGTTGGGCTACTAAATAAGAAAAGGAATAATTTGATTCCCGACTA
AAACGGGTGAGGACGTCATGGTAACTAAAGGAAGAATTTTACTTAAATGGAATCAATGGAAGATTATGCCTGGCAAAGAA
AATATAACACGGCTAAATTGCATCGTATTTTTT-ATGTTCATTTTATAGAAGGATGTTATGAGACATTATGCTTGAACAA
AACATCA--TTTTTTT--CCGTTGCAACGCACGGGCATATGTGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr7A_81
CTATA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CCTAC
TATTAAAGGAAATAAGTATTCTTGATTTGGTTTAGTCCTTTTCGTTTGATTTGAGTGCACGCTAAGCGGTCTGGGCCAAA
TACTTGTACGTTGATGGGCCTTTTATGGGCTTTTATAGAGACCGCGAATAATAATTAGGTCAAAATAAATCAATATTGTC
AGAATTGATCAGAGGAACTCCTATCTGGATGTTTTATGTAACAACCAAAGACCTATACACCATTCACATTTACTAATCCC
AACTCATTCTAAATATATGAGTGGCAGCCCTCGTGTTTAGGGCGAGCTAATTAAAGGAAGGACTTGAGGT-AAAAAA-TA
TAACATAATTTACAAAATATTTGTAGGCTTTCATGTGTTGGGCTACTAAATTAGAGAAGGAACAATTTGATTCCCGACTA
AAACGGGTGAGGACGTCATGGTAACTAAAGGAAGAATTTTACTTAAATGGAATTGATGAAAGATTATGCCCGGCAAAGAA
AATATAACACGGCTAAATTGCATCGTATTTTTTTATGTTCATTTTATAGAAGGATGCTATGAGACATTATGTTTGAATAA
AACATCA-TTTTTTTT--CCGTTGCAACGCACGGGCATATGTGCTAGTT-TTTTAAAAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr4A_230
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCTATACCTAC
TATTAAAGGGAATAGGTATTCTTGGTTTGGTTTAGTCCTTTTCATTTGGTTAGAGTGCACGCTAAGCGATCTGGGCCAGA
TACTTGTACGTTGATGGGCCTTTCTTGGGCTTTTATAGAGACCGCGAATAATAATTAGGTCAAAATAAATCAATATTGTC
GGAATTGATCACAGGAACTCCTATCTGGATGTTTTATGTAACAACCAACGACCTATACACCATTCACATTTACTAATCCT
AACTCGTTCTAAATATATGAGTGGCAGCCCTCGTGTTTAGGGCGAGCTAATTAAAGGAAGGACTTGAGGT-AAAAAAATA
GAACATAATTTAAAAAAGATTTGTAGGCTTTAATGTGTTGGGCTACTAAATTAGAAAAGGAATAATTTGATTCCTGACTA
AAACGGGTGAGGACGTCATGGTAACTAAAGGAAGAATTTTACTTAAATGGAATCGATGGAAGATTATGCCCGGCAAAGAA
AATATAACACGACTAAATTGCATCATATTTTTTTATGTTCATTTTATAGAAGGATGATATGAGACAATATGCTTGAACAA
AACATCA-TTTTT----CCCGTTGCAACGCACGGGCATATGTGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr3A_230
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCTATACCTAC
TATTAAAGGGAATAGGTATTCTTAGTTTGGTTTAGTCCTTTTCGTTTGGTTTGAATGCATGCTAAGCGATCTGGGCCAGG
TACTTGTACGTTGATGGGCCTTTTATGGGCTTTTATAGAGACTGCGGATAATAATTAGGTCAAAATAAATCAATATTGTC
GAAATTGATCACAGGAACTCCTATCTGGATGTTTTATGTAACAACCAACGACCTATACACCATTCACATTTACTAATCCC
AACTCGTTCTAAATATATGAGTGGCAGCCCTCGTGTTTAGGGCGAGCTAATTAAAGGAAGGGCTTGAGGT-A-AAA-ATA
TAGCATAATTTAAAAAAGATTTGTAGGCTTTAATGTGTTGGGCTACTAAATTAGAAAAGGAATAATTTGATTCCCGACTA
AAACAGGTGAGGACGTCATGGTAACTAAAGGAAGAATTTTACTTAAATGGAATCGATGGAAGATTATGCCCGGCAAAGAA
AATATAACATGGCTAAATTGCATCGTATTTTTTTATGTTCATTTTATAGAAGGATGCTATGAGACATTATGCTTGAACAA
AACACCATTTTTT----CCTGTTGCAACGCACGGGCATATGTGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr5A_232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TATACCTAC
TATTAAAGGGAATAGGTATTCTTGGTTTGGTTTAGTCCTTTTCGTTTGGTTTGAGTGCACGCTAAGCGATCTGGGCCAGG
TACTTGTACGTTGATGGGCCTTTTATGGGTTTTTATAGAGACCGTGAATAATAATTAGGTCAAAATAAATTAATATTGTC
GGAATTGATCACAGGAACTCCTATCTGGATGTTTTATGTAACAACCAACGACCTATACACCATTCACATTTACTAATCCC
AACTCGTTCTAAATATATGAGTGGCAGCCCTCGTGTTTAGGGCGAGCTAATTAAAGGAAGGACTTGAGGT-A-AAACATA
TAACATAATTTAAAAAAGATTTGTAGGCTTTAATGTGTTGGGCTACTAAATTAGAAAAGGAATAATTTGATTCCCGACTA
AAACGGGTGAGGACGTCATGGTAACTAAAGGAAGAATTTTACTTAAATGGAATCGATGGAAGATTATGCCCGGCAAAGAA
AATATAACACGGCTAAATTGCATTGTA-TTTTTTATGTTCATTTTATAGAAGGATGCTATGAGACATTATGCTTGAACAA
AACATCATTTTTT----CCCGTTGCAACGCACGGGCATATGTGCTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr2D_852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GAGTGTGAGAAAAGGCTG
TCAC-GGGCCACGATTCGCCACGGCGCCACCGACCGCCAATTTTGACGTCACAAAACGGGCTGCGAACAGCGCATACCGC
CCACCATCCACGTGAATCTCCCTCCTAGCCAG-GCAGCAGACAACCCCAAAATGAAATATTTCCGCGGACGCCTCCCCGC
TTCCCTCCCCGCTAGGCGGCCCGAGATCCCAATTTTCGTCCAAATTTCCAAGATTTGCCGGCGCTTCGTCGAACCAAAAC
AGCAAAACCCACAGATTCGTCCCCTCCCTCCACTTCTACCCAGCCTAAATTTCCCTCCGAAACTCAAATCTTCTGGCCTG
CTCCCTCCCTCCGACCTCCGGTACAAATACCCATGGATTCTTCCCTCCCTTCGCCAGCACCACCCGAGCTACCTCCCGGC
CTGGTACCACCAACCTCCAATCCGAAGAGCCTCTGCTCGTATGAGCTCCAAGATGGCAGCTGACAGCGGCGACCAGGAGA
ACCTGCCGCCTAGTACAACGCCTCCGACTGCGACGGCTGCTGTCGTCCGCCCTCGTCATTTTGGGGTCAAGAAAGGCCAG
ATGAAGCGGCTCGGCAGGGCGCGGAGGCGGGCGCCGCTCAAGGACATCACCAACCACTTCGCCGTGGAGACTGCATCTGC
CGAGGTGCAAGCTCTGCAGCAGCCGGAGGAGGGGTCGGAGGGGGACACGGCGAAGGAGGAGCCGGCGGCGCAGACGAACG
CGCTTGCCAGTGCTGCGTCTGTTAAGGCGAGGAGGAACTCGCTCCGGAAGGAGTTTAGATAGAGTTCAGTTCATTGTACA
GTGGGATTGGGTAATTGGACGGAATTCATTATTTGTACTATTCTGATTTCATTCTCGAAGCCCATGGTTCATTGGGCTGG
ATTTTGTTCGCTGG----------------------------------GAGGTTCTGAGCAAGAAGGAAGATGAATTCAA
ACTGATATCTCATTGATAGAAGTATGAGTCTTAATCTGGAAGTGTTCGACGACTCATTCACGGAAATTTTGATGCTCGTA
GTTGGCTATATGTTTCTCTA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr2B_861
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AAAAGGCTG
TCACTGGGCCACGATTCGCCACGGCGCCACCGACCGCCAATTTCGACGTCACAAAACGGGCTGCGCACAACGCATAGCGC
CCACCATCCACGTGAATCTCCCTCCTAGCCACGTAGTAGACTACCCCCAAAATGAAATATTTCGGCGGACGCGTCCCCGC
TTCCCTCCCCGCCAGGCGGCTCCAGATCCCAATTTTCGTCCAAATTTCCAAGATTTGCCGGCGCTTCGTCGAACCAAAAC
AGCAAAACCCACAGATTCGTCCC-TCCCTCCACTTCTACCCAGCCTAAATTTCCCTCCGAAACTCAAATCTTCTGGCCTG
CTCCCTCCCTCCGACCTCCGATACAAATACCCATGGATTCTTCCCTCCCTTCCCCAGCACCACCCGAGCTACCTCCCGGC
CTGGTACCACCAACCTCCAATCCGAAGAGCCTCTGCTCGTATGAGCTCCAAGATGGCAGCTGACAGCGGCGACCAGGAGA
ACCTGCCGCCTAGTACAACGCCTCCGACTGCGACGGCTGCTGTCGTCCGCCCTCGTGATTTTGGGGTCAAGAAAGGCCAG
ATGAAGCGGCTCGGCAGGGGGCGGAGGCGGGCGCCGCTCAAGGACATCACCAACCACTTCGCCGTGGAGACTGGATCTGC
CGAGGTGCAAGCTCTGCAGTAGCCGGAGGAGGGGTCAGAGGGGGACACGGTGAAGGAGGAGGCGGCGGTGCAGACGAACG
CGCTTGCCAGTGCTACGGCTGTTAAGGCAAGGAGGAACTCGCTCCGGAAGGAGTTTAGATAGAGTTCAGTTCATTGTACA
CTGGGATTGGGTAATTGGACGGAATTCGTTATTTGTACTATTCTGATTTCATTCTCCAAGCCCATGGTTCATTGGGCTGG
ATTTTGTTCGCTGG----------------------------------GAGGTTCTGAGTAAGAAGGAAGATGAATTCAA
ATTGATATCTCATTGATAGAAGTATGAGTCTTAATCTGTAAGTGTTCAATGACTCATTGATGGAAATTTTGATGCTCGTA
GTT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>SNPs
SSS-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
---S----------------------------------S-----------------------------------------
------------------S----------------------S--------------------------------------
--------------------------------S---------------------------------------S-------
-----------------S--------------------------------------------------------------
-----------------------------------------------------------S------------S-------
--------S--------------------------------S--------------------------------------
----------------------------------------------------------------------S---------
-----S-------------------------------------------S-----------S---S--------------
----SS---------------S------------------------------------S---------------------
---------------------------S---SS--------S--S-------------------------S---------
--------------------------------------------------------------------------------
-------S---------S-----------------S--------------------------------------------
----------------------------------S-----------------------S--------SSS----------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S---S-------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S-----------------
--S------------------------------------------------------------------S-------S--
----S----------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS
>forward_886
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GTGAGAAAAGGCTG
TCACGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_1942
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GACGCGTTTGGTTCCGAAAA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
