>input_sequence_72749
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----------------------------------------------------AGAACTCACAGAGCAAAGCAACGATC-G
ACAAGTCATTCCATCAATACAACAAGTATCTAAGATGAGGACTAGCCATATGTTGCTCTTGGCGATCGCCTTCCTTGCCC
TAGCATCAGGTACCCATTTGTTGATGTACTGCGTTGCTTCAAAATTTTGTCCAAACAAAGAATGGCCAAGTTCTGATCTT
CCCTTTTCCTCATGGTGAGATTTTGCA-GATGTGATAACGAGGGCGTCAGCGGGCGTTGGAGGAATCCCTTGTACGACAA
GCATTATCCCGTCGCCAAAGCCATGTGATAACAATAGCTGCAATCAGGCATGCATCGACCGTGTGTGGGT---CGGCGGA
TATGGCGAGTGTGTTGCGGGGGCGTGCAAGTGCCAGCAGTGCACATACATTCCTCCCAAAAATGGAAACTAATTAGCTAC
GATTGGATGGCATATTCAACTGAATAATGTGATGAGATCGTAAATGGTGTAGCAACAAGGTTGTTTCACCGTTAAGCCGT
ATGAAGAACGATGAATTTTGTCTTGCTTCTTAAATTATCAGAGACTATAAAGTGAGATATATGATGTTAACACTTAAAAC
GGTGGTATATGATGTTAACACTTGAATTATCCGTATGATAGTAC-TACTAGAAAAAGGATTTGGTAAAAAA---------
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>chr7A_1_TraesCS7A01G445500
CATAGCGACGGGCGGCAATTTGTTTTGCACGAATGTCAACACCCTAGATCCTGTAGACGACAATTTAGATGAGACATCAC
TAACTCGTCTACAGAATTAGCAAATCTGAACAAAAAATTGCAATTAAACATTTCATGAAATTGCAACTATGTCAGGGA--
---GTCCTTTTTTAGCACTACCGTGCCAGTGAGTCACACTTATGCATCAGAGCAACATTCGCCTGTCCCAAGGAATGTAG
TCTAGCAAGGAAAGGAATGAGCGAAAAGATACATTAATGTTTCCACCTACTCTCTTTTATAGCACAGGGGTGAGTTAAGT
ATAGGGATGATCCACTCGTCGTAAATAGCGGCACGTTAGAACATTATCTACATACAAGTGGCTAGGAAAGCGTCCAATCG
TCTTATTTTTGTGACGATGCCTGTTTCATAGGTTTTCTTTTTCATTTCCTTTGTACACCCTTTGTAATTTTTTATCGAGT
AAAGTCTGTTTTAAACCCTCGTCAGACTCAAACCCGAACCTTCAATGCCCTGAAATCGACACTCTGCAGTCTTTGATCCT
GGTCTATCTCAACCCTAAGCCGGTCTTGACTAATTTGTCATGCTAGGAAAATAATGATCTCGGCCGGGATCACTCTCTAC
TCTCGCTGACTACATGGGTCCGCATGTCATATCGATCTTCTTTCCCATAATT-TTTATCTCTCTCCACAAGAGCTGAAAA
TAAATGGTGACTGGAACTATAATACAAGGTTTGCCACGGCTTAGTCGAAATCAGTGAACACCCTGAACCGTGACATATCT
ATACTGTACTGTCAGAACAAAAAACGAAACGAATATTACAACCAAA-AAAAAGAAGATATACACAGAGTAGTAATATTGG
ATGGTAATTATTACAGGGCAACAATATTTGGAGACTAATAATCATGACATTTAATCATAACC-----AAATCTTGTACTT
TAATAATACCATAAATCCAGTATAAAATGGCATCTCCGTGATGTTTTCCTTCAGAACTCACAGAGCAAAGCAACGATC-G
ACAAGTCATTCCATCAATACAACAAGTATCTAAGATGAGGACTAGCCATATGTTGCTCTTGGCGATCGCCTTCCTTGCCC
TAGCATCAGGTACCCATTTGTTGATGTACTGCGTTGCTTCAAAATTTTGTCCAAACAAAGAATGGCCAAGTTCTGATCTT
CCCTTTTCCTCATGGTGAGATTTTGCA-GATGTGATAACGAGGGCGTCAGCGGGCGTTGGAGGAATCCCTTGTACGACAA
GCATTATCCCGTCGCCAAAGCCATGTGATAACAATAGCTGCAATCAGGCATGCATCGACCGTGTGTGGGT---CGGCGGA
TATGGCGAGTGTGTTGCGGGGGCGTGCAAGTGCCAGCAGTGCACATACATTCCTCCCAAAAATGGAAACTAATTAGCTAC
GATTGGATGGCATATTCAACTGAATAATGTGATGAGATCGTAAATGGTGTAGCAACAAGGTTGTTTCACCGTTAAGCCGT
ATGAAGAACGATGAATTTTGTCTTGCTTCTTAAATTATCAGAGACTATAAAGTGAGATATATGATGTTAACACTTAAAAC
GGTGGTATATGATGTTAACACTTGAATTATCCGTATGATAGTAC-TACTAGAAAAAGGATTTGGTAAAAAAAC-ACACCA
AGACATTAGCTTTGCTTTTAGACGAAAAACTATA--CTCCTTGGGGTAGTACATTGTATCCGCTCATCAGATGGAGAGTA
CCCTGCATGGTTGTGACTCGTGAGTTGTACTACTACCTCCGTTTAGTTTACAAGTCCTACGCGTATAACCAGGGCCGTAC
CTGAGAATTTAGAGGCCCGGTGCAAAATAGCACGAAATGAGGCCCTTTAGATAGAAAAATACTCCCTCCG----------
TAAGACGTTTTGTAAACTAACATAGCTTGCTAAAGTGTCTTATATTTTGGGACGGAGGGATGATTTATTATATATTTAGC
ATACTATAAACATAATCTTCCCAATAATAATCCACCTTAGCGGTGATTTATAGCTTACAAAAATGTTTTATATTGTGGGA
TGGAGTAGTTATTTAAGTCGACAGAGAGGTCAAGAGAAAGGCGTGCACTTGTATTTCTGTAGTGGCTTGCATTGGAATTT
GGAACTGGCTAGCGTTGGTACTTGGAATGTTTTACAGGAGATGAAGTGTTGCTTGGATATTCCCTTGACTAGTACTATTT
ATTGCCATTTAAGATATGTTTTGGGGCCCCAAAATTTTAGGGGCCCTGTGCCATCGCACAGGCTGCACCTGCCTGCCATA
CGGGCCTGCACAGGCTGCACCTGCCTGCCATACGGGCCTGCGTATAACTAGGTTGCTAGTTTTATCCCCCTAATATAAAC
TATATAACACAAAAATTATACCGTCTGAAAATGAAACATCTGAAGTTTATATTGGTATATGTTTTGTAATATATGACTTG
TATTAGGTTGGTCAAATTGATGACCTAGGGATACACGCATGCCCTGTAAACTGAGAGAGAGGTAGTAGTACTCTTACTCG
GCTAACTTCTCCTTGCCACCATGCAAAATGACCGAATTAAGACGACCAAGTTACTATCGTCAGTGTTGGGTCTCATTGAC
CTTTAGGTAGTCAAAAGCTGGAAGATTAATACTGCATCACATTT
>chr7B_16
---------------CAATTTGTTTTGCACGAATCTCAACACCCTAGATCCCATGGACAACAATTTAGATGAGACATCAC
TAACTCGTCTACATAATTAGCAAATCCGAACAAAAAATTGCAATTAAACATTTCATGAAATGGCAACTCTGTCAGGCCAG
GGGGTCCTTTTTTAGCACTACCGTGCCAGTGAATCCAACTTATGCATCGGAGCAACATGCGCCTGTCCCAAGGAATGTAG
TCTAGCGGGACAAGTT----------------------------------------------------------------
------------------------------------------------------------GCTAGGAAGGCGTCCAATCG
TCTTATTTTTGTGACGATGCCTATTCCATAGGTTTTCTTTTTCATTTCCTTCGTACACCCTTTGTAATTGTTTATTGAGT
AAAGTCTGTTTTAAACCCTCGTCAAAATCAAACCCGAACCTTCAATGCCCTGAAATCGACACTCTGCAGTCTTTGATCCT
AGTCTATCTCAACCCTAAACCGGTCTTGACTGGTTTGTCACGCTAGGAAAATAATGATCCCGGCC-GGATCACTCTCTAC
TCTCATTGACTACATGGGTCCGCATGTCATATCCATCTTCTTTCCCATAATT-TTTATCTCTCTCCCCAAGAGCTGAAAA
TAAATGATGACTGGAACAATAATACAAGGTTTGCCACGGCTTAGTTGAAATCAGTGGACACCCTGAACCGTGGCATATCT
ATATTGTACTGTCAGAACAAAGAAAGAAACGAATATTACAACCAAACAAAAAGAAGATATACACAGGGTAGTAATATTGG
ATAGTAATTAGTACAGGGCAATAATATTTGGAGACTAATAATCATGACATTTAACCATAACC-----AA-TCTTGAACTT
---TAATACCATAAATCCAGTATAAAATGGCCTGTCCGTGATGTTTTCCTTCAGAACTCGCAGAGCAAAGCA-------G
ACAAGTCTTTCCTTCAATACAACAACTATCTAAGATGAGGACTAGCCAGATGTTGCTCTTGTTGATCGCCTTCCTTGTCC
TAGCATCAGGTACCCATTTGTTCATGTACTACGTTCCTTCAAGATCTCGTCCAAACAAATCTTGGCTAAGTTCTGATCTT
CCCTTTTCCTCATGGTGAGATTTTGCA-GATGTGCCAACGAAGGCGTCAGCGGGCGTTGAAGGAATCCCTTGTACGACAA
GCATTATCCCGTCGCCAAAGCCATGTGATAGCAATACCTGCAATCAGGCATGCATCGACCGTGTGTGGGT---CGGCGGA
TATGGCGAGTGTGTTGCGGGGGCGTGTAAGTGCCAGCAGTGCACATACATTCCTCCCAAAAATGGAAACTAATTAGCTAT
GATTGGAAGTCATGTTCAACTGAATAATGTGATGAGATCGTAAATGGTGTAGCAACAAGGTTGTT-CACCGATAAGCCGT
ATGAAGAACTATGAAGTAT-----------------------------------AGAGATATGATGTTGACACTTAAAAC
TGTGGTATATGATGTTAACACTTGAATTATCCGTATGATAGTAC-TACTAGAAAATTGATTCGGTAAAATAAC-ACACCA
AGACATTAGCCTTGCTTTTAGACGAAAAAC--TATACTCCTTCGGGTAGTACATTGTGTCGGCTCATCAGATGGAGAGTG
CCCTACATGGTTGTGACTCGTGAGTTGTACTAGTACTG------------------------------------------
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-------------------------------------------------------------------------TTACTCG
GCTAACTTCTCCTTGCCACCATGCAA--TGACCCAATTAAGACCACCAAGATACTAGCGTCACTGCTGGGTTTCATTGGC
CTTTAG--------------------------------------
>chr7D_369
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-----------------------------------------------------ACAACTGGCTGGGAAGGTGTCCAATCG
TCTTATTTTTGTGACGATGCCTATTCCATAGGTTTTCTTTTTCATTTCCTTCGTATACCCTTTGTAATTGTTTATTGAGT
AAAGTCTGTTTTAAACATTGAATTCATATGG-------CCTTCAATGCCCTGAAATCGACACCCTGCAGTCTTTGATCCT
AGTCTATCTCAACCCTAAACCGGTCTTGACTGGTTTGTCACGCTAGGAAAATAATGATCCCGCCCGGAATCACTCTCTAC
TCTTACTGACTGCATGGGTCCACATGTCATATCCATCTTCTTTCTCATAATG-TTTATCTCTCTCCACAAGAGCTGAAAA
TAAATGATGACTGGAACAATAATACAATGTTTGCCACGACCTAGTCGAAATCAGTGGACACCTTGAACCGTGACATATCT
ATACTATATGGTTAGAACGAAAAACGAAACGAATATAACAACCAAACAAAAAGAAGATATACACAGGGTAGTAATATTGG
ATAGTAATTATTACCGGGCAACAATATTTGGAGACTAATAATCATGACATTTAATTATCACCT----AA-TCTCGTACTT
---TAGTACCATAAATCCAGTATAAAATGGCCTGTCCGTGATGTTTTCCTTCAGAACTCGCAGAGCAAAGCAACGATC-G
CCAAGTCTTTCCTTCAATACAACGACTATCTAAGATGAGGAGTAGCCAGATGTTGCTCCTGGCGATCGCCTTCCTTGCCC
TAGCATCAGGTACCCATTTGTTCAC-TACTACGTTCCTTCAAAATCTCGTCCAAACAAATAATGGCCAAGTTCTGATCTT
CCCTTTTCCTCATGGTGAGATTTTGCA-GATGTGGCAACGGAGGCGTCAGTGGGCGTTGAAGGAATCCCTTGTACGACAA
GCATTATCCCGTCGCCAAAGCCATGTGATAACAATAGCTGCAATCAGGCATGCATCGACCGTGTGTGGGT---CGGCGGA
TATGGCGAGTGTGTTGCGGGGGCGTGCAAGTGCCAGCAGTGCACATACATTCCTCCCAAAAATGGAAACTGATTAGCTAT
GATTGGATGTCATGTTCAACTGAATAATGTGATGAGATCGTAAATGGTGTAGCAACAAGGTTGTTG-ACCGATAAGCCGT
ATGAAGAACGATGAATTTTGTCTTGCTTCTTGAATTATCAGAGACTATAAAGTGAGATATATGATGTTAATACTTAAAAC
TGTGGTATATGATGTTAACACT---------CGTATGATAGTAC-TACTAGAAAAAGGATTTGGTAAAAAAAAAACACCA
ACACATTAGCTTTGCTTTTAGACGAAAGAC--TA--CTCCTTGGGGTAGTACATTGTATCGGCTCATCAGATGGAGAGTG
CCCTGCATGGTTGTGACTCGTGAGTTGTACTAGTACTG------------------------------------------
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-------------------------------------------------------------------------TTACTCG
GCTAA-TTCTCCTTGCCACCATGCAAAATGACCCAATTAAGACGACCAAGTTACTATCGTCAGTGATGGGTCTCATTGGC
CTTTAGGTGGTCAAAAGCTGGAATATTAATACTGCATCACATTT
>chr7B_528
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----------------------------------------------------AAATTGACACTCTGCAGTCTTTGATCCT
GGTCTATCTCAACCCTAAACCGGTCTTGACTGGTTTGTCACGCTAGGAAAATAATGATCCCGGACGGGATCACTCTCTAC
TCTCACTGACTGCATGGGTCCGCATGTCATATCCATCTTCTTTCCCATAATTTTTTATCTCTCTCCGCAAGAGCTGAAAA
TAAATGGTCACTGGAACAATAATACAAGGTTTGCCACGCCTTAGTCGAAATCAGTGGACACCCTGAACCGTAGCATATAT
ATTCTATACTGTCAGAACAAAAAACGAAACGAATATTACAACCAAACAAAAAGAAGATATACACAGGGTAGTAATATTGG
ATAGTAATTATTACAGGGCAACAATATTTGGAGACTAATAATCATGACATTTAATCATAGCC-----AA-TCTTGTACTT
---TAATACCATAAATCCGGTATAAAATGGCCTGTCCGTGATGTTTTCCTTCAGAACTCACAGAGCAAAGCAACGATC-G
ACAAGTATTTCCTTCAATACAACAAGTATCTAAGATGAGGACTAGCCAGATGTTGCTCCTGGCCATCGCCTTCCTTGTCC
TAGCATCAGGTACCCATTTGTTCATGTACTACGTTCCTTCAAAATCTCGTCCAAACAAATAATGGCCAAGTTCTGATCTT
CCCTTTATCTCATGGTGAGATTTTGCAGGATGTGGCAACGGAGGCGTCAGTGGGCGTTGAAGGAATCCCTTGTACGACAA
GCATTATCCCGTCGCCAAAGCCATGTGATAACAAAAGCTGCAATCAGGCATGCATCGACCGTGTGTGGGT---CGGCGGA
TATGGCGAGTGTGTTGCGGGGGCGTGCAAGTGCCAGCAGTGCACATACATTCCTCCCAAAAATGGAAACTAATTAGCTAT
GATTGGATGTCATGTTCAACTGAATAATGTGATGAGATCGTAAATGGTGTAGCAACAAGGTTGTT-CACAGATAAGCCGT
ATGAAGAACGGTGAATTTTGTCTTGCTTCTTAAATTATCAGAGACTATAAAGGGAGATATATGATGTTT-CACTTAAAAC
TGTGGTTTATGATGTTAACACTTGAATCATCCGTATGATAGTACTTACTAGAAAAAGGATCTGGTAAAAAAAA--CACCA
AGACATTAGCTTTGCTTTTAGACGAAAAAC--TATACTCCTTCGGGTAGTACATTGTATCGGCCCATCAGATGGAGAGTG
CTCTGCATGGTTGTAACTCGTGAGTTGTACGAGTAC--------------------------------------------
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>chrUn_843
AAAAA---------------------------------------------------------------------------
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-------------------------------------------------------GATATACATAAGCGAATAATATTGG
ATAGTAATTACTACGGGACAATAATATTTGGATACTAATAATTAATAAAATTGATTATAATATCATAAA-TCTTGTACTT
---TGATACCATAAATCCAGTATAAAATGGCATGT-CGTGATGTTCTCCTTCAGAACTCACAAAGCAAGGCAACCATTTG
ACAAGTCTTTCC-TCAATACAACAACTATCTAAGATGAGGACTAGCCAGATGTTGCTCTTGATGACGGCCTTCCTTGTCC
TAGCATCAGGTACCCATTTATTCATGTAATATGTTCCTTCAAAATCTTG-CCCAACAAATAATGGCCAAGTTTTGATCTT
TCCTTTTCCTCATGGTGGGATTTTGCA-GATGCGGTAACAAAGGCGTCAGCGGCCGTTGAAGGAGACCCCTGTGTGTCAA
GCATTATCCCATCACCAAAGCCATGTGATAATAAAAGCTGCAATAAGGCATGCATCGACCACCTGATGTGGAGCGGCGGA
CATGGCGAGTGTGTTGCGGAGGGGTGCAAGTGCCTGGATTGCGTT-------------AAAATGGATACTATTTAGCTAG
GATCGGATGTCATGTTCAACTGAATAACGTAACGAGATTATAAATTGTGTAGCAACAAGGTTGTT-CTCTGATAAGCCAT
ATGAAGAATGATGAATTTTATCTTGCTTCTT-------------------------------------------------
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>chr6A_843
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-------------------------------------------------AAAGAAGATATACATAAGCGAATAATATTGG
ATAGTAATTACTATGGGACAATAATATTTGGATACTAATAATTAATAAAATTGATTATAGTATCATAAA-TCTTGTACTT
---TAATACCATAAATCCAGTATAAAATGGCATGT-CGTGATGTTCTCCTTCAGAACTCACAAAGCAAGGCAACCATTTG
ACAAGTCTTTCCTTCAATACAACAACTATCTAAGATGAGGACTAGCCAGATGTTGCTCTTGATCGCGGCCTTCCTTGTCC
TAGCATCAGGTACCCATTTATTCATGTAATATGTTCCTTCAAAATCTTG-CGCAACAAATAATGGCCAAGTTTTGATCTT
CCCTTTTCCTCATGGTGGGATTTTGCA-GATGTGGTAACAAAGGCGTCAGCGGCCGTTGAAGGAGACCCCTGTGTGTCAA
GCATTATCCCATAACCAAAGCCATGTGATAATAAAAGCTGCAATAAGGCATGCATCGACCACCTTATGTGGAGCGGTGGA
CATGGCGAGTGTGTTGCGGAGGGGTGCAAGTGCCTGGATTGCGTT-------------AAAATGGATACTATTTAGCTAG
GACCGGATGTCATGTTTAACTAAATAAAGTAACGAGATCATAAATTGTGTACCAACAAGATTGTT-CTCTGATAAGCCAT
ATGAAGAATGATGAATTTCATCTTGCTTCTTGATTTATCTGATATTATAAAGTGAGCTATATGATTTTTACA--------
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>chr7A_1802
GTATAATA------------------------------------------------------------------------
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---------------------------------------------------------------------CAGGGCCATAC
CTGAGAATTCAGAGGCCCGGTGTAAAATAGCACGAAATGAGGCCCTTTAGATAGAAAAATACTCCCTCCGTCTAATAATA
TAAGATGTTTTGTAAACTAACATAGCTTGCTAAAATGTCTTATATTTTGGGACGGAAGGATGATTTATTATATATTTAGC
ATACTATAAACATAATCTTCCCAATAATAATCCACCTTAGCGGTGATTTATAGCTTACAAAAATGTTTTATATTGTGGGA
CGGAGTAGTTATTTAAGTCGACAGAGAGGTCAAGAGAAAGGCGTGCACTTGTGTTTCTGTAGTGGCTTGCATTGGAATTT
GGAACTGGCTAGCGTTGGTACTTGGAATGTTTTACAGGAGATGAAGTGTTGCTTGGATATTCCGTTGACTAATACTATTT
ATTGCCATTTAAGATATGTTCTGGGGCCCCAAAAATTTAGGGGCCCTGTGCCATGGCACAGGCTGCACCTGCCTGCCATA
CGGGCCTAGTATAA------------------------------------------------------------------
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>SNPs
S-S-SSS-SSSSSSS-------------------S----------------SS-S---S---------------------
-------------S------------S----------------------------------S------S-------SS--
--------------------------------S--SS-----------S---------S---------------------
------SS-SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----------S-----------
----------------------S--S-------------------------S-----------------S-----S----
------------------------S-S-----------------------------------------------------
------------------S------------SS-------S------------------S--------------------
----S----------------------------S----------------------------------------------
-----------------S--------------------------------------S-----------------------
------------------------------------------------------------------S-------------
--S------------------------------------------------------------------S----------
SSS------------------------------S----------------------------------------------
-------S----S-----------------------------------S-------------------------------
----------------------S-------S----S---------S-------------S--------------------
----------------------------------S------S-----------------S--------------------
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-------------------------------------------------------------------------------S
---------S---S---------------------------------------------------S-----S--------
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S-------------------------------------------------------------------------------
------------------------------SS----------------------------S------------------S
--------------------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---
---------S------------S---------------------------------------------------------
-----S----------------------------S---------------------S-----------------------
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S---------------------------------------------------S---------------------------
---------------------------------------------------------------S-------S--------
--------------------S-------------S-------------------S-------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
---------------------------------S-------------------------------S------------S-
--------S--------------S--------------------
>forward_674
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--------------TGGGTCCGCATGTCATATCG----------------------------------------------
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>reverse_1822
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-------------------------------------------------------------CGTATAACCAGGGCCGTAC
C-------------------------------------------------------------------------------
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